2024-07-13 22:23:12,316 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 22:23:12,634 Running on GPU
2024-07-13 22:23:27,061 Found 6 citations for tools or databases
2024-07-13 22:23:27,061 Query 1/1: UBP25_CJ143 (length 1163)
2024-07-13 22:23:27,518 Sleeping for 5s. Reason: PENDING
2024-07-13 22:23:32,957 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:23:39,369 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:23:46,781 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:23:56,208 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:24:06,620 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:24:17,047 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:24:26,493 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:24:34,926 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:24:42,365 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:24:52,780 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:25:00,203 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:25:07,620 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:25:15,039 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:25:24,456 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:25:32,878 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:25:45,168 Sleeping for 9s. Reason: PENDING
2024-07-13 22:25:54,591 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:26:04,013 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:26:11,444 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:26:21,873 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:26:29,290 Sleeping for 5s. Reason: RUNNING
2024-07-13 22:26:34,711 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:26:42,152 Sleeping for 5s. Reason: RUNNING
2024-07-13 22:26:47,565 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:26:54,990 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:27:07,479 Setting max_seq=508, max_extra_seq=1729
2024-07-13 22:31:05,962 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66 pTM=0.497 ipTM=0.254
2024-07-13 22:31:37,874 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67 pTM=0.507 ipTM=0.284 tol=6.57
2024-07-13 22:32:09,961 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.4 pTM=0.511 ipTM=0.289 tol=3.54
2024-07-13 22:32:42,136 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.2 pTM=0.507 ipTM=0.269 tol=4.96
2024-07-13 22:33:14,390 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.5 pTM=0.507 ipTM=0.274 tol=3.29
2024-07-13 22:33:46,656 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.5 pTM=0.503 ipTM=0.264 tol=3.09
2024-07-13 22:34:18,962 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.6 pTM=0.503 ipTM=0.263 tol=2.71
2024-07-13 22:34:51,303 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.4 pTM=0.503 ipTM=0.261 tol=4.1
2024-07-13 22:35:23,622 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.5 pTM=0.503 ipTM=0.268 tol=1.7
2024-07-13 22:35:55,952 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.5 pTM=0.502 ipTM=0.259 tol=2.18
2024-07-13 22:36:28,257 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.4 pTM=0.504 ipTM=0.269 tol=1.61
2024-07-13 22:37:00,545 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.4 pTM=0.501 ipTM=0.264 tol=1.32
2024-07-13 22:37:32,854 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.6 pTM=0.502 ipTM=0.261 tol=1.15
2024-07-13 22:38:05,201 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.5 pTM=0.501 ipTM=0.261 tol=1.35
2024-07-13 22:38:37,513 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.8 pTM=0.523 ipTM=0.265 tol=2.51
2024-07-13 22:39:09,797 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68 pTM=0.549 ipTM=0.265 tol=2.41
2024-07-13 22:39:42,089 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.8 pTM=0.542 ipTM=0.264 tol=1.3
2024-07-13 22:40:14,388 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.8 pTM=0.536 ipTM=0.271 tol=1.28
2024-07-13 22:40:46,677 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.6 pTM=0.534 ipTM=0.271 tol=1.17
2024-07-13 22:41:18,948 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.6 pTM=0.529 ipTM=0.259 tol=1.02
2024-07-13 22:41:51,231 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.6 pTM=0.522 ipTM=0.264 tol=1.02
2024-07-13 22:42:23,521 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.6 pTM=0.524 ipTM=0.269 tol=0.706
2024-07-13 22:42:55,818 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.6 pTM=0.526 ipTM=0.267 tol=0.858
2024-07-13 22:43:28,144 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.8 pTM=0.536 ipTM=0.262 tol=1.32
2024-07-13 22:44:00,489 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.8 pTM=0.541 ipTM=0.261 tol=1.1
2024-07-13 22:44:32,794 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.8 pTM=0.524 ipTM=0.265 tol=0.977
2024-07-13 22:45:05,070 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.6 pTM=0.515 ipTM=0.271 tol=1.46
2024-07-13 22:45:37,322 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.6 pTM=0.521 ipTM=0.258 tol=1.7
2024-07-13 22:46:09,568 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.6 pTM=0.53 ipTM=0.259 tol=1.4
2024-07-13 22:46:41,839 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.5 pTM=0.517 ipTM=0.261 tol=0.952
2024-07-13 22:47:14,139 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.6 pTM=0.508 ipTM=0.26 tol=1.72
2024-07-13 22:47:14,140 alphafold2_multimer_v3_model_1_seed_000 took 1162.7s (30 recycles)
2024-07-13 22:47:47,337 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.4 pTM=0.498 ipTM=0.253
2024-07-13 22:48:19,728 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.8 pTM=0.512 ipTM=0.372 tol=6.13
2024-07-13 22:48:52,098 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.2 pTM=0.513 ipTM=0.408 tol=4.98
2024-07-13 22:49:24,516 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.7 pTM=0.516 ipTM=0.409 tol=5.43
2024-07-13 22:49:56,950 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.9 pTM=0.52 ipTM=0.404 tol=4.67
2024-07-13 22:50:29,348 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.9 pTM=0.52 ipTM=0.391 tol=5
2024-07-13 22:51:01,733 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.9 pTM=0.517 ipTM=0.372 tol=3.71
2024-07-13 22:51:34,126 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.8 pTM=0.517 ipTM=0.377 tol=2.83
2024-07-13 22:52:06,510 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.9 pTM=0.517 ipTM=0.386 tol=1.76
2024-07-13 22:52:38,885 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.8 pTM=0.514 ipTM=0.378 tol=1.14
2024-07-13 22:53:11,278 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.7 pTM=0.514 ipTM=0.398 tol=0.782
2024-07-13 22:53:43,662 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.8 pTM=0.513 ipTM=0.387 tol=1.26
2024-07-13 22:54:16,093 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.8 pTM=0.515 ipTM=0.388 tol=1.42
2024-07-13 22:54:48,499 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.8 pTM=0.513 ipTM=0.382 tol=0.844
2024-07-13 22:55:20,914 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.8 pTM=0.516 ipTM=0.388 tol=0.619
2024-07-13 22:55:53,310 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.6 pTM=0.511 ipTM=0.368 tol=0.957
2024-07-13 22:56:25,708 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.7 pTM=0.514 ipTM=0.375 tol=0.852
2024-07-13 22:56:58,090 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.7 pTM=0.514 ipTM=0.378 tol=0.694
2024-07-13 22:57:30,464 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.6 pTM=0.514 ipTM=0.384 tol=1.04
2024-07-13 22:58:02,830 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.6 pTM=0.513 ipTM=0.377 tol=0.766
2024-07-13 22:58:35,206 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.5 pTM=0.511 ipTM=0.368 tol=1.42
2024-07-13 22:59:07,580 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.6 pTM=0.511 ipTM=0.371 tol=0.917
2024-07-13 22:59:39,965 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.6 pTM=0.515 ipTM=0.393 tol=1.73
2024-07-13 23:00:12,351 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.9 pTM=0.515 ipTM=0.396 tol=0.782
2024-07-13 23:00:44,721 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.7 pTM=0.513 ipTM=0.385 tol=0.867
2024-07-13 23:01:17,112 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.9 pTM=0.515 ipTM=0.401 tol=0.775
2024-07-13 23:01:49,512 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.8 pTM=0.515 ipTM=0.398 tol=1.29
2024-07-13 23:02:21,952 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.7 pTM=0.512 ipTM=0.37 tol=1.54
2024-07-13 23:02:54,363 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.8 pTM=0.515 ipTM=0.394 tol=1.09
2024-07-13 23:03:26,787 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.8 pTM=0.515 ipTM=0.389 tol=1
2024-07-13 23:03:59,214 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.8 pTM=0.513 ipTM=0.378 tol=0.828
2024-07-13 23:03:59,216 alphafold2_multimer_v3_model_2_seed_000 took 1004.3s (30 recycles)
2024-07-13 23:04:35,221 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.9 pTM=0.485 ipTM=0.24
2024-07-13 23:05:07,578 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.2 pTM=0.497 ipTM=0.322 tol=9.48
2024-07-13 23:05:39,880 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.1 pTM=0.504 ipTM=0.406 tol=8.36
2024-07-13 23:06:12,186 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.2 pTM=0.506 ipTM=0.407 tol=3.89
2024-07-13 23:06:44,501 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.5 pTM=0.509 ipTM=0.41 tol=2.67
2024-07-13 23:07:16,833 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.6 pTM=0.511 ipTM=0.409 tol=1.99
2024-07-13 23:07:49,170 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.6 pTM=0.511 ipTM=0.403 tol=1.43
2024-07-13 23:08:21,553 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.6 pTM=0.513 ipTM=0.399 tol=1.13
2024-07-13 23:08:53,940 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.7 pTM=0.513 ipTM=0.399 tol=0.723
2024-07-13 23:09:26,301 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.4 pTM=0.511 ipTM=0.393 tol=1.22
2024-07-13 23:09:58,642 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.5 pTM=0.512 ipTM=0.408 tol=1.05
2024-07-13 23:10:30,980 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.3 pTM=0.51 ipTM=0.401 tol=0.677
2024-07-13 23:11:03,367 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.5 pTM=0.511 ipTM=0.396 tol=0.839
2024-07-13 23:11:35,724 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.4 pTM=0.51 ipTM=0.392 tol=0.513
2024-07-13 23:12:08,094 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.5 pTM=0.512 ipTM=0.404 tol=0.711
2024-07-13 23:12:40,463 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.4 pTM=0.51 ipTM=0.393 tol=0.667
2024-07-13 23:13:12,865 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.4 pTM=0.509 ipTM=0.397 tol=0.697
2024-07-13 23:13:45,262 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.511 ipTM=0.404 tol=0.763
2024-07-13 23:14:17,657 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.5 pTM=0.51 ipTM=0.4 tol=0.781
2024-07-13 23:14:50,040 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.4 pTM=0.51 ipTM=0.402 tol=0.779
2024-07-13 23:15:22,417 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.4 pTM=0.51 ipTM=0.392 tol=0.602
2024-07-13 23:15:54,800 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.4 pTM=0.509 ipTM=0.393 tol=0.717
2024-07-13 23:16:27,177 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.4 pTM=0.511 ipTM=0.405 tol=0.833
2024-07-13 23:16:59,555 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.3 pTM=0.509 ipTM=0.399 tol=0.962
2024-07-13 23:17:31,934 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.4 pTM=0.51 ipTM=0.397 tol=0.836
2024-07-13 23:18:04,334 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.6 pTM=0.512 ipTM=0.406 tol=1.05
2024-07-13 23:18:36,711 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.4 pTM=0.512 ipTM=0.402 tol=0.971
2024-07-13 23:19:09,088 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.2 pTM=0.51 ipTM=0.379 tol=0.673
2024-07-13 23:19:41,506 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.4 pTM=0.513 ipTM=0.397 tol=0.929
2024-07-13 23:20:13,877 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.4 pTM=0.513 ipTM=0.394 tol=1.27
2024-07-13 23:20:46,288 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.6 pTM=0.518 ipTM=0.4 tol=1.02
2024-07-13 23:20:46,290 alphafold2_multimer_v3_model_3_seed_000 took 1003.4s (30 recycles)
2024-07-13 23:21:19,518 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65 pTM=0.503 ipTM=0.247
2024-07-13 23:21:51,809 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.9 pTM=0.534 ipTM=0.295 tol=15.9
2024-07-13 23:22:24,122 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.2 pTM=0.503 ipTM=0.284 tol=10.3
2024-07-13 23:22:56,435 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.3 pTM=0.51 ipTM=0.286 tol=4.46
2024-07-13 23:23:28,780 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.7 pTM=0.517 ipTM=0.288 tol=3.1
2024-07-13 23:24:01,077 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.2 pTM=0.513 ipTM=0.28 tol=1.95
2024-07-13 23:24:33,387 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.1 pTM=0.512 ipTM=0.266 tol=1.88
2024-07-13 23:25:05,686 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.1 pTM=0.514 ipTM=0.262 tol=1.46
2024-07-13 23:25:37,970 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.7 pTM=0.512 ipTM=0.257 tol=1.24
2024-07-13 23:26:10,239 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.4 pTM=0.51 ipTM=0.256 tol=1.99
2024-07-13 23:26:42,534 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.6 pTM=0.511 ipTM=0.254 tol=2.4
2024-07-13 23:27:14,801 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.2 pTM=0.508 ipTM=0.254 tol=2.5
2024-07-13 23:27:47,083 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.7 pTM=0.511 ipTM=0.25 tol=3.11
2024-07-13 23:28:19,329 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.8 pTM=0.51 ipTM=0.245 tol=3.31
2024-07-13 23:28:51,597 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.9 pTM=0.517 ipTM=0.239 tol=1.7
2024-07-13 23:29:23,796 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.9 pTM=0.55 ipTM=0.242 tol=2.15
2024-07-13 23:29:55,994 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.2 pTM=0.569 ipTM=0.245 tol=4.96
2024-07-13 23:30:28,176 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.574 ipTM=0.25 tol=2.83
2024-07-13 23:31:00,385 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.9 pTM=0.574 ipTM=0.241 tol=1.98
2024-07-13 23:31:32,620 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.2 pTM=0.583 ipTM=0.245 tol=1.77
2024-07-13 23:32:04,838 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.9 pTM=0.575 ipTM=0.244 tol=3.09
2024-07-13 23:32:37,070 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.2 pTM=0.586 ipTM=0.239 tol=2.95
2024-07-13 23:33:09,282 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67 pTM=0.581 ipTM=0.234 tol=2.38
2024-07-13 23:33:41,501 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.3 pTM=0.588 ipTM=0.241 tol=1.12
2024-07-13 23:34:13,713 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67 pTM=0.579 ipTM=0.24 tol=1.22
2024-07-13 23:34:45,927 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.2 pTM=0.587 ipTM=0.242 tol=0.888
2024-07-13 23:35:18,152 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.1 pTM=0.582 ipTM=0.244 tol=0.988
2024-07-13 23:35:50,393 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.9 pTM=0.584 ipTM=0.246 tol=1.25
2024-07-13 23:36:22,673 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.1 pTM=0.587 ipTM=0.237 tol=1.14
2024-07-13 23:36:54,919 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.9 pTM=0.578 ipTM=0.238 tol=1.45
2024-07-13 23:37:27,159 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.2 pTM=0.584 ipTM=0.241 tol=1.15
2024-07-13 23:37:27,160 alphafold2_multimer_v3_model_4_seed_000 took 1000.0s (30 recycles)
2024-07-13 23:38:00,348 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64 pTM=0.496 ipTM=0.282
2024-07-13 23:38:32,745 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67 pTM=0.509 ipTM=0.357 tol=10.1
2024-07-13 23:39:05,121 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.6 pTM=0.514 ipTM=0.381 tol=6.79
2024-07-13 23:39:37,490 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.9 pTM=0.519 ipTM=0.394 tol=3.25
2024-07-13 23:40:09,853 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.9 pTM=0.518 ipTM=0.388 tol=1.22
2024-07-13 23:40:42,236 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.9 pTM=0.517 ipTM=0.371 tol=2.54
2024-07-13 23:41:14,613 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.9 pTM=0.516 ipTM=0.369 tol=3.97
2024-07-13 23:41:46,996 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.8 pTM=0.517 ipTM=0.365 tol=2.86
2024-07-13 23:42:19,376 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68 pTM=0.517 ipTM=0.365 tol=1.32
2024-07-13 23:42:51,748 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.9 pTM=0.515 ipTM=0.36 tol=1.26
2024-07-13 23:43:24,136 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.9 pTM=0.517 ipTM=0.373 tol=0.938
2024-07-13 23:43:56,557 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.9 pTM=0.518 ipTM=0.374 tol=1.34
2024-07-13 23:44:28,951 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.9 pTM=0.516 ipTM=0.363 tol=1.01
2024-07-13 23:45:01,322 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.8 pTM=0.515 ipTM=0.361 tol=1.55
2024-07-13 23:45:33,713 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.9 pTM=0.519 ipTM=0.374 tol=1.12
2024-07-13 23:46:06,080 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.9 pTM=0.518 ipTM=0.373 tol=1.34
2024-07-13 23:46:38,461 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68 pTM=0.518 ipTM=0.372 tol=0.856
2024-07-13 23:47:10,837 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68 pTM=0.519 ipTM=0.38 tol=0.765
2024-07-13 23:47:43,226 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.9 pTM=0.518 ipTM=0.374 tol=1.23
2024-07-13 23:48:15,593 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.9 pTM=0.518 ipTM=0.373 tol=0.706
2024-07-13 23:48:47,950 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.8 pTM=0.517 ipTM=0.365 tol=3.8
2024-07-13 23:49:20,333 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.9 pTM=0.517 ipTM=0.366 tol=3.94
2024-07-13 23:49:52,717 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.9 pTM=0.52 ipTM=0.387 tol=4.04
2024-07-13 23:50:25,072 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.8 pTM=0.517 ipTM=0.367 tol=3.68
2024-07-13 23:50:57,433 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.9 pTM=0.516 ipTM=0.37 tol=1.17
2024-07-13 23:51:29,798 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.9 pTM=0.519 ipTM=0.379 tol=0.914
2024-07-13 23:52:02,138 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68 pTM=0.519 ipTM=0.38 tol=1.15
2024-07-13 23:52:34,473 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.8 pTM=0.517 ipTM=0.36 tol=2.31
2024-07-13 23:53:06,858 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68 pTM=0.52 ipTM=0.383 tol=2.86
2024-07-13 23:53:39,204 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.8 pTM=0.52 ipTM=0.375 tol=1.81
2024-07-13 23:54:11,554 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.9 pTM=0.518 ipTM=0.361 tol=2.49
2024-07-13 23:54:11,555 alphafold2_multimer_v3_model_5_seed_000 took 1003.6s (30 recycles)
2024-07-13 23:54:12,373 reranking models by 'multimer' metric
2024-07-13 23:54:34,645 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 23:56:47,532 Relaxation took 155.2s
2024-07-13 23:56:47,532 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.6 pTM=0.518 ipTM=0.4
2024-07-13 23:58:26,749 Relaxation took 99.2s
2024-07-13 23:58:26,749 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.8 pTM=0.513 ipTM=0.378
2024-07-13 23:59:41,726 Relaxation took 75.0s
2024-07-13 23:59:41,726 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.9 pTM=0.518 ipTM=0.361
2024-07-14 00:01:14,784 Relaxation took 93.1s
2024-07-14 00:01:14,785 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.2 pTM=0.584 ipTM=0.241
2024-07-14 00:16:39,617 Relaxation took 924.8s
2024-07-14 00:16:39,617 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.6 pTM=0.508 ipTM=0.26
2024-07-14 00:16:42,273 Done