2024-07-13 23:57:49,944 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 23:57:50,288 Running on GPU
2024-07-13 23:58:01,732 Found 6 citations for tools or databases
2024-07-13 23:58:01,732 Query 1/1: URP2_TUSC1 (length 876)
2024-07-13 23:58:02,204 Sleeping for 7s. Reason: PENDING
2024-07-13 23:58:09,621 Sleeping for 5s. Reason: RUNNING
2024-07-13 23:58:15,056 Sleeping for 5s. Reason: RUNNING
2024-07-13 23:58:20,487 Sleeping for 10s. Reason: RUNNING
2024-07-13 23:58:30,910 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:58:40,361 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:58:49,790 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:58:59,236 Sleeping for 8s. Reason: RUNNING
2024-07-13 23:59:07,648 Sleeping for 8s. Reason: RUNNING
2024-07-13 23:59:16,073 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:59:25,495 Sleeping for 9s. Reason: RUNNING
2024-07-13 23:59:36,458 Sleeping for 8s. Reason: PENDING
2024-07-13 23:59:44,895 Sleeping for 5s. Reason: RUNNING
2024-07-13 23:59:50,322 Sleeping for 7s. Reason: RUNNING
2024-07-13 23:59:57,754 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:00:07,201 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:00:16,618 Sleeping for 7s. Reason: RUNNING
2024-07-14 00:00:26,405 Setting max_seq=508, max_extra_seq=2048
2024-07-14 00:03:32,093 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.3 pTM=0.644 ipTM=0.183
2024-07-14 00:03:47,997 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.6 pTM=0.607 ipTM=0.172 tol=6.5
2024-07-14 00:04:03,939 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.4 pTM=0.586 ipTM=0.188 tol=8.34
2024-07-14 00:04:19,905 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.4 pTM=0.591 ipTM=0.193 tol=8.29
2024-07-14 00:04:35,916 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.4 pTM=0.584 ipTM=0.173 tol=3.22
2024-07-14 00:04:51,951 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.6 pTM=0.594 ipTM=0.207 tol=2.05
2024-07-14 00:05:07,994 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.4 pTM=0.587 ipTM=0.185 tol=3.31
2024-07-14 00:05:24,055 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.6 pTM=0.589 ipTM=0.192 tol=3.39
2024-07-14 00:05:40,123 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.4 pTM=0.586 ipTM=0.187 tol=1.69
2024-07-14 00:05:56,199 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.7 pTM=0.588 ipTM=0.177 tol=3.66
2024-07-14 00:06:12,284 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.4 pTM=0.584 ipTM=0.187 tol=3.55
2024-07-14 00:06:28,378 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.6 pTM=0.586 ipTM=0.185 tol=1.5
2024-07-14 00:06:44,478 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.6 pTM=0.584 ipTM=0.193 tol=1.22
2024-07-14 00:07:00,553 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.4 pTM=0.588 ipTM=0.18 tol=1.21
2024-07-14 00:07:16,651 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.5 pTM=0.588 ipTM=0.186 tol=1.36
2024-07-14 00:07:32,761 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.587 ipTM=0.199 tol=1.33
2024-07-14 00:07:48,861 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.5 pTM=0.584 ipTM=0.196 tol=1.58
2024-07-14 00:08:04,971 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.4 pTM=0.585 ipTM=0.185 tol=1.84
2024-07-14 00:08:21,082 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.7 pTM=0.584 ipTM=0.179 tol=1.69
2024-07-14 00:08:37,173 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.5 pTM=0.585 ipTM=0.171 tol=1.87
2024-07-14 00:08:53,279 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.6 pTM=0.581 ipTM=0.174 tol=1.29
2024-07-14 00:09:09,380 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.5 pTM=0.584 ipTM=0.158 tol=1.19
2024-07-14 00:09:25,475 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.4 pTM=0.584 ipTM=0.16 tol=1.67
2024-07-14 00:09:41,574 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.3 pTM=0.583 ipTM=0.171 tol=1.77
2024-07-14 00:09:57,683 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.4 pTM=0.581 ipTM=0.182 tol=1.51
2024-07-14 00:10:13,807 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.6 pTM=0.586 ipTM=0.166 tol=1.3
2024-07-14 00:10:29,961 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.6 pTM=0.585 ipTM=0.161 tol=1.38
2024-07-14 00:10:46,096 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.5 pTM=0.589 ipTM=0.168 tol=1.38
2024-07-14 00:11:02,203 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.4 pTM=0.583 ipTM=0.169 tol=1.38
2024-07-14 00:11:18,304 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.6 pTM=0.587 ipTM=0.189 tol=1.57
2024-07-14 00:11:34,414 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.6 pTM=0.581 ipTM=0.186 tol=1.35
2024-07-14 00:11:34,415 alphafold2_multimer_v3_model_1_seed_000 took 623.1s (30 recycles)
2024-07-14 00:11:51,000 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67 pTM=0.645 ipTM=0.161
2024-07-14 00:12:07,156 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.1 pTM=0.596 ipTM=0.149 tol=4.37
2024-07-14 00:12:23,326 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.2 pTM=0.583 ipTM=0.143 tol=6.96
2024-07-14 00:12:39,480 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.2 pTM=0.581 ipTM=0.14 tol=2.72
2024-07-14 00:12:55,666 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.2 pTM=0.576 ipTM=0.14 tol=2.01
2024-07-14 00:13:11,851 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.6 pTM=0.578 ipTM=0.14 tol=2.43
2024-07-14 00:13:28,022 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.8 pTM=0.581 ipTM=0.144 tol=1.87
2024-07-14 00:13:44,190 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.8 pTM=0.579 ipTM=0.146 tol=1.12
2024-07-14 00:14:00,358 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.7 pTM=0.577 ipTM=0.144 tol=1.02
2024-07-14 00:14:16,538 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.8 pTM=0.58 ipTM=0.141 tol=1.14
2024-07-14 00:14:32,711 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.6 pTM=0.577 ipTM=0.141 tol=1.17
2024-07-14 00:14:48,895 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.8 pTM=0.578 ipTM=0.141 tol=0.981
2024-07-14 00:15:05,074 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.6 pTM=0.578 ipTM=0.143 tol=1.17
2024-07-14 00:15:21,233 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.6 pTM=0.577 ipTM=0.142 tol=1.48
2024-07-14 00:15:37,420 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.7 pTM=0.581 ipTM=0.146 tol=1.4
2024-07-14 00:15:53,612 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.8 pTM=0.577 ipTM=0.141 tol=0.915
2024-07-14 00:16:09,791 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.8 pTM=0.581 ipTM=0.146 tol=1.57
2024-07-14 00:16:25,963 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.8 pTM=0.576 ipTM=0.141 tol=1.28
2024-07-14 00:16:42,147 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.8 pTM=0.582 ipTM=0.143 tol=1.14
2024-07-14 00:16:58,305 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.6 pTM=0.578 ipTM=0.143 tol=1.15
2024-07-14 00:17:14,485 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.8 pTM=0.578 ipTM=0.139 tol=0.947
2024-07-14 00:17:30,664 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.578 ipTM=0.141 tol=1.22
2024-07-14 00:17:46,834 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.6 pTM=0.578 ipTM=0.144 tol=1.29
2024-07-14 00:18:02,990 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.4 pTM=0.577 ipTM=0.141 tol=0.919
2024-07-14 00:18:19,168 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.6 pTM=0.578 ipTM=0.146 tol=1.14
2024-07-14 00:18:35,343 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.7 pTM=0.578 ipTM=0.143 tol=0.634
2024-07-14 00:18:51,507 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.8 pTM=0.578 ipTM=0.142 tol=0.88
2024-07-14 00:19:07,694 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.9 pTM=0.581 ipTM=0.142 tol=1.21
2024-07-14 00:19:23,842 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.6 pTM=0.578 ipTM=0.141 tol=0.917
2024-07-14 00:19:40,024 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.6 pTM=0.581 ipTM=0.142 tol=1.66
2024-07-14 00:19:56,186 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.7 pTM=0.579 ipTM=0.143 tol=1.08
2024-07-14 00:19:56,187 alphafold2_multimer_v3_model_2_seed_000 took 501.3s (30 recycles)
2024-07-14 00:20:12,850 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.4 pTM=0.652 ipTM=0.188
2024-07-14 00:20:29,038 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69 pTM=0.611 ipTM=0.164 tol=6.02
2024-07-14 00:20:45,226 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.61 ipTM=0.15 tol=4.09
2024-07-14 00:21:01,397 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.1 pTM=0.612 ipTM=0.154 tol=4.25
2024-07-14 00:21:17,568 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.1 pTM=0.604 ipTM=0.153 tol=2.06
2024-07-14 00:21:33,744 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.1 pTM=0.606 ipTM=0.155 tol=2
2024-07-14 00:21:49,912 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.8 pTM=0.6 ipTM=0.152 tol=2.03
2024-07-14 00:22:06,097 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.5 pTM=0.594 ipTM=0.146 tol=3.54
2024-07-14 00:22:22,293 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.8 pTM=0.593 ipTM=0.149 tol=3.74
2024-07-14 00:22:38,478 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.8 pTM=0.594 ipTM=0.146 tol=2.66
2024-07-14 00:22:54,660 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.7 pTM=0.59 ipTM=0.146 tol=1.76
2024-07-14 00:23:10,879 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.9 pTM=0.588 ipTM=0.145 tol=1.42
2024-07-14 00:23:27,085 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.8 pTM=0.594 ipTM=0.143 tol=2.63
2024-07-14 00:23:43,297 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.7 pTM=0.588 ipTM=0.146 tol=2.33
2024-07-14 00:23:59,507 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.8 pTM=0.595 ipTM=0.147 tol=4.39
2024-07-14 00:24:15,715 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.5 pTM=0.586 ipTM=0.144 tol=4.67
2024-07-14 00:24:31,918 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.9 pTM=0.591 ipTM=0.143 tol=2.27
2024-07-14 00:24:48,106 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.7 pTM=0.586 ipTM=0.144 tol=1.4
2024-07-14 00:25:04,316 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.1 pTM=0.593 ipTM=0.146 tol=1.91
2024-07-14 00:25:20,508 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.9 pTM=0.585 ipTM=0.164 tol=5.5
2024-07-14 00:25:36,714 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.9 pTM=0.595 ipTM=0.144 tol=6.44
2024-07-14 00:25:52,931 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69 pTM=0.59 ipTM=0.141 tol=2.05
2024-07-14 00:26:09,129 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.8 pTM=0.594 ipTM=0.151 tol=2.78
2024-07-14 00:26:25,332 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.8 pTM=0.59 ipTM=0.145 tol=2.19
2024-07-14 00:26:41,511 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.7 pTM=0.595 ipTM=0.149 tol=1.38
2024-07-14 00:26:57,723 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.9 pTM=0.588 ipTM=0.142 tol=2.96
2024-07-14 00:27:13,917 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.8 pTM=0.596 ipTM=0.151 tol=3.66
2024-07-14 00:27:30,133 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.9 pTM=0.592 ipTM=0.146 tol=2.91
2024-07-14 00:27:46,328 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.8 pTM=0.595 ipTM=0.15 tol=2.4
2024-07-14 00:28:02,545 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.9 pTM=0.588 ipTM=0.143 tol=2.15
2024-07-14 00:28:18,754 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.9 pTM=0.594 ipTM=0.149 tol=2.57
2024-07-14 00:28:18,755 alphafold2_multimer_v3_model_3_seed_000 took 502.1s (30 recycles)
2024-07-14 00:28:37,665 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.8 pTM=0.656 ipTM=0.265
2024-07-14 00:28:53,837 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.8 pTM=0.623 ipTM=0.149 tol=11.4
2024-07-14 00:29:09,989 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.6 pTM=0.614 ipTM=0.152 tol=5.12
2024-07-14 00:29:26,141 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.5 pTM=0.608 ipTM=0.152 tol=2.97
2024-07-14 00:29:42,276 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.4 pTM=0.601 ipTM=0.153 tol=1.47
2024-07-14 00:29:58,419 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.4 pTM=0.602 ipTM=0.153 tol=0.82
2024-07-14 00:30:14,553 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.3 pTM=0.599 ipTM=0.156 tol=2.11
2024-07-14 00:30:30,689 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.1 pTM=0.595 ipTM=0.157 tol=1.81
2024-07-14 00:30:46,809 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.1 pTM=0.596 ipTM=0.162 tol=1.76
2024-07-14 00:31:02,943 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.4 pTM=0.6 ipTM=0.159 tol=2.62
2024-07-14 00:31:19,081 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.1 pTM=0.594 ipTM=0.172 tol=3.19
2024-07-14 00:31:35,233 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.3 pTM=0.604 ipTM=0.173 tol=1.53
2024-07-14 00:31:51,376 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.2 pTM=0.595 ipTM=0.173 tol=1.45
2024-07-14 00:32:07,525 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.4 pTM=0.603 ipTM=0.164 tol=1.68
2024-07-14 00:32:23,672 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.1 pTM=0.59 ipTM=0.169 tol=1.4
2024-07-14 00:32:39,817 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.4 pTM=0.602 ipTM=0.165 tol=3.1
2024-07-14 00:32:55,957 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.1 pTM=0.59 ipTM=0.201 tol=3.47
2024-07-14 00:33:12,106 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67.3 pTM=0.596 ipTM=0.166 tol=2.29
2024-07-14 00:33:28,236 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.2 pTM=0.602 ipTM=0.171 tol=2.7
2024-07-14 00:33:47,558 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.1 pTM=0.6 ipTM=0.164 tol=2.15
2024-07-14 00:34:03,690 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.4 pTM=0.594 ipTM=0.169 tol=1.02
2024-07-14 00:34:19,844 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.4 pTM=0.598 ipTM=0.173 tol=1.19
2024-07-14 00:34:35,992 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.2 pTM=0.584 ipTM=0.173 tol=1.28
2024-07-14 00:34:52,099 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.1 pTM=0.594 ipTM=0.17 tol=0.887
2024-07-14 00:35:08,224 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67 pTM=0.591 ipTM=0.169 tol=1.51
2024-07-14 00:35:24,361 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.4 pTM=0.6 ipTM=0.163 tol=1.62
2024-07-14 00:35:40,498 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.2 pTM=0.591 ipTM=0.17 tol=1.33
2024-07-14 00:35:56,644 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.4 pTM=0.599 ipTM=0.164 tol=1.08
2024-07-14 00:36:12,787 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.2 pTM=0.585 ipTM=0.166 tol=1.68
2024-07-14 00:36:28,927 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.3 pTM=0.598 ipTM=0.158 tol=1.84
2024-07-14 00:36:45,069 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.3 pTM=0.598 ipTM=0.167 tol=1.23
2024-07-14 00:36:45,070 alphafold2_multimer_v3_model_4_seed_000 took 503.5s (30 recycles)
2024-07-14 00:37:03,684 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.9 pTM=0.587 ipTM=0.139
2024-07-14 00:37:19,903 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.8 pTM=0.584 ipTM=0.146 tol=5.84
2024-07-14 00:37:36,128 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.585 ipTM=0.154 tol=3.74
2024-07-14 00:37:52,338 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.2 pTM=0.585 ipTM=0.139 tol=2.36
2024-07-14 00:38:08,558 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.1 pTM=0.583 ipTM=0.147 tol=2.56
2024-07-14 00:38:24,767 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.1 pTM=0.586 ipTM=0.15 tol=1.88
2024-07-14 00:38:40,979 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.2 pTM=0.587 ipTM=0.147 tol=2.79
2024-07-14 00:38:57,188 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.9 pTM=0.585 ipTM=0.148 tol=2.39
2024-07-14 00:39:13,398 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.2 pTM=0.585 ipTM=0.145 tol=1.93
2024-07-14 00:39:29,607 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.1 pTM=0.586 ipTM=0.145 tol=2.17
2024-07-14 00:39:45,820 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.1 pTM=0.585 ipTM=0.144 tol=1.63
2024-07-14 00:40:02,035 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.4 pTM=0.588 ipTM=0.146 tol=1.8
2024-07-14 00:40:18,254 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.2 pTM=0.589 ipTM=0.143 tol=2.03
2024-07-14 00:40:34,451 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.4 pTM=0.589 ipTM=0.148 tol=2.21
2024-07-14 00:40:50,662 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.5 pTM=0.593 ipTM=0.143 tol=1.87
2024-07-14 00:41:06,867 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.6 pTM=0.59 ipTM=0.147 tol=2.72
2024-07-14 00:41:23,064 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.4 pTM=0.59 ipTM=0.143 tol=2.09
2024-07-14 00:41:39,268 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.5 pTM=0.586 ipTM=0.149 tol=2.27
2024-07-14 00:41:55,482 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.6 pTM=0.589 ipTM=0.142 tol=1.78
2024-07-14 00:42:11,696 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.5 pTM=0.589 ipTM=0.146 tol=1.52
2024-07-14 00:42:27,924 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.6 pTM=0.589 ipTM=0.142 tol=2.04
2024-07-14 00:42:44,133 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.5 pTM=0.584 ipTM=0.146 tol=2.75
2024-07-14 00:43:00,334 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.3 pTM=0.586 ipTM=0.144 tol=2.31
2024-07-14 00:43:16,542 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.5 pTM=0.587 ipTM=0.146 tol=1.53
2024-07-14 00:43:32,729 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.6 pTM=0.586 ipTM=0.141 tol=2
2024-07-14 00:43:48,940 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.6 pTM=0.589 ipTM=0.147 tol=2.12
2024-07-14 00:44:05,150 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.6 pTM=0.588 ipTM=0.142 tol=2.24
2024-07-14 00:44:21,364 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.4 pTM=0.59 ipTM=0.147 tol=1.5
2024-07-14 00:44:37,565 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.5 pTM=0.591 ipTM=0.142 tol=2.62
2024-07-14 00:44:53,774 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.4 pTM=0.588 ipTM=0.148 tol=2.62
2024-07-14 00:45:09,979 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.4 pTM=0.591 ipTM=0.141 tol=1.64
2024-07-14 00:45:09,980 alphafold2_multimer_v3_model_5_seed_000 took 502.5s (30 recycles)
2024-07-14 00:45:10,464 reranking models by 'multimer' metric
2024-07-14 00:45:11,401 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-14 00:46:20,405 Relaxation took 69.9s
2024-07-14 00:46:20,405 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.6 pTM=0.581 ipTM=0.186
2024-07-14 00:47:53,897 Relaxation took 93.5s
2024-07-14 00:47:53,898 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.3 pTM=0.598 ipTM=0.167
2024-07-14 00:48:51,255 Relaxation took 57.4s
2024-07-14 00:48:51,255 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.9 pTM=0.594 ipTM=0.149
2024-07-14 00:49:19,679 Relaxation took 28.4s
2024-07-14 00:49:19,680 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.4 pTM=0.591 ipTM=0.141
2024-07-14 00:50:12,970 Relaxation took 53.3s
2024-07-14 00:50:12,970 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.7 pTM=0.579 ipTM=0.143
2024-07-14 00:50:14,957 Done