2024-07-14 00:26:28,732 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-14 00:26:29,038 Running on GPU
2024-07-14 00:26:37,353 Found 6 citations for tools or databases
2024-07-14 00:26:37,353 Query 1/1: VPK6_UBP44 (length 868)
2024-07-14 00:26:37,827 Sleeping for 7s. Reason: PENDING
2024-07-14 00:26:45,255 Sleeping for 10s. Reason: RUNNING
2024-07-14 00:26:55,673 Sleeping for 5s. Reason: RUNNING
2024-07-14 00:27:01,091 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:27:07,510 Sleeping for 10s. Reason: RUNNING
2024-07-14 00:27:17,943 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:27:24,354 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:27:30,766 Sleeping for 8s. Reason: RUNNING
2024-07-14 00:27:39,192 Sleeping for 10s. Reason: RUNNING
2024-07-14 00:27:49,604 Sleeping for 5s. Reason: RUNNING
2024-07-14 00:27:55,019 Sleeping for 8s. Reason: RUNNING
2024-07-14 00:28:03,438 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:28:12,857 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:28:22,288 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:28:28,699 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:28:35,114 Sleeping for 7s. Reason: RUNNING
2024-07-14 00:28:42,572 Sleeping for 8s. Reason: RUNNING
2024-07-14 00:28:50,996 Sleeping for 10s. Reason: RUNNING
2024-07-14 00:29:01,420 Sleeping for 8s. Reason: RUNNING
2024-07-14 00:29:09,838 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:29:19,266 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:29:28,682 Sleeping for 8s. Reason: RUNNING
2024-07-14 00:29:37,127 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:29:43,528 Sleeping for 7s. Reason: RUNNING
2024-07-14 00:29:53,285 Sleeping for 7s. Reason: PENDING
2024-07-14 00:30:00,700 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:30:07,106 Sleeping for 10s. Reason: RUNNING
2024-07-14 00:30:17,533 Sleeping for 5s. Reason: RUNNING
2024-07-14 00:30:22,954 Sleeping for 7s. Reason: RUNNING
2024-07-14 00:30:30,384 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:30:39,804 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:30:46,235 Sleeping for 9s. Reason: RUNNING
2024-07-14 00:30:55,664 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:31:02,064 Sleeping for 5s. Reason: RUNNING
2024-07-14 00:31:07,512 Sleeping for 6s. Reason: RUNNING
2024-07-14 00:31:17,980 Setting max_seq=508, max_extra_seq=2048
2024-07-14 00:34:38,806 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.5 pTM=0.487 ipTM=0.188
2024-07-14 00:34:55,786 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.7 pTM=0.482 ipTM=0.187 tol=15.5
2024-07-14 00:35:12,830 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.7 pTM=0.481 ipTM=0.196 tol=6.57
2024-07-14 00:35:29,910 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.5 pTM=0.483 ipTM=0.207 tol=5.59
2024-07-14 00:35:47,011 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.1 pTM=0.483 ipTM=0.207 tol=2.92
2024-07-14 00:36:04,138 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.8 pTM=0.484 ipTM=0.197 tol=5.43
2024-07-14 00:36:21,292 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.1 pTM=0.482 ipTM=0.193 tol=2.47
2024-07-14 00:36:38,446 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.4 pTM=0.483 ipTM=0.188 tol=2.1
2024-07-14 00:36:55,630 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.7 pTM=0.484 ipTM=0.195 tol=2.61
2024-07-14 00:37:12,822 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.8 pTM=0.482 ipTM=0.188 tol=2.95
2024-07-14 00:37:29,999 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.9 pTM=0.483 ipTM=0.193 tol=2.41
2024-07-14 00:37:47,173 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.1 pTM=0.482 ipTM=0.181 tol=1.41
2024-07-14 00:38:04,353 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.8 pTM=0.483 ipTM=0.191 tol=2.12
2024-07-14 00:38:21,544 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.4 pTM=0.481 ipTM=0.181 tol=1.96
2024-07-14 00:38:38,722 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.7 pTM=0.485 ipTM=0.202 tol=2.4
2024-07-14 00:38:55,918 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.3 pTM=0.483 ipTM=0.182 tol=3.78
2024-07-14 00:39:13,119 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.1 pTM=0.483 ipTM=0.187 tol=2.82
2024-07-14 00:39:30,306 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.5 pTM=0.481 ipTM=0.188 tol=3.12
2024-07-14 00:39:47,491 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.7 pTM=0.484 ipTM=0.192 tol=3.2
2024-07-14 00:40:04,680 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.479 ipTM=0.181 tol=3.18
2024-07-14 00:40:21,884 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.3 pTM=0.48 ipTM=0.186 tol=3.95
2024-07-14 00:40:39,095 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.2 pTM=0.48 ipTM=0.186 tol=2.75
2024-07-14 00:40:56,307 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.5 pTM=0.482 ipTM=0.19 tol=2.51
2024-07-14 00:41:13,514 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.5 pTM=0.482 ipTM=0.192 tol=2.62
2024-07-14 00:41:30,741 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.4 pTM=0.484 ipTM=0.197 tol=3.33
2024-07-14 00:41:47,962 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.6 pTM=0.486 ipTM=0.205 tol=7.14
2024-07-14 00:42:05,140 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.8 pTM=0.486 ipTM=0.202 tol=2.36
2024-07-14 00:42:22,351 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.7 pTM=0.486 ipTM=0.202 tol=3.95
2024-07-14 00:42:39,559 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.4 pTM=0.485 ipTM=0.201 tol=2.4
2024-07-14 00:42:56,747 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.1 pTM=0.484 ipTM=0.203 tol=2.5
2024-07-14 00:43:13,933 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.4 pTM=0.484 ipTM=0.201 tol=2.64
2024-07-14 00:43:13,935 alphafold2_multimer_v3_model_1_seed_000 took 655.1s (30 recycles)
2024-07-14 00:43:31,587 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.8 pTM=0.492 ipTM=0.172
2024-07-14 00:43:48,833 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.2 pTM=0.488 ipTM=0.172 tol=16.8
2024-07-14 00:44:06,088 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.4 pTM=0.489 ipTM=0.176 tol=8.52
2024-07-14 00:44:23,334 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.5 pTM=0.487 ipTM=0.175 tol=4.75
2024-07-14 00:44:40,581 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.8 pTM=0.488 ipTM=0.171 tol=6.59
2024-07-14 00:44:57,831 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.8 pTM=0.489 ipTM=0.18 tol=4.47
2024-07-14 00:45:15,083 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.2 pTM=0.49 ipTM=0.176 tol=2.88
2024-07-14 00:45:32,342 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.8 pTM=0.49 ipTM=0.18 tol=2.51
2024-07-14 00:45:49,630 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.9 pTM=0.491 ipTM=0.176 tol=1.51
2024-07-14 00:46:06,872 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.9 pTM=0.491 ipTM=0.183 tol=1.31
2024-07-14 00:46:24,126 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.8 pTM=0.489 ipTM=0.172 tol=1.76
2024-07-14 00:46:41,357 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.8 pTM=0.49 ipTM=0.173 tol=1.62
2024-07-14 00:46:58,608 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.7 pTM=0.488 ipTM=0.171 tol=3.67
2024-07-14 00:47:15,837 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.1 pTM=0.489 ipTM=0.176 tol=2.43
2024-07-14 00:47:33,074 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.1 pTM=0.488 ipTM=0.167 tol=1.36
2024-07-14 00:47:50,314 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.2 pTM=0.492 ipTM=0.182 tol=1.25
2024-07-14 00:48:07,559 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.1 pTM=0.491 ipTM=0.176 tol=1.06
2024-07-14 00:48:24,831 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.4 pTM=0.491 ipTM=0.186 tol=1.29
2024-07-14 00:48:42,074 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.4 pTM=0.489 ipTM=0.167 tol=2.07
2024-07-14 00:48:59,307 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.3 pTM=0.489 ipTM=0.173 tol=1.16
2024-07-14 00:49:16,550 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.2 pTM=0.488 ipTM=0.171 tol=1.25
2024-07-14 00:49:33,787 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.2 pTM=0.492 ipTM=0.186 tol=2.54
2024-07-14 00:49:51,037 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.3 pTM=0.49 ipTM=0.172 tol=1.41
2024-07-14 00:50:08,285 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.1 pTM=0.491 ipTM=0.174 tol=1.89
2024-07-14 00:50:25,501 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.1 pTM=0.49 ipTM=0.174 tol=1.13
2024-07-14 00:50:42,727 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.5 pTM=0.496 ipTM=0.192 tol=2.44
2024-07-14 00:50:59,959 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.3 pTM=0.49 ipTM=0.175 tol=2.83
2024-07-14 00:51:17,184 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.4 pTM=0.49 ipTM=0.173 tol=1.8
2024-07-14 00:51:34,408 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.4 pTM=0.491 ipTM=0.177 tol=1.37
2024-07-14 00:51:51,637 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.4 pTM=0.49 ipTM=0.181 tol=1.68
2024-07-14 00:52:08,868 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.3 pTM=0.488 ipTM=0.17 tol=0.943
2024-07-14 00:52:08,869 alphafold2_multimer_v3_model_2_seed_000 took 534.5s (30 recycles)
2024-07-14 00:52:26,536 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.6 pTM=0.472 ipTM=0.19
2024-07-14 00:52:43,739 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.6 pTM=0.474 ipTM=0.179 tol=11.6
2024-07-14 00:53:00,964 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.9 pTM=0.481 ipTM=0.177 tol=6.94
2024-07-14 00:53:18,185 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.4 pTM=0.488 ipTM=0.178 tol=3.37
2024-07-14 00:53:35,410 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.7 pTM=0.487 ipTM=0.179 tol=4.77
2024-07-14 00:53:52,684 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.2 pTM=0.496 ipTM=0.224 tol=5.41
2024-07-14 00:54:09,916 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.3 pTM=0.495 ipTM=0.196 tol=3.85
2024-07-14 00:54:27,149 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.6 pTM=0.492 ipTM=0.19 tol=4.71
2024-07-14 00:54:44,378 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.8 pTM=0.492 ipTM=0.186 tol=2.1
2024-07-14 00:55:01,599 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.8 pTM=0.492 ipTM=0.189 tol=2.72
2024-07-14 00:55:18,849 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.5 pTM=0.491 ipTM=0.187 tol=3
2024-07-14 00:55:36,077 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.8 pTM=0.491 ipTM=0.192 tol=1.94
2024-07-14 00:55:53,344 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.6 pTM=0.49 ipTM=0.19 tol=2.78
2024-07-14 00:56:10,584 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.9 pTM=0.49 ipTM=0.193 tol=2.17
2024-07-14 00:56:27,817 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.9 pTM=0.49 ipTM=0.186 tol=2
2024-07-14 00:56:45,086 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.1 pTM=0.494 ipTM=0.205 tol=2.01
2024-07-14 00:57:02,332 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.7 pTM=0.491 ipTM=0.192 tol=2.18
2024-07-14 00:57:19,564 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.7 pTM=0.491 ipTM=0.198 tol=2.06
2024-07-14 00:57:36,834 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.6 pTM=0.492 ipTM=0.193 tol=1.8
2024-07-14 00:57:54,072 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.7 pTM=0.49 ipTM=0.193 tol=1.49
2024-07-14 00:58:11,313 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.7 pTM=0.49 ipTM=0.188 tol=1.65
2024-07-14 00:58:28,534 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.8 pTM=0.495 ipTM=0.2 tol=1.9
2024-07-14 00:58:45,796 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.8 pTM=0.491 ipTM=0.19 tol=1.16
2024-07-14 00:59:03,033 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.7 pTM=0.494 ipTM=0.195 tol=1.8
2024-07-14 00:59:20,291 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.6 pTM=0.491 ipTM=0.188 tol=1.54
2024-07-14 00:59:37,518 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.8 pTM=0.492 ipTM=0.19 tol=3.01
2024-07-14 00:59:54,762 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.5 pTM=0.491 ipTM=0.192 tol=3.89
2024-07-14 01:00:11,975 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.7 pTM=0.492 ipTM=0.192 tol=1.78
2024-07-14 01:00:29,236 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.5 pTM=0.491 ipTM=0.193 tol=1.33
2024-07-14 01:00:46,463 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.6 pTM=0.49 ipTM=0.195 tol=1.91
2024-07-14 01:01:03,701 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.6 pTM=0.49 ipTM=0.191 tol=2.4
2024-07-14 01:01:03,702 alphafold2_multimer_v3_model_3_seed_000 took 534.4s (30 recycles)
2024-07-14 01:01:23,136 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.1 pTM=0.483 ipTM=0.196
2024-07-14 01:01:40,286 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.7 pTM=0.481 ipTM=0.194 tol=9.89
2024-07-14 01:01:57,459 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.7 pTM=0.48 ipTM=0.18 tol=5.72
2024-07-14 01:02:14,633 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.5 pTM=0.485 ipTM=0.178 tol=7.39
2024-07-14 01:02:31,823 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.3 pTM=0.488 ipTM=0.177 tol=10.7
2024-07-14 01:02:49,020 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.7 pTM=0.492 ipTM=0.189 tol=4.75
2024-07-14 01:03:06,253 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60 pTM=0.494 ipTM=0.192 tol=3.1
2024-07-14 01:03:23,465 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.1 pTM=0.491 ipTM=0.196 tol=3.55
2024-07-14 01:03:40,688 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.9 pTM=0.495 ipTM=0.195 tol=3.25
2024-07-14 01:03:57,911 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.9 pTM=0.497 ipTM=0.199 tol=2.84
2024-07-14 01:04:15,139 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.8 pTM=0.497 ipTM=0.198 tol=3.59
2024-07-14 01:04:32,372 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.1 pTM=0.493 ipTM=0.194 tol=3.58
2024-07-14 01:04:49,601 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60 pTM=0.498 ipTM=0.195 tol=3.82
2024-07-14 01:05:06,836 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.6 pTM=0.494 ipTM=0.196 tol=4.11
2024-07-14 01:05:24,059 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.9 pTM=0.497 ipTM=0.195 tol=3.3
2024-07-14 01:05:41,291 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.9 pTM=0.498 ipTM=0.197 tol=4.26
2024-07-14 01:05:58,496 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.6 pTM=0.496 ipTM=0.184 tol=7.59
2024-07-14 01:06:15,687 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.4 pTM=0.492 ipTM=0.196 tol=4.74
2024-07-14 01:06:32,888 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.3 pTM=0.5 ipTM=0.198 tol=2.47
2024-07-14 01:06:50,104 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.2 pTM=0.496 ipTM=0.196 tol=2.93
2024-07-14 01:07:07,331 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.9 pTM=0.495 ipTM=0.194 tol=3.65
2024-07-14 01:07:24,547 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60 pTM=0.497 ipTM=0.199 tol=3.38
2024-07-14 01:07:41,749 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.1 pTM=0.5 ipTM=0.194 tol=3.28
2024-07-14 01:07:58,945 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60 pTM=0.496 ipTM=0.191 tol=1.87
2024-07-14 01:08:16,169 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.8 pTM=0.496 ipTM=0.195 tol=2.25
2024-07-14 01:08:33,384 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60 pTM=0.5 ipTM=0.196 tol=3.36
2024-07-14 01:08:50,586 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.9 pTM=0.497 ipTM=0.19 tol=1.72
2024-07-14 01:09:07,795 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.9 pTM=0.5 ipTM=0.199 tol=3.75
2024-07-14 01:09:25,008 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.7 pTM=0.5 ipTM=0.205 tol=2.86
2024-07-14 01:09:42,250 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.8 pTM=0.497 ipTM=0.2 tol=4.86
2024-07-14 01:09:59,461 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.1 pTM=0.497 ipTM=0.19 tol=4.08
2024-07-14 01:09:59,462 alphafold2_multimer_v3_model_4_seed_000 took 533.4s (30 recycles)
2024-07-14 01:10:17,101 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.2 pTM=0.475 ipTM=0.195
2024-07-14 01:10:34,340 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.7 pTM=0.479 ipTM=0.168 tol=11.6
2024-07-14 01:10:51,585 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.3 pTM=0.486 ipTM=0.185 tol=6.87
2024-07-14 01:11:08,857 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.494 ipTM=0.184 tol=5.43
2024-07-14 01:11:26,117 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.2 pTM=0.495 ipTM=0.19 tol=6.88
2024-07-14 01:11:43,388 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61 pTM=0.494 ipTM=0.19 tol=5.36
2024-07-14 01:12:00,660 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.2 pTM=0.495 ipTM=0.192 tol=2.35
2024-07-14 01:12:17,917 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.2 pTM=0.492 ipTM=0.192 tol=9.36
2024-07-14 01:12:35,172 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.1 pTM=0.493 ipTM=0.195 tol=6.91
2024-07-14 01:12:52,429 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.3 pTM=0.494 ipTM=0.19 tol=4.67
2024-07-14 01:13:09,699 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.492 ipTM=0.186 tol=4.3
2024-07-14 01:13:26,970 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61 pTM=0.494 ipTM=0.195 tol=2.61
2024-07-14 01:13:44,232 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.3 pTM=0.493 ipTM=0.19 tol=6.61
2024-07-14 01:14:01,497 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.4 pTM=0.495 ipTM=0.198 tol=3.85
2024-07-14 01:14:18,777 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.6 pTM=0.493 ipTM=0.197 tol=5.02
2024-07-14 01:14:36,054 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.2 pTM=0.493 ipTM=0.192 tol=2.37
2024-07-14 01:14:53,338 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.5 pTM=0.493 ipTM=0.188 tol=3.53
2024-07-14 01:15:10,593 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.2 pTM=0.494 ipTM=0.196 tol=3.91
2024-07-14 01:15:27,885 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.2 pTM=0.493 ipTM=0.188 tol=4.54
2024-07-14 01:15:45,149 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.3 pTM=0.492 ipTM=0.182 tol=4.55
2024-07-14 01:16:02,445 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.2 pTM=0.491 ipTM=0.184 tol=2.74
2024-07-14 01:16:19,745 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.2 pTM=0.496 ipTM=0.199 tol=1.88
2024-07-14 01:16:37,012 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.2 pTM=0.494 ipTM=0.19 tol=2.57
2024-07-14 01:16:54,296 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.3 pTM=0.496 ipTM=0.197 tol=2.45
2024-07-14 01:17:11,550 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.3 pTM=0.494 ipTM=0.193 tol=6.7
2024-07-14 01:17:28,789 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.1 pTM=0.494 ipTM=0.189 tol=2.4
2024-07-14 01:17:46,072 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.3 pTM=0.493 ipTM=0.194 tol=2.53
2024-07-14 01:18:03,309 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.3 pTM=0.494 ipTM=0.19 tol=2.34
2024-07-14 01:18:20,560 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.3 pTM=0.493 ipTM=0.194 tol=3.31
2024-07-14 01:18:37,782 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.3 pTM=0.491 ipTM=0.189 tol=3.29
2024-07-14 01:18:55,011 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.7 pTM=0.493 ipTM=0.189 tol=3.07
2024-07-14 01:18:55,012 alphafold2_multimer_v3_model_5_seed_000 took 535.1s (30 recycles)
2024-07-14 01:18:55,489 reranking models by 'multimer' metric
2024-07-14 01:18:56,543 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-14 01:20:28,830 Relaxation took 93.3s
2024-07-14 01:20:28,830 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.4 pTM=0.484 ipTM=0.201
2024-07-14 01:21:49,193 Relaxation took 80.4s
2024-07-14 01:21:49,193 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.1 pTM=0.497 ipTM=0.19
2024-07-14 01:22:59,984 Relaxation took 70.8s
2024-07-14 01:22:59,985 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.6 pTM=0.49 ipTM=0.191
2024-07-14 01:24:31,491 Relaxation took 91.5s
2024-07-14 01:24:31,491 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.7 pTM=0.493 ipTM=0.189
2024-07-14 01:25:40,238 Relaxation took 68.7s
2024-07-14 01:25:40,238 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.3 pTM=0.488 ipTM=0.17
2024-07-14 01:25:41,860 Done