2024-07-13 23:14:35,139 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 23:14:35,484 Running on GPU
2024-07-13 23:14:46,875 Found 6 citations for tools or databases
2024-07-13 23:14:46,875 Query 1/1: UCP5_CX6B1 (length 411)
2024-07-13 23:14:47,364 Sleeping for 8s. Reason: PENDING
2024-07-13 23:14:55,783 Sleeping for 6s. Reason: RUNNING
2024-07-13 23:15:02,221 Sleeping for 10s. Reason: RUNNING
2024-07-13 23:15:12,646 Sleeping for 7s. Reason: RUNNING
2024-07-13 23:15:20,064 Sleeping for 7s. Reason: RUNNING
2024-07-13 23:15:27,487 Sleeping for 5s. Reason: RUNNING
2024-07-13 23:15:32,911 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:15:42,348 Sleeping for 8s. Reason: RUNNING
2024-07-13 23:15:50,774 Sleeping for 7s. Reason: RUNNING
2024-07-13 23:15:58,180 Sleeping for 6s. Reason: RUNNING
2024-07-13 23:16:06,292 Sleeping for 6s. Reason: PENDING
2024-07-13 23:16:12,712 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:16:22,147 Sleeping for 10s. Reason: RUNNING
2024-07-13 23:16:32,565 Sleeping for 7s. Reason: RUNNING
2024-07-13 23:16:39,991 Sleeping for 8s. Reason: RUNNING
2024-07-13 23:16:48,429 Sleeping for 7s. Reason: RUNNING
2024-07-13 23:17:03,851 Setting max_seq=508, max_extra_seq=2048
2024-07-13 23:20:30,674 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.646 ipTM=0.382
2024-07-13 23:20:34,643 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.1 pTM=0.682 ipTM=0.357 tol=2.78
2024-07-13 23:20:38,615 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.4 pTM=0.673 ipTM=0.34 tol=1.26
2024-07-13 23:20:42,585 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.3 pTM=0.68 ipTM=0.348 tol=1.1
2024-07-13 23:20:46,552 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.6 pTM=0.673 ipTM=0.329 tol=0.496
2024-07-13 23:20:46,553 alphafold2_multimer_v3_model_1_seed_000 took 175.6s (4 recycles)
2024-07-13 23:20:50,639 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.1 pTM=0.615 ipTM=0.279
2024-07-13 23:20:54,601 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.658 ipTM=0.352 tol=2.62
2024-07-13 23:20:58,568 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.8 pTM=0.658 ipTM=0.333 tol=1.28
2024-07-13 23:21:02,529 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.2 pTM=0.671 ipTM=0.347 tol=0.727
2024-07-13 23:21:06,493 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67 pTM=0.67 ipTM=0.344 tol=0.297
2024-07-13 23:21:06,493 alphafold2_multimer_v3_model_2_seed_000 took 19.8s (4 recycles)
2024-07-13 23:21:10,585 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.4 pTM=0.629 ipTM=0.299
2024-07-13 23:21:14,558 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.7 pTM=0.693 ipTM=0.469 tol=2.84
2024-07-13 23:21:18,527 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.8 pTM=0.661 ipTM=0.34 tol=1.33
2024-07-13 23:21:22,497 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.4 pTM=0.664 ipTM=0.37 tol=0.902
2024-07-13 23:21:26,468 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.4 pTM=0.667 ipTM=0.352 tol=0.93
2024-07-13 23:21:30,436 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.5 pTM=0.678 ipTM=0.413 tol=0.73
2024-07-13 23:21:34,406 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.8 pTM=0.664 ipTM=0.343 tol=1.06
2024-07-13 23:21:38,377 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.5 pTM=0.666 ipTM=0.366 tol=0.982
2024-07-13 23:21:42,350 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.8 pTM=0.653 ipTM=0.332 tol=0.927
2024-07-13 23:21:46,321 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.5 pTM=0.667 ipTM=0.382 tol=0.91
2024-07-13 23:21:50,293 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.7 pTM=0.662 ipTM=0.354 tol=0.913
2024-07-13 23:21:54,258 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.3 pTM=0.683 ipTM=0.46 tol=0.696
2024-07-13 23:21:58,227 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.8 pTM=0.663 ipTM=0.36 tol=0.754
2024-07-13 23:22:02,200 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.3 pTM=0.673 ipTM=0.419 tol=0.829
2024-07-13 23:22:06,171 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.5 pTM=0.667 ipTM=0.374 tol=1.04
2024-07-13 23:22:10,141 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.2 pTM=0.67 ipTM=0.402 tol=1.13
2024-07-13 23:22:14,111 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.9 pTM=0.662 ipTM=0.356 tol=1.06
2024-07-13 23:22:18,083 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.8 pTM=0.666 ipTM=0.384 tol=1
2024-07-13 23:22:22,053 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.1 pTM=0.665 ipTM=0.363 tol=1.05
2024-07-13 23:22:26,027 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.2 pTM=0.673 ipTM=0.403 tol=1.04
2024-07-13 23:22:29,998 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.7 pTM=0.664 ipTM=0.382 tol=0.954
2024-07-13 23:22:33,973 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.9 pTM=0.688 ipTM=0.453 tol=0.938
2024-07-13 23:22:37,948 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.8 pTM=0.669 ipTM=0.384 tol=0.912
2024-07-13 23:22:41,922 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.685 ipTM=0.465 tol=0.929
2024-07-13 23:22:45,894 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.4 pTM=0.667 ipTM=0.381 tol=0.715
2024-07-13 23:22:49,867 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.6 pTM=0.674 ipTM=0.434 tol=0.806
2024-07-13 23:22:53,839 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.8 pTM=0.649 ipTM=0.351 tol=0.768
2024-07-13 23:22:57,813 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.3 pTM=0.683 ipTM=0.432 tol=0.878
2024-07-13 23:23:01,785 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.1 pTM=0.664 ipTM=0.376 tol=0.944
2024-07-13 23:23:05,758 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68 pTM=0.687 ipTM=0.486 tol=0.88
2024-07-13 23:23:09,737 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.8 pTM=0.69 ipTM=0.446 tol=0.952
2024-07-13 23:23:09,738 alphafold2_multimer_v3_model_3_seed_000 took 123.1s (30 recycles)
2024-07-13 23:23:13,834 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.1 pTM=0.662 ipTM=0.435
2024-07-13 23:23:17,811 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.4 pTM=0.674 ipTM=0.352 tol=4.23
2024-07-13 23:23:21,784 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.4 pTM=0.656 ipTM=0.325 tol=1.1
2024-07-13 23:23:25,757 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.2 pTM=0.662 ipTM=0.321 tol=0.71
2024-07-13 23:23:29,731 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.6 pTM=0.675 ipTM=0.342 tol=0.444
2024-07-13 23:23:29,732 alphafold2_multimer_v3_model_4_seed_000 took 19.9s (4 recycles)
2024-07-13 23:23:33,832 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.1 pTM=0.652 ipTM=0.391
2024-07-13 23:23:37,813 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.1 pTM=0.727 ipTM=0.605 tol=7
2024-07-13 23:23:41,791 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.5 pTM=0.697 ipTM=0.426 tol=3.57
2024-07-13 23:23:45,765 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.9 pTM=0.678 ipTM=0.394 tol=1.18
2024-07-13 23:23:49,745 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.2 pTM=0.687 ipTM=0.364 tol=1
2024-07-13 23:23:53,722 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.2 pTM=0.694 ipTM=0.415 tol=0.953
2024-07-13 23:23:57,700 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.9 pTM=0.687 ipTM=0.343 tol=0.881
2024-07-13 23:24:01,675 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.9 pTM=0.675 ipTM=0.335 tol=0.764
2024-07-13 23:24:05,655 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.68 ipTM=0.325 tol=0.601
2024-07-13 23:24:09,630 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.4 pTM=0.681 ipTM=0.358 tol=0.583
2024-07-13 23:24:13,607 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.2 pTM=0.68 ipTM=0.316 tol=0.611
2024-07-13 23:24:17,585 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.1 pTM=0.684 ipTM=0.345 tol=0.577
2024-07-13 23:24:21,560 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.7 pTM=0.673 ipTM=0.307 tol=0.623
2024-07-13 23:24:25,535 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66 pTM=0.674 ipTM=0.339 tol=0.525
2024-07-13 23:24:29,514 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.9 pTM=0.676 ipTM=0.311 tol=0.591
2024-07-13 23:24:33,489 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.9 pTM=0.671 ipTM=0.309 tol=0.573
2024-07-13 23:24:37,465 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.8 pTM=0.68 ipTM=0.346 tol=0.805
2024-07-13 23:24:41,442 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.2 pTM=0.675 ipTM=0.308 tol=0.554
2024-07-13 23:24:45,418 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.2 pTM=0.684 ipTM=0.363 tol=0.513
2024-07-13 23:24:49,395 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.5 pTM=0.68 ipTM=0.321 tol=0.642
2024-07-13 23:24:53,373 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.6 pTM=0.679 ipTM=0.326 tol=0.586
2024-07-13 23:24:57,353 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.8 pTM=0.689 ipTM=0.364 tol=0.964
2024-07-13 23:25:01,330 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.2 pTM=0.687 ipTM=0.332 tol=0.676
2024-07-13 23:25:05,308 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.8 pTM=0.69 ipTM=0.376 tol=0.545
2024-07-13 23:25:09,288 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.1 pTM=0.687 ipTM=0.326 tol=0.441
2024-07-13 23:25:09,288 alphafold2_multimer_v3_model_5_seed_000 took 99.4s (24 recycles)
2024-07-13 23:25:09,407 reranking models by 'multimer' metric
2024-07-13 23:25:20,435 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 23:25:41,930 Relaxation took 32.5s
2024-07-13 23:25:41,930 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.8 pTM=0.69 ipTM=0.446
2024-07-13 23:25:51,762 Relaxation took 9.8s
2024-07-13 23:25:51,762 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67 pTM=0.67 ipTM=0.344
2024-07-13 23:26:02,488 Relaxation took 10.7s
2024-07-13 23:26:02,488 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.6 pTM=0.675 ipTM=0.342
2024-07-13 23:26:27,043 Relaxation took 24.6s
2024-07-13 23:26:27,043 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.1 pTM=0.687 ipTM=0.326
2024-07-13 23:26:36,536 Relaxation took 9.5s
2024-07-13 23:26:36,536 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.6 pTM=0.673 ipTM=0.329
2024-07-13 23:26:37,479 Done