2024-07-14 04:42:55,342 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-14 04:42:55,673 Running on GPU
2024-07-14 04:43:05,475 Found 6 citations for tools or databases
2024-07-14 04:43:05,476 Query 1/1: ZMYM3_RL30 (length 1485)
2024-07-14 04:43:05,911 Sleeping for 6s. Reason: PENDING
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2024-07-14 04:44:03,260 Sleeping for 9s. Reason: RUNNING
2024-07-14 04:44:12,698 Sleeping for 9s. Reason: RUNNING
2024-07-14 04:44:22,115 Sleeping for 10s. Reason: RUNNING
2024-07-14 04:44:32,550 Sleeping for 6s. Reason: RUNNING
2024-07-14 04:44:38,974 Sleeping for 6s. Reason: RUNNING
2024-07-14 04:44:45,397 Sleeping for 8s. Reason: RUNNING
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2024-07-14 04:45:01,272 Sleeping for 9s. Reason: RUNNING
2024-07-14 04:45:10,700 Sleeping for 7s. Reason: RUNNING
2024-07-14 04:45:18,106 Sleeping for 10s. Reason: RUNNING
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2024-07-14 04:45:35,939 Sleeping for 9s. Reason: RUNNING
2024-07-14 04:45:45,354 Sleeping for 9s. Reason: RUNNING
2024-07-14 04:45:54,777 Sleeping for 8s. Reason: RUNNING
2024-07-14 04:46:03,194 Sleeping for 5s. Reason: RUNNING
2024-07-14 04:46:10,251 Sleeping for 10s. Reason: PENDING
2024-07-14 04:46:20,697 Sleeping for 8s. Reason: RUNNING
2024-07-14 04:46:29,111 Sleeping for 5s. Reason: RUNNING
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2024-07-14 04:46:41,979 Sleeping for 9s. Reason: RUNNING
2024-07-14 04:46:51,414 Sleeping for 5s. Reason: RUNNING
2024-07-14 04:46:56,850 Sleeping for 5s. Reason: RUNNING
2024-07-14 04:47:02,273 Sleeping for 6s. Reason: RUNNING
2024-07-14 04:47:08,690 Sleeping for 7s. Reason: RUNNING
2024-07-14 04:47:16,117 Sleeping for 6s. Reason: RUNNING
2024-07-14 04:47:22,532 Sleeping for 8s. Reason: RUNNING
2024-07-14 04:47:30,951 Sleeping for 5s. Reason: RUNNING
2024-07-14 04:47:36,367 Sleeping for 5s. Reason: RUNNING
2024-07-14 04:47:41,788 Sleeping for 6s. Reason: RUNNING
2024-07-14 04:47:48,200 Sleeping for 7s. Reason: RUNNING
2024-07-14 04:47:55,844 Sleeping for 6s. Reason: RUNNING
2024-07-14 04:48:02,271 Sleeping for 8s. Reason: RUNNING
2024-07-14 04:48:13,128 Setting max_seq=508, max_extra_seq=2048
2024-07-14 04:52:57,948 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51 pTM=0.331 ipTM=0.226
2024-07-14 04:54:01,908 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.2 pTM=0.339 ipTM=0.321 tol=14.2
2024-07-14 04:55:05,933 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.1 pTM=0.345 ipTM=0.412 tol=11.8
2024-07-14 04:56:10,024 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.9 pTM=0.34 ipTM=0.349 tol=7.12
2024-07-14 04:57:14,161 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.4 pTM=0.34 ipTM=0.344 tol=6.38
2024-07-14 04:58:18,305 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.7 pTM=0.34 ipTM=0.356 tol=6.15
2024-07-14 04:59:22,471 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.5 pTM=0.339 ipTM=0.348 tol=2.99
2024-07-14 05:00:26,623 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51 pTM=0.347 ipTM=0.434 tol=3.98
2024-07-14 05:01:30,744 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.7 pTM=0.357 ipTM=0.574 tol=3.99
2024-07-14 05:02:34,885 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.8 pTM=0.358 ipTM=0.585 tol=5.04
2024-07-14 05:03:39,130 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.8 pTM=0.356 ipTM=0.577 tol=4.21
2024-07-14 05:04:43,406 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.7 pTM=0.358 ipTM=0.601 tol=5.19
2024-07-14 05:05:47,662 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.9 pTM=0.358 ipTM=0.601 tol=5.08
2024-07-14 05:06:51,833 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.9 pTM=0.359 ipTM=0.601 tol=4.16
2024-07-14 05:07:56,024 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.9 pTM=0.358 ipTM=0.595 tol=3.99
2024-07-14 05:09:00,186 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.9 pTM=0.36 ipTM=0.623 tol=4.54
2024-07-14 05:10:04,327 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.9 pTM=0.361 ipTM=0.631 tol=4.69
2024-07-14 05:11:08,546 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.2 pTM=0.364 ipTM=0.675 tol=4.24
2024-07-14 05:12:12,670 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.2 pTM=0.365 ipTM=0.686 tol=2.69
2024-07-14 05:13:16,891 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.3 pTM=0.365 ipTM=0.701 tol=2.44
2024-07-14 05:14:21,062 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.2 pTM=0.365 ipTM=0.691 tol=2.47
2024-07-14 05:15:25,281 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.4 pTM=0.367 ipTM=0.701 tol=1.83
2024-07-14 05:16:29,421 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.5 pTM=0.367 ipTM=0.716 tol=2.58
2024-07-14 05:17:33,644 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.4 pTM=0.367 ipTM=0.71 tol=2.99
2024-07-14 05:18:37,796 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.5 pTM=0.365 ipTM=0.695 tol=2.97
2024-07-14 05:19:41,946 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.3 pTM=0.367 ipTM=0.712 tol=2
2024-07-14 05:20:46,182 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.5 pTM=0.367 ipTM=0.716 tol=1.94
2024-07-14 05:21:50,540 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.5 pTM=0.368 ipTM=0.728 tol=1.93
2024-07-14 05:22:54,661 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.5 pTM=0.367 ipTM=0.705 tol=1.79
2024-07-14 05:23:58,785 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.4 pTM=0.367 ipTM=0.721 tol=2.08
2024-07-14 05:25:02,917 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.3 pTM=0.367 ipTM=0.71 tol=2.07
2024-07-14 05:25:02,918 alphafold2_multimer_v3_model_1_seed_000 took 2161.4s (30 recycles)
2024-07-14 05:26:08,453 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.5 pTM=0.335 ipTM=0.242
2024-07-14 05:27:12,634 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.8 pTM=0.333 ipTM=0.218 tol=14
2024-07-14 05:28:16,853 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.4 pTM=0.339 ipTM=0.291 tol=13.2
2024-07-14 05:29:21,154 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52 pTM=0.347 ipTM=0.398 tol=10.1
2024-07-14 05:30:25,457 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.1 pTM=0.347 ipTM=0.381 tol=6.85
2024-07-14 05:31:29,626 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.8 pTM=0.344 ipTM=0.342 tol=4.55
2024-07-14 05:32:33,882 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.8 pTM=0.342 ipTM=0.321 tol=4.13
2024-07-14 05:33:38,048 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.9 pTM=0.342 ipTM=0.314 tol=3.76
2024-07-14 05:34:42,231 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.9 pTM=0.341 ipTM=0.304 tol=3.19
2024-07-14 05:35:46,431 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.9 pTM=0.342 ipTM=0.305 tol=6.23
2024-07-14 05:36:50,691 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.9 pTM=0.337 ipTM=0.256 tol=3.19
2024-07-14 05:37:54,959 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.8 pTM=0.336 ipTM=0.242 tol=6.56
2024-07-14 05:38:59,202 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.9 pTM=0.338 ipTM=0.26 tol=4.7
2024-07-14 05:40:03,505 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.1 pTM=0.34 ipTM=0.293 tol=6.44
2024-07-14 05:41:07,709 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.2 pTM=0.339 ipTM=0.28 tol=3.11
2024-07-14 05:42:11,926 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.9 pTM=0.337 ipTM=0.253 tol=6.12
2024-07-14 05:43:16,252 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.1 pTM=0.336 ipTM=0.246 tol=4.06
2024-07-14 05:44:20,516 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.1 pTM=0.339 ipTM=0.276 tol=5.64
2024-07-14 05:45:24,783 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52 pTM=0.341 ipTM=0.308 tol=2.93
2024-07-14 05:46:29,012 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52 pTM=0.34 ipTM=0.297 tol=5.2
2024-07-14 05:47:33,327 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.9 pTM=0.338 ipTM=0.27 tol=5.15
2024-07-14 05:48:37,641 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.2 pTM=0.34 ipTM=0.294 tol=5.74
2024-07-14 05:49:41,904 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.2 pTM=0.34 ipTM=0.294 tol=2.61
2024-07-14 05:50:46,275 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.1 pTM=0.336 ipTM=0.246 tol=2.93
2024-07-14 05:51:50,772 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52 pTM=0.334 ipTM=0.231 tol=7.42
2024-07-14 05:52:54,995 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.2 pTM=0.335 ipTM=0.228 tol=6.82
2024-07-14 05:53:59,312 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.3 pTM=0.338 ipTM=0.259 tol=2.42
2024-07-14 05:55:03,648 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.2 pTM=0.339 ipTM=0.282 tol=2.86
2024-07-14 05:56:07,906 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.1 pTM=0.336 ipTM=0.244 tol=2.7
2024-07-14 05:57:12,169 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.1 pTM=0.337 ipTM=0.255 tol=1.51
2024-07-14 05:58:16,434 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.2 pTM=0.339 ipTM=0.282 tol=2.07
2024-07-14 05:58:16,435 alphafold2_multimer_v3_model_2_seed_000 took 1992.2s (30 recycles)
2024-07-14 05:59:22,253 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.2 pTM=0.331 ipTM=0.286
2024-07-14 06:00:26,610 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.3 pTM=0.364 ipTM=0.648 tol=22.4
2024-07-14 06:01:30,948 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.2 pTM=0.372 ipTM=0.743 tol=9.97
2024-07-14 06:02:35,357 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.1 pTM=0.369 ipTM=0.704 tol=7.68
2024-07-14 06:03:39,761 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.4 pTM=0.372 ipTM=0.735 tol=8.79
2024-07-14 06:04:44,300 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.6 pTM=0.373 ipTM=0.747 tol=6.42
2024-07-14 06:05:48,597 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.5 pTM=0.374 ipTM=0.74 tol=8.79
2024-07-14 06:06:52,920 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.5 pTM=0.374 ipTM=0.739 tol=4.43
2024-07-14 06:07:57,274 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.7 pTM=0.375 ipTM=0.741 tol=4.77
2024-07-14 06:09:01,617 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.6 pTM=0.375 ipTM=0.75 tol=5.03
2024-07-14 06:10:05,898 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.6 pTM=0.375 ipTM=0.746 tol=8.55
2024-07-14 06:11:10,241 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.5 pTM=0.378 ipTM=0.766 tol=3.19
2024-07-14 06:12:14,488 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.7 pTM=0.38 ipTM=0.786 tol=2.68
2024-07-14 06:13:18,731 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53 pTM=0.383 ipTM=0.805 tol=2.98
2024-07-14 06:14:23,080 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.9 pTM=0.382 ipTM=0.799 tol=5.31
2024-07-14 06:15:27,353 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53 pTM=0.383 ipTM=0.819 tol=4.16
2024-07-14 06:16:31,645 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.9 pTM=0.383 ipTM=0.812 tol=2.01
2024-07-14 06:17:35,930 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53 pTM=0.383 ipTM=0.813 tol=1.72
2024-07-14 06:18:40,128 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.9 pTM=0.384 ipTM=0.817 tol=1.68
2024-07-14 06:19:44,323 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.9 pTM=0.383 ipTM=0.811 tol=1.18
2024-07-14 06:20:48,530 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.8 pTM=0.384 ipTM=0.814 tol=1.36
2024-07-14 06:21:52,759 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53 pTM=0.384 ipTM=0.811 tol=1.28
2024-07-14 06:22:57,043 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53 pTM=0.384 ipTM=0.815 tol=1.42
2024-07-14 06:24:01,292 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.9 pTM=0.384 ipTM=0.816 tol=1.37
2024-07-14 06:25:05,562 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.9 pTM=0.383 ipTM=0.806 tol=1.15
2024-07-14 06:26:10,081 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.8 pTM=0.384 ipTM=0.821 tol=1.18
2024-07-14 06:27:14,347 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.9 pTM=0.383 ipTM=0.818 tol=1.32
2024-07-14 06:28:18,632 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53 pTM=0.384 ipTM=0.814 tol=1.19
2024-07-14 06:29:22,919 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.9 pTM=0.384 ipTM=0.824 tol=1.73
2024-07-14 06:30:27,223 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53 pTM=0.384 ipTM=0.817 tol=1.54
2024-07-14 06:31:31,523 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.9 pTM=0.384 ipTM=0.821 tol=1.25
2024-07-14 06:31:31,524 alphafold2_multimer_v3_model_3_seed_000 took 1993.8s (30 recycles)
2024-07-14 06:32:37,374 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.8 pTM=0.334 ipTM=0.298
2024-07-14 06:33:41,794 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.8 pTM=0.368 ipTM=0.729 tol=19.2
2024-07-14 06:34:46,129 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.9 pTM=0.369 ipTM=0.763 tol=11.8
2024-07-14 06:35:50,580 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.3 pTM=0.369 ipTM=0.763 tol=8.45
2024-07-14 06:36:54,955 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.5 pTM=0.37 ipTM=0.782 tol=6.91
2024-07-14 06:37:59,334 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.5 pTM=0.372 ipTM=0.785 tol=6.06
2024-07-14 06:39:03,668 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.5 pTM=0.372 ipTM=0.789 tol=9.2
2024-07-14 06:40:07,992 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51.4 pTM=0.373 ipTM=0.789 tol=7.81
2024-07-14 06:41:12,301 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.3 pTM=0.373 ipTM=0.793 tol=5.14
2024-07-14 06:42:20,488 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.4 pTM=0.373 ipTM=0.789 tol=4.44
2024-07-14 06:43:25,021 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.2 pTM=0.372 ipTM=0.782 tol=8.44
2024-07-14 06:44:31,610 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.3 pTM=0.374 ipTM=0.795 tol=7.14
2024-07-14 06:45:29,628 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.3 pTM=0.373 ipTM=0.79 tol=8.88
2024-07-14 06:46:33,886 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.5 pTM=0.374 ipTM=0.798 tol=8.39
2024-07-14 06:47:38,195 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.4 pTM=0.373 ipTM=0.789 tol=3.97
2024-07-14 06:48:42,420 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.5 pTM=0.374 ipTM=0.805 tol=2.98
2024-07-14 06:49:46,655 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.2 pTM=0.373 ipTM=0.79 tol=2.91
2024-07-14 06:50:50,907 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.6 pTM=0.375 ipTM=0.794 tol=8.8
2024-07-14 06:51:55,234 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.2 pTM=0.375 ipTM=0.791 tol=7.63
2024-07-14 06:52:59,512 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.4 pTM=0.374 ipTM=0.787 tol=3.87
2024-07-14 06:54:03,734 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51.1 pTM=0.374 ipTM=0.784 tol=2.52
2024-07-14 06:55:08,059 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.4 pTM=0.375 ipTM=0.793 tol=3.01
2024-07-14 06:56:12,287 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.4 pTM=0.373 ipTM=0.797 tol=2.69
2024-07-14 06:57:16,621 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.6 pTM=0.374 ipTM=0.797 tol=2.66
2024-07-14 06:58:20,872 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.3 pTM=0.373 ipTM=0.785 tol=8.16
2024-07-14 06:59:25,237 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.3 pTM=0.374 ipTM=0.794 tol=3.19
2024-07-14 07:00:29,522 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.3 pTM=0.373 ipTM=0.786 tol=6.98
2024-07-14 07:01:33,795 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.3 pTM=0.375 ipTM=0.8 tol=3.44
2024-07-14 07:02:38,112 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.3 pTM=0.374 ipTM=0.795 tol=3.29
2024-07-14 07:03:42,396 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.3 pTM=0.374 ipTM=0.795 tol=6.13
2024-07-14 07:04:46,718 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.2 pTM=0.374 ipTM=0.789 tol=7.37
2024-07-14 07:04:46,720 alphafold2_multimer_v3_model_4_seed_000 took 1993.9s (30 recycles)
2024-07-14 07:05:52,395 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.3 pTM=0.334 ipTM=0.276
2024-07-14 07:06:56,766 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.1 pTM=0.331 ipTM=0.248 tol=13.1
2024-07-14 07:08:01,147 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.2 pTM=0.339 ipTM=0.337 tol=12.7
2024-07-14 07:09:05,504 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.7 pTM=0.336 ipTM=0.279 tol=9.55
2024-07-14 07:10:09,884 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.1 pTM=0.335 ipTM=0.261 tol=6.91
2024-07-14 07:11:14,244 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.1 pTM=0.343 ipTM=0.364 tol=5.43
2024-07-14 07:12:18,646 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.2 pTM=0.352 ipTM=0.464 tol=6.95
2024-07-14 07:13:22,932 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.1 pTM=0.352 ipTM=0.458 tol=3.12
2024-07-14 07:14:27,216 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.4 pTM=0.355 ipTM=0.502 tol=3.04
2024-07-14 07:15:31,499 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.5 pTM=0.354 ipTM=0.497 tol=5.98
2024-07-14 07:16:35,799 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.4 pTM=0.352 ipTM=0.469 tol=2.55
2024-07-14 07:17:40,174 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.3 pTM=0.355 ipTM=0.508 tol=7.32
2024-07-14 07:18:44,548 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.5 pTM=0.353 ipTM=0.487 tol=15.2
2024-07-14 07:19:48,841 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.4 pTM=0.353 ipTM=0.492 tol=12.5
2024-07-14 07:20:53,206 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.4 pTM=0.349 ipTM=0.44 tol=7.44
2024-07-14 07:21:57,497 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.5 pTM=0.353 ipTM=0.485 tol=6.45
2024-07-14 07:23:01,755 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.4 pTM=0.354 ipTM=0.497 tol=6.95
2024-07-14 07:24:06,051 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.4 pTM=0.355 ipTM=0.507 tol=3.4
2024-07-14 07:25:10,380 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.3 pTM=0.352 ipTM=0.475 tol=2.34
2024-07-14 07:26:14,776 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.4 pTM=0.351 ipTM=0.456 tol=2.3
2024-07-14 07:27:19,171 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.2 pTM=0.35 ipTM=0.446 tol=1.86
2024-07-14 07:28:23,447 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.5 pTM=0.353 ipTM=0.478 tol=6.99
2024-07-14 07:29:27,733 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.6 pTM=0.352 ipTM=0.471 tol=3.8
2024-07-14 07:30:32,028 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.6 pTM=0.353 ipTM=0.484 tol=2.54
2024-07-14 07:31:36,287 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.6 pTM=0.352 ipTM=0.469 tol=3.6
2024-07-14 07:32:40,491 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.4 pTM=0.353 ipTM=0.49 tol=6.94
2024-07-14 07:33:44,740 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.5 pTM=0.354 ipTM=0.497 tol=6.32
2024-07-14 07:34:48,989 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.6 pTM=0.355 ipTM=0.505 tol=6.14
2024-07-14 07:35:53,244 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.3 pTM=0.354 ipTM=0.498 tol=2.88
2024-07-14 07:36:57,528 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.6 pTM=0.356 ipTM=0.527 tol=6.55
2024-07-14 07:38:01,837 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.6 pTM=0.357 ipTM=0.539 tol=5.34
2024-07-14 07:38:01,838 alphafold2_multimer_v3_model_5_seed_000 took 1993.8s (30 recycles)
2024-07-14 07:38:03,154 reranking models by 'multimer' metric
2024-07-14 07:38:07,101 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-14 07:40:48,141 Relaxation took 165.0s
2024-07-14 07:40:48,142 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.9 pTM=0.384 ipTM=0.821
2024-07-14 08:17:33,010 Relaxation took 2204.9s
2024-07-14 08:17:33,011 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.2 pTM=0.374 ipTM=0.789
2024-07-14 08:19:24,007 Relaxation took 111.0s
2024-07-14 08:19:24,008 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.3 pTM=0.367 ipTM=0.71
2024-07-14 08:21:18,631 Relaxation took 114.6s
2024-07-14 08:21:18,631 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.6 pTM=0.357 ipTM=0.539
2024-07-14 08:25:08,459 Relaxation took 229.8s
2024-07-14 08:25:08,459 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.2 pTM=0.339 ipTM=0.282
2024-07-14 08:25:11,625 Done