2024-07-14 01:49:48,427 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-14 01:49:48,729 Running on GPU 2024-07-14 01:49:57,002 Found 6 citations for tools or databases 2024-07-14 01:49:57,002 Query 1/1: WNT9B_PSD1 (length 1381) 2024-07-14 01:49:57,446 Sleeping for 8s. Reason: PENDING 2024-07-14 01:50:05,874 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:50:15,319 Sleeping for 5s. Reason: RUNNING 2024-07-14 01:50:20,752 Sleeping for 6s. Reason: RUNNING 2024-07-14 01:50:27,174 Sleeping for 5s. Reason: RUNNING 2024-07-14 01:50:32,586 Sleeping for 10s. Reason: RUNNING 2024-07-14 01:50:43,014 Sleeping for 8s. Reason: RUNNING 2024-07-14 01:50:51,435 Sleeping for 10s. Reason: RUNNING 2024-07-14 01:51:01,870 Sleeping for 10s. Reason: RUNNING 2024-07-14 01:51:12,318 Sleeping for 5s. Reason: RUNNING 2024-07-14 01:51:17,750 Sleeping for 6s. Reason: RUNNING 2024-07-14 01:51:24,190 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:51:33,623 Sleeping for 8s. Reason: RUNNING 2024-07-14 01:51:42,049 Sleeping for 10s. Reason: RUNNING 2024-07-14 01:51:52,482 Sleeping for 6s. Reason: RUNNING 2024-07-14 01:51:58,902 Sleeping for 5s. Reason: RUNNING 2024-07-14 01:52:08,945 Sleeping for 6s. Reason: PENDING 2024-07-14 01:52:15,356 Sleeping for 5s. Reason: RUNNING 2024-07-14 01:52:20,769 Sleeping for 7s. Reason: RUNNING 2024-07-14 01:52:28,191 Sleeping for 6s. Reason: RUNNING 2024-07-14 01:52:34,630 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:52:44,059 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:52:53,482 Sleeping for 8s. Reason: RUNNING 2024-07-14 01:53:01,915 Sleeping for 7s. Reason: RUNNING 2024-07-14 01:53:09,326 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:53:18,741 Sleeping for 8s. Reason: RUNNING 2024-07-14 01:53:27,149 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:53:36,591 Sleeping for 8s. Reason: RUNNING 2024-07-14 01:53:45,034 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:53:54,461 Sleeping for 9s. Reason: RUNNING 2024-07-14 01:54:07,644 Setting max_seq=508, max_extra_seq=2048 2024-07-14 01:58:47,333 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.1 pTM=0.342 ipTM=0.294 2024-07-14 01:59:38,775 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.2 pTM=0.393 ipTM=0.327 tol=12.8 2024-07-14 02:00:30,349 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.8 pTM=0.396 ipTM=0.329 tol=6.54 2024-07-14 02:01:21,992 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.9 pTM=0.424 ipTM=0.521 tol=6.12 2024-07-14 02:02:13,641 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.7 pTM=0.408 ipTM=0.435 tol=4.22 2024-07-14 02:03:05,334 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.6 pTM=0.396 ipTM=0.415 tol=3.15 2024-07-14 02:03:57,011 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.1 pTM=0.416 ipTM=0.431 tol=3 2024-07-14 02:04:48,688 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.4 pTM=0.424 ipTM=0.451 tol=3.55 2024-07-14 02:05:40,344 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.8 pTM=0.406 ipTM=0.445 tol=5.04 2024-07-14 02:06:32,017 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52 pTM=0.412 ipTM=0.458 tol=5.16 2024-07-14 02:07:23,692 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.5 pTM=0.431 ipTM=0.441 tol=5.99 2024-07-14 02:08:15,354 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.7 pTM=0.438 ipTM=0.426 tol=2.32 2024-07-14 02:09:07,037 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.5 pTM=0.433 ipTM=0.401 tol=2.22 2024-07-14 02:09:58,655 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.5 pTM=0.43 ipTM=0.406 tol=1.58 2024-07-14 02:10:50,272 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.2 pTM=0.42 ipTM=0.407 tol=2.76 2024-07-14 02:11:41,899 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.4 pTM=0.424 ipTM=0.413 tol=3.13 2024-07-14 02:12:33,528 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.8 pTM=0.435 ipTM=0.42 tol=3.39 2024-07-14 02:13:25,117 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.9 pTM=0.445 ipTM=0.44 tol=5.07 2024-07-14 02:14:16,717 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.6 pTM=0.44 ipTM=0.432 tol=5.4 2024-07-14 02:15:08,342 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.7 pTM=0.438 ipTM=0.424 tol=4.2 2024-07-14 02:15:59,993 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.5 pTM=0.435 ipTM=0.426 tol=4.36 2024-07-14 02:16:51,603 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.7 pTM=0.437 ipTM=0.43 tol=4.36 2024-07-14 02:17:43,260 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.7 pTM=0.446 ipTM=0.472 tol=8.11 2024-07-14 02:18:34,906 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.45 ipTM=0.497 tol=3.71 2024-07-14 02:19:26,533 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.7 pTM=0.443 ipTM=0.485 tol=3.29 2024-07-14 02:20:18,164 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.6 pTM=0.441 ipTM=0.464 tol=4.33 2024-07-14 02:21:09,832 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.4 pTM=0.431 ipTM=0.433 tol=3.45 2024-07-14 02:22:01,455 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.5 pTM=0.432 ipTM=0.438 tol=3.41 2024-07-14 02:22:53,138 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.5 pTM=0.432 ipTM=0.436 tol=3.18 2024-07-14 02:23:44,793 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.6 pTM=0.436 ipTM=0.43 tol=4.91 2024-07-14 02:24:36,488 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.2 pTM=0.419 ipTM=0.394 tol=4.95 2024-07-14 02:24:36,490 alphafold2_multimer_v3_model_1_seed_000 took 1767.9s (30 recycles) 2024-07-14 02:25:29,484 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.3 pTM=0.331 ipTM=0.229 2024-07-14 02:26:21,260 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.8 pTM=0.427 ipTM=0.425 tol=12.1 2024-07-14 02:27:12,978 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.1 pTM=0.455 ipTM=0.462 tol=11.2 2024-07-14 02:28:04,697 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.3 pTM=0.452 ipTM=0.419 tol=6.2 2024-07-14 02:28:56,427 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.4 pTM=0.447 ipTM=0.455 tol=5.79 2024-07-14 02:29:48,144 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.2 pTM=0.442 ipTM=0.481 tol=6.47 2024-07-14 02:30:39,845 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.2 pTM=0.432 ipTM=0.501 tol=2.87 2024-07-14 02:31:31,559 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.2 pTM=0.436 ipTM=0.498 tol=2.5 2024-07-14 02:32:23,310 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.2 pTM=0.435 ipTM=0.5 tol=2.49 2024-07-14 02:33:15,076 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.9 pTM=0.425 ipTM=0.486 tol=1.4 2024-07-14 02:34:06,828 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52 pTM=0.425 ipTM=0.47 tol=2.39 2024-07-14 02:34:58,574 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.3 pTM=0.438 ipTM=0.501 tol=2 2024-07-14 02:35:50,371 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52 pTM=0.423 ipTM=0.478 tol=1.42 2024-07-14 02:36:42,134 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52 pTM=0.423 ipTM=0.505 tol=1.32 2024-07-14 02:37:33,912 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.1 pTM=0.423 ipTM=0.503 tol=1.5 2024-07-14 02:38:25,673 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.9 pTM=0.416 ipTM=0.468 tol=3.81 2024-07-14 02:39:17,470 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52 pTM=0.42 ipTM=0.47 tol=3.8 2024-07-14 02:40:09,240 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.3 pTM=0.433 ipTM=0.487 tol=1.4 2024-07-14 02:41:01,003 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.1 pTM=0.424 ipTM=0.47 tol=1.59 2024-07-14 02:41:52,775 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.1 pTM=0.426 ipTM=0.471 tol=1.23 2024-07-14 02:42:44,519 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.8 pTM=0.423 ipTM=0.49 tol=1.43 2024-07-14 02:43:36,309 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.9 pTM=0.422 ipTM=0.486 tol=1.28 2024-07-14 02:44:28,073 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.9 pTM=0.425 ipTM=0.454 tol=1.65 2024-07-14 02:45:19,881 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.1 pTM=0.436 ipTM=0.47 tol=2.24 2024-07-14 02:46:11,669 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.8 pTM=0.415 ipTM=0.44 tol=2.1 2024-07-14 02:47:03,475 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.9 pTM=0.429 ipTM=0.459 tol=1.33 2024-07-14 02:47:55,249 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.9 pTM=0.427 ipTM=0.454 tol=1.69 2024-07-14 02:48:47,028 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.9 pTM=0.423 ipTM=0.448 tol=1.56 2024-07-14 02:49:38,779 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52 pTM=0.428 ipTM=0.442 tol=3.04 2024-07-14 02:50:30,558 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.1 pTM=0.426 ipTM=0.468 tol=2.81 2024-07-14 02:51:22,323 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.1 pTM=0.426 ipTM=0.469 tol=1.38 2024-07-14 02:51:22,324 alphafold2_multimer_v3_model_2_seed_000 took 1604.7s (30 recycles) 2024-07-14 02:52:15,491 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.3 pTM=0.346 ipTM=0.286 2024-07-14 02:53:07,502 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.8 pTM=0.341 ipTM=0.316 tol=11.2 2024-07-14 02:53:59,516 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.8 pTM=0.336 ipTM=0.22 tol=9.95 2024-07-14 02:54:51,567 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.1 pTM=0.333 ipTM=0.226 tol=4.34 2024-07-14 02:55:43,650 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.7 pTM=0.331 ipTM=0.214 tol=4.68 2024-07-14 02:56:35,760 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.5 pTM=0.328 ipTM=0.223 tol=4.43 2024-07-14 02:57:27,831 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.5 pTM=0.328 ipTM=0.227 tol=5.75 2024-07-14 02:58:19,961 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.5 pTM=0.331 ipTM=0.245 tol=5.74 2024-07-14 02:59:12,093 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.5 pTM=0.33 ipTM=0.224 tol=8.12 2024-07-14 03:00:04,214 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.2 pTM=0.335 ipTM=0.231 tol=4.89 2024-07-14 03:00:56,321 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.3 pTM=0.336 ipTM=0.238 tol=5.16 2024-07-14 03:01:48,425 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.2 pTM=0.335 ipTM=0.239 tol=5.5 2024-07-14 03:02:40,527 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.2 pTM=0.335 ipTM=0.228 tol=4.86 2024-07-14 03:03:32,614 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49 pTM=0.333 ipTM=0.235 tol=3.9 2024-07-14 03:04:24,630 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.1 pTM=0.334 ipTM=0.247 tol=5.32 2024-07-14 03:05:16,670 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.3 pTM=0.335 ipTM=0.248 tol=5.41 2024-07-14 03:06:08,707 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.3 pTM=0.337 ipTM=0.261 tol=4.48 2024-07-14 03:07:00,739 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.4 pTM=0.335 ipTM=0.272 tol=4.04 2024-07-14 03:07:52,815 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.4 pTM=0.335 ipTM=0.266 tol=3.88 2024-07-14 03:08:44,910 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.6 pTM=0.337 ipTM=0.283 tol=4.42 2024-07-14 03:09:36,969 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.2 pTM=0.336 ipTM=0.285 tol=3.88 2024-07-14 03:10:29,054 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.4 pTM=0.335 ipTM=0.277 tol=4.26 2024-07-14 03:11:21,099 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.2 pTM=0.335 ipTM=0.272 tol=3.28 2024-07-14 03:12:13,167 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.2 pTM=0.335 ipTM=0.281 tol=3.86 2024-07-14 03:13:05,223 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.2 pTM=0.336 ipTM=0.271 tol=4.69 2024-07-14 03:13:57,324 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.2 pTM=0.336 ipTM=0.262 tol=4.14 2024-07-14 03:14:49,393 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.3 pTM=0.335 ipTM=0.275 tol=4.73 2024-07-14 03:15:41,525 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.3 pTM=0.334 ipTM=0.264 tol=4.48 2024-07-14 03:16:33,618 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.2 pTM=0.334 ipTM=0.268 tol=3.79 2024-07-14 03:17:25,692 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.2 pTM=0.337 ipTM=0.27 tol=4.12 2024-07-14 03:18:17,785 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.2 pTM=0.335 ipTM=0.271 tol=5.09 2024-07-14 03:18:17,786 alphafold2_multimer_v3_model_3_seed_000 took 1614.3s (30 recycles) 2024-07-14 03:19:10,885 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.3 pTM=0.357 ipTM=0.265 2024-07-14 03:20:02,897 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.4 pTM=0.347 ipTM=0.265 tol=13.3 2024-07-14 03:20:54,902 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.2 pTM=0.385 ipTM=0.496 tol=19.9 2024-07-14 03:21:46,976 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.8 pTM=0.376 ipTM=0.427 tol=15.6 2024-07-14 03:22:39,037 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.2 pTM=0.388 ipTM=0.495 tol=7.74 2024-07-14 03:23:31,051 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.3 pTM=0.402 ipTM=0.493 tol=19.6 2024-07-14 03:24:23,085 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.4 pTM=0.376 ipTM=0.457 tol=9.17 2024-07-14 03:25:15,168 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.9 pTM=0.394 ipTM=0.557 tol=5.14 2024-07-14 03:26:07,192 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.6 pTM=0.392 ipTM=0.538 tol=4.45 2024-07-14 03:26:59,154 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.3 pTM=0.39 ipTM=0.496 tol=3.16 2024-07-14 03:27:51,145 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.8 pTM=0.392 ipTM=0.542 tol=8.09 2024-07-14 03:28:43,124 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.8 pTM=0.396 ipTM=0.565 tol=4.43 2024-07-14 03:29:35,025 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.7 pTM=0.4 ipTM=0.564 tol=5.44 2024-07-14 03:30:26,951 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.8 pTM=0.398 ipTM=0.555 tol=3.83 2024-07-14 03:31:18,859 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.2 pTM=0.406 ipTM=0.595 tol=4.54 2024-07-14 03:32:10,769 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49 pTM=0.405 ipTM=0.575 tol=4.38 2024-07-14 03:33:02,667 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.1 pTM=0.401 ipTM=0.57 tol=2.96 2024-07-14 03:33:54,586 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.4 pTM=0.415 ipTM=0.64 tol=3.12 2024-07-14 03:34:46,474 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.5 pTM=0.413 ipTM=0.633 tol=2.75 2024-07-14 03:35:38,341 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.6 pTM=0.421 ipTM=0.656 tol=2.18 2024-07-14 03:36:30,285 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.6 pTM=0.412 ipTM=0.635 tol=4.27 2024-07-14 03:37:22,167 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.8 pTM=0.425 ipTM=0.656 tol=2.74 2024-07-14 03:38:14,065 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.5 pTM=0.412 ipTM=0.633 tol=4.36 2024-07-14 03:39:05,983 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.3 pTM=0.416 ipTM=0.643 tol=5.71 2024-07-14 03:39:57,938 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.6 pTM=0.411 ipTM=0.643 tol=5.55 2024-07-14 03:40:49,866 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.7 pTM=0.415 ipTM=0.629 tol=7.68 2024-07-14 03:41:41,834 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50 pTM=0.417 ipTM=0.65 tol=4.6 2024-07-14 03:42:33,852 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.7 pTM=0.414 ipTM=0.631 tol=2.87 2024-07-14 03:43:25,795 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50 pTM=0.418 ipTM=0.656 tol=2.5 2024-07-14 03:44:17,679 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.9 pTM=0.421 ipTM=0.645 tol=3.25 2024-07-14 03:45:09,615 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50 pTM=0.414 ipTM=0.638 tol=4.08 2024-07-14 03:45:09,616 alphafold2_multimer_v3_model_4_seed_000 took 1610.7s (30 recycles) 2024-07-14 03:46:02,753 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.7 pTM=0.34 ipTM=0.205 2024-07-14 03:46:54,874 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.7 pTM=0.337 ipTM=0.291 tol=22.2 2024-07-14 03:47:46,866 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.6 pTM=0.335 ipTM=0.229 tol=11.6 2024-07-14 03:48:38,860 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.2 pTM=0.338 ipTM=0.216 tol=9.55 2024-07-14 03:49:30,870 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.6 pTM=0.343 ipTM=0.219 tol=10 2024-07-14 03:50:22,898 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.1 pTM=0.341 ipTM=0.219 tol=7.9 2024-07-14 03:51:14,943 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.9 pTM=0.341 ipTM=0.221 tol=7.23 2024-07-14 03:52:06,997 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.7 pTM=0.337 ipTM=0.223 tol=5.7 2024-07-14 03:52:59,055 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.8 pTM=0.345 ipTM=0.222 tol=6.46 2024-07-14 03:53:51,012 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.8 pTM=0.377 ipTM=0.308 tol=6.22 2024-07-14 03:54:42,950 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.6 pTM=0.402 ipTM=0.427 tol=4.7 2024-07-14 03:55:34,870 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.1 pTM=0.423 ipTM=0.492 tol=10.7 2024-07-14 03:56:26,792 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.9 pTM=0.451 ipTM=0.542 tol=8.31 2024-07-14 03:57:18,644 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.1 pTM=0.46 ipTM=0.525 tol=4.52 2024-07-14 03:58:10,484 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.5 pTM=0.477 ipTM=0.556 tol=4.58 2024-07-14 03:59:02,311 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.8 pTM=0.493 ipTM=0.557 tol=3.89 2024-07-14 03:59:54,159 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.8 pTM=0.503 ipTM=0.576 tol=3.43 2024-07-14 04:00:46,000 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.1 pTM=0.509 ipTM=0.575 tol=2.49 2024-07-14 04:01:37,830 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54 pTM=0.51 ipTM=0.579 tol=2.21 2024-07-14 04:02:29,645 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54 pTM=0.513 ipTM=0.586 tol=1.82 2024-07-14 04:03:21,471 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.2 pTM=0.513 ipTM=0.589 tol=6.03 2024-07-14 04:04:13,270 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54 pTM=0.508 ipTM=0.585 tol=5.15 2024-07-14 04:05:05,076 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.1 pTM=0.512 ipTM=0.582 tol=3.43 2024-07-14 04:05:56,871 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.8 pTM=0.514 ipTM=0.588 tol=2.31 2024-07-14 04:06:48,712 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.8 pTM=0.509 ipTM=0.577 tol=2.12 2024-07-14 04:07:40,533 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.9 pTM=0.513 ipTM=0.587 tol=6.31 2024-07-14 04:08:32,344 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.1 pTM=0.513 ipTM=0.582 tol=3.26 2024-07-14 04:09:24,202 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.1 pTM=0.509 ipTM=0.583 tol=5.97 2024-07-14 04:10:16,031 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54 pTM=0.504 ipTM=0.568 tol=4.46 2024-07-14 04:11:07,871 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.2 pTM=0.51 ipTM=0.58 tol=3.82 2024-07-14 04:11:59,700 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.2 pTM=0.508 ipTM=0.573 tol=2.79 2024-07-14 04:11:59,701 alphafold2_multimer_v3_model_5_seed_000 took 1609.0s (30 recycles) 2024-07-14 04:12:00,835 reranking models by 'multimer' metric 2024-07-14 04:12:21,331 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-14 04:14:48,374 Relaxation took 167.5s 2024-07-14 04:14:48,374 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50 pTM=0.414 ipTM=0.638 2024-07-14 04:17:00,147 Relaxation took 131.8s 2024-07-14 04:17:00,147 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.2 pTM=0.508 ipTM=0.573 2024-07-14 04:19:31,808 Relaxation took 151.7s 2024-07-14 04:19:31,809 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.1 pTM=0.426 ipTM=0.469 2024-07-14 04:38:49,782 Relaxation took 1158.0s 2024-07-14 04:38:49,782 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.2 pTM=0.419 ipTM=0.394 2024-07-14 04:41:28,289 Relaxation took 158.5s 2024-07-14 04:41:28,289 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.2 pTM=0.335 ipTM=0.271 2024-07-14 04:41:37,111 Done