2024-07-14 05:48:08,209 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-14 05:48:08,541 Running on GPU 2024-07-14 05:48:17,553 Found 6 citations for tools or databases 2024-07-14 05:48:17,554 Query 1/1: ZN347_CNFN (length 951) 2024-07-14 05:48:18,021 Sleeping for 9s. Reason: PENDING 2024-07-14 05:48:27,442 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:48:37,860 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:48:48,282 Sleeping for 5s. Reason: RUNNING 2024-07-14 05:48:53,693 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:49:01,127 Sleeping for 5s. Reason: RUNNING 2024-07-14 05:49:06,544 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:49:13,977 Sleeping for 9s. Reason: RUNNING 2024-07-14 05:49:23,422 Sleeping for 5s. Reason: RUNNING 2024-07-14 05:49:28,829 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:49:39,250 Sleeping for 8s. Reason: RUNNING 2024-07-14 05:49:47,671 Sleeping for 8s. Reason: RUNNING 2024-07-14 05:49:56,102 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:50:03,544 Sleeping for 5s. Reason: RUNNING 2024-07-14 05:50:08,972 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:50:19,396 Sleeping for 6s. Reason: RUNNING 2024-07-14 05:50:25,809 Sleeping for 6s. Reason: RUNNING 2024-07-14 05:50:32,227 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:50:39,660 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:50:48,980 Sleeping for 5s. Reason: PENDING 2024-07-14 05:50:54,618 Sleeping for 8s. Reason: RUNNING 2024-07-14 05:51:03,041 Sleeping for 6s. Reason: RUNNING 2024-07-14 05:51:09,491 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:51:16,919 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:51:24,339 Sleeping for 6s. Reason: RUNNING 2024-07-14 05:51:30,755 Sleeping for 9s. Reason: RUNNING 2024-07-14 05:51:40,179 Sleeping for 8s. Reason: RUNNING 2024-07-14 05:51:48,628 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:51:59,053 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:52:09,472 Sleeping for 9s. Reason: RUNNING 2024-07-14 05:52:19,904 Sleeping for 8s. Reason: RUNNING 2024-07-14 05:52:28,339 Sleeping for 7s. Reason: RUNNING 2024-07-14 05:52:35,756 Sleeping for 10s. Reason: RUNNING 2024-07-14 05:52:49,881 Setting max_seq=508, max_extra_seq=2048 2024-07-14 05:56:05,692 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.2 pTM=0.201 ipTM=0.225 2024-07-14 05:56:26,026 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.3 pTM=0.202 ipTM=0.21 tol=15 2024-07-14 05:56:46,436 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.4 pTM=0.203 ipTM=0.217 tol=9.8 2024-07-14 05:57:06,911 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.9 pTM=0.203 ipTM=0.213 tol=5.62 2024-07-14 05:57:27,422 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.7 pTM=0.204 ipTM=0.207 tol=4.62 2024-07-14 05:57:47,968 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.9 pTM=0.205 ipTM=0.222 tol=4.33 2024-07-14 05:58:08,533 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45.1 pTM=0.204 ipTM=0.216 tol=4.39 2024-07-14 05:58:29,117 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.2 pTM=0.202 ipTM=0.204 tol=2.4 2024-07-14 05:58:49,697 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.9 pTM=0.204 ipTM=0.214 tol=4.66 2024-07-14 05:59:10,295 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.3 pTM=0.203 ipTM=0.217 tol=4.54 2024-07-14 05:59:30,901 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.1 pTM=0.204 ipTM=0.211 tol=4.1 2024-07-14 05:59:51,509 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.2 pTM=0.203 ipTM=0.206 tol=5.12 2024-07-14 06:00:12,126 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.8 pTM=0.204 ipTM=0.208 tol=3.13 2024-07-14 06:00:32,729 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.5 pTM=0.204 ipTM=0.213 tol=2.17 2024-07-14 06:00:53,332 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.2 pTM=0.204 ipTM=0.217 tol=2.4 2024-07-14 06:01:13,954 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.5 pTM=0.203 ipTM=0.208 tol=5.72 2024-07-14 06:01:34,573 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.2 pTM=0.205 ipTM=0.204 tol=5.28 2024-07-14 06:01:55,205 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.2 pTM=0.204 ipTM=0.208 tol=5.07 2024-07-14 06:02:15,829 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.5 pTM=0.206 ipTM=0.205 tol=6.52 2024-07-14 06:02:36,457 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.3 pTM=0.204 ipTM=0.195 tol=3.99 2024-07-14 06:02:57,069 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.3 pTM=0.205 ipTM=0.199 tol=5.68 2024-07-14 06:03:17,693 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.3 pTM=0.205 ipTM=0.208 tol=5.28 2024-07-14 06:03:38,291 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.9 pTM=0.207 ipTM=0.206 tol=3.11 2024-07-14 06:03:58,908 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.3 pTM=0.205 ipTM=0.209 tol=3.73 2024-07-14 06:04:19,528 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.8 pTM=0.205 ipTM=0.202 tol=4.07 2024-07-14 06:04:40,147 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.9 pTM=0.204 ipTM=0.21 tol=1.8 2024-07-14 06:05:00,753 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.9 pTM=0.204 ipTM=0.21 tol=2.39 2024-07-14 06:05:21,365 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.4 pTM=0.203 ipTM=0.197 tol=3.73 2024-07-14 06:05:41,974 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.5 pTM=0.205 ipTM=0.207 tol=3.48 2024-07-14 06:06:02,594 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.7 pTM=0.203 ipTM=0.22 tol=3.11 2024-07-14 06:06:23,186 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.2 pTM=0.205 ipTM=0.219 tol=4.88 2024-07-14 06:06:23,187 alphafold2_multimer_v3_model_1_seed_000 took 788.4s (30 recycles) 2024-07-14 06:06:44,284 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.6 pTM=0.214 ipTM=0.192 2024-07-14 06:07:04,819 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=42 pTM=0.214 ipTM=0.194 tol=8.5 2024-07-14 06:07:25,366 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=42 pTM=0.214 ipTM=0.249 tol=5.68 2024-07-14 06:07:45,949 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.4 pTM=0.213 ipTM=0.244 tol=4.7 2024-07-14 06:08:06,543 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.6 pTM=0.211 ipTM=0.22 tol=4.61 2024-07-14 06:08:27,129 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=42.1 pTM=0.212 ipTM=0.239 tol=3.96 2024-07-14 06:08:47,726 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=42.5 pTM=0.21 ipTM=0.231 tol=3.13 2024-07-14 06:09:08,313 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.6 pTM=0.209 ipTM=0.212 tol=4.11 2024-07-14 06:09:28,910 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.7 pTM=0.211 ipTM=0.233 tol=2.86 2024-07-14 06:09:49,505 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.3 pTM=0.208 ipTM=0.239 tol=2.88 2024-07-14 06:10:10,102 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.6 pTM=0.209 ipTM=0.236 tol=2.31 2024-07-14 06:10:30,706 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.7 pTM=0.209 ipTM=0.228 tol=2.7 2024-07-14 06:10:51,318 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.9 pTM=0.21 ipTM=0.227 tol=2.33 2024-07-14 06:11:11,929 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.8 pTM=0.209 ipTM=0.229 tol=1.97 2024-07-14 06:11:32,544 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42.7 pTM=0.209 ipTM=0.241 tol=1.52 2024-07-14 06:11:53,163 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.2 pTM=0.209 ipTM=0.236 tol=1.63 2024-07-14 06:12:13,772 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.5 pTM=0.208 ipTM=0.234 tol=1.67 2024-07-14 06:12:34,387 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.1 pTM=0.208 ipTM=0.241 tol=2.23 2024-07-14 06:12:55,001 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.7 pTM=0.209 ipTM=0.227 tol=3.27 2024-07-14 06:13:15,600 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.2 pTM=0.208 ipTM=0.227 tol=3.72 2024-07-14 06:13:36,206 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=42 pTM=0.21 ipTM=0.231 tol=4.94 2024-07-14 06:13:56,812 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.7 pTM=0.209 ipTM=0.234 tol=3.31 2024-07-14 06:14:17,417 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.2 pTM=0.21 ipTM=0.235 tol=7.5 2024-07-14 06:14:38,020 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.8 pTM=0.211 ipTM=0.232 tol=7.31 2024-07-14 06:14:58,629 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.7 pTM=0.208 ipTM=0.206 tol=4.93 2024-07-14 06:15:19,232 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=42.2 pTM=0.211 ipTM=0.224 tol=4.49 2024-07-14 06:15:39,848 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42.5 pTM=0.209 ipTM=0.226 tol=3.46 2024-07-14 06:16:00,457 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.1 pTM=0.21 ipTM=0.217 tol=4.04 2024-07-14 06:16:21,066 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.2 pTM=0.209 ipTM=0.234 tol=3.97 2024-07-14 06:16:41,655 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42.1 pTM=0.209 ipTM=0.238 tol=3.51 2024-07-14 06:17:02,247 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.8 pTM=0.211 ipTM=0.221 tol=7.96 2024-07-14 06:17:02,248 alphafold2_multimer_v3_model_2_seed_000 took 638.5s (30 recycles) 2024-07-14 06:17:23,422 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.4 pTM=0.211 ipTM=0.247 2024-07-14 06:17:44,003 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=39.3 pTM=0.213 ipTM=0.252 tol=7.66 2024-07-14 06:18:04,590 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=39.3 pTM=0.213 ipTM=0.234 tol=5.88 2024-07-14 06:18:25,177 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=39.5 pTM=0.212 ipTM=0.228 tol=4.04 2024-07-14 06:18:45,784 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.1 pTM=0.211 ipTM=0.226 tol=3.15 2024-07-14 06:19:06,380 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.6 pTM=0.214 ipTM=0.222 tol=1.57 2024-07-14 06:19:26,978 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.1 pTM=0.214 ipTM=0.226 tol=1.32 2024-07-14 06:19:47,583 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.4 pTM=0.214 ipTM=0.213 tol=1.44 2024-07-14 06:20:08,186 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.8 pTM=0.214 ipTM=0.222 tol=1.62 2024-07-14 06:20:28,795 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.1 pTM=0.21 ipTM=0.209 tol=2.38 2024-07-14 06:20:49,399 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.4 pTM=0.21 ipTM=0.224 tol=2.1 2024-07-14 06:21:10,001 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42 pTM=0.212 ipTM=0.214 tol=2.05 2024-07-14 06:21:30,612 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.6 pTM=0.211 ipTM=0.202 tol=1.1 2024-07-14 06:21:51,219 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42 pTM=0.211 ipTM=0.222 tol=1.36 2024-07-14 06:22:11,835 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.2 pTM=0.21 ipTM=0.215 tol=1.86 2024-07-14 06:22:32,455 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.5 pTM=0.21 ipTM=0.206 tol=1.1 2024-07-14 06:22:53,066 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44 pTM=0.21 ipTM=0.213 tol=1.15 2024-07-14 06:23:13,681 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.4 pTM=0.209 ipTM=0.2 tol=1.52 2024-07-14 06:23:34,285 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.6 pTM=0.212 ipTM=0.213 tol=2.3 2024-07-14 06:23:54,892 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.6 pTM=0.21 ipTM=0.199 tol=1.03 2024-07-14 06:24:15,505 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.2 pTM=0.211 ipTM=0.198 tol=2.21 2024-07-14 06:24:36,108 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42 pTM=0.211 ipTM=0.203 tol=0.813 2024-07-14 06:24:56,704 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.9 pTM=0.212 ipTM=0.211 tol=1.25 2024-07-14 06:25:17,295 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.4 pTM=0.214 ipTM=0.23 tol=1.42 2024-07-14 06:25:37,886 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.2 pTM=0.211 ipTM=0.207 tol=2.16 2024-07-14 06:25:58,486 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.8 pTM=0.212 ipTM=0.226 tol=2.12 2024-07-14 06:26:19,090 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.8 pTM=0.21 ipTM=0.216 tol=1.3 2024-07-14 06:26:39,702 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.5 pTM=0.212 ipTM=0.219 tol=0.939 2024-07-14 06:27:00,315 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.8 pTM=0.211 ipTM=0.214 tol=1.45 2024-07-14 06:27:20,924 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.8 pTM=0.213 ipTM=0.228 tol=1.27 2024-07-14 06:27:41,521 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.8 pTM=0.214 ipTM=0.22 tol=1.04 2024-07-14 06:27:41,522 alphafold2_multimer_v3_model_3_seed_000 took 638.7s (30 recycles) 2024-07-14 06:28:02,828 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.9 pTM=0.189 ipTM=0.202 2024-07-14 06:28:23,509 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.3 pTM=0.236 ipTM=0.291 tol=8.6 2024-07-14 06:28:44,176 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.5 pTM=0.274 ipTM=0.301 tol=6.37 2024-07-14 06:29:04,828 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.3 pTM=0.283 ipTM=0.303 tol=7.14 2024-07-14 06:29:25,479 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.8 pTM=0.286 ipTM=0.32 tol=5.07 2024-07-14 06:29:46,137 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.1 pTM=0.283 ipTM=0.289 tol=4.59 2024-07-14 06:30:06,791 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.9 pTM=0.285 ipTM=0.291 tol=3.02 2024-07-14 06:30:27,437 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.2 pTM=0.28 ipTM=0.294 tol=5.2 2024-07-14 06:30:48,094 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.5 pTM=0.291 ipTM=0.315 tol=4.59 2024-07-14 06:31:08,745 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.8 pTM=0.292 ipTM=0.3 tol=3.31 2024-07-14 06:31:29,402 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.8 pTM=0.292 ipTM=0.31 tol=1.67 2024-07-14 06:31:50,050 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.3 pTM=0.29 ipTM=0.305 tol=1.11 2024-07-14 06:32:10,704 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53 pTM=0.284 ipTM=0.303 tol=0.96 2024-07-14 06:32:31,354 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.1 pTM=0.287 ipTM=0.295 tol=3.52 2024-07-14 06:32:52,008 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53 pTM=0.285 ipTM=0.292 tol=3.56 2024-07-14 06:33:12,658 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.2 pTM=0.291 ipTM=0.291 tol=1.49 2024-07-14 06:33:33,315 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.3 pTM=0.286 ipTM=0.299 tol=3.34 2024-07-14 06:33:53,975 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53 pTM=0.283 ipTM=0.304 tol=3.25 2024-07-14 06:34:14,628 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.7 pTM=0.293 ipTM=0.299 tol=4.39 2024-07-14 06:34:35,273 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.2 pTM=0.305 ipTM=0.291 tol=3.38 2024-07-14 06:34:55,936 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.1 pTM=0.292 ipTM=0.288 tol=4.76 2024-07-14 06:35:16,585 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.9 pTM=0.289 ipTM=0.294 tol=6.36 2024-07-14 06:35:37,231 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.1 pTM=0.291 ipTM=0.284 tol=4.55 2024-07-14 06:35:57,879 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.9 pTM=0.3 ipTM=0.28 tol=1.92 2024-07-14 06:36:18,537 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.8 pTM=0.283 ipTM=0.271 tol=2.57 2024-07-14 06:36:39,190 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.1 pTM=0.289 ipTM=0.318 tol=3.64 2024-07-14 06:36:59,860 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.9 pTM=0.283 ipTM=0.303 tol=2.93 2024-07-14 06:37:20,520 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.1 pTM=0.284 ipTM=0.297 tol=1.77 2024-07-14 06:37:41,184 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.6 pTM=0.289 ipTM=0.302 tol=3.91 2024-07-14 06:38:01,849 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.1 pTM=0.286 ipTM=0.304 tol=3.95 2024-07-14 06:38:22,515 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.2 pTM=0.285 ipTM=0.3 tol=2.23 2024-07-14 06:38:22,516 alphafold2_multimer_v3_model_4_seed_000 took 640.4s (30 recycles) 2024-07-14 06:38:43,731 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.6 pTM=0.207 ipTM=0.175 2024-07-14 06:39:04,409 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=42.7 pTM=0.206 ipTM=0.185 tol=13.5 2024-07-14 06:39:25,075 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=42.1 pTM=0.203 ipTM=0.223 tol=6.54 2024-07-14 06:39:45,734 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.1 pTM=0.203 ipTM=0.203 tol=3.94 2024-07-14 06:40:06,414 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.6 pTM=0.201 ipTM=0.2 tol=3.12 2024-07-14 06:40:27,090 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43 pTM=0.201 ipTM=0.204 tol=3.14 2024-07-14 06:40:47,762 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43 pTM=0.201 ipTM=0.203 tol=3.24 2024-07-14 06:41:08,433 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43.6 pTM=0.204 ipTM=0.203 tol=1.62 2024-07-14 06:41:29,094 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43.1 pTM=0.203 ipTM=0.199 tol=2.24 2024-07-14 06:41:49,750 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.4 pTM=0.203 ipTM=0.211 tol=1.45 2024-07-14 06:42:14,236 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44 pTM=0.203 ipTM=0.198 tol=2.66 2024-07-14 06:42:34,938 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43 pTM=0.203 ipTM=0.199 tol=3.23 2024-07-14 06:42:55,675 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.4 pTM=0.201 ipTM=0.2 tol=1.34 2024-07-14 06:43:16,438 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.2 pTM=0.202 ipTM=0.204 tol=1.22 2024-07-14 06:43:37,674 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.9 pTM=0.202 ipTM=0.202 tol=3.27 2024-07-14 06:43:58,360 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43.3 pTM=0.202 ipTM=0.208 tol=2.99 2024-07-14 06:44:20,278 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.4 pTM=0.203 ipTM=0.203 tol=1.28 2024-07-14 06:44:40,967 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.3 pTM=0.202 ipTM=0.201 tol=1.52 2024-07-14 06:44:55,823 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.4 pTM=0.204 ipTM=0.202 tol=1.4 2024-07-14 06:45:16,503 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.9 pTM=0.201 ipTM=0.207 tol=1.86 2024-07-14 06:45:37,193 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.6 pTM=0.203 ipTM=0.205 tol=1.59 2024-07-14 06:45:57,879 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.5 pTM=0.201 ipTM=0.203 tol=3.2 2024-07-14 06:46:18,580 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.2 pTM=0.201 ipTM=0.206 tol=1.26 2024-07-14 06:46:39,264 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.7 pTM=0.202 ipTM=0.203 tol=2.77 2024-07-14 06:46:59,954 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.4 pTM=0.2 ipTM=0.199 tol=1.35 2024-07-14 06:47:20,643 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.3 pTM=0.201 ipTM=0.207 tol=1.29 2024-07-14 06:47:41,342 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.1 pTM=0.201 ipTM=0.205 tol=1.54 2024-07-14 06:48:02,044 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.5 pTM=0.202 ipTM=0.2 tol=1.38 2024-07-14 06:48:22,748 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.9 pTM=0.201 ipTM=0.204 tol=2.23 2024-07-14 06:48:43,416 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.5 pTM=0.201 ipTM=0.198 tol=1.21 2024-07-14 06:49:04,101 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.2 pTM=0.201 ipTM=0.203 tol=1.45 2024-07-14 06:49:04,102 alphafold2_multimer_v3_model_5_seed_000 took 641.0s (30 recycles) 2024-07-14 06:49:04,667 reranking models by 'multimer' metric 2024-07-14 06:49:08,369 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-14 06:51:19,041 Relaxation took 134.4s 2024-07-14 06:51:19,041 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.2 pTM=0.285 ipTM=0.3 2024-07-14 06:53:42,845 Relaxation took 143.8s 2024-07-14 06:53:42,845 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.8 pTM=0.211 ipTM=0.221 2024-07-14 06:55:32,135 Relaxation took 109.3s 2024-07-14 06:55:32,135 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.8 pTM=0.214 ipTM=0.22 2024-07-14 06:57:21,385 Relaxation took 109.2s 2024-07-14 06:57:21,385 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.2 pTM=0.205 ipTM=0.219 2024-07-14 06:59:57,803 Relaxation took 156.4s 2024-07-14 06:59:57,803 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.2 pTM=0.201 ipTM=0.203 2024-07-14 06:59:59,630 Done