2024-07-14 10:08:35,952 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-14 10:08:36,276 Running on GPU 2024-07-14 10:08:39,985 Found 6 citations for tools or databases 2024-07-14 10:08:39,985 Query 1/1: ZO2_BACH2 (length 2031) 2024-07-14 10:08:40,425 Sleeping for 7s. Reason: PENDING 2024-07-14 10:08:47,849 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:08:55,262 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:09:05,691 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:09:12,115 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:09:17,524 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:09:25,947 Sleeping for 9s. Reason: RUNNING 2024-07-14 10:09:35,379 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:09:40,823 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:09:48,233 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:09:56,660 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:10:04,080 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:10:12,504 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:10:18,908 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:10:27,340 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:10:32,759 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:10:40,188 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:10:47,609 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:10:54,029 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:11:01,468 Sleeping for 9s. Reason: RUNNING 2024-07-14 10:11:10,881 Sleeping for 9s. Reason: RUNNING 2024-07-14 10:11:20,314 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:11:25,732 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:11:31,154 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:11:37,582 Sleeping for 9s. Reason: RUNNING 2024-07-14 10:11:47,017 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:11:57,455 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:12:03,868 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:12:12,288 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:12:19,705 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:12:28,150 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:12:35,588 Sleeping for 9s. Reason: RUNNING 2024-07-14 10:12:45,011 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:12:57,328 Sleeping for 8s. Reason: PENDING 2024-07-14 10:13:05,744 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:13:14,164 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:13:19,583 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:13:27,996 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:13:35,435 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:13:43,849 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:13:52,275 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:14:02,715 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:14:11,171 Sleeping for 9s. Reason: RUNNING 2024-07-14 10:14:20,582 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:14:31,015 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:14:37,432 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:14:43,851 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:14:49,282 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:14:57,713 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:15:06,146 Sleeping for 8s. Reason: RUNNING 2024-07-14 10:15:14,579 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:15:25,012 Sleeping for 10s. Reason: RUNNING 2024-07-14 10:15:35,440 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:15:42,863 Sleeping for 7s. Reason: RUNNING 2024-07-14 10:15:50,289 Sleeping for 5s. Reason: RUNNING 2024-07-14 10:15:55,720 Sleeping for 6s. Reason: RUNNING 2024-07-14 10:16:08,379 Setting max_seq=508, max_extra_seq=2048 2024-07-14 10:21:50,499 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=38.5 pTM=0.326 ipTM=0.196 2024-07-14 10:24:38,825 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=38.9 pTM=0.331 ipTM=0.285 tol=15.2 2024-07-14 10:27:27,092 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=38.8 pTM=0.329 ipTM=0.226 tol=11.2 2024-07-14 10:30:15,425 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=39.2 pTM=0.33 ipTM=0.239 tol=10 2024-07-14 10:33:03,706 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.1 pTM=0.33 ipTM=0.248 tol=7.29 2024-07-14 10:35:51,987 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=39.3 pTM=0.331 ipTM=0.247 tol=9.7 2024-07-14 10:38:40,273 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=39.3 pTM=0.332 ipTM=0.23 tol=7.54 2024-07-14 10:41:28,547 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.4 pTM=0.332 ipTM=0.239 tol=6.68 2024-07-14 10:44:16,783 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=39.5 pTM=0.333 ipTM=0.224 tol=6.39 2024-07-14 10:47:04,930 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=39.4 pTM=0.333 ipTM=0.246 tol=6.13 2024-07-14 10:49:53,103 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39.3 pTM=0.333 ipTM=0.236 tol=7.63 2024-07-14 10:52:41,313 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.3 pTM=0.333 ipTM=0.244 tol=6.89 2024-07-14 10:55:29,513 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39.2 pTM=0.333 ipTM=0.24 tol=5.5 2024-07-14 10:58:17,775 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=39.3 pTM=0.332 ipTM=0.242 tol=6.86 2024-07-14 11:01:06,119 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=39.2 pTM=0.333 ipTM=0.219 tol=7.54 2024-07-14 11:03:54,368 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=39.4 pTM=0.333 ipTM=0.238 tol=5.25 2024-07-14 11:06:42,634 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.3 pTM=0.333 ipTM=0.23 tol=4.61 2024-07-14 11:09:30,837 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=39.6 pTM=0.333 ipTM=0.249 tol=6.93 2024-07-14 11:12:19,097 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=39.3 pTM=0.332 ipTM=0.233 tol=8.12 2024-07-14 11:15:07,395 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39.4 pTM=0.333 ipTM=0.243 tol=9.83 2024-07-14 11:17:55,625 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.3 pTM=0.333 ipTM=0.22 tol=12 2024-07-14 11:20:43,850 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.3 pTM=0.333 ipTM=0.233 tol=5.3 2024-07-14 11:23:32,070 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.2 pTM=0.332 ipTM=0.224 tol=6.7 2024-07-14 11:26:20,270 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.2 pTM=0.332 ipTM=0.238 tol=6.23 2024-07-14 11:29:08,471 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.2 pTM=0.333 ipTM=0.221 tol=3.72 2024-07-14 11:31:56,634 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.3 pTM=0.333 ipTM=0.239 tol=4.62 2024-07-14 11:34:44,837 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.2 pTM=0.333 ipTM=0.238 tol=3.44 2024-07-14 11:37:33,133 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.5 pTM=0.334 ipTM=0.245 tol=7.14 2024-07-14 11:40:21,399 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39.2 pTM=0.333 ipTM=0.233 tol=7.5 2024-07-14 11:43:09,620 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.3 pTM=0.333 ipTM=0.238 tol=3.51 2024-07-14 11:45:57,809 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.2 pTM=0.333 ipTM=0.231 tol=3.81 2024-07-14 11:45:57,811 alphafold2_multimer_v3_model_1_seed_000 took 5384.0s (30 recycles) 2024-07-14 11:48:48,460 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=39.3 pTM=0.337 ipTM=0.201 2024-07-14 11:51:36,819 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.7 pTM=0.345 ipTM=0.264 tol=19.4 2024-07-14 11:54:25,154 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.6 pTM=0.342 ipTM=0.234 tol=14.6 2024-07-14 11:57:13,582 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.7 pTM=0.341 ipTM=0.254 tol=7.89 2024-07-14 12:00:02,071 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.6 pTM=0.339 ipTM=0.235 tol=8.59 2024-07-14 12:02:50,530 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.7 pTM=0.34 ipTM=0.273 tol=9.23 2024-07-14 12:05:39,056 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.8 pTM=0.338 ipTM=0.233 tol=7.02 2024-07-14 12:08:27,506 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.8 pTM=0.34 ipTM=0.277 tol=6.95 2024-07-14 12:11:16,015 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42 pTM=0.339 ipTM=0.228 tol=6.08 2024-07-14 12:14:04,498 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42 pTM=0.341 ipTM=0.295 tol=4.23 2024-07-14 12:16:52,917 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.9 pTM=0.341 ipTM=0.237 tol=4.18 2024-07-14 12:19:41,356 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42 pTM=0.341 ipTM=0.259 tol=4.09 2024-07-14 12:22:29,801 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.8 pTM=0.34 ipTM=0.23 tol=3.79 2024-07-14 12:25:18,244 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.9 pTM=0.34 ipTM=0.266 tol=3.12 2024-07-14 12:28:06,628 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42 pTM=0.34 ipTM=0.231 tol=3.05 2024-07-14 12:30:54,931 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=42 pTM=0.34 ipTM=0.249 tol=2.46 2024-07-14 12:33:43,276 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.1 pTM=0.339 ipTM=0.224 tol=3.06 2024-07-14 12:36:31,683 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.1 pTM=0.34 ipTM=0.262 tol=3.47 2024-07-14 12:39:20,070 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.8 pTM=0.339 ipTM=0.225 tol=2.71 2024-07-14 12:42:08,458 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.8 pTM=0.34 ipTM=0.261 tol=3.02 2024-07-14 12:44:56,835 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.8 pTM=0.34 ipTM=0.223 tol=2.94 2024-07-14 12:47:45,202 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.8 pTM=0.34 ipTM=0.255 tol=2.93 2024-07-14 12:50:33,604 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.9 pTM=0.339 ipTM=0.221 tol=2.5 2024-07-14 12:53:22,016 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.8 pTM=0.339 ipTM=0.236 tol=2.73 2024-07-14 12:56:10,442 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.8 pTM=0.339 ipTM=0.217 tol=3.33 2024-07-14 12:58:58,852 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.9 pTM=0.339 ipTM=0.259 tol=3.21 2024-07-14 13:01:47,347 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.9 pTM=0.339 ipTM=0.228 tol=3.35 2024-07-14 13:04:35,821 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.2 pTM=0.34 ipTM=0.243 tol=3.4 2024-07-14 13:07:24,234 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.1 pTM=0.339 ipTM=0.218 tol=3.13 2024-07-14 13:10:12,613 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.8 pTM=0.339 ipTM=0.232 tol=2.88 2024-07-14 13:13:00,992 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42 pTM=0.339 ipTM=0.212 tol=2.91 2024-07-14 13:13:00,994 alphafold2_multimer_v3_model_2_seed_000 took 5220.8s (30 recycles) 2024-07-14 13:15:52,347 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=39.6 pTM=0.339 ipTM=0.202 2024-07-14 13:18:41,381 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.1 pTM=0.342 ipTM=0.325 tol=18.2 2024-07-14 13:21:30,444 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.1 pTM=0.34 ipTM=0.234 tol=12.1 2024-07-14 13:24:19,516 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=40.7 pTM=0.342 ipTM=0.299 tol=12.6 2024-07-14 13:27:08,538 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41 pTM=0.342 ipTM=0.24 tol=9.61 2024-07-14 13:29:57,629 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41 pTM=0.342 ipTM=0.304 tol=5.96 2024-07-14 13:32:46,709 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41 pTM=0.341 ipTM=0.239 tol=4.04 2024-07-14 13:35:35,695 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.2 pTM=0.342 ipTM=0.293 tol=4.6 2024-07-14 13:38:24,685 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.1 pTM=0.341 ipTM=0.231 tol=4.75 2024-07-14 13:41:13,708 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.2 pTM=0.343 ipTM=0.284 tol=4.38 2024-07-14 13:44:02,630 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.1 pTM=0.341 ipTM=0.234 tol=4.71 2024-07-14 13:46:51,612 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41 pTM=0.342 ipTM=0.29 tol=17.2 2024-07-14 13:49:40,669 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=40.8 pTM=0.34 ipTM=0.228 tol=11.2 2024-07-14 13:52:29,729 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=40.9 pTM=0.341 ipTM=0.26 tol=7.14 2024-07-14 13:55:18,777 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41 pTM=0.341 ipTM=0.222 tol=5.82 2024-07-14 13:58:07,813 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41 pTM=0.341 ipTM=0.272 tol=14.9 2024-07-14 14:00:56,906 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=40.8 pTM=0.339 ipTM=0.225 tol=10.7 2024-07-14 14:03:45,888 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=40.9 pTM=0.342 ipTM=0.279 tol=4.69 2024-07-14 14:06:34,918 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=40.9 pTM=0.34 ipTM=0.226 tol=4.95 2024-07-14 14:09:23,995 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=40.9 pTM=0.34 ipTM=0.252 tol=6.36 2024-07-14 14:12:12,975 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=40.9 pTM=0.34 ipTM=0.222 tol=9.24 2024-07-14 14:15:01,979 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41 pTM=0.341 ipTM=0.238 tol=6.35 2024-07-14 14:17:50,919 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=40.9 pTM=0.341 ipTM=0.227 tol=5.32 2024-07-14 14:20:39,882 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41 pTM=0.342 ipTM=0.271 tol=5.45 2024-07-14 14:23:28,903 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41 pTM=0.341 ipTM=0.221 tol=4.91 2024-07-14 14:26:17,872 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41 pTM=0.341 ipTM=0.237 tol=4.5 2024-07-14 14:29:06,825 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41 pTM=0.341 ipTM=0.238 tol=4.95 2024-07-14 14:31:55,867 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.2 pTM=0.342 ipTM=0.26 tol=5.51 2024-07-14 14:34:44,864 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41 pTM=0.341 ipTM=0.231 tol=11.9 2024-07-14 14:37:33,844 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.2 pTM=0.343 ipTM=0.285 tol=3.81 2024-07-14 14:40:22,879 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.2 pTM=0.342 ipTM=0.233 tol=13.3 2024-07-14 14:40:22,881 alphafold2_multimer_v3_model_3_seed_000 took 5239.5s (30 recycles) 2024-07-14 14:43:14,761 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38.5 pTM=0.322 ipTM=0.183 2024-07-14 14:46:04,251 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=38.3 pTM=0.331 ipTM=0.197 tol=21 2024-07-14 14:48:53,752 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.3 pTM=0.335 ipTM=0.197 tol=16.2 2024-07-14 14:51:43,195 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=38 pTM=0.337 ipTM=0.204 tol=21.8 2024-07-14 14:54:32,669 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.2 pTM=0.336 ipTM=0.197 tol=12.9 2024-07-14 14:57:22,141 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38.6 pTM=0.335 ipTM=0.196 tol=12 2024-07-14 15:00:11,691 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=38.4 pTM=0.336 ipTM=0.197 tol=12.4 2024-07-14 15:03:01,092 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=38.7 pTM=0.336 ipTM=0.197 tol=9.97 2024-07-14 15:05:50,502 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=38.9 pTM=0.334 ipTM=0.195 tol=9.7 2024-07-14 15:08:39,940 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38.9 pTM=0.334 ipTM=0.195 tol=8.73 2024-07-14 15:11:29,531 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38.8 pTM=0.332 ipTM=0.193 tol=10.1 2024-07-14 15:14:18,967 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.8 pTM=0.333 ipTM=0.197 tol=12.2 2024-07-14 15:17:08,463 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=38.9 pTM=0.332 ipTM=0.194 tol=11.5 2024-07-14 15:19:57,976 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38.9 pTM=0.332 ipTM=0.197 tol=7.9 2024-07-14 15:22:47,558 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39 pTM=0.332 ipTM=0.196 tol=7.63 2024-07-14 15:25:37,017 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39.2 pTM=0.332 ipTM=0.196 tol=7.97 2024-07-14 15:28:26,480 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.2 pTM=0.331 ipTM=0.196 tol=7.72 2024-07-14 15:31:15,986 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.2 pTM=0.332 ipTM=0.195 tol=9.12 2024-07-14 15:34:05,443 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.2 pTM=0.331 ipTM=0.198 tol=9.05 2024-07-14 15:36:54,888 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.2 pTM=0.331 ipTM=0.196 tol=8.02 2024-07-14 15:39:44,349 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.3 pTM=0.332 ipTM=0.197 tol=8.55 2024-07-14 15:42:33,853 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39.3 pTM=0.33 ipTM=0.198 tol=8.77 2024-07-14 15:45:23,236 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.4 pTM=0.33 ipTM=0.2 tol=7.66 2024-07-14 15:48:12,884 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.2 pTM=0.33 ipTM=0.197 tol=9.69 2024-07-14 15:51:02,423 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.2 pTM=0.33 ipTM=0.2 tol=8.91 2024-07-14 15:53:51,953 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.1 pTM=0.329 ipTM=0.197 tol=9.75 2024-07-14 15:56:41,425 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.1 pTM=0.33 ipTM=0.198 tol=15.5 2024-07-14 15:59:30,999 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.4 pTM=0.33 ipTM=0.196 tol=16.2 2024-07-14 16:02:20,497 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.2 pTM=0.331 ipTM=0.2 tol=9.84 2024-07-14 16:05:09,953 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.2 pTM=0.329 ipTM=0.197 tol=7.01 2024-07-14 16:07:59,386 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39.2 pTM=0.331 ipTM=0.198 tol=7.77 2024-07-14 16:07:59,389 alphafold2_multimer_v3_model_4_seed_000 took 5254.0s (30 recycles) 2024-07-14 16:10:50,932 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=39.8 pTM=0.328 ipTM=0.192 2024-07-14 16:13:40,254 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=39.8 pTM=0.334 ipTM=0.199 tol=20.9 2024-07-14 16:16:29,522 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.4 pTM=0.337 ipTM=0.285 tol=15.2 2024-07-14 16:19:18,755 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.3 pTM=0.338 ipTM=0.212 tol=15.2 2024-07-14 16:22:07,943 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=40.4 pTM=0.338 ipTM=0.283 tol=12.6 2024-07-14 16:24:57,145 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40.4 pTM=0.338 ipTM=0.237 tol=12.9 2024-07-14 16:27:46,328 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.6 pTM=0.338 ipTM=0.263 tol=6.8 2024-07-14 16:30:35,455 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=40.6 pTM=0.337 ipTM=0.223 tol=4.83 2024-07-14 16:33:24,649 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=40.8 pTM=0.339 ipTM=0.286 tol=4.86 2024-07-14 16:36:13,935 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=40.8 pTM=0.339 ipTM=0.245 tol=5.95 2024-07-14 16:39:03,033 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=40.8 pTM=0.34 ipTM=0.291 tol=9.52 2024-07-14 16:41:52,114 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=40.6 pTM=0.338 ipTM=0.235 tol=9.74 2024-07-14 16:44:41,232 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=40.8 pTM=0.34 ipTM=0.294 tol=11.8 2024-07-14 16:47:30,333 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=40.8 pTM=0.34 ipTM=0.243 tol=6.29 2024-07-14 16:50:19,553 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=40.9 pTM=0.341 ipTM=0.292 tol=7.97 2024-07-14 16:53:08,694 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=40.8 pTM=0.339 ipTM=0.238 tol=6.25 2024-07-14 16:55:57,833 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=40.8 pTM=0.34 ipTM=0.285 tol=6.39 2024-07-14 16:58:46,985 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=40.7 pTM=0.34 ipTM=0.249 tol=8.46 2024-07-14 17:01:36,187 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=40.7 pTM=0.34 ipTM=0.274 tol=13 2024-07-14 17:04:25,390 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=40.6 pTM=0.339 ipTM=0.219 tol=10.6 2024-07-14 17:07:14,557 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=40.6 pTM=0.34 ipTM=0.249 tol=12.4 2024-07-14 17:10:03,753 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=40.5 pTM=0.339 ipTM=0.241 tol=11.6 2024-07-14 17:12:52,940 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=40.5 pTM=0.339 ipTM=0.251 tol=11.9 2024-07-14 17:15:42,118 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=40.5 pTM=0.338 ipTM=0.223 tol=6.99 2024-07-14 17:18:31,231 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=40.7 pTM=0.339 ipTM=0.266 tol=6.38 2024-07-14 17:21:20,361 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=40.5 pTM=0.339 ipTM=0.237 tol=5.51 2024-07-14 17:24:09,471 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=40.6 pTM=0.339 ipTM=0.261 tol=7.07 2024-07-14 17:26:58,631 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=40.7 pTM=0.339 ipTM=0.231 tol=13.1 2024-07-14 17:29:47,816 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=40.5 pTM=0.34 ipTM=0.292 tol=8.13 2024-07-14 17:32:36,991 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=40.6 pTM=0.34 ipTM=0.244 tol=6.39 2024-07-14 17:35:26,214 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=40.8 pTM=0.341 ipTM=0.293 tol=14.3 2024-07-14 17:35:26,216 alphafold2_multimer_v3_model_5_seed_000 took 5244.5s (30 recycles) 2024-07-14 17:35:28,592 reranking models by 'multimer' metric 2024-07-14 17:35:33,123 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-14 17:41:22,221 Relaxation took 353.6s 2024-07-14 17:41:22,221 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=40.8 pTM=0.341 ipTM=0.293 2024-07-14 17:47:26,441 Relaxation took 364.2s 2024-07-14 17:47:26,441 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.2 pTM=0.342 ipTM=0.233 2024-07-14 17:52:32,480 Relaxation took 306.0s 2024-07-14 17:52:32,480 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.2 pTM=0.333 ipTM=0.231 2024-07-14 17:57:45,614 Relaxation took 313.1s 2024-07-14 17:57:45,614 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42 pTM=0.339 ipTM=0.212 2024-07-14 18:03:25,690 Relaxation took 340.1s 2024-07-14 18:03:25,690 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39.2 pTM=0.331 ipTM=0.198 2024-07-14 18:03:30,843 Done