2024-07-13 22:36:12,156 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 22:36:12,466 Running on GPU
2024-07-13 22:36:32,355 Found 6 citations for tools or databases
2024-07-13 22:36:32,355 Query 1/1: UBP29_RPA49 (length 1341)
2024-07-13 22:36:32,799 Sleeping for 8s. Reason: PENDING
2024-07-13 22:36:41,246 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:36:50,666 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:36:59,144 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:37:05,568 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:37:11,984 Sleeping for 5s. Reason: RUNNING
2024-07-13 22:37:17,408 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:37:24,860 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:37:31,291 Sleeping for 5s. Reason: RUNNING
2024-07-13 22:37:36,716 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:37:47,139 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:37:53,552 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:38:03,982 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:38:13,426 Sleeping for 5s. Reason: RUNNING
2024-07-13 22:38:18,840 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:38:25,263 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:38:32,679 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:38:43,266 Sleeping for 6s. Reason: PENDING
2024-07-13 22:38:49,730 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:38:56,169 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:39:06,603 Sleeping for 7s. Reason: RUNNING
2024-07-13 22:39:14,021 Sleeping for 6s. Reason: RUNNING
2024-07-13 22:39:20,461 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:39:28,888 Sleeping for 10s. Reason: RUNNING
2024-07-13 22:39:39,308 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:39:47,752 Sleeping for 8s. Reason: RUNNING
2024-07-13 22:39:56,183 Sleeping for 9s. Reason: RUNNING
2024-07-13 22:40:09,082 Setting max_seq=508, max_extra_seq=2048
2024-07-13 22:44:26,252 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.9 pTM=0.393 ipTM=0.228
2024-07-13 22:45:13,345 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.6 pTM=0.382 ipTM=0.224 tol=15.1
2024-07-13 22:46:00,562 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.8 pTM=0.383 ipTM=0.224 tol=7.93
2024-07-13 22:46:47,818 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.3 pTM=0.402 ipTM=0.223 tol=12.4
2024-07-13 22:47:35,134 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.8 pTM=0.383 ipTM=0.221 tol=7.35
2024-07-13 22:48:22,460 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.9 pTM=0.382 ipTM=0.219 tol=5.37
2024-07-13 22:49:09,775 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.1 pTM=0.386 ipTM=0.23 tol=4.47
2024-07-13 22:49:57,114 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52 pTM=0.386 ipTM=0.228 tol=6.67
2024-07-13 22:50:44,474 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.1 pTM=0.384 ipTM=0.222 tol=7.2
2024-07-13 22:51:31,828 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.1 pTM=0.386 ipTM=0.223 tol=6.88
2024-07-13 22:52:19,183 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.2 pTM=0.382 ipTM=0.217 tol=2.13
2024-07-13 22:53:06,521 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.9 pTM=0.385 ipTM=0.224 tol=3.18
2024-07-13 22:53:53,871 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.1 pTM=0.383 ipTM=0.218 tol=3.88
2024-07-13 22:54:41,237 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52 pTM=0.385 ipTM=0.223 tol=3.96
2024-07-13 22:55:28,635 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.1 pTM=0.382 ipTM=0.217 tol=6.95
2024-07-13 22:56:16,023 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.1 pTM=0.382 ipTM=0.216 tol=7.49
2024-07-13 22:57:03,416 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.2 pTM=0.382 ipTM=0.217 tol=1.94
2024-07-13 22:57:50,798 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.9 pTM=0.384 ipTM=0.221 tol=6.62
2024-07-13 22:58:38,169 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.3 pTM=0.384 ipTM=0.22 tol=6.43
2024-07-13 22:59:25,520 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52 pTM=0.384 ipTM=0.222 tol=2.17
2024-07-13 23:00:12,867 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.2 pTM=0.384 ipTM=0.222 tol=2.37
2024-07-13 23:01:00,246 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.1 pTM=0.383 ipTM=0.218 tol=1.92
2024-07-13 23:01:47,630 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.3 pTM=0.381 ipTM=0.215 tol=2.17
2024-07-13 23:02:35,007 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.2 pTM=0.381 ipTM=0.215 tol=5.91
2024-07-13 23:03:22,430 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.1 pTM=0.381 ipTM=0.217 tol=2.4
2024-07-13 23:04:09,838 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.1 pTM=0.383 ipTM=0.217 tol=5.84
2024-07-13 23:04:57,189 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.2 pTM=0.385 ipTM=0.221 tol=2.73
2024-07-13 23:05:44,536 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.1 pTM=0.384 ipTM=0.215 tol=6.64
2024-07-13 23:06:31,839 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52 pTM=0.383 ipTM=0.219 tol=6.66
2024-07-13 23:07:19,187 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52 pTM=0.383 ipTM=0.216 tol=7.11
2024-07-13 23:08:06,539 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.1 pTM=0.382 ipTM=0.214 tol=3.4
2024-07-13 23:08:06,541 alphafold2_multimer_v3_model_1_seed_000 took 1635.5s (30 recycles)
2024-07-13 23:08:54,963 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.3 pTM=0.398 ipTM=0.218
2024-07-13 23:09:42,372 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.4 pTM=0.393 ipTM=0.226 tol=11.3
2024-07-13 23:10:29,812 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.392 ipTM=0.22 tol=6.09
2024-07-13 23:11:17,252 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.8 pTM=0.391 ipTM=0.21 tol=6.71
2024-07-13 23:12:04,710 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.1 pTM=0.389 ipTM=0.206 tol=5.03
2024-07-13 23:12:52,176 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54 pTM=0.387 ipTM=0.205 tol=3.27
2024-07-13 23:13:39,679 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.1 pTM=0.387 ipTM=0.205 tol=2.43
2024-07-13 23:14:27,159 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.8 pTM=0.386 ipTM=0.205 tol=3.94
2024-07-13 23:15:14,658 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.9 pTM=0.387 ipTM=0.204 tol=3.47
2024-07-13 23:16:02,148 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.2 pTM=0.387 ipTM=0.2 tol=3.5
2024-07-13 23:16:49,613 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54 pTM=0.388 ipTM=0.205 tol=3.79
2024-07-13 23:17:37,068 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.1 pTM=0.389 ipTM=0.209 tol=4.57
2024-07-13 23:18:24,515 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.1 pTM=0.389 ipTM=0.207 tol=2.23
2024-07-13 23:19:11,973 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.1 pTM=0.389 ipTM=0.208 tol=3.09
2024-07-13 23:19:59,448 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54 pTM=0.388 ipTM=0.204 tol=2
2024-07-13 23:20:46,904 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.2 pTM=0.388 ipTM=0.205 tol=2.12
2024-07-13 23:21:34,351 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.3 pTM=0.389 ipTM=0.206 tol=2.08
2024-07-13 23:22:21,778 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.1 pTM=0.388 ipTM=0.204 tol=1.67
2024-07-13 23:23:09,209 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.2 pTM=0.389 ipTM=0.206 tol=1.74
2024-07-13 23:23:56,613 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.2 pTM=0.389 ipTM=0.206 tol=1.62
2024-07-13 23:24:44,029 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54 pTM=0.39 ipTM=0.21 tol=1.57
2024-07-13 23:25:31,432 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.1 pTM=0.389 ipTM=0.205 tol=1.74
2024-07-13 23:26:18,844 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.1 pTM=0.387 ipTM=0.202 tol=6.61
2024-07-13 23:27:06,274 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.1 pTM=0.387 ipTM=0.205 tol=4.59
2024-07-13 23:27:53,692 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54 pTM=0.388 ipTM=0.206 tol=7.67
2024-07-13 23:28:41,105 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54 pTM=0.389 ipTM=0.207 tol=6.39
2024-07-13 23:29:28,472 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.2 pTM=0.392 ipTM=0.21 tol=2.08
2024-07-13 23:30:15,869 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.9 pTM=0.389 ipTM=0.204 tol=1.87
2024-07-13 23:31:03,256 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54 pTM=0.389 ipTM=0.207 tol=1.83
2024-07-13 23:31:50,654 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.39 ipTM=0.209 tol=1.6
2024-07-13 23:32:38,091 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.1 pTM=0.391 ipTM=0.208 tol=2.13
2024-07-13 23:32:38,092 alphafold2_multimer_v3_model_2_seed_000 took 1470.5s (30 recycles)
2024-07-13 23:33:26,715 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.2 pTM=0.385 ipTM=0.203
2024-07-13 23:34:14,326 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.2 pTM=0.379 ipTM=0.203 tol=16.6
2024-07-13 23:35:01,847 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.5 pTM=0.394 ipTM=0.245 tol=15.9
2024-07-13 23:35:49,384 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.9 pTM=0.386 ipTM=0.228 tol=5.13
2024-07-13 23:36:36,920 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.8 pTM=0.39 ipTM=0.239 tol=3.96
2024-07-13 23:37:24,485 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.8 pTM=0.389 ipTM=0.243 tol=3.96
2024-07-13 23:38:12,072 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.7 pTM=0.386 ipTM=0.228 tol=3.31
2024-07-13 23:38:59,632 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.5 pTM=0.391 ipTM=0.248 tol=4.57
2024-07-13 23:39:47,265 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.4 pTM=0.385 ipTM=0.226 tol=3.09
2024-07-13 23:40:34,844 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.6 pTM=0.391 ipTM=0.247 tol=3.24
2024-07-13 23:41:22,459 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.5 pTM=0.382 ipTM=0.215 tol=3.59
2024-07-13 23:42:10,059 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.6 pTM=0.384 ipTM=0.227 tol=3.79
2024-07-13 23:42:57,696 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.4 pTM=0.388 ipTM=0.237 tol=4.11
2024-07-13 23:43:45,251 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.9 pTM=0.397 ipTM=0.267 tol=3.11
2024-07-13 23:44:32,862 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.8 pTM=0.395 ipTM=0.259 tol=2.78
2024-07-13 23:45:20,445 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53 pTM=0.401 ipTM=0.283 tol=3.76
2024-07-13 23:46:07,996 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.2 pTM=0.398 ipTM=0.269 tol=3.58
2024-07-13 23:46:55,592 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.7 pTM=0.402 ipTM=0.28 tol=6.76
2024-07-13 23:47:43,210 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.2 pTM=0.398 ipTM=0.268 tol=5.72
2024-07-13 23:48:30,771 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.4 pTM=0.404 ipTM=0.287 tol=2.96
2024-07-13 23:49:18,350 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.5 pTM=0.404 ipTM=0.285 tol=2.16
2024-07-13 23:50:05,904 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.5 pTM=0.408 ipTM=0.304 tol=2.21
2024-07-13 23:50:53,462 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.8 pTM=0.409 ipTM=0.304 tol=1.88
2024-07-13 23:51:41,028 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.7 pTM=0.407 ipTM=0.299 tol=1.99
2024-07-13 23:52:28,597 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.9 pTM=0.413 ipTM=0.314 tol=2.72
2024-07-13 23:53:16,111 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.9 pTM=0.414 ipTM=0.317 tol=2.58
2024-07-13 23:54:03,651 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54 pTM=0.413 ipTM=0.315 tol=1.61
2024-07-13 23:54:51,161 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54 pTM=0.415 ipTM=0.322 tol=1.46
2024-07-13 23:55:38,686 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54 pTM=0.413 ipTM=0.316 tol=1.73
2024-07-13 23:56:26,213 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.9 pTM=0.413 ipTM=0.317 tol=1.61
2024-07-13 23:57:13,773 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.9 pTM=0.411 ipTM=0.306 tol=1.38
2024-07-13 23:57:13,775 alphafold2_multimer_v3_model_3_seed_000 took 1474.6s (30 recycles)
2024-07-13 23:58:02,317 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.1 pTM=0.414 ipTM=0.297
2024-07-13 23:58:49,787 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.6 pTM=0.417 ipTM=0.271 tol=12.7
2024-07-13 23:59:37,339 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.2 pTM=0.386 ipTM=0.208 tol=7.64
2024-07-14 00:00:24,911 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.7 pTM=0.382 ipTM=0.201 tol=7
2024-07-14 00:01:12,475 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.9 pTM=0.383 ipTM=0.202 tol=5.51
2024-07-14 00:02:00,000 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.6 pTM=0.387 ipTM=0.217 tol=9.56
2024-07-14 00:02:47,501 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.1 pTM=0.393 ipTM=0.237 tol=8.89
2024-07-14 00:03:34,989 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.2 pTM=0.391 ipTM=0.226 tol=10.6
2024-07-14 00:04:22,530 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.1 pTM=0.39 ipTM=0.226 tol=10
2024-07-14 00:05:10,072 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.2 pTM=0.385 ipTM=0.207 tol=8.73
2024-07-14 00:05:57,584 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.7 pTM=0.394 ipTM=0.235 tol=9.18
2024-07-14 00:06:45,069 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.2 pTM=0.398 ipTM=0.238 tol=8.74
2024-07-14 00:07:32,587 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.2 pTM=0.393 ipTM=0.23 tol=7.15
2024-07-14 00:08:20,111 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.8 pTM=0.396 ipTM=0.219 tol=9.9
2024-07-14 00:09:07,640 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.6 pTM=0.392 ipTM=0.228 tol=9.44
2024-07-14 00:09:55,194 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52 pTM=0.388 ipTM=0.216 tol=9.41
2024-07-14 00:10:42,737 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.8 pTM=0.39 ipTM=0.224 tol=8.08
2024-07-14 00:11:30,277 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.9 pTM=0.397 ipTM=0.213 tol=10.9
2024-07-14 00:12:17,797 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.4 pTM=0.392 ipTM=0.226 tol=10
2024-07-14 00:13:05,341 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.8 pTM=0.403 ipTM=0.218 tol=10.8
2024-07-14 00:13:52,847 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51.5 pTM=0.392 ipTM=0.228 tol=10.5
2024-07-14 00:14:40,352 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.5 pTM=0.4 ipTM=0.22 tol=9.82
2024-07-14 00:15:27,836 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.8 pTM=0.387 ipTM=0.212 tol=8.38
2024-07-14 00:16:15,337 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.9 pTM=0.388 ipTM=0.216 tol=9.29
2024-07-14 00:17:02,853 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.8 pTM=0.388 ipTM=0.22 tol=10.2
2024-07-14 00:17:50,412 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.3 pTM=0.389 ipTM=0.213 tol=9.96
2024-07-14 00:18:37,882 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.7 pTM=0.392 ipTM=0.223 tol=9.98
2024-07-14 00:19:25,400 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.8 pTM=0.389 ipTM=0.217 tol=9.04
2024-07-14 00:20:12,867 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.8 pTM=0.392 ipTM=0.229 tol=10.4
2024-07-14 00:21:00,343 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.1 pTM=0.401 ipTM=0.217 tol=8.46
2024-07-14 00:21:47,808 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.6 pTM=0.394 ipTM=0.233 tol=6.8
2024-07-14 00:21:47,809 alphafold2_multimer_v3_model_4_seed_000 took 1473.0s (30 recycles)
2024-07-14 00:22:36,393 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.1 pTM=0.38 ipTM=0.193
2024-07-14 00:23:23,940 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.1 pTM=0.382 ipTM=0.215 tol=13.4
2024-07-14 00:24:11,478 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.4 pTM=0.387 ipTM=0.237 tol=10.2
2024-07-14 00:24:59,054 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.4 pTM=0.38 ipTM=0.215 tol=10.5
2024-07-14 00:25:46,600 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.9 pTM=0.385 ipTM=0.233 tol=8.33
2024-07-14 00:26:34,180 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.2 pTM=0.386 ipTM=0.239 tol=5.09
2024-07-14 00:27:21,741 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.8 pTM=0.404 ipTM=0.297 tol=10.6
2024-07-14 00:28:09,287 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.6 pTM=0.396 ipTM=0.272 tol=8.09
2024-07-14 00:28:56,812 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.8 pTM=0.405 ipTM=0.299 tol=3.32
2024-07-14 00:29:44,305 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.7 pTM=0.397 ipTM=0.275 tol=4.41
2024-07-14 00:30:31,841 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.6 pTM=0.402 ipTM=0.292 tol=11.6
2024-07-14 00:31:19,401 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.6 pTM=0.391 ipTM=0.25 tol=9.29
2024-07-14 00:32:06,911 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.8 pTM=0.407 ipTM=0.302 tol=4.02
2024-07-14 00:32:54,464 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.4 pTM=0.39 ipTM=0.25 tol=10
2024-07-14 00:33:42,044 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.4 pTM=0.393 ipTM=0.259 tol=9.25
2024-07-14 00:34:33,492 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.3 pTM=0.387 ipTM=0.241 tol=9.19
2024-07-14 00:35:21,049 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.4 pTM=0.394 ipTM=0.261 tol=4.88
2024-07-14 00:36:08,657 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.4 pTM=0.391 ipTM=0.252 tol=7.87
2024-07-14 00:36:56,270 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.5 pTM=0.393 ipTM=0.258 tol=3.81
2024-07-14 00:37:43,909 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.4 pTM=0.384 ipTM=0.226 tol=2.84
2024-07-14 00:38:31,501 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.2 pTM=0.384 ipTM=0.229 tol=2.83
2024-07-14 00:39:19,111 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.3 pTM=0.381 ipTM=0.217 tol=3.81
2024-07-14 00:40:06,680 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.4 pTM=0.391 ipTM=0.248 tol=4.22
2024-07-14 00:40:54,296 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.4 pTM=0.386 ipTM=0.238 tol=3.06
2024-07-14 00:41:41,906 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.3 pTM=0.393 ipTM=0.257 tol=9.66
2024-07-14 00:42:29,533 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.3 pTM=0.387 ipTM=0.239 tol=9.24
2024-07-14 00:43:17,134 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.5 pTM=0.389 ipTM=0.246 tol=6.12
2024-07-14 00:44:04,754 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.4 pTM=0.388 ipTM=0.242 tol=3.74
2024-07-14 00:44:52,320 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.5 pTM=0.396 ipTM=0.268 tol=3.9
2024-07-14 00:45:39,900 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.2 pTM=0.391 ipTM=0.253 tol=4.04
2024-07-14 00:46:27,489 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.4 pTM=0.393 ipTM=0.256 tol=3.48
2024-07-14 00:46:27,490 alphafold2_multimer_v3_model_5_seed_000 took 1478.6s (30 recycles)
2024-07-14 00:46:28,568 reranking models by 'multimer' metric
2024-07-14 00:46:45,530 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-14 00:49:30,114 Relaxation took 181.5s
2024-07-14 00:49:30,114 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.9 pTM=0.411 ipTM=0.306
2024-07-14 00:52:43,051 Relaxation took 192.9s
2024-07-14 00:52:43,051 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.4 pTM=0.393 ipTM=0.256
2024-07-14 00:56:36,760 Relaxation took 233.7s
2024-07-14 00:56:36,760 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.6 pTM=0.394 ipTM=0.233
2024-07-14 00:59:41,017 Relaxation took 184.3s
2024-07-14 00:59:41,018 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.1 pTM=0.382 ipTM=0.214
2024-07-14 01:17:40,060 Relaxation took 1079.0s
2024-07-14 01:17:40,061 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.1 pTM=0.391 ipTM=0.208
2024-07-14 01:17:51,292 Done