2024-07-14 06:34:53,210 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-14 06:34:53,521 Running on GPU 2024-07-14 06:34:59,682 Found 6 citations for tools or databases 2024-07-14 06:34:59,683 Query 1/1: ZN462_OR9G1 (length 2811) 2024-07-14 06:35:00,163 Sleeping for 7s. Reason: PENDING 2024-07-14 06:35:07,590 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:35:15,018 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:35:25,470 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:35:33,883 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:35:42,337 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:35:51,768 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:35:59,205 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:36:08,623 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:36:16,027 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:36:23,447 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:36:33,870 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:36:42,299 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:36:51,719 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:36:59,139 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:37:04,552 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:37:13,996 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:37:20,420 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:37:27,869 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:37:37,290 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:37:47,700 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:37:56,110 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:38:03,523 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:38:10,956 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:38:20,384 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:38:26,807 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:38:33,212 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:38:41,634 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:38:47,061 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:38:53,480 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:39:02,895 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:39:08,309 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:39:18,718 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:39:27,148 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:39:36,572 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:39:44,001 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:39:53,493 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:40:01,908 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:40:13,520 Sleeping for 7s. Reason: PENDING 2024-07-14 06:40:20,934 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:40:29,352 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:40:38,771 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:40:49,199 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:40:56,624 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:41:07,043 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:41:13,484 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:41:23,915 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:41:33,343 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:41:38,765 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:41:51,975 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:41:58,403 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:42:03,825 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:42:14,238 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:42:21,656 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:42:29,086 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:42:37,498 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:42:43,939 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:42:54,371 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:43:02,779 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:43:08,204 Sleeping for 8s. Reason: RUNNING 2024-07-14 06:43:16,632 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:43:26,052 Sleeping for 5s. Reason: RUNNING 2024-07-14 06:43:31,515 Sleeping for 10s. Reason: RUNNING 2024-07-14 06:43:41,944 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:43:49,375 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:43:55,836 Sleeping for 7s. Reason: RUNNING 2024-07-14 06:44:04,588 Sleeping for 6s. Reason: RUNNING 2024-07-14 06:44:11,021 Sleeping for 9s. Reason: RUNNING 2024-07-14 06:44:25,549 Setting max_seq=508, max_extra_seq=2048 2024-07-14 06:54:51,182 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=35.6 pTM=0.308 ipTM=0.273 2024-07-14 07:02:06,607 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=38.4 pTM=0.309 ipTM=0.285 tol=17.1 2024-07-14 07:09:22,285 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.1 pTM=0.309 ipTM=0.28 tol=12.8 2024-07-14 07:16:38,029 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=39.3 pTM=0.307 ipTM=0.285 tol=7.09 2024-07-14 07:23:53,510 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.2 pTM=0.309 ipTM=0.324 tol=7.04 2024-07-14 07:31:09,120 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=39.2 pTM=0.309 ipTM=0.334 tol=5.43 2024-07-14 07:38:24,670 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=39.5 pTM=0.307 ipTM=0.317 tol=4.72 2024-07-14 07:45:40,181 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.3 pTM=0.306 ipTM=0.301 tol=4.09 2024-07-14 07:52:55,951 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=39.4 pTM=0.307 ipTM=0.31 tol=5.55 2024-07-14 08:00:11,900 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=39.5 pTM=0.307 ipTM=0.312 tol=4.49 2024-07-14 08:07:27,524 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39.4 pTM=0.307 ipTM=0.313 tol=3.48 2024-07-14 08:14:43,283 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.3 pTM=0.308 ipTM=0.309 tol=7.34 2024-07-14 08:21:59,218 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39.5 pTM=0.308 ipTM=0.314 tol=6.82 2024-07-14 08:29:15,028 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=39.4 pTM=0.308 ipTM=0.328 tol=6.88 2024-07-14 08:36:30,930 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=39.8 pTM=0.308 ipTM=0.331 tol=6.57 2024-07-14 08:43:46,669 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=39.2 pTM=0.306 ipTM=0.304 tol=6.22 2024-07-14 08:51:02,425 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.5 pTM=0.306 ipTM=0.302 tol=4.41 2024-07-14 08:58:18,251 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=39.7 pTM=0.307 ipTM=0.297 tol=6.55 2024-07-14 09:05:34,168 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=39.6 pTM=0.306 ipTM=0.298 tol=4.49 2024-07-14 09:12:50,030 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39.7 pTM=0.306 ipTM=0.285 tol=4.11 2024-07-14 09:20:05,907 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.7 pTM=0.306 ipTM=0.293 tol=10.3 2024-07-14 09:27:22,001 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.7 pTM=0.306 ipTM=0.289 tol=8.6 2024-07-14 09:34:38,272 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.7 pTM=0.306 ipTM=0.288 tol=3.59 2024-07-14 09:41:54,292 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.7 pTM=0.305 ipTM=0.281 tol=6.22 2024-07-14 09:49:10,036 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.9 pTM=0.307 ipTM=0.298 tol=5.29 2024-07-14 09:56:25,927 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.8 pTM=0.306 ipTM=0.288 tol=4.89 2024-07-14 10:03:41,821 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.7 pTM=0.305 ipTM=0.285 tol=7.21 2024-07-14 10:10:57,780 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.7 pTM=0.306 ipTM=0.292 tol=4.69 2024-07-14 10:18:13,662 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39.7 pTM=0.306 ipTM=0.286 tol=4.01 2024-07-14 10:25:29,247 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.6 pTM=0.306 ipTM=0.283 tol=4.69 2024-07-14 10:32:44,967 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.6 pTM=0.307 ipTM=0.29 tol=5.88 2024-07-14 10:32:44,971 alphafold2_multimer_v3_model_1_seed_000 took 13693.6s (30 recycles) 2024-07-14 10:40:05,335 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=36.2 pTM=0.299 ipTM=0.263 2024-07-14 10:47:21,533 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=40 pTM=0.302 ipTM=0.262 tol=15.8 2024-07-14 10:54:37,723 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.7 pTM=0.305 ipTM=0.251 tol=12.9 2024-07-14 11:01:53,993 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40.7 pTM=0.303 ipTM=0.251 tol=7.91 2024-07-14 11:09:10,231 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=40.7 pTM=0.303 ipTM=0.257 tol=6.89 2024-07-14 11:16:26,575 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40.8 pTM=0.303 ipTM=0.252 tol=4.47 2024-07-14 11:23:43,010 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=40.9 pTM=0.302 ipTM=0.253 tol=4.88 2024-07-14 11:30:59,340 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41 pTM=0.302 ipTM=0.253 tol=3.58 2024-07-14 11:38:15,899 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.2 pTM=0.302 ipTM=0.257 tol=4.04 2024-07-14 11:45:32,415 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41 pTM=0.301 ipTM=0.256 tol=3.53 2024-07-14 11:52:48,944 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.4 pTM=0.301 ipTM=0.258 tol=3.61 2024-07-14 12:00:05,194 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.1 pTM=0.301 ipTM=0.254 tol=3.32 2024-07-14 12:07:21,657 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.2 pTM=0.302 ipTM=0.255 tol=3.83 2024-07-14 12:14:38,242 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.4 pTM=0.302 ipTM=0.255 tol=3.38 2024-07-14 12:21:54,791 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.2 pTM=0.301 ipTM=0.253 tol=3.53 2024-07-14 12:29:11,251 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.3 pTM=0.301 ipTM=0.252 tol=4 2024-07-14 12:36:27,684 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.3 pTM=0.301 ipTM=0.25 tol=5.34 2024-07-14 12:43:44,144 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.5 pTM=0.301 ipTM=0.25 tol=6.04 2024-07-14 12:51:00,840 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.3 pTM=0.3 ipTM=0.253 tol=5.15 2024-07-14 12:58:17,372 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.4 pTM=0.3 ipTM=0.253 tol=4.25 2024-07-14 13:05:33,921 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.2 pTM=0.301 ipTM=0.254 tol=6.13 2024-07-14 13:12:50,478 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.3 pTM=0.301 ipTM=0.253 tol=5.25 2024-07-14 13:20:06,920 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.4 pTM=0.301 ipTM=0.252 tol=3.61 2024-07-14 13:27:23,422 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.3 pTM=0.3 ipTM=0.251 tol=4.08 2024-07-14 13:34:40,065 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.3 pTM=0.301 ipTM=0.251 tol=3.92 2024-07-14 13:41:56,507 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.2 pTM=0.301 ipTM=0.252 tol=4.66 2024-07-14 13:49:13,094 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.1 pTM=0.3 ipTM=0.254 tol=3.17 2024-07-14 13:56:29,729 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.2 pTM=0.301 ipTM=0.256 tol=3.46 2024-07-14 14:03:46,170 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.2 pTM=0.301 ipTM=0.254 tol=3.4 2024-07-14 14:11:02,770 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.3 pTM=0.301 ipTM=0.255 tol=3.05 2024-07-14 14:18:19,331 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.5 pTM=0.301 ipTM=0.254 tol=3.05 2024-07-14 14:18:19,335 alphafold2_multimer_v3_model_2_seed_000 took 13529.9s (30 recycles) 2024-07-14 14:25:41,912 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.6 pTM=0.301 ipTM=0.331 2024-07-14 14:33:00,164 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=35 pTM=0.301 ipTM=0.391 tol=32.1 2024-07-14 14:40:18,400 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=36.5 pTM=0.299 ipTM=0.337 tol=21.5 2024-07-14 14:47:36,653 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=37.3 pTM=0.3 ipTM=0.363 tol=19.2 2024-07-14 14:54:54,724 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=37.3 pTM=0.3 ipTM=0.337 tol=12 2024-07-14 15:02:13,068 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=37.7 pTM=0.301 ipTM=0.346 tol=13.3 2024-07-14 15:09:31,292 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=37.9 pTM=0.302 ipTM=0.341 tol=14.5 2024-07-14 15:16:49,635 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=38 pTM=0.3 ipTM=0.29 tol=10.7 2024-07-14 15:24:07,970 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=38.4 pTM=0.301 ipTM=0.292 tol=10.7 2024-07-14 15:31:26,260 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=38.5 pTM=0.301 ipTM=0.287 tol=11.7 2024-07-14 15:38:44,555 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=38.9 pTM=0.301 ipTM=0.293 tol=9.75 2024-07-14 15:46:03,122 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=38.8 pTM=0.3 ipTM=0.285 tol=9.65 2024-07-14 15:53:21,705 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=38.8 pTM=0.302 ipTM=0.3 tol=8.73 2024-07-14 16:00:40,427 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=38.8 pTM=0.301 ipTM=0.296 tol=8.91 2024-07-14 16:07:59,010 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=38.6 pTM=0.301 ipTM=0.313 tol=8.79 2024-07-14 16:15:17,580 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=38.7 pTM=0.302 ipTM=0.324 tol=8.7 2024-07-14 16:22:36,132 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=38.6 pTM=0.3 ipTM=0.302 tol=7.89 2024-07-14 16:29:54,849 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=38.9 pTM=0.3 ipTM=0.284 tol=6.78 2024-07-14 16:37:13,529 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=39 pTM=0.3 ipTM=0.29 tol=7.71 2024-07-14 16:44:32,061 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=38.9 pTM=0.3 ipTM=0.287 tol=9.4 2024-07-14 16:51:50,543 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=39 pTM=0.301 ipTM=0.295 tol=9.19 2024-07-14 16:59:08,886 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=38.9 pTM=0.301 ipTM=0.29 tol=6.49 2024-07-14 17:06:27,303 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=39.2 pTM=0.301 ipTM=0.304 tol=6.21 2024-07-14 17:13:45,198 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=38.8 pTM=0.301 ipTM=0.298 tol=7.98 2024-07-14 17:21:03,480 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=39.3 pTM=0.302 ipTM=0.31 tol=7.99 2024-07-14 17:28:21,927 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=39.6 pTM=0.3 ipTM=0.281 tol=11 2024-07-14 17:35:40,338 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=39.3 pTM=0.3 ipTM=0.295 tol=9.82 2024-07-14 17:42:58,721 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=39.4 pTM=0.301 ipTM=0.319 tol=7.43 2024-07-14 17:50:17,005 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=39.4 pTM=0.302 ipTM=0.321 tol=6.39 2024-07-14 17:57:35,377 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=39.3 pTM=0.302 ipTM=0.321 tol=4.54 2024-07-14 18:04:53,660 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=39.5 pTM=0.3 ipTM=0.285 tol=6.55 2024-07-14 18:04:53,664 alphafold2_multimer_v3_model_3_seed_000 took 13589.6s (30 recycles) 2024-07-14 18:12:15,945 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=33.8 pTM=0.295 ipTM=0.264 2024-07-14 18:19:34,393 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=36.6 pTM=0.3 ipTM=0.301 tol=19.6 2024-07-14 18:26:53,028 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=37.2 pTM=0.299 ipTM=0.292 tol=16.9 2024-07-14 18:34:11,489 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37 pTM=0.3 ipTM=0.307 tol=14.4 2024-07-14 18:41:29,938 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=37 pTM=0.299 ipTM=0.293 tol=11.6 2024-07-14 18:48:48,611 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=37.2 pTM=0.3 ipTM=0.296 tol=13.8 2024-07-14 18:56:07,191 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=37.7 pTM=0.3 ipTM=0.296 tol=14.3 2024-07-14 19:03:25,682 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=37.4 pTM=0.299 ipTM=0.294 tol=8.79 2024-07-14 19:10:44,088 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=37.8 pTM=0.3 ipTM=0.295 tol=8.58 2024-07-14 19:18:02,799 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=37.8 pTM=0.299 ipTM=0.291 tol=13.1 2024-07-14 19:25:21,711 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38.1 pTM=0.299 ipTM=0.29 tol=13.2 2024-07-14 19:32:40,457 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.2 pTM=0.298 ipTM=0.289 tol=11.3 2024-07-14 19:39:59,328 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=38.1 pTM=0.3 ipTM=0.29 tol=11.8 2024-07-14 19:47:18,009 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38.2 pTM=0.301 ipTM=0.306 tol=9.4 2024-07-14 19:54:36,844 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=38.2 pTM=0.299 ipTM=0.291 tol=8.66 2024-07-14 20:01:55,610 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=38.4 pTM=0.299 ipTM=0.296 tol=7.66 2024-07-14 20:09:14,420 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=38.1 pTM=0.3 ipTM=0.287 tol=10.9 2024-07-14 20:16:33,196 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=38.3 pTM=0.299 ipTM=0.283 tol=7.31 2024-07-14 20:23:51,975 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=38.4 pTM=0.3 ipTM=0.297 tol=6.84 2024-07-14 20:31:10,901 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=38.5 pTM=0.299 ipTM=0.289 tol=16.8 2024-07-14 20:38:29,796 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=38.4 pTM=0.299 ipTM=0.287 tol=12.1 2024-07-14 20:45:48,625 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=38.5 pTM=0.298 ipTM=0.288 tol=9.88 2024-07-14 20:53:07,566 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=38.5 pTM=0.3 ipTM=0.296 tol=9 2024-07-14 21:00:26,224 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=38.2 pTM=0.299 ipTM=0.29 tol=6.21 2024-07-14 21:07:45,059 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=38.6 pTM=0.3 ipTM=0.292 tol=6.27 2024-07-14 21:15:03,722 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=38.3 pTM=0.3 ipTM=0.288 tol=5.85 2024-07-14 21:22:22,680 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=38.1 pTM=0.299 ipTM=0.29 tol=11.1 2024-07-14 21:29:41,435 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=38.2 pTM=0.3 ipTM=0.292 tol=9.98 2024-07-14 21:37:00,267 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=38.4 pTM=0.3 ipTM=0.292 tol=8.08 2024-07-14 21:44:19,146 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=38.4 pTM=0.299 ipTM=0.288 tol=6.74 2024-07-14 21:51:38,077 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=38.6 pTM=0.299 ipTM=0.29 tol=6.51 2024-07-14 21:51:38,081 alphafold2_multimer_v3_model_4_seed_000 took 13599.9s (30 recycles) 2024-07-14 21:59:00,436 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=33.5 pTM=0.289 ipTM=0.252 2024-07-14 22:06:18,853 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=37 pTM=0.293 ipTM=0.271 tol=22.4 2024-07-14 22:13:37,403 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=37.3 pTM=0.296 ipTM=0.272 tol=14 2024-07-14 22:20:55,859 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=37.7 pTM=0.296 ipTM=0.271 tol=20.9 2024-07-14 22:28:14,507 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=37.5 pTM=0.294 ipTM=0.271 tol=17.5 2024-07-14 22:35:33,165 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=37.7 pTM=0.294 ipTM=0.272 tol=16 2024-07-14 22:42:51,861 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=37.8 pTM=0.294 ipTM=0.272 tol=15.4 2024-07-14 22:50:10,654 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=37.8 pTM=0.294 ipTM=0.274 tol=17 2024-07-14 22:57:29,254 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=37.9 pTM=0.293 ipTM=0.266 tol=11.7 2024-07-14 23:04:47,713 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=37.8 pTM=0.294 ipTM=0.27 tol=11.5 2024-07-14 23:12:05,977 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=38.2 pTM=0.294 ipTM=0.272 tol=8.87 2024-07-14 23:19:24,326 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=37.6 pTM=0.295 ipTM=0.271 tol=18.8 2024-07-14 23:26:42,875 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=37.4 pTM=0.294 ipTM=0.267 tol=15.4 2024-07-14 23:34:01,553 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=38 pTM=0.294 ipTM=0.274 tol=13.4 2024-07-14 23:41:20,203 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=37.8 pTM=0.296 ipTM=0.277 tol=15.9 2024-07-14 23:48:38,781 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=37.7 pTM=0.294 ipTM=0.267 tol=11.2 2024-07-14 23:55:57,254 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=37.5 pTM=0.295 ipTM=0.272 tol=18.5 2024-07-15 00:03:16,124 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=37.8 pTM=0.294 ipTM=0.265 tol=16.5 2024-07-15 00:10:34,685 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=37.8 pTM=0.294 ipTM=0.264 tol=14.9 2024-07-15 00:17:53,257 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=37.9 pTM=0.294 ipTM=0.263 tol=11.1 2024-07-15 00:25:11,611 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=37.8 pTM=0.296 ipTM=0.265 tol=15.4 2024-07-15 00:32:30,140 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=37.6 pTM=0.294 ipTM=0.265 tol=17.4 2024-07-15 00:39:48,800 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=38 pTM=0.294 ipTM=0.26 tol=13.5 2024-07-15 00:47:07,651 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=37.9 pTM=0.294 ipTM=0.26 tol=9.78 2024-07-15 00:54:26,144 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=38.1 pTM=0.294 ipTM=0.26 tol=9.41 2024-07-15 01:01:44,415 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=37.9 pTM=0.294 ipTM=0.259 tol=10.5 2024-07-15 01:09:02,909 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=37.8 pTM=0.294 ipTM=0.259 tol=13.3 2024-07-15 01:16:21,588 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=38 pTM=0.294 ipTM=0.26 tol=17.4 2024-07-15 01:23:40,354 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=38.1 pTM=0.293 ipTM=0.259 tol=14.5 2024-07-15 01:30:58,992 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=37.8 pTM=0.294 ipTM=0.265 tol=10.8 2024-07-15 01:38:17,681 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=37.9 pTM=0.293 ipTM=0.259 tol=11.7 2024-07-15 01:38:17,686 alphafold2_multimer_v3_model_5_seed_000 took 13595.1s (30 recycles) 2024-07-15 01:38:22,192 reranking models by 'multimer' metric 2024-07-15 01:38:25,169 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-15 01:57:59,051 Relaxation took 1176.9s 2024-07-15 01:57:59,051 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.6 pTM=0.307 ipTM=0.29 2024-07-15 02:13:55,140 Relaxation took 956.1s 2024-07-15 02:13:55,141 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=38.6 pTM=0.299 ipTM=0.29 2024-07-15 02:36:10,239 Relaxation took 1335.1s 2024-07-15 02:36:10,240 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=39.5 pTM=0.3 ipTM=0.285 2024-07-15 02:55:09,463 Relaxation took 1139.2s 2024-07-15 02:55:09,463 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=37.9 pTM=0.293 ipTM=0.259 2024-07-15 03:07:48,722 Relaxation took 759.3s 2024-07-15 03:07:48,723 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.5 pTM=0.301 ipTM=0.254 2024-07-15 03:07:57,862 Done