peak_id	peak_chr	peak_start	peak_end	ensembl_id	gene_short_name	ensembl_transcript_id	biotype	strand
chr1_3206330_3206546	chr1	3206330	3206546	ENSMUSG00000051951.5	Xkr4	ENSMUST00000162897.1	processed_transcript	-
chr1_3456171_3457239	chr1	3456171	3457239	ENSMUSG00000089699.1	Gm1992	ENSMUST00000161581.1	antisense	+
chr1_3660494_3662750	chr1	3660494	3662750	ENSMUSG00000051951.5	Xkr4	ENSMUST00000070533.4	protein_coding	-
chr1_4486198_4487697	chr1	4486198	4487697	ENSMUSG00000025902.7	Sox17	ENSMUST00000116652.2	protein_coding	-
chr1_4486198_4487697	chr1	4486198	4487697	ENSMUSG00000025902.7	Sox17	ENSMUST00000027035.3	protein_coding	-
chr1_4712335_4713268	chr1	4712335	4713268	ENSMUSG00000088000.1	U6	ENSMUST00000157375.1	snRNA	-
chr1_4775078_4776432	chr1	4775078	4776432	ENSMUSG00000033845.7	Mrpl15	ENSMUST00000132625.1	retained_intron	-
chr1_4775078_4776432	chr1	4775078	4776432	ENSMUSG00000033845.7	Mrpl15	ENSMUST00000146665.1	processed_transcript	-
chr1_4775078_4776432	chr1	4775078	4776432	ENSMUSG00000033845.7	Mrpl15	ENSMUST00000115538.3	processed_transcript	-
chr1_4775078_4776432	chr1	4775078	4776432	ENSMUSG00000033845.7	Mrpl15	ENSMUST00000045689.7	nonsense_mediated_decay	-
chr1_4775078_4776432	chr1	4775078	4776432	ENSMUSG00000033845.7	Mrpl15	ENSMUST00000156816.1	protein_coding	-
chr1_4775078_4776432	chr1	4775078	4776432	ENSMUSG00000033845.7	Mrpl15	ENSMUST00000130201.1	protein_coding	-
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000134384.1	nonsense_mediated_decay	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000027036.4	protein_coding	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000155020.1	nonsense_mediated_decay	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000119612.2	processed_transcript	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000137887.1	protein_coding	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000115529.1	protein_coding	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000150971.1	retained_intron	+
chr1_4797350_4799334	chr1	4797350	4799334	ENSMUSG00000025903.8	Lypla1	ENSMUST00000131119.1	protein_coding	+
chr1_4847147_4848972	chr1	4847147	4848972	ENSMUSG00000033813.8	Tcea1	ENSMUST00000081551.6	protein_coding	+
chr1_4847147_4848972	chr1	4847147	4848972	ENSMUSG00000033813.8	Tcea1	ENSMUST00000165720.1	protein_coding	+
chr1_4916081_4917409	chr1	4916081	4917409	ENSMUSG00000091305.1	Gm17100	ENSMUST00000168963.1	transcribed_processed_pseudogene	-
chr1_4960615_4961597	chr1	4960615	4961597	ENSMUSG00000085623.1	Gm16041	ENSMUST00000144339.1	antisense	+
chr1_5008531_5011124	chr1	5008531	5011124	ENSMUSG00000002459.10	Rgs20	ENSMUST00000156289.1	retained_intron	-
chr1_5008531_5011124	chr1	5008531	5011124	ENSMUSG00000002459.10	Rgs20	ENSMUST00000170566.1	nonsense_mediated_decay	-
chr1_5008531_5011124	chr1	5008531	5011124	ENSMUSG00000002459.10	Rgs20	ENSMUST00000119256.1	protein_coding	-
chr1_5008531_5011124	chr1	5008531	5011124	ENSMUSG00000002459.10	Rgs20	ENSMUST00000165589.1	protein_coding	-
chr1_5008531_5011124	chr1	5008531	5011124	ENSMUSG00000002459.10	Rgs20	ENSMUST00000002533.8	protein_coding	-
chr1_5060128_5061019	chr1	5060128	5061019	ENSMUSG00000002459.10	Rgs20	ENSMUST00000133521.1	processed_transcript	-
chr1_5060128_5061019	chr1	5060128	5061019	ENSMUSG00000002459.10	Rgs20	ENSMUST00000147158.1	protein_coding	-
chr1_5060128_5061019	chr1	5060128	5061019	ENSMUSG00000002459.10	Rgs20	ENSMUST00000118000.1	protein_coding	-
chr1_5072669_5073910	chr1	5072669	5073910	ENSMUSG00000033793.7	Atp6v1h	ENSMUST00000044369.7	protein_coding	+
chr1_5578329_5579224	chr1	5578329	5579224	ENSMUSG00000025905.7	Oprk1	ENSMUST00000160777.1	protein_coding	+
chr1_5578329_5579224	chr1	5578329	5579224	ENSMUSG00000025905.7	Oprk1	ENSMUST00000027038.4	protein_coding	+
chr1_5578329_5579224	chr1	5578329	5579224	ENSMUSG00000025905.7	Oprk1	ENSMUST00000160339.1	protein_coding	+
chr1_5905398_5908169	chr1	5905398	5908169	ENSMUSG00000033774.4	Npbwr1	ENSMUST00000044180.4	protein_coding	-
chr1_6203900_6205867	chr1	6203900	6205867	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000027040.6	protein_coding	+
chr1_6203900_6205867	chr1	6203900	6205867	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000167867.1	protein_coding	+
chr1_6203900_6205867	chr1	6203900	6205867	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000162210.1	retained_intron	+
chr1_6203900_6205867	chr1	6203900	6205867	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000160062.1	protein_coding	+
chr1_6203900_6205867	chr1	6203900	6205867	ENSMUSG00000073741.1	4732440D04Rik	ENSMUST00000097832.1	protein_coding	-
chr1_6203900_6205867	chr1	6203900	6205867	ENSMUSG00000090031.1	4732440D04Rik	ENSMUST00000159618.1	antisense	-
chr1_6250692_6251510	chr1	6250692	6251510	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000161183.1	retained_intron	+
chr1_6252383_6253554	chr1	6252383	6253554	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000159349.1	retained_intron	+
chr1_6252383_6253554	chr1	6252383	6253554	ENSMUSG00000025907.7	Rb1cc1	ENSMUST00000159530.1	protein_coding	+
chr1_6348812_6350016	chr1	6348812	6350016	ENSMUSG00000087247.1	Fam150a	ENSMUST00000133144.1	lincRNA	+
chr1_6477029_6477516	chr1	6477029	6477516	ENSMUSG00000033740.10	St18	ENSMUST00000140079.1	protein_coding	+
chr1_6477029_6477516	chr1	6477029	6477516	ENSMUSG00000033740.10	St18	ENSMUST00000131494.1	protein_coding	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000043578.6	protein_coding	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000139756.1	processed_transcript	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000131467.1	protein_coding	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000150761.1	protein_coding	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000151281.1	protein_coding	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000124167.1	processed_transcript	+
chr1_6719263_6720294	chr1	6719263	6720294	ENSMUSG00000033740.10	St18	ENSMUST00000155921.1	protein_coding	+
chr1_6724729_6725152	chr1	6724729	6725152	ENSMUSG00000033740.10	St18	ENSMUST00000139838.1	protein_coding	+
chr1_7078025_7080199	chr1	7078025	7080199	ENSMUSG00000051285.9	Pcmtd1	ENSMUST00000172291.1	protein_coding	+
chr1_7078025_7080199	chr1	7078025	7080199	ENSMUSG00000051285.9	Pcmtd1	ENSMUST00000061280.9	protein_coding	+
chr1_7386810_7388736	chr1	7386810	7388736	ENSMUSG00000086461.2	Gm16899	ENSMUST00000138711.1	lincRNA	-
chr1_8458697_8459217	chr1	8458697	8459217	ENSMUSG00000086235.1	Gm16284	ENSMUST00000140995.1	transcribed_processed_pseudogene	-
chr1_8460298_8461502	chr1	8460298	8461502	ENSMUSG00000025909.9	Sntg1	ENSMUST00000135046.1	protein_coding	-
chr1_8460298_8461502	chr1	8460298	8461502	ENSMUSG00000025909.9	Sntg1	ENSMUST00000115484.2	protein_coding	-
chr1_9288324_9290486	chr1	9288324	9290486	ENSMUSG00000025909.9	Sntg1	ENSMUST00000126083.1	processed_transcript	-
chr1_9288324_9290486	chr1	9288324	9290486	ENSMUSG00000025909.9	Sntg1	ENSMUST00000134075.1	retained_intron	-
chr1_9288324_9290486	chr1	9288324	9290486	ENSMUSG00000025909.9	Sntg1	ENSMUST00000144593.1	nonsense_mediated_decay	-
chr1_9288324_9290486	chr1	9288324	9290486	ENSMUSG00000025909.9	Sntg1	ENSMUST00000140295.1	protein_coding	-
chr1_9288324_9290486	chr1	9288324	9290486	ENSMUSG00000025909.9	Sntg1	ENSMUST00000132064.1	protein_coding	-
chr1_9288324_9290486	chr1	9288324	9290486	ENSMUSG00000025909.9	Sntg1	ENSMUST00000140302.1	nonsense_mediated_decay	-
chr1_9534979_9536896	chr1	9534979	9536896	ENSMUSG00000061024.7	Rrs1	ENSMUST00000072079.7	protein_coding	+
chr1_9537602_9539404	chr1	9537602	9539404	ENSMUSG00000025911.8	Adhfe1	ENSMUST00000144177.1	protein_coding	+
chr1_9537602_9539404	chr1	9537602	9539404	ENSMUSG00000025911.8	Adhfe1	ENSMUST00000027044.8	nonsense_mediated_decay	+
chr1_9537602_9539404	chr1	9537602	9539404	ENSMUSG00000025911.8	Adhfe1	ENSMUST00000130927.1	processed_transcript	+
chr1_9590899_9592800	chr1	9590899	9592800	ENSMUSG00000067879.3	3110035E14Rik	ENSMUST00000088666.3	protein_coding	+
chr1_9618859_9622011	chr1	9618859	9622011	ENSMUSG00000079671.2	2610203C22Rik	ENSMUST00000148310.1	processed_transcript	-
chr1_9618859_9622011	chr1	9618859	9622011	ENSMUSG00000079671.2	2610203C22Rik	ENSMUST00000153239.1	processed_transcript	-
chr1_9618859_9622011	chr1	9618859	9622011	ENSMUSG00000079671.2	2610203C22Rik	ENSMUST00000148585.1	processed_transcript	-
chr1_9618859_9622011	chr1	9618859	9622011	ENSMUSG00000079671.2	2610203C22Rik	ENSMUST00000145176.1	retained_intron	-
chr1_9618859_9622011	chr1	9618859	9622011	ENSMUSG00000079671.2	2610203C22Rik	ENSMUST00000115480.1	protein_coding	-
chr1_9689582_9691473	chr1	9689582	9691473	ENSMUSG00000025912.9	Mybl1	ENSMUST00000166970.1	protein_coding	-
chr1_9689582_9691473	chr1	9689582	9691473	ENSMUSG00000025912.9	Mybl1	ENSMUST00000115468.2	protein_coding	-
chr1_9689582_9691473	chr1	9689582	9691473	ENSMUSG00000025912.9	Mybl1	ENSMUST00000163098.1	protein_coding	-
chr1_9689582_9691473	chr1	9689582	9691473	ENSMUSG00000025912.9	Mybl1	ENSMUST00000088658.4	protein_coding	-
chr1_9737433_9739057	chr1	9737433	9739057	ENSMUSG00000085661.1	1700034P13Rik	ENSMUST00000135143.1	lincRNA	+
chr1_9737433_9739057	chr1	9737433	9739057	ENSMUSG00000085661.1	1700034P13Rik	ENSMUST00000148783.1	lincRNA	+
chr1_9737433_9739057	chr1	9737433	9739057	ENSMUSG00000045210.8	Vcpip1	ENSMUST00000057438.6	protein_coding	-
chr1_9787059_9789530	chr1	9787059	9789530	ENSMUSG00000025915.7	Sgk3	ENSMUST00000168907.1	protein_coding	+
chr1_9787059_9789530	chr1	9787059	9789530	ENSMUSG00000025915.7	Sgk3	ENSMUST00000166384.1	protein_coding	+
chr1_9787059_9789530	chr1	9787059	9789530	ENSMUSG00000025915.7	Sgk3	ENSMUST00000097825.4	protein_coding	+
chr1_9837449_9839318	chr1	9837449	9839318	ENSMUSG00000025915.7	Sgk3	ENSMUST00000171265.1	protein_coding	+
chr1_9837449_9839318	chr1	9837449	9839318	ENSMUSG00000025915.7	Sgk3	ENSMUST00000097826.4	protein_coding	+
chr1_9898165_9899463	chr1	9898165	9899463	ENSMUSG00000046101.9	6030422M02Rik	ENSMUST00000052843.5	protein_coding	+
chr1_9898165_9899463	chr1	9898165	9899463	ENSMUSG00000046101.9	6030422M02Rik	ENSMUST00000171802.1	protein_coding	+
chr1_9975225_9976290	chr1	9975225	9976290	ENSMUSG00000025916.3	Lrrc67	ENSMUST00000147000.1	processed_transcript	-
chr1_9998702_9999691	chr1	9998702	9999691	ENSMUSG00000025916.3	Lrrc67	ENSMUST00000155163.1	retained_intron	-
chr1_9998702_9999691	chr1	9998702	9999691	ENSMUSG00000025916.3	Lrrc67	ENSMUST00000130102.1	nonsense_mediated_decay	-
chr1_9998702_9999691	chr1	9998702	9999691	ENSMUSG00000025916.3	Lrrc67	ENSMUST00000027049.3	protein_coding	-
chr1_10027508_10028717	chr1	10027508	10028717	ENSMUSG00000056763.9	Cspp1	ENSMUST00000071087.5	protein_coding	+
chr1_10027508_10028717	chr1	10027508	10028717	ENSMUSG00000056763.9	Cspp1	ENSMUST00000143606.1	retained_intron	+
chr1_10027508_10028717	chr1	10027508	10028717	ENSMUSG00000056763.9	Cspp1	ENSMUST00000117415.1	protein_coding	+
chr1_10027508_10028717	chr1	10027508	10028717	ENSMUSG00000025917.3	Cops5	ENSMUST00000139578.1	retained_intron	-
chr1_10027508_10028717	chr1	10027508	10028717	ENSMUSG00000025917.3	Cops5	ENSMUST00000027050.3	protein_coding	-
chr1_10029415_10030516	chr1	10029415	10030516	ENSMUSG00000056763.9	Cspp1	ENSMUST00000118263.1	protein_coding	+
chr1_10029415_10030516	chr1	10029415	10030516	ENSMUSG00000056763.9	Cspp1	ENSMUST00000122156.1	protein_coding	+
chr1_10029415_10030516	chr1	10029415	10030516	ENSMUSG00000056763.9	Cspp1	ENSMUST00000119714.1	protein_coding	+
chr1_10029415_10030516	chr1	10029415	10030516	ENSMUSG00000056763.9	Cspp1	ENSMUST00000163561.1	protein_coding	+
chr1_10029415_10030516	chr1	10029415	10030516	ENSMUSG00000056763.9	Cspp1	ENSMUST00000134716.1	retained_intron	+
chr1_10029415_10030516	chr1	10029415	10030516	ENSMUSG00000056763.9	Cspp1	ENSMUST00000155974.1	protein_coding	+
chr1_10077479_10077736	chr1	10077479	10077736	ENSMUSG00000056763.9	Cspp1	ENSMUST00000123261.1	retained_intron	+
chr1_10105695_10105921	chr1	10105695	10105921	ENSMUSG00000056763.9	Cspp1	ENSMUST00000136283.1	retained_intron	+
chr1_10122955_10124266	chr1	10122955	10124266	ENSMUSG00000056763.9	Cspp1	ENSMUST00000148663.1	retained_intron	+
chr1_10221585_10224022	chr1	10221585	10224022	ENSMUSG00000067851.5	Arfgef1	ENSMUST00000131556.1	protein_coding	-
chr1_10221585_10224022	chr1	10221585	10224022	ENSMUSG00000067851.5	Arfgef1	ENSMUST00000088615.4	protein_coding	-
chr1_10467907_10468108	chr1	10467907	10468108	ENSMUSG00000042501.6	Cpa6	ENSMUST00000147575.1	retained_intron	-
chr1_10685153_10685361	chr1	10685153	10685361	ENSMUSG00000081417.1	Gm15603	ENSMUST00000119252.1	transcribed_processed_pseudogene	+
chr1_10709325_10711379	chr1	10709325	10711379	ENSMUSG00000042501.6	Cpa6	ENSMUST00000140938.1	processed_transcript	-
chr1_10709325_10711379	chr1	10709325	10711379	ENSMUSG00000042501.6	Cpa6	ENSMUST00000035577.6	protein_coding	-
chr1_10709325_10711379	chr1	10709325	10711379	ENSMUSG00000042501.6	Cpa6	ENSMUST00000153695.1	nonsense_mediated_decay	-
chr1_10982970_10984807	chr1	10982970	10984807	ENSMUSG00000048960.7	Prex2	ENSMUST00000027056.5	protein_coding	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000048613.7	protein_coding	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000137824.1	protein_coding	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000135014.1	protein_coding	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000142117.1	processed_transcript	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000141512.1	retained_intron	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000150870.1	nonsense_mediated_decay	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000171690.1	protein_coding	+
chr1_11403404_11405323	chr1	11403404	11405323	ENSMUSG00000057715.6	A830018L16Rik	ENSMUST00000115412.2	protein_coding	+
chr1_12707991_12709260	chr1	12707991	12709260	ENSMUSG00000016918.8	Sulf1	ENSMUST00000088585.3	protein_coding	+
chr1_12980268_12980843	chr1	12980268	12980843	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000146763.1	retained_intron	-
chr1_12980268_12980843	chr1	12980268	12980843	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000147606.1	retained_intron	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000171848.1	protein_coding	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000115401.2	protein_coding	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000146763.1	retained_intron	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000147606.1	retained_intron	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000136197.1	retained_intron	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000115402.1	protein_coding	-
chr1_12981072_12983141	chr1	12981072	12983141	ENSMUSG00000025938.9	Slco5a1	ENSMUST00000115403.2	protein_coding	-
chr1_13115464_13117946	chr1	13115464	13117946	ENSMUSG00000042414.7	Prdm14	ENSMUST00000047577.6	protein_coding	-
chr1_13141018_13141914	chr1	13141018	13141914	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000133232.1	processed_transcript	-
chr1_13289405_13290197	chr1	13289405	13290197	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000145280.1	protein_coding	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000124088.1	retained_intron	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000139970.1	retained_intron	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000143603.1	retained_intron	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000147927.1	retained_intron	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000006037.6	protein_coding	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000068304.6	protein_coding	-
chr1_13362008_13364955	chr1	13362008	13364955	ENSMUSG00000005886.8	Ncoa2	ENSMUST00000081713.4	protein_coding	-
chr1_13577898_13580486	chr1	13577898	13580486	ENSMUSG00000025935.4	Tram1	ENSMUST00000027068.4	protein_coding	-
chr1_13649547_13651088	chr1	13649547	13651088	ENSMUSG00000025937.5	Lactb2	ENSMUST00000027071.5	protein_coding	-
chr1_13658484_13660096	chr1	13658484	13660096	ENSMUSG00000067813.3	Xkr9	ENSMUST00000088542.3	protein_coding	+
chr1_14299186_14300524	chr1	14299186	14300524	ENSMUSG00000025932.7	Eya1	ENSMUST00000168081.1	protein_coding	-
chr1_14299186_14300524	chr1	14299186	14300524	ENSMUSG00000025932.7	Eya1	ENSMUST00000027066.6	protein_coding	-
chr1_14744956_14746208	chr1	14744956	14746208	ENSMUSG00000054493.1	Gm9947	ENSMUST00000067599.1	protein_coding	+
chr1_14744956_14746208	chr1	14744956	14746208	ENSMUSG00000025930.5	Msc	ENSMUST00000027062.5	protein_coding	-
chr1_14908183_14909143	chr1	14908183	14909143	ENSMUSG00000032769.4	Trpa1	ENSMUST00000041447.4	protein_coding	-
chr1_15699192_15699799	chr1	15699192	15699799	ENSMUSG00000092083.1	Kcnb2	ENSMUST00000168586.1	protein_coding	+
chr1_15795074_15796833	chr1	15795074	15796833	ENSMUSG00000025925.7	Terf1	ENSMUST00000027057.6	protein_coding	+
chr1_15795074_15796833	chr1	15795074	15796833	ENSMUSG00000025925.7	Terf1	ENSMUST00000093770.4	protein_coding	+
chr1_15882236_15883180	chr1	15882236	15883180	ENSMUSG00000032719.4	Gm106	ENSMUST00000040695.4	protein_coding	-
chr1_16082590_16083913	chr1	16082590	16083913	ENSMUSG00000067795.5	4930444P10Rik	ENSMUST00000145070.1	nonsense_mediated_decay	-
chr1_16082590_16083913	chr1	16082590	16083913	ENSMUSG00000067795.5	4930444P10Rik	ENSMUST00000151004.1	protein_coding	-
chr1_16093978_16096736	chr1	16093978	16096736	ENSMUSG00000025921.7	Rdh10	ENSMUST00000027053.7	protein_coding	+
chr1_16093978_16096736	chr1	16093978	16096736	ENSMUSG00000043716.7	Rpl7	ENSMUST00000125005.1	retained_intron	-
chr1_16093978_16096736	chr1	16093978	16096736	ENSMUSG00000043716.7	Rpl7	ENSMUST00000149566.1	protein_coding	-
chr1_16093978_16096736	chr1	16093978	16096736	ENSMUSG00000043716.7	Rpl7	ENSMUST00000141217.1	retained_intron	-
chr1_16093978_16096736	chr1	16093978	16096736	ENSMUSG00000043716.7	Rpl7	ENSMUST00000058437.7	protein_coding	-
chr1_16120029_16120520	chr1	16120029	16120520	ENSMUSG00000025921.7	Rdh10	ENSMUST00000152626.1	retained_intron	+
chr1_16243364_16243619	chr1	16243364	16243619	ENSMUSG00000089982.1	Gm7568	ENSMUST00000160446.1	antisense	+
chr1_16243364_16243619	chr1	16243364	16243619	ENSMUSG00000089982.1	Gm7568	ENSMUST00000161626.1	antisense	+
chr1_16243364_16243619	chr1	16243364	16243619	ENSMUSG00000089982.1	Gm7568	ENSMUST00000159190.1	antisense	+
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000144138.2	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000145092.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000115359.3	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000153966.2	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000151888.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000116646.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000149320.2	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000127420.1	nonsense_mediated_decay	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000162007.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000131257.2	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000128957.2	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000159558.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000162435.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000027052.6	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000162627.1	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000054668.6	protein_coding	-
chr1_16508533_16510767	chr1	16508533	16510767	ENSMUSG00000025920.12	Stau2	ENSMUST00000162751.1	protein_coding	-
chr1_16607808_16610280	chr1	16607808	16610280	ENSMUSG00000025939.10	Ube2w	ENSMUST00000132919.1	retained_intron	-
chr1_16607808_16610280	chr1	16607808	16610280	ENSMUSG00000025939.10	Ube2w	ENSMUST00000136455.1	retained_intron	-
chr1_16607808_16610280	chr1	16607808	16610280	ENSMUSG00000025939.10	Ube2w	ENSMUST00000133639.1	nonsense_mediated_decay	-
chr1_16607808_16610280	chr1	16607808	16610280	ENSMUSG00000025939.10	Ube2w	ENSMUST00000117146.1	protein_coding	-
chr1_16646403_16647950	chr1	16646403	16647950	ENSMUSG00000087414.1	Gm16720	ENSMUST00000130710.1	lincRNA	+
chr1_16646403_16647950	chr1	16646403	16647950	ENSMUSG00000079658.3	Tceb1	ENSMUST00000115352.3	protein_coding	-
chr1_16654884_16656239	chr1	16654884	16656239	ENSMUSG00000025940.5	Tmem70	ENSMUST00000065373.4	protein_coding	+
chr1_16677431_16679199	chr1	16677431	16679199	ENSMUSG00000025779.4	Ly96	ENSMUST00000026881.4	protein_coding	+
chr1_17086629_17089182	chr1	17086629	17089182	ENSMUSG00000042686.3	Jph1	ENSMUST00000038382.3	protein_coding	-
chr1_17135099_17136375	chr1	17135099	17136375	ENSMUSG00000025777.7	Gdap1	ENSMUST00000026879.7	protein_coding	+
chr1_17135099_17136375	chr1	17135099	17136375	ENSMUSG00000025777.7	Gdap1	ENSMUST00000150457.1	retained_intron	+
chr1_17591502_17592341	chr1	17591502	17592341	ENSMUSG00000067780.2	Pi15	ENSMUST00000088476.2	protein_coding	+
chr1_17717091_17718193	chr1	17717091	17718193	ENSMUSG00000025776.7	Crispld1	ENSMUST00000159958.1	protein_coding	+
chr1_17717091_17718193	chr1	17717091	17718193	ENSMUSG00000025776.7	Crispld1	ENSMUST00000160305.1	protein_coding	+
chr1_17717091_17718193	chr1	17717091	17718193	ENSMUSG00000025776.7	Crispld1	ENSMUST00000095075.4	protein_coding	+
chr1_17717091_17718193	chr1	17717091	17718193	ENSMUSG00000085125.1	Gm16070	ENSMUST00000149914.1	lincRNA	-
chr1_17717091_17718193	chr1	17717091	17718193	ENSMUSG00000085125.1	Gm16070	ENSMUST00000127328.1	lincRNA	-
chr1_17717091_17718193	chr1	17717091	17718193	ENSMUSG00000085125.1	Gm16070	ENSMUST00000155588.1	lincRNA	-
chr1_18213411_18214169	chr1	18213411	18214169	ENSMUSG00000070977.4	Defb44-ps	ENSMUST00000126871.1	transcribed_unprocessed_pseudogene	-
chr1_18959697_18960801	chr1	18959697	18960801	ENSMUSG00000088800.1	SNORA17	ENSMUST00000158175.1	snoRNA	-
chr1_19092848_19093192	chr1	19092848	19093192	ENSMUSG00000042596.7	Tcfap2d	ENSMUST00000037294.7	protein_coding	+
chr1_19198914_19199387	chr1	19198914	19199387	ENSMUSG00000025927.6	Tcfap2b	ENSMUST00000027059.4	protein_coding	+
chr1_19198914_19199387	chr1	19198914	19199387	ENSMUSG00000025927.6	Tcfap2b	ENSMUST00000166387.1	protein_coding	+
chr1_19201857_19202246	chr1	19201857	19202246	ENSMUSG00000025927.6	Tcfap2b	ENSMUST00000064976.4	protein_coding	+
chr1_20607597_20608726	chr1	20607597	20608726	ENSMUSG00000043760.9	Pkhd1	ENSMUST00000128051.1	processed_transcript	-
chr1_20607597_20608726	chr1	20607597	20608726	ENSMUSG00000043760.9	Pkhd1	ENSMUST00000147480.1	retained_intron	-
chr1_20607597_20608726	chr1	20607597	20608726	ENSMUSG00000043760.9	Pkhd1	ENSMUST00000088448.5	protein_coding	-
chr1_20607597_20608726	chr1	20607597	20608726	ENSMUSG00000043760.9	Pkhd1	ENSMUST00000060305.7	protein_coding	-
chr1_20809671_20810924	chr1	20809671	20810924	ENSMUSG00000041859.9	Mcm3	ENSMUST00000053266.9	protein_coding	-
chr1_20880145_20881910	chr1	20880145	20881910	ENSMUSG00000025931.8	Paqr8	ENSMUST00000163700.1	protein_coding	+
chr1_20880145_20881910	chr1	20880145	20881910	ENSMUSG00000025931.8	Paqr8	ENSMUST00000068880.6	protein_coding	+
chr1_20880145_20881910	chr1	20880145	20881910	ENSMUSG00000087078.1	6720483E21Rik	ENSMUST00000133805.1	lincRNA	-
chr1_20907586_20907789	chr1	20907586	20907789	ENSMUSG00000025931.8	Paqr8	ENSMUST00000172139.1	protein_coding	+
chr1_20907586_20907789	chr1	20907586	20907789	ENSMUSG00000025931.8	Paqr8	ENSMUST00000167119.1	protein_coding	+
chr1_20907844_20908101	chr1	20907844	20908101	ENSMUSG00000025931.8	Paqr8	ENSMUST00000172139.1	protein_coding	+
chr1_20907844_20908101	chr1	20907844	20908101	ENSMUSG00000025931.8	Paqr8	ENSMUST00000167119.1	protein_coding	+
chr1_20940962_20942600	chr1	20940962	20942600	ENSMUSG00000041809.4	Efhc1	ENSMUST00000160782.1	processed_transcript	+
chr1_20940962_20942600	chr1	20940962	20942600	ENSMUSG00000041809.4	Efhc1	ENSMUST00000038447.4	protein_coding	+
chr1_21068431_21070072	chr1	21068431	21070072	ENSMUSG00000041779.4	Tram2	ENSMUST00000037998.4	protein_coding	-
chr1_21208292_21209219	chr1	21208292	21209219	ENSMUSG00000025933.8	Tmem14a	ENSMUST00000027065.5	protein_coding	+
chr1_21208292_21209219	chr1	21208292	21209219	ENSMUSG00000025933.8	Tmem14a	ENSMUST00000027064.7	protein_coding	+
chr1_21208292_21209219	chr1	21208292	21209219	ENSMUSG00000025933.8	Tmem14a	ENSMUST00000165595.1	protein_coding	+
chr1_21229987_21231845	chr1	21229987	21231845	ENSMUSG00000025934.9	Gsta3	ENSMUST00000027067.8	protein_coding	+
chr1_21229987_21231845	chr1	21229987	21231845	ENSMUSG00000025934.9	Gsta3	ENSMUST00000121676.1	protein_coding	+
chr1_21229987_21231845	chr1	21229987	21231845	ENSMUSG00000025934.9	Gsta3	ENSMUST00000124990.1	processed_transcript	+
chr1_21261069_21262597	chr1	21261069	21262597	ENSMUSG00000046847.5	Gm7094	ENSMUST00000061136.5	pseudogene	+
chr1_21288081_21288569	chr1	21288081	21288569	ENSMUSG00000025936.8	Gm4956	ENSMUST00000082032.5	protein_coding	-
chr1_21339496_21339785	chr1	21339496	21339785	ENSMUSG00000067750.3	Khdc1a	ENSMUST00000088407.3	protein_coding	+
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000085163.1	Gm16705	ENSMUST00000129086.1	lincRNA	+
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000115299.1	retained_intron	-
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000173058.1	protein_coding	-
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000174183.1	nonsense_mediated_decay	-
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000173404.1	protein_coding	-
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000166949.1	protein_coding	-
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000115300.1	protein_coding	-
chr1_21950010_21952881	chr1	21950010	21952881	ENSMUSG00000028033.9	Kcnq5	ENSMUST00000029667.6	protein_coding	-
chr1_22305327_22306665	chr1	22305327	22306665	ENSMUSG00000041670.8	Rims1	ENSMUST00000164877.1	protein_coding	-
chr1_22603170_22603379	chr1	22603170	22603379	ENSMUSG00000041670.8	Rims1	ENSMUST00000097811.2	protein_coding	-
chr1_22603170_22603379	chr1	22603170	22603379	ENSMUSG00000041670.8	Rims1	ENSMUST00000097810.2	protein_coding	-
chr1_22603170_22603379	chr1	22603170	22603379	ENSMUSG00000041670.8	Rims1	ENSMUST00000097809.2	protein_coding	-
chr1_22603170_22603379	chr1	22603170	22603379	ENSMUSG00000041670.8	Rims1	ENSMUST00000115273.1	protein_coding	-
chr1_22603170_22603379	chr1	22603170	22603379	ENSMUSG00000041670.8	Rims1	ENSMUST00000081544.5	protein_coding	-
chr1_22603449_22604172	chr1	22603449	22604172	ENSMUSG00000041670.8	Rims1	ENSMUST00000097811.2	protein_coding	-
chr1_22603449_22604172	chr1	22603449	22604172	ENSMUSG00000041670.8	Rims1	ENSMUST00000097810.2	protein_coding	-
chr1_22603449_22604172	chr1	22603449	22604172	ENSMUSG00000041670.8	Rims1	ENSMUST00000097809.2	protein_coding	-
chr1_22603449_22604172	chr1	22603449	22604172	ENSMUSG00000041670.8	Rims1	ENSMUST00000115273.1	protein_coding	-
chr1_22603449_22604172	chr1	22603449	22604172	ENSMUSG00000041670.8	Rims1	ENSMUST00000081544.5	protein_coding	-
chr1_22810866_22813930	chr1	22810866	22813930	ENSMUSG00000041670.8	Rims1	ENSMUST00000097808.3	protein_coding	-
chr1_23108459_23109249	chr1	23108459	23109249	ENSMUSG00000073730.2	4933415F23Rik	ENSMUST00000073179.5	protein_coding	-
chr1_23262617_23264631	chr1	23262617	23264631	ENSMUSG00000073729.1	Gm6420	ENSMUST00000097807.1	protein_coding	-
chr1_23279004_23279224	chr1	23279004	23279224	ENSMUSG00000065405.1	Mir30a	ENSMUST00000083471.1	miRNA	+
chr1_23389259_23390868	chr1	23389259	23390868	ENSMUSG00000026158.5	Ogfrl1	ENSMUST00000027343.5	protein_coding	-
chr1_23767882_23770487	chr1	23767882	23770487	ENSMUSG00000026156.8	B3gat2	ENSMUST00000144602.1	protein_coding	+
chr1_23767882_23770487	chr1	23767882	23770487	ENSMUSG00000026156.8	B3gat2	ENSMUST00000063663.5	protein_coding	+
chr1_23767882_23770487	chr1	23767882	23770487	ENSMUSG00000026156.8	B3gat2	ENSMUST00000140583.1	protein_coding	+
chr1_23898913_23899279	chr1	23898913	23899279	ENSMUSG00000026155.7	Smap1	ENSMUST00000133398.1	retained_intron	-
chr1_23916393_23917248	chr1	23916393	23917248	ENSMUSG00000026155.7	Smap1	ENSMUST00000141330.1	processed_transcript	-
chr1_23916393_23917248	chr1	23916393	23917248	ENSMUSG00000026155.7	Smap1	ENSMUST00000129254.1	protein_coding	-
chr1_23916393_23917248	chr1	23916393	23917248	ENSMUSG00000026155.7	Smap1	ENSMUST00000149737.1	processed_transcript	-
chr1_23928215_23929783	chr1	23928215	23929783	ENSMUSG00000026155.7	Smap1	ENSMUST00000027339.7	protein_coding	-
chr1_24011629_24012864	chr1	24011629	24012864	ENSMUSG00000026154.3	1110058L19Rik	ENSMUST00000155767.1	retained_intron	-
chr1_24011629_24012864	chr1	24011629	24012864	ENSMUSG00000026154.3	1110058L19Rik	ENSMUST00000027338.3	protein_coding	-
chr1_24105847_24107729	chr1	24105847	24107729	ENSMUSG00000026153.8	Fam135a	ENSMUST00000027337.8	protein_coding	-
chr1_24105847_24107729	chr1	24105847	24107729	ENSMUSG00000026153.8	Fam135a	ENSMUST00000097806.3	protein_coding	-
chr1_24202124_24202525	chr1	24202124	24202525	ENSMUSG00000026147.9	Col9a1	ENSMUST00000088349.2	protein_coding	+
chr1_24202124_24202525	chr1	24202124	24202525	ENSMUSG00000026147.9	Col9a1	ENSMUST00000115252.2	protein_coding	+
chr1_24236071_24237099	chr1	24236071	24237099	ENSMUSG00000026147.9	Col9a1	ENSMUST00000147902.1	processed_transcript	+
chr1_24458877_24460183	chr1	24458877	24460183	ENSMUSG00000026141.7	Col19a1	ENSMUST00000144297.1	nonsense_mediated_decay	-
chr1_24592712_24594613	chr1	24592712	24594613	ENSMUSG00000026141.7	Col19a1	ENSMUST00000051344.5	protein_coding	-
chr1_24592712_24594613	chr1	24592712	24594613	ENSMUSG00000026141.7	Col19a1	ENSMUST00000115244.2	protein_coding	-
chr1_24684308_24686579	chr1	24684308	24686579	ENSMUSG00000073725.2	Lmbrd1	ENSMUST00000095062.3	protein_coding	+
chr1_25261372_25261930	chr1	25261372	25261930	ENSMUSG00000033569.10	Bai3	ENSMUST00000154102.1	processed_transcript	-
chr1_25280540_25280891	chr1	25280540	25280891	ENSMUSG00000080849.1	Gm15702	ENSMUST00000119680.1	transcribed_processed_pseudogene	+
chr1_25284745_25286573	chr1	25284745	25286573	ENSMUSG00000033569.10	Bai3	ENSMUST00000134022.1	retained_intron	-
chr1_25284745_25286573	chr1	25284745	25286573	ENSMUSG00000033569.10	Bai3	ENSMUST00000126096.1	retained_intron	-
chr1_25284745_25286573	chr1	25284745	25286573	ENSMUSG00000033569.10	Bai3	ENSMUST00000153568.1	retained_intron	-
chr1_25284745_25286573	chr1	25284745	25286573	ENSMUSG00000033569.10	Bai3	ENSMUST00000126626.1	protein_coding	-
chr1_25883713_25884688	chr1	25883713	25884688	ENSMUSG00000033569.10	Bai3	ENSMUST00000041838.5	protein_coding	-
chr1_25885283_25886332	chr1	25885283	25886332	ENSMUSG00000033569.10	Bai3	ENSMUST00000135518.1	protein_coding	-
chr1_25886681_25888342	chr1	25886681	25888342	ENSMUSG00000033569.10	Bai3	ENSMUST00000151309.1	protein_coding	-
chr1_25886681_25888342	chr1	25886681	25888342	ENSMUSG00000052558.1	Gm9884	ENSMUST00000064487.1	protein_coding	+
chr1_30776471_30776778	chr1	30776471	30776778	ENSMUSG00000053185.1	Gm9898	ENSMUST00000065469.1	protein_coding	-
chr1_30776837_30777508	chr1	30776837	30777508	ENSMUSG00000053185.1	Gm9898	ENSMUST00000065469.1	protein_coding	-
chr1_30929518_30931880	chr1	30929518	30931880	ENSMUSG00000048874.8	Phf3	ENSMUST00000046443.6	protein_coding	-
chr1_31005270_31007672	chr1	31005270	31007672	ENSMUSG00000026064.8	Ptp4a1	ENSMUST00000124445.1	processed_transcript	-
chr1_31005270_31007672	chr1	31005270	31007672	ENSMUSG00000026064.8	Ptp4a1	ENSMUST00000076587.3	protein_coding	-
chr1_31005270_31007672	chr1	31005270	31007672	ENSMUSG00000026064.8	Ptp4a1	ENSMUST00000027232.7	protein_coding	-
chr1_31278977_31279785	chr1	31278977	31279785	ENSMUSG00000026063.3	4930521A18Rik	ENSMUST00000027230.1	protein_coding	+
chr1_31278977_31279785	chr1	31278977	31279785	ENSMUSG00000086727.1	4931428L18Rik	ENSMUST00000135245.1	protein_coding	-
chr1_31278977_31279785	chr1	31278977	31279785	ENSMUSG00000086727.1	4931428L18Rik	ENSMUST00000127775.1	protein_coding	-
chr1_31316516_31317937	chr1	31316516	31317937	ENSMUSG00000077664.1	SNORA17	ENSMUST00000104476.1	snoRNA	-
chr1_32228994_32230145	chr1	32228994	32230145	ENSMUSG00000026058.5	Khdrbs2	ENSMUST00000027226.5	protein_coding	+
chr1_33726155_33727592	chr1	33726155	33727592	ENSMUSG00000044744.5	1700001G17Rik	ENSMUST00000051203.5	protein_coding	+
chr1_33726155_33727592	chr1	33726155	33727592	ENSMUSG00000026134.9	Prim2	ENSMUST00000027312.9	protein_coding	-
chr1_33776214_33777690	chr1	33776214	33777690	ENSMUSG00000004768.8	Rab23	ENSMUST00000088287.3	protein_coding	+
chr1_33776214_33777690	chr1	33776214	33777690	ENSMUSG00000004768.8	Rab23	ENSMUST00000140354.1	retained_intron	+
chr1_33776214_33777690	chr1	33776214	33777690	ENSMUSG00000004768.8	Rab23	ENSMUST00000138024.1	nonsense_mediated_decay	+
chr1_33776214_33777690	chr1	33776214	33777690	ENSMUSG00000004768.8	Rab23	ENSMUST00000135330.1	retained_intron	+
chr1_33776214_33777690	chr1	33776214	33777690	ENSMUSG00000004768.8	Rab23	ENSMUST00000151482.1	retained_intron	+
chr1_33776214_33777690	chr1	33776214	33777690	ENSMUSG00000004768.8	Rab23	ENSMUST00000115174.1	protein_coding	+
chr1_33790517_33791942	chr1	33790517	33791942	ENSMUSG00000004768.8	Rab23	ENSMUST00000150593.1	processed_transcript	+
chr1_33813019_33815933	chr1	33813019	33815933	ENSMUSG00000042215.7	Bag2	ENSMUST00000044691.7	protein_coding	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000125723.1	retained_intron	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000143591.1	processed_transcript	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000044455.5	protein_coding	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000130376.1	protein_coding	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000151055.1	protein_coding	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000115164.1	protein_coding	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000139143.1	nonsense_mediated_decay	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000019861.6	protein_coding	-
chr1_33869983_33871946	chr1	33869983	33871946	ENSMUSG00000042197.7	Zfp451	ENSMUST00000115167.1	protein_coding	-
chr1_33895321_33896044	chr1	33895321	33896044	ENSMUSG00000081402.2	Gm15455	ENSMUST00000117459.1	transcribed_processed_pseudogene	-
chr1_33895321_33896044	chr1	33895321	33896044	ENSMUSG00000081402.2	Gm15455	ENSMUST00000171875.1	transcribed_processed_pseudogene	-
chr1_33939726_33940962	chr1	33939726	33940962	ENSMUSG00000042182.9	Bend6	ENSMUST00000139700.1	processed_transcript	-
chr1_33939726_33940962	chr1	33939726	33940962	ENSMUSG00000042182.9	Bend6	ENSMUST00000126724.1	retained_intron	-
chr1_33963724_33965811	chr1	33963724	33965811	ENSMUSG00000026131.9	Dst	ENSMUST00000088270.5	protein_coding	+
chr1_33963724_33965811	chr1	33963724	33965811	ENSMUSG00000042182.9	Bend6	ENSMUST00000171943.1	protein_coding	-
chr1_33963724_33965811	chr1	33963724	33965811	ENSMUSG00000042182.9	Bend6	ENSMUST00000062289.8	protein_coding	-
chr1_33963724_33965811	chr1	33963724	33965811	ENSMUSG00000042182.9	Bend6	ENSMUST00000129464.1	processed_transcript	-
chr1_33963724_33965811	chr1	33963724	33965811	ENSMUSG00000042182.9	Bend6	ENSMUST00000115161.1	protein_coding	-
chr1_34067582_34069212	chr1	34067582	34069212	ENSMUSG00000026131.9	Dst	ENSMUST00000097785.2	protein_coding	+
chr1_34067582_34069212	chr1	34067582	34069212	ENSMUSG00000026131.9	Dst	ENSMUST00000097786.2	protein_coding	+
chr1_34067582_34069212	chr1	34067582	34069212	ENSMUSG00000026131.9	Dst	ENSMUST00000097789.3	protein_coding	+
chr1_34067582_34069212	chr1	34067582	34069212	ENSMUSG00000026131.9	Dst	ENSMUST00000115104.2	protein_coding	+
chr1_34067582_34069212	chr1	34067582	34069212	ENSMUSG00000026131.9	Dst	ENSMUST00000088216.4	protein_coding	+
chr1_34177339_34179384	chr1	34177339	34179384	ENSMUSG00000026131.9	Dst	ENSMUST00000115102.1	protein_coding	+
chr1_34234720_34235594	chr1	34234720	34235594	ENSMUSG00000085306.1	Gm16750	ENSMUST00000147568.1	lincRNA	-
chr1_34489579_34490488	chr1	34489579	34490488	ENSMUSG00000092852.1	AC106841.1	ENSMUST00000175111.1	miRNA	-
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000026127.7	Imp4	ENSMUST00000027303.7	protein_coding	+
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000026127.7	Imp4	ENSMUST00000149962.1	retained_intron	+
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000026127.7	Imp4	ENSMUST00000137794.1	nonsense_mediated_decay	+
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000026127.7	Imp4	ENSMUST00000134327.1	processed_transcript	+
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000026127.7	Imp4	ENSMUST00000128086.1	processed_transcript	+
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000026127.7	Imp4	ENSMUST00000136770.1	nonsense_mediated_decay	+
chr1_34495902_34497229	chr1	34495902	34497229	ENSMUSG00000042111.8	Ccdc115	ENSMUST00000042493.8	protein_coding	-
chr1_34515795_34517550	chr1	34515795	34517550	ENSMUSG00000026126.8	Ptpn18	ENSMUST00000027302.7	protein_coding	+
chr1_34515795_34517550	chr1	34515795	34517550	ENSMUSG00000026126.8	Ptpn18	ENSMUST00000164433.1	protein_coding	+
chr1_34555149_34555428	chr1	34555149	34555428	ENSMUSG00000026125.3	Prss39	ENSMUST00000027299.3	protein_coding	+
chr1_34617646_34617920	chr1	34617646	34617920	ENSMUSG00000037529.7	Prss40	ENSMUST00000047840.7	protein_coding	-
chr1_34617646_34617920	chr1	34617646	34617920	ENSMUSG00000037529.7	Prss40	ENSMUST00000115071.1	protein_coding	-
chr1_34635328_34637222	chr1	34635328	34637222	ENSMUSG00000045174.8	Fam123c	ENSMUST00000052670.8	protein_coding	+
chr1_34635328_34637222	chr1	34635328	34637222	ENSMUSG00000045815.3	1700101I19Rik	ENSMUST00000062557.3	protein_coding	-
chr1_34734063_34735851	chr1	34734063	34735851	ENSMUSG00000089955.1	C230030N03Rik	ENSMUST00000159326.1	processed_transcript	+
chr1_34805951_34807988	chr1	34805951	34807988	ENSMUSG00000037509.10	Arhgef4	ENSMUST00000159021.1	protein_coding	+
chr1_34858371_34860520	chr1	34858371	34860520	ENSMUSG00000037509.10	Arhgef4	ENSMUST00000047664.9	protein_coding	+
chr1_34858371_34860520	chr1	34858371	34860520	ENSMUSG00000037509.10	Arhgef4	ENSMUST00000162760.1	retained_intron	+
chr1_34858371_34860520	chr1	34858371	34860520	ENSMUSG00000037509.10	Arhgef4	ENSMUST00000159059.1	retained_intron	+
chr1_34858371_34860520	chr1	34858371	34860520	ENSMUSG00000037509.10	Arhgef4	ENSMUST00000160855.1	nonsense_mediated_decay	+
chr1_34898598_34900737	chr1	34898598	34900737	ENSMUSG00000037503.6	Fam168b	ENSMUST00000140534.1	retained_intron	-
chr1_34898598_34900737	chr1	34898598	34900737	ENSMUSG00000037503.6	Fam168b	ENSMUST00000047534.5	protein_coding	-
chr1_34898598_34900737	chr1	34898598	34900737	ENSMUSG00000037503.6	Fam168b	ENSMUST00000167518.1	protein_coding	-
chr1_34898598_34900737	chr1	34898598	34900737	ENSMUSG00000037503.6	Fam168b	ENSMUST00000170092.1	protein_coding	-
chr1_34906188_34907722	chr1	34906188	34907722	ENSMUSG00000026123.4	Plekhb2	ENSMUST00000115060.1	protein_coding	+
chr1_34906188_34907722	chr1	34906188	34907722	ENSMUSG00000026123.4	Plekhb2	ENSMUST00000156687.1	retained_intron	+
chr1_34906188_34907722	chr1	34906188	34907722	ENSMUSG00000026123.4	Plekhb2	ENSMUST00000027297.4	protein_coding	+
chr1_34907963_34909477	chr1	34907963	34909477	ENSMUSG00000026123.4	Plekhb2	ENSMUST00000152654.1	protein_coding	+
chr1_36124517_36126034	chr1	36124517	36126034	ENSMUSG00000045216.6	Hs6st1	ENSMUST00000088174.3	protein_coding	+
chr1_36230191_36230948	chr1	36230191	36230948	ENSMUSG00000037470.8	Uggt1	ENSMUST00000174224.1	nonsense_mediated_decay	-
chr1_36300270_36301652	chr1	36300270	36301652	ENSMUSG00000037470.8	Uggt1	ENSMUST00000174716.1	nonsense_mediated_decay	-
chr1_36300270_36301652	chr1	36300270	36301652	ENSMUSG00000037470.8	Uggt1	ENSMUST00000174266.1	nonsense_mediated_decay	-
chr1_36300270_36301652	chr1	36300270	36301652	ENSMUSG00000037470.8	Uggt1	ENSMUST00000046875.7	protein_coding	-
chr1_36329345_36330705	chr1	36329345	36330705	ENSMUSG00000047180.6	Neurl3	ENSMUST00000056946.6	protein_coding	-
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000126413.1	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000137906.1	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000115032.1	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000097778.2	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000115031.1	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000116629.2	nonsense_mediated_decay	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000124280.1	retained_intron	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000145179.1	processed_transcript	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000150747.1	processed_transcript	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000142319.1	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000115029.1	protein_coding	+
chr1_36364113_36365690	chr1	36364113	36365690	ENSMUSG00000037447.9	Arid5a	ENSMUST00000140218.1	retained_intron	+
chr1_36373615_36373941	chr1	36373615	36373941	ENSMUSG00000037447.9	Arid5a	ENSMUST00000141121.1	retained_intron	+
chr1_36424709_36426475	chr1	36424709	36426475	ENSMUSG00000010453.5	4632411B12Rik	ENSMUST00000115018.2	protein_coding	-
chr1_36424709_36426475	chr1	36424709	36426475	ENSMUSG00000010453.5	4632411B12Rik	ENSMUST00000010597.3	protein_coding	-
chr1_36497839_36498517	chr1	36497839	36498517	ENSMUSG00000001143.7	Lman2l	ENSMUST00000134594.1	retained_intron	-
chr1_36501163_36502727	chr1	36501163	36502727	ENSMUSG00000001143.7	Lman2l	ENSMUST00000123583.1	nonsense_mediated_decay	-
chr1_36501163_36502727	chr1	36501163	36502727	ENSMUSG00000001143.7	Lman2l	ENSMUST00000115011.1	protein_coding	-
chr1_36501163_36502727	chr1	36501163	36502727	ENSMUSG00000001143.7	Lman2l	ENSMUST00000001171.6	nonsense_mediated_decay	-
chr1_36501163_36502727	chr1	36501163	36502727	ENSMUSG00000001143.7	Lman2l	ENSMUST00000125304.1	protein_coding	-
chr1_36527650_36529410	chr1	36527650	36529410	ENSMUSG00000037408.8	Cnnm4	ENSMUST00000045383.7	protein_coding	+
chr1_36527650_36529410	chr1	36527650	36529410	ENSMUSG00000037408.8	Cnnm4	ENSMUST00000153128.1	protein_coding	+
chr1_36568152_36569949	chr1	36568152	36569949	ENSMUSG00000001138.7	Cnnm3	ENSMUST00000001166.7	protein_coding	+
chr1_36568152_36569949	chr1	36568152	36569949	ENSMUSG00000001138.7	Cnnm3	ENSMUST00000097776.3	protein_coding	+
chr1_36568152_36569949	chr1	36568152	36569949	ENSMUSG00000001138.7	Cnnm3	ENSMUST00000154225.1	retained_intron	+
chr1_36592267_36593615	chr1	36592267	36593615	ENSMUSG00000067653.5	Ankrd23	ENSMUST00000167983.1	protein_coding	-
chr1_36592267_36593615	chr1	36592267	36593615	ENSMUSG00000067653.5	Ankrd23	ENSMUST00000054665.4	protein_coding	-
chr1_36592267_36593615	chr1	36592267	36593615	ENSMUSG00000067653.5	Ankrd23	ENSMUST00000045120.6	protein_coding	-
chr1_36603245_36604774	chr1	36603245	36604774	ENSMUSG00000079610.3	Ankrd39	ENSMUST00000001172.5	protein_coding	-
chr1_36609309_36609923	chr1	36609309	36609923	ENSMUSG00000026121.7	Sema4c	ENSMUST00000123055.1	retained_intron	-
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000087589.2	D430040D24Rik	ENSMUST00000149224.2	processed_transcript	+
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000026121.7	Sema4c	ENSMUST00000154493.1	protein_coding	-
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000026121.7	Sema4c	ENSMUST00000128104.1	protein_coding	-
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000026121.7	Sema4c	ENSMUST00000114991.1	protein_coding	-
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000026121.7	Sema4c	ENSMUST00000027295.4	protein_coding	-
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000026121.7	Sema4c	ENSMUST00000114992.1	protein_coding	-
chr1_36613328_36615404	chr1	36613328	36615404	ENSMUSG00000026121.7	Sema4c	ENSMUST00000114990.1	protein_coding	-
chr1_36645814_36646882	chr1	36645814	36646882	ENSMUSG00000046337.10	Fam178b	ENSMUST00000114986.2	processed_transcript	-
chr1_36739503_36741665	chr1	36739503	36741665	ENSMUSG00000046337.10	Fam178b	ENSMUST00000057826.8	protein_coding	-
chr1_36739503_36741665	chr1	36739503	36741665	ENSMUSG00000046337.10	Fam178b	ENSMUST00000114981.1	protein_coding	-
chr1_36739503_36741665	chr1	36739503	36741665	ENSMUSG00000046337.10	Fam178b	ENSMUST00000170295.1	protein_coding	-
chr1_36747768_36749237	chr1	36747768	36749237	ENSMUSG00000061518.4	Cox5b	ENSMUST00000081180.4	protein_coding	+
chr1_36747768_36749237	chr1	36747768	36749237	ENSMUSG00000061518.4	Cox5b	ENSMUST00000168827.1	protein_coding	+
chr1_36763981_36764525	chr1	36763981	36764525	ENSMUSG00000037351.3	Actr1b	ENSMUST00000160043.1	retained_intron	-
chr1_36765496_36767334	chr1	36765496	36767334	ENSMUSG00000037351.3	Actr1b	ENSMUST00000162662.1	processed_transcript	-
chr1_36765496_36767334	chr1	36765496	36767334	ENSMUSG00000037351.3	Actr1b	ENSMUST00000159448.1	protein_coding	-
chr1_36765496_36767334	chr1	36765496	36767334	ENSMUSG00000037351.3	Actr1b	ENSMUST00000043951.3	protein_coding	-
chr1_36771080_36771424	chr1	36771080	36771424	ENSMUSG00000037351.3	Actr1b	ENSMUST00000160084.1	protein_coding	-
chr1_36818114_36819376	chr1	36818114	36819376	ENSMUSG00000026117.7	Zap70	ENSMUST00000027291.3	protein_coding	+
chr1_36995201_36997558	chr1	36995201	36997558	ENSMUSG00000026116.5	Tmem131	ENSMUST00000027290.5	protein_coding	-
chr1_37082161_37084003	chr1	37082161	37084003	ENSMUSG00000050122.12	Vwa3b	ENSMUST00000117172.2	protein_coding	+
chr1_37085278_37086982	chr1	37085278	37086982	ENSMUSG00000050122.12	Vwa3b	ENSMUST00000124404.2	retained_intron	+
chr1_37085278_37086982	chr1	37085278	37086982	ENSMUSG00000050122.12	Vwa3b	ENSMUST00000067178.7	protein_coding	+
chr1_37085278_37086982	chr1	37085278	37086982	ENSMUSG00000050122.12	Vwa3b	ENSMUST00000162449.1	protein_coding	+
chr1_37210563_37210977	chr1	37210563	37210977	ENSMUSG00000026115.8	Vwa3b	ENSMUST00000027289.7	protein_coding	+
chr1_37210563_37210977	chr1	37210563	37210977	ENSMUSG00000026115.8	Vwa3b	ENSMUST00000169057.1	protein_coding	+
chr1_37275274_37275732	chr1	37275274	37275732	ENSMUSG00000026114.8	Cnga3	ENSMUST00000134238.1	protein_coding	+
chr1_37356311_37358329	chr1	37356311	37358329	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000146676.1	processed_transcript	+
chr1_37356311_37358329	chr1	37356311	37358329	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000136846.1	protein_coding	+
chr1_37356311_37358329	chr1	37356311	37358329	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000027287.4	protein_coding	+
chr1_37356311_37358329	chr1	37356311	37358329	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000132401.1	protein_coding	+
chr1_37356311_37358329	chr1	37356311	37358329	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000168546.1	protein_coding	+
chr1_37356311_37358329	chr1	37356311	37358329	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000140264.1	protein_coding	+
chr1_37390552_37391348	chr1	37390552	37391348	ENSMUSG00000086064.1	4930439A04Rik	ENSMUST00000141402.1	antisense	-
chr1_37390552_37391348	chr1	37390552	37391348	ENSMUSG00000086064.1	4930439A04Rik	ENSMUST00000137241.1	antisense	-
chr1_37414316_37415093	chr1	37414316	37415093	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000132615.1	protein_coding	+
chr1_37414316_37415093	chr1	37414316	37415093	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000137266.1	protein_coding	+
chr1_37424096_37426315	chr1	37424096	37426315	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000058307.8	protein_coding	+
chr1_37424096_37426315	chr1	37424096	37426315	ENSMUSG00000026113.10	Inpp4a	ENSMUST00000114933.2	protein_coding	+
chr1_37485832_37487609	chr1	37485832	37487609	ENSMUSG00000026111.9	Unc50	ENSMUST00000027285.6	protein_coding	+
chr1_37485832_37487609	chr1	37485832	37487609	ENSMUSG00000026111.9	Unc50	ENSMUST00000144617.1	protein_coding	+
chr1_37485832_37487609	chr1	37485832	37487609	ENSMUSG00000026111.9	Unc50	ENSMUST00000114925.3	protein_coding	+
chr1_37485832_37487609	chr1	37485832	37487609	ENSMUSG00000026111.9	Unc50	ENSMUST00000118059.1	protein_coding	+
chr1_37485832_37487609	chr1	37485832	37487609	ENSMUSG00000026112.6	6330578E17Rik	ENSMUST00000027286.6	protein_coding	-
chr1_37552649_37554132	chr1	37552649	37554132	ENSMUSG00000026110.9	Mgat4a	ENSMUST00000148047.1	protein_coding	-
chr1_37552649_37554132	chr1	37552649	37554132	ENSMUSG00000026110.9	Mgat4a	ENSMUST00000149791.1	nonsense_mediated_decay	-
chr1_37552649_37554132	chr1	37552649	37554132	ENSMUSG00000026110.9	Mgat4a	ENSMUST00000143636.1	protein_coding	-
chr1_37596797_37598552	chr1	37596797	37598552	ENSMUSG00000026110.9	Mgat4a	ENSMUST00000151952.1	protein_coding	-
chr1_37670362_37672455	chr1	37670362	37672455	ENSMUSG00000089767.1	4930556I23Rik	ENSMUST00000160659.1	antisense	+
chr1_37775142_37777514	chr1	37775142	37777514	ENSMUSG00000026090.9	2010300C02Rik	ENSMUST00000160589.1	protein_coding	-
chr1_37775142_37777514	chr1	37775142	37777514	ENSMUSG00000026090.9	2010300C02Rik	ENSMUST00000162875.1	protein_coding	-
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000092106.1	Gm17715	ENSMUST00000163219.1	lincRNA	+
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000060771.7	Tsga10	ENSMUST00000114901.2	protein_coding	-
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000060771.7	Tsga10	ENSMUST00000155852.1	retained_intron	-
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000060771.7	Tsga10	ENSMUST00000123082.1	retained_intron	-
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000060771.7	Tsga10	ENSMUST00000088072.3	protein_coding	-
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000060771.7	Tsga10	ENSMUST00000114903.1	protein_coding	-
chr1_37921227_37923113	chr1	37921227	37923113	ENSMUSG00000060771.7	Tsga10	ENSMUST00000041815.8	protein_coding	-
chr1_37928400_37929884	chr1	37928400	37929884	ENSMUSG00000037216.4	Lipt1	ENSMUST00000128085.1	protein_coding	+
chr1_37928400_37929884	chr1	37928400	37929884	ENSMUSG00000037216.4	Lipt1	ENSMUST00000041621.3	protein_coding	+
chr1_37928400_37929884	chr1	37928400	37929884	ENSMUSG00000037216.4	Lipt1	ENSMUST00000142670.1	protein_coding	+
chr1_37928400_37929884	chr1	37928400	37929884	ENSMUSG00000037216.4	Lipt1	ENSMUST00000144440.1	protein_coding	+
chr1_37938547_37939086	chr1	37938547	37939086	ENSMUSG00000026088.9	Mitd1	ENSMUST00000127170.1	processed_transcript	-
chr1_37946261_37947884	chr1	37946261	37947884	ENSMUSG00000026087.5	Mrpl30	ENSMUST00000027256.5	protein_coding	+
chr1_37946261_37947884	chr1	37946261	37947884	ENSMUSG00000026087.5	Mrpl30	ENSMUST00000161694.1	retained_intron	+
chr1_37946261_37947884	chr1	37946261	37947884	ENSMUSG00000026088.9	Mitd1	ENSMUST00000138806.1	retained_intron	-
chr1_37946261_37947884	chr1	37946261	37947884	ENSMUSG00000026088.9	Mitd1	ENSMUST00000027257.8	protein_coding	-
chr1_37946261_37947884	chr1	37946261	37947884	ENSMUSG00000026088.9	Mitd1	ENSMUST00000139725.1	protein_coding	-
chr1_37948141_37948542	chr1	37948141	37948542	ENSMUSG00000026087.5	Mrpl30	ENSMUST00000160082.1	processed_transcript	+
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000026083.7	Eif5b	ENSMUST00000027252.7	protein_coding	+
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000058407.6	Txndc9	ENSMUST00000162058.1	retained_intron	-
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000058407.6	Txndc9	ENSMUST00000162472.1	processed_transcript	-
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000058407.6	Txndc9	ENSMUST00000161323.1	retained_intron	-
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000058407.6	Txndc9	ENSMUST00000160254.1	protein_coding	-
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000058407.6	Txndc9	ENSMUST00000072243.6	protein_coding	-
chr1_38053515_38055741	chr1	38053515	38055741	ENSMUSG00000058407.6	Txndc9	ENSMUST00000162031.1	protein_coding	-
chr1_38185457_38187513	chr1	38185457	38187513	ENSMUSG00000026082.6	Rev1	ENSMUST00000027251.6	protein_coding	-
chr1_38254100_38254486	chr1	38254100	38254486	ENSMUSG00000037138.9	Aff3	ENSMUST00000136641.1	protein_coding	-
chr1_38364411_38365972	chr1	38364411	38365972	ENSMUSG00000085280.1	Gm16151	ENSMUST00000129696.1	antisense	+
chr1_38441130_38441963	chr1	38441130	38441963	ENSMUSG00000087131.1	Gm16152	ENSMUST00000143261.1	antisense	+
chr1_38445295_38445889	chr1	38445295	38445889	ENSMUSG00000087131.1	Gm16152	ENSMUST00000131663.1	antisense	+
chr1_38596699_38596929	chr1	38596699	38596929	ENSMUSG00000037138.9	Aff3	ENSMUST00000169636.1	protein_coding	-
chr1_38683074_38685774	chr1	38683074	38685774	ENSMUSG00000037138.9	Aff3	ENSMUST00000142875.1	nonsense_mediated_decay	-
chr1_38683074_38685774	chr1	38683074	38685774	ENSMUSG00000037138.9	Aff3	ENSMUST00000095027.2	protein_coding	-
chr1_38721147_38722831	chr1	38721147	38722831	ENSMUSG00000037138.9	Aff3	ENSMUST00000134963.1	nonsense_mediated_decay	-
chr1_38721147_38722831	chr1	38721147	38722831	ENSMUSG00000037138.9	Aff3	ENSMUST00000027250.7	protein_coding	-
chr1_38721147_38722831	chr1	38721147	38722831	ENSMUSG00000037138.9	Aff3	ENSMUST00000039827.7	protein_coding	-
chr1_38892332_38893943	chr1	38892332	38893943	ENSMUSG00000048814.4	Lonrf2	ENSMUST00000147695.1	protein_coding	-
chr1_38953954_38955391	chr1	38953954	38955391	ENSMUSG00000026080.7	Chst10	ENSMUST00000064410.4	protein_coding	-
chr1_38953954_38955391	chr1	38953954	38955391	ENSMUSG00000026080.7	Chst10	ENSMUST00000027249.6	protein_coding	-
chr1_39043756_39045358	chr1	39043756	39045358	ENSMUSG00000026078.5	Pdcl3	ENSMUST00000027247.5	protein_coding	+
chr1_39249013_39252415	chr1	39249013	39252415	ENSMUSG00000026077.9	Npas2	ENSMUST00000173050.1	protein_coding	+
chr1_39249013_39252415	chr1	39249013	39252415	ENSMUSG00000026077.9	Npas2	ENSMUST00000056815.7	protein_coding	+
chr1_39398300_39399214	chr1	39398300	39399214	ENSMUSG00000026077.9	Npas2	ENSMUST00000172825.1	processed_transcript	+
chr1_39423663_39425924	chr1	39423663	39425924	ENSMUSG00000073702.4	Rpl31	ENSMUST00000086535.6	protein_coding	+
chr1_39534393_39536064	chr1	39534393	39536064	ENSMUSG00000003134.5	Tbc1d8	ENSMUST00000054462.5	protein_coding	-
chr1_39592007_39593237	chr1	39592007	39593237	ENSMUSG00000003135.9	D1Bwg0212e	ENSMUST00000161515.1	protein_coding	+
chr1_39592007_39593237	chr1	39592007	39593237	ENSMUSG00000003135.9	D1Bwg0212e	ENSMUST00000003219.8	protein_coding	+
chr1_39605519_39605829	chr1	39605519	39605829	ENSMUSG00000077704.1	Snord89	ENSMUST00000104516.1	snoRNA	-
chr1_39630816_39631135	chr1	39630816	39631135	ENSMUSG00000064936.1	SNORA33	ENSMUST00000083002.1	snoRNA	-
chr1_39632824_39635747	chr1	39632824	39635747	ENSMUSG00000048234.8	Rnf149	ENSMUST00000062525.5	protein_coding	-
chr1_39706196_39708302	chr1	39706196	39708302	ENSMUSG00000090677.1	D930019O06Rik	ENSMUST00000163958.1	lincRNA	+
chr1_39706196_39708302	chr1	39706196	39708302	ENSMUSG00000050967.4	Creg2	ENSMUST00000053355.4	protein_coding	-
chr1_39777431_39778728	chr1	39777431	39778728	ENSMUSG00000057173.7	Rfx8	ENSMUST00000151913.1	protein_coding	-
chr1_39860994_39861574	chr1	39860994	39861574	ENSMUSG00000091937.1	Gm3646	ENSMUST00000171319.1	protein_coding	-
chr1_39956795_39960282	chr1	39956795	39960282	ENSMUSG00000026074.7	Map4k4	ENSMUST00000163854.1	protein_coding	+
chr1_39956795_39960282	chr1	39956795	39960282	ENSMUSG00000026074.7	Map4k4	ENSMUST00000168431.1	protein_coding	+
chr1_39956795_39960282	chr1	39956795	39960282	ENSMUSG00000026074.7	Map4k4	ENSMUST00000168512.1	protein_coding	+
chr1_39956795_39960282	chr1	39956795	39960282	ENSMUSG00000026074.7	Map4k4	ENSMUST00000027244.6	protein_coding	+
chr1_40018960_40020509	chr1	40018960	40020509	ENSMUSG00000026074.7	Map4k4	ENSMUST00000088000.4	protein_coding	+
chr1_40141239_40143285	chr1	40141239	40143285	ENSMUSG00000026073.7	Il1r2	ENSMUST00000027243.7	protein_coding	+
chr1_40141239_40143285	chr1	40141239	40143285	ENSMUSG00000026073.7	Il1r2	ENSMUST00000171612.1	protein_coding	+
chr1_40141239_40143285	chr1	40141239	40143285	ENSMUSG00000086705.1	Gm16894	ENSMUST00000122879.1	lincRNA	-
chr1_40281411_40282374	chr1	40281411	40282374	ENSMUSG00000026072.6	Il1r1	ENSMUST00000027241.4	protein_coding	+
chr1_40322781_40324318	chr1	40322781	40324318	ENSMUSG00000026072.6	Il1r1	ENSMUST00000114795.1	protein_coding	+
chr1_40381156_40383280	chr1	40381156	40383280	ENSMUSG00000070942.3	Il1rl2	ENSMUST00000095020.3	protein_coding	+
chr1_40485869_40486465	chr1	40485869	40486465	ENSMUSG00000026069.9	Il1rl1	ENSMUST00000174335.1	protein_coding	+
chr1_40522258_40523076	chr1	40522258	40523076	ENSMUSG00000026070.8	Il18r1	ENSMUST00000167723.1	protein_coding	+
chr1_40522258_40523076	chr1	40522258	40523076	ENSMUSG00000026070.8	Il18r1	ENSMUST00000097771.3	protein_coding	+
chr1_40522258_40523076	chr1	40522258	40523076	ENSMUSG00000026070.8	Il18r1	ENSMUST00000108044.2	protein_coding	+
chr1_40522258_40523076	chr1	40522258	40523076	ENSMUSG00000026070.8	Il18r1	ENSMUST00000087983.2	protein_coding	+
chr1_40571717_40572704	chr1	40571717	40572704	ENSMUSG00000026068.5	Il18rap	ENSMUST00000027237.5	protein_coding	+
chr1_40571717_40572704	chr1	40571717	40572704	ENSMUSG00000026068.5	Il18rap	ENSMUST00000163057.1	retained_intron	+
chr1_40571717_40572704	chr1	40571717	40572704	ENSMUSG00000026068.5	Il18rap	ENSMUST00000159724.1	retained_intron	+
chr1_40636450_40637567	chr1	40636450	40637567	ENSMUSG00000026065.7	Slc9a4	ENSMUST00000027233.7	protein_coding	+
chr1_40736933_40739705	chr1	40736933	40739705	ENSMUSG00000026062.7	Slc9a2	ENSMUST00000027231.7	protein_coding	+
chr1_40846472_40848076	chr1	40846472	40848076	ENSMUSG00000041945.6	Mfsd9	ENSMUST00000144385.1	retained_intron	-
chr1_40846472_40848076	chr1	40846472	40848076	ENSMUSG00000041945.6	Mfsd9	ENSMUST00000131390.1	nonsense_mediated_decay	-
chr1_40846472_40848076	chr1	40846472	40848076	ENSMUSG00000041945.6	Mfsd9	ENSMUST00000039672.5	protein_coding	-
chr1_40862009_40863175	chr1	40862009	40863175	ENSMUSG00000079588.1	Tmem182	ENSMUST00000114765.1	protein_coding	+
chr1_42286341_42287982	chr1	42286341	42287982	ENSMUSG00000053640.1	Gm9915	ENSMUST00000066196.1	protein_coding	+
chr1_42907523_42909070	chr1	42907523	42909070	ENSMUSG00000060679.7	Mrps9	ENSMUST00000057208.9	protein_coding	+
chr1_42907523_42909070	chr1	42907523	42909070	ENSMUSG00000060679.7	Mrps9	ENSMUST00000164185.1	protein_coding	+
chr1_43009150_43010723	chr1	43009150	43010723	ENSMUSG00000079587.1	Gpr45	ENSMUST00000055874.6	protein_coding	+
chr1_43148081_43150141	chr1	43148081	43150141	ENSMUSG00000041878.3	8430432A02Rik	ENSMUST00000039080.3	protein_coding	+
chr1_43148081_43150141	chr1	43148081	43150141	ENSMUSG00000070939.2	Tgfbrap1	ENSMUST00000114756.1	protein_coding	-
chr1_43154804_43156172	chr1	43154804	43156172	ENSMUSG00000010290.7	AI597479	ENSMUST00000010434.7	protein_coding	+
chr1_43154804_43156172	chr1	43154804	43156172	ENSMUSG00000070939.2	Tgfbrap1	ENSMUST00000095014.1	protein_coding	-
chr1_43219911_43221864	chr1	43219911	43221864	ENSMUSG00000008136.8	Fhl2	ENSMUST00000008280.7	protein_coding	-
chr1_43501841_43504284	chr1	43501841	43504284	ENSMUSG00000066877.5	Nck2	ENSMUST00000086421.5	protein_coding	+
chr1_43501841_43504284	chr1	43501841	43504284	ENSMUSG00000066877.5	Nck2	ENSMUST00000114744.1	protein_coding	+
chr1_43501841_43504284	chr1	43501841	43504284	ENSMUSG00000066877.5	Nck2	ENSMUST00000136648.1	processed_transcript	+
chr1_43513612_43514539	chr1	43513612	43514539	ENSMUSG00000066877.5	Nck2	ENSMUST00000124817.1	processed_transcript	+
chr1_43786907_43787916	chr1	43786907	43787916	ENSMUSG00000026051.8	1500015O10Rik	ENSMUST00000027217.8	protein_coding	+
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000128261.1	protein_coding	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000136704.1	nonsense_mediated_decay	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000134860.1	processed_transcript	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000153317.1	processed_transcript	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000136179.1	processed_transcript	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000139451.1	protein_coding	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000076997.6	nonsense_mediated_decay	-
chr1_43883686_43885484	chr1	43883686	43885484	ENSMUSG00000057363.6	Uxs1	ENSMUST00000126008.1	protein_coding	-
chr1_43959375_43960357	chr1	43959375	43960357	ENSMUSG00000088848.1	SNORA17	ENSMUST00000158223.1	snoRNA	+
chr1_43989936_43991588	chr1	43989936	43991588	ENSMUSG00000041763.7	Tpp2	ENSMUST00000087933.3	protein_coding	+
chr1_43989936_43991588	chr1	43989936	43991588	ENSMUSG00000041763.7	Tpp2	ENSMUST00000097767.1	protein_coding	+
chr1_44118103_44118739	chr1	44118103	44118739	ENSMUSG00000091844.1	Gm8251	ENSMUST00000168641.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000149502.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000143327.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000127923.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000147661.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000129702.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000152239.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000150911.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000133677.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000128190.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000147571.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000156392.1	protein_coding	-
chr1_44158331_44159733	chr1	44158331	44159733	ENSMUSG00000026049.5	1700029F09Rik	ENSMUST00000027215.5	protein_coding	-
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000041684.5	Bivm	ENSMUST00000155917.1	processed_transcript	+
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000041684.5	Bivm	ENSMUST00000138521.1	processed_transcript	+
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000041684.5	Bivm	ENSMUST00000035991.1	protein_coding	+
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000041684.5	Bivm	ENSMUST00000114709.2	protein_coding	+
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000041684.5	Bivm	ENSMUST00000129068.1	processed_transcript	+
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000026047.7	Kdelc1	ENSMUST00000152643.1	nonsense_mediated_decay	-
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000026047.7	Kdelc1	ENSMUST00000149665.1	retained_intron	-
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000026047.7	Kdelc1	ENSMUST00000027213.7	protein_coding	-
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000026047.7	Kdelc1	ENSMUST00000141125.1	retained_intron	-
chr1_44175103_44177458	chr1	44175103	44177458	ENSMUSG00000026047.7	Kdelc1	ENSMUST00000065767.2	protein_coding	-
chr1_44204019_44205463	chr1	44204019	44205463	ENSMUSG00000026048.9	Ercc5	ENSMUST00000166196.1	protein_coding	+
chr1_44204019_44205463	chr1	44204019	44205463	ENSMUSG00000026048.9	Ercc5	ENSMUST00000027214.3	protein_coding	+
chr1_44204019_44205463	chr1	44204019	44205463	ENSMUSG00000026048.9	Ercc5	ENSMUST00000131177.1	retained_intron	+
chr1_44204019_44205463	chr1	44204019	44205463	ENSMUSG00000026048.9	Ercc5	ENSMUST00000139510.1	processed_transcript	+
chr1_44204019_44205463	chr1	44204019	44205463	ENSMUSG00000026048.9	Ercc5	ENSMUST00000145406.1	processed_transcript	+
chr1_44275700_44276515	chr1	44275700	44276515	ENSMUSG00000046828.3	4832428D23Rik	ENSMUST00000150062.1	retained_intron	-
chr1_44275700_44276515	chr1	44275700	44276515	ENSMUSG00000046828.3	4832428D23Rik	ENSMUST00000054801.3	protein_coding	-
chr1_44608158_44609833	chr1	44608158	44609833	ENSMUSG00000056870.3	Gulp1	ENSMUST00000074525.3	protein_coding	+
chr1_44608158_44609833	chr1	44608158	44609833	ENSMUSG00000056870.3	Gulp1	ENSMUST00000160854.1	protein_coding	+
chr1_44608158_44609833	chr1	44608158	44609833	ENSMUSG00000056870.3	Gulp1	ENSMUST00000159555.1	nonsense_mediated_decay	+
chr1_44608158_44609833	chr1	44608158	44609833	ENSMUSG00000056870.3	Gulp1	ENSMUST00000161793.1	processed_transcript	+
chr1_44608158_44609833	chr1	44608158	44609833	ENSMUSG00000056870.3	Gulp1	ENSMUST00000161066.1	protein_coding	+
chr1_45368229_45368633	chr1	45368229	45368633	ENSMUSG00000026043.11	Col3a1	ENSMUST00000087883.6	protein_coding	+
chr1_45368229_45368633	chr1	45368229	45368633	ENSMUSG00000026043.11	Col3a1	ENSMUST00000129611.1	retained_intron	+
chr1_45558107_45560359	chr1	45558107	45560359	ENSMUSG00000026042.9	Col5a2	ENSMUST00000134681.1	retained_intron	-
chr1_45558107_45560359	chr1	45558107	45560359	ENSMUSG00000026042.9	Col5a2	ENSMUST00000114615.2	protein_coding	-
chr1_45558107_45560359	chr1	45558107	45560359	ENSMUSG00000026042.9	Col5a2	ENSMUST00000086430.4	protein_coding	-
chr1_45851619_45853296	chr1	45851619	45853296	ENSMUSG00000025995.9	Wdr75	ENSMUST00000027139.8	protein_coding	+
chr1_45851619_45853296	chr1	45851619	45853296	ENSMUSG00000025995.9	Wdr75	ENSMUST00000154436.1	retained_intron	+
chr1_45851619_45853296	chr1	45851619	45853296	ENSMUSG00000025995.9	Wdr75	ENSMUST00000169703.1	protein_coding	+
chr1_45851619_45853296	chr1	45851619	45853296	ENSMUSG00000025995.9	Wdr75	ENSMUST00000142145.1	retained_intron	+
chr1_45851619_45853296	chr1	45851619	45853296	ENSMUSG00000025995.9	Wdr75	ENSMUST00000147308.1	protein_coding	+
chr1_45981418_45983784	chr1	45981418	45983784	ENSMUSG00000025993.4	Slc40a1	ENSMUST00000027137.4	protein_coding	-
chr1_46123062_46124307	chr1	46123062	46124307	ENSMUSG00000041144.8	Dnahc7b	ENSMUST00000069293.7	protein_coding	+
chr1_46123062_46124307	chr1	46123062	46124307	ENSMUSG00000041144.8	Dnahc7b	ENSMUST00000094964.4	protein_coding	+
chr1_46909459_46911510	chr1	46909459	46911510	ENSMUSG00000025986.5	Slc39a10	ENSMUST00000027131.4	protein_coding	-
chr1_50616431_50616852	chr1	50616431	50616852	ENSMUSG00000084531.1	7SK	ENSMUST00000122582.1	misc_RNA	+
chr1_50981720_50985161	chr1	50981720	50985161	ENSMUSG00000026109.7	Tmeff2	ENSMUST00000081851.3	protein_coding	+
chr1_50981720_50985161	chr1	50981720	50985161	ENSMUSG00000026109.7	Tmeff2	ENSMUST00000114567.1	protein_coding	+
chr1_51345499_51347282	chr1	51345499	51347282	ENSMUSG00000045954.6	Sdpr	ENSMUST00000051572.6	protein_coding	+
chr1_51533791_51536086	chr1	51533791	51536086	ENSMUSG00000026107.5	Obfc2a	ENSMUST00000027279.5	protein_coding	-
chr1_51823904_51824104	chr1	51823904	51824104	ENSMUSG00000018417.8	Myo1b	ENSMUST00000140930.1	retained_intron	-
chr1_51826488_51827656	chr1	51826488	51827656	ENSMUSG00000018417.8	Myo1b	ENSMUST00000140731.1	processed_transcript	-
chr1_51838756_51839707	chr1	51838756	51839707	ENSMUSG00000018417.8	Myo1b	ENSMUST00000126952.1	retained_intron	-
chr1_51876826_51878186	chr1	51876826	51878186	ENSMUSG00000018417.8	Myo1b	ENSMUST00000135125.1	processed_transcript	-
chr1_51952383_51953585	chr1	51952383	51953585	ENSMUSG00000018417.8	Myo1b	ENSMUST00000144694.1	protein_coding	-
chr1_51963830_51965246	chr1	51963830	51965246	ENSMUSG00000018417.8	Myo1b	ENSMUST00000114541.1	protein_coding	-
chr1_51971668_51973346	chr1	51971668	51973346	ENSMUSG00000018417.8	Myo1b	ENSMUST00000126657.1	retained_intron	-
chr1_51971668_51973346	chr1	51971668	51973346	ENSMUSG00000018417.8	Myo1b	ENSMUST00000151525.1	retained_intron	-
chr1_51971668_51973346	chr1	51971668	51973346	ENSMUSG00000018417.8	Myo1b	ENSMUST00000018561.7	protein_coding	-
chr1_51971668_51973346	chr1	51971668	51973346	ENSMUSG00000018417.8	Myo1b	ENSMUST00000114537.2	protein_coding	-
chr1_51971668_51973346	chr1	51971668	51973346	ENSMUSG00000018417.8	Myo1b	ENSMUST00000046390.7	protein_coding	-
chr1_52064533_52066263	chr1	52064533	52066263	ENSMUSG00000062939.5	Stat4	ENSMUST00000027277.5	protein_coding	+
chr1_52175733_52177534	chr1	52175733	52177534	ENSMUSG00000026104.7	Stat1	ENSMUST00000070968.6	protein_coding	+
chr1_52205580_52208036	chr1	52205580	52208036	ENSMUSG00000026104.7	Stat1	ENSMUST00000087717.4	protein_coding	+
chr1_52226168_52228757	chr1	52226168	52228757	ENSMUSG00000026103.8	Gls	ENSMUST00000126221.1	retained_intron	-
chr1_52247602_52248128	chr1	52247602	52248128	ENSMUSG00000026103.8	Gls	ENSMUST00000129107.1	protein_coding	-
chr1_52247602_52248128	chr1	52247602	52248128	ENSMUSG00000026103.8	Gls	ENSMUST00000138906.1	retained_intron	-
chr1_52247602_52248128	chr1	52247602	52248128	ENSMUSG00000026103.8	Gls	ENSMUST00000156887.1	protein_coding	-
chr1_52288732_52291001	chr1	52288732	52291001	ENSMUSG00000026103.8	Gls	ENSMUST00000142976.1	processed_transcript	-
chr1_52288732_52291001	chr1	52288732	52291001	ENSMUSG00000026103.8	Gls	ENSMUST00000114510.1	protein_coding	-
chr1_52288732_52291001	chr1	52288732	52291001	ENSMUSG00000026103.8	Gls	ENSMUST00000114512.1	protein_coding	-
chr1_52288732_52291001	chr1	52288732	52291001	ENSMUSG00000026103.8	Gls	ENSMUST00000114513.2	protein_coding	-
chr1_52521614_52523924	chr1	52521614	52523924	ENSMUSG00000002881.8	Nab1	ENSMUST00000167732.1	retained_intron	-
chr1_52555978_52558242	chr1	52555978	52558242	ENSMUSG00000002881.8	Nab1	ENSMUST00000164747.1	protein_coding	-
chr1_52555978_52558242	chr1	52555978	52558242	ENSMUSG00000002881.8	Nab1	ENSMUST00000168082.1	processed_transcript	-
chr1_52555978_52558242	chr1	52555978	52558242	ENSMUSG00000002881.8	Nab1	ENSMUST00000069792.7	protein_coding	-
chr1_52687259_52688776	chr1	52687259	52688776	ENSMUSG00000043015.8	Tmem194b	ENSMUST00000165859.1	protein_coding	+
chr1_52687259_52688776	chr1	52687259	52688776	ENSMUSG00000043015.8	Tmem194b	ENSMUST00000087708.3	protein_coding	+
chr1_52725953_52726186	chr1	52725953	52726186	ENSMUSG00000041439.8	Mfsd6	ENSMUST00000149887.1	processed_transcript	-
chr1_52765516_52765950	chr1	52765516	52765950	ENSMUSG00000041439.8	Mfsd6	ENSMUST00000147758.1	protein_coding	-
chr1_52782739_52784838	chr1	52782739	52784838	ENSMUSG00000041439.8	Mfsd6	ENSMUST00000147421.1	retained_intron	-
chr1_52782739_52784838	chr1	52782739	52784838	ENSMUSG00000041439.8	Mfsd6	ENSMUST00000087701.3	protein_coding	-
chr1_52782739_52784838	chr1	52782739	52784838	ENSMUSG00000041439.8	Mfsd6	ENSMUST00000087702.3	protein_coding	-
chr1_52782739_52784838	chr1	52782739	52784838	ENSMUSG00000041439.8	Mfsd6	ENSMUST00000156876.1	protein_coding	-
chr1_52851466_52851948	chr1	52851466	52851948	ENSMUSG00000026102.2	Inpp1	ENSMUST00000159607.1	retained_intron	-
chr1_52855607_52857784	chr1	52855607	52857784	ENSMUSG00000026102.2	Inpp1	ENSMUST00000159725.1	protein_coding	-
chr1_52873264_52875011	chr1	52873264	52875011	ENSMUSG00000026102.2	Inpp1	ENSMUST00000162351.1	retained_intron	-
chr1_52873264_52875011	chr1	52873264	52875011	ENSMUSG00000026102.2	Inpp1	ENSMUST00000162576.1	protein_coding	-
chr1_52873264_52875011	chr1	52873264	52875011	ENSMUSG00000026102.2	Inpp1	ENSMUST00000027271.2	protein_coding	-
chr1_52900952_52902964	chr1	52900952	52902964	ENSMUSG00000041426.6	Hibch	ENSMUST00000159352.1	protein_coding	+
chr1_52900952_52902964	chr1	52900952	52902964	ENSMUSG00000041426.6	Hibch	ENSMUST00000161125.1	retained_intron	+
chr1_52900952_52902964	chr1	52900952	52902964	ENSMUSG00000041426.6	Hibch	ENSMUST00000044478.6	protein_coding	+
chr1_52921952_52922157	chr1	52921952	52922157	ENSMUSG00000041426.6	Hibch	ENSMUST00000159431.1	processed_transcript	+
chr1_53008744_53010636	chr1	53008744	53010636	ENSMUSG00000043629.6	1700019D03Rik	ENSMUST00000050567.4	protein_coding	-
chr1_53008744_53010636	chr1	53008744	53010636	ENSMUSG00000043629.6	1700019D03Rik	ENSMUST00000114492.1	protein_coding	-
chr1_53019955_53020408	chr1	53019955	53020408	ENSMUSG00000043629.6	1700019D03Rik	ENSMUST00000114493.1	protein_coding	-
chr1_53118382_53120399	chr1	53118382	53120399	ENSMUSG00000026100.5	Mstn	ENSMUST00000027269.5	protein_coding	+
chr1_53157070_53157270	chr1	53157070	53157270	ENSMUSG00000089334.1	SNORA17	ENSMUST00000158709.1	snoRNA	+
chr1_53244099_53244628	chr1	53244099	53244628	ENSMUSG00000060715.3	1700019A02Rik	ENSMUST00000072235.3	protein_coding	-
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026097.3	Ormdl1	ENSMUST00000135746.1	retained_intron	+
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026097.3	Ormdl1	ENSMUST00000027266.3	protein_coding	+
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026098.7	Pms1	ENSMUST00000126412.1	protein_coding	-
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026098.7	Pms1	ENSMUST00000126590.1	protein_coding	-
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026098.7	Pms1	ENSMUST00000128337.1	protein_coding	-
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026098.7	Pms1	ENSMUST00000142922.1	processed_transcript	-
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026098.7	Pms1	ENSMUST00000135246.1	protein_coding	-
chr1_53353302_53354685	chr1	53353302	53354685	ENSMUSG00000026098.7	Pms1	ENSMUST00000027267.7	protein_coding	-
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000027265.3	protein_coding	+
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000151296.1	nonsense_mediated_decay	+
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000135786.1	processed_transcript	+
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000153939.1	retained_intron	+
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000164503.1	protein_coding	+
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000114484.1	protein_coding	+
chr1_53369764_53371167	chr1	53369764	53371167	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000135614.1	nonsense_mediated_decay	+
chr1_53375993_53376579	chr1	53375993	53376579	ENSMUSG00000026096.7	Osgepl1	ENSMUST00000150115.1	retained_intron	+
chr1_53405249_53405461	chr1	53405249	53405461	ENSMUSG00000026095.6	Asnsd1	ENSMUST00000123519.1	processed_transcript	-
chr1_53408989_53409915	chr1	53408989	53409915	ENSMUSG00000026095.6	Asnsd1	ENSMUST00000136468.1	retained_intron	-
chr1_53408989_53409915	chr1	53408989	53409915	ENSMUSG00000026095.6	Asnsd1	ENSMUST00000147021.1	nonsense_mediated_decay	-
chr1_53408989_53409915	chr1	53408989	53409915	ENSMUSG00000026095.6	Asnsd1	ENSMUST00000027264.3	protein_coding	-
chr1_53408989_53409915	chr1	53408989	53409915	ENSMUSG00000026095.6	Asnsd1	ENSMUST00000097744.4	protein_coding	-
chr1_53408989_53409915	chr1	53408989	53409915	ENSMUSG00000026095.6	Asnsd1	ENSMUST00000144660.1	processed_transcript	-
chr1_53499366_53500223	chr1	53499366	53500223	ENSMUSG00000092657.1	AC122925.1	ENSMUST00000174916.1	miRNA	-
chr1_53840956_53842375	chr1	53840956	53842375	ENSMUSG00000026094.8	Stk17b	ENSMUST00000027263.7	protein_coding	-
chr1_53897957_53898490	chr1	53897957	53898490	ENSMUSG00000042807.9	Hecw2	ENSMUST00000150677.1	processed_transcript	-
chr1_53923089_53923584	chr1	53923089	53923584	ENSMUSG00000042807.9	Hecw2	ENSMUST00000152870.1	processed_transcript	-
chr1_53943640_53943936	chr1	53943640	53943936	ENSMUSG00000087949.1	U1	ENSMUST00000157324.1	snRNA	-
chr1_54250738_54252417	chr1	54250738	54252417	ENSMUSG00000042807.9	Hecw2	ENSMUST00000146850.1	retained_intron	-
chr1_54250738_54252417	chr1	54250738	54252417	ENSMUSG00000042807.9	Hecw2	ENSMUST00000097741.2	protein_coding	-
chr1_54250738_54252417	chr1	54250738	54252417	ENSMUSG00000042807.9	Hecw2	ENSMUST00000120904.1	protein_coding	-
chr1_54250738_54252417	chr1	54250738	54252417	ENSMUSG00000042807.9	Hecw2	ENSMUST00000087659.4	protein_coding	-
chr1_54306756_54308601	chr1	54306756	54308601	ENSMUSG00000025983.5	Ccdc150	ENSMUST00000027128.4	protein_coding	+
chr1_54306756_54308601	chr1	54306756	54308601	ENSMUSG00000025983.5	Ccdc150	ENSMUST00000161988.1	retained_intron	+
chr1_54306756_54308601	chr1	54306756	54308601	ENSMUSG00000025983.5	Ccdc150	ENSMUST00000160472.1	nonsense_mediated_decay	+
chr1_54386586_54386848	chr1	54386586	54386848	ENSMUSG00000025983.5	Ccdc150	ENSMUST00000163072.1	processed_transcript	+
chr1_54411491_54412036	chr1	54411491	54412036	ENSMUSG00000025983.5	Ccdc150	ENSMUST00000159682.1	retained_intron	+
chr1_54495163_54496348	chr1	54495163	54496348	ENSMUSG00000041303.6	Gtf3c3	ENSMUST00000041638.6	protein_coding	-
chr1_54613568_54615327	chr1	54613568	54615327	ENSMUSG00000070889.4	Pgap1	ENSMUST00000094950.4	protein_coding	-
chr1_54982181_54983843	chr1	54982181	54983843	ENSMUSG00000052331.7	Ankrd44	ENSMUST00000044359.8	protein_coding	-
chr1_55082831_55084743	chr1	55082831	55084743	ENSMUSG00000025982.7	Sf3b1	ENSMUST00000027127.7	protein_coding	-
chr1_55108717_55110385	chr1	55108717	55110385	ENSMUSG00000025981.7	Coq10b	ENSMUST00000027125.5	protein_coding	+
chr1_55108717_55110385	chr1	55108717	55110385	ENSMUSG00000025981.7	Coq10b	ENSMUST00000087617.4	protein_coding	+
chr1_55143771_55145796	chr1	55143771	55145796	ENSMUSG00000073676.4	Hspe1	ENSMUST00000075242.6	protein_coding	+
chr1_55143771_55145796	chr1	55143771	55145796	ENSMUSG00000073676.4	Hspe1	ENSMUST00000134628.1	retained_intron	+
chr1_55143771_55145796	chr1	55143771	55145796	ENSMUSG00000025980.8	Hspd1	ENSMUST00000144077.1	protein_coding	-
chr1_55143771_55145796	chr1	55143771	55145796	ENSMUSG00000025980.8	Hspd1	ENSMUST00000127861.1	protein_coding	-
chr1_55143771_55145796	chr1	55143771	55145796	ENSMUSG00000025980.8	Hspd1	ENSMUST00000027123.8	protein_coding	-
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000162364.1	protein_coding	+
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000159311.1	protein_coding	+
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000162930.1	retained_intron	+
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000027122.7	protein_coding	+
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000161122.1	nonsense_mediated_decay	+
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000162553.1	protein_coding	+
chr1_55187392_55188942	chr1	55187392	55188942	ENSMUSG00000025979.7	Mob4	ENSMUST00000159743.1	retained_intron	+
chr1_55217774_55219270	chr1	55217774	55219270	ENSMUSG00000061863.5	Gm6822	ENSMUST00000161440.1	transcribed_processed_pseudogene	-
chr1_55217774_55219270	chr1	55217774	55219270	ENSMUSG00000061863.5	Gm6822	ENSMUST00000085491.6	transcribed_processed_pseudogene	-
chr1_55282842_55283849	chr1	55282842	55283849	ENSMUSG00000073675.3	Gm10561	ENSMUST00000097736.3	lincRNA	+
chr1_55282842_55283849	chr1	55282842	55283849	ENSMUSG00000025978.8	Rftn2	ENSMUST00000141107.1	processed_transcript	-
chr1_55282842_55283849	chr1	55282842	55283849	ENSMUSG00000025978.8	Rftn2	ENSMUST00000114428.2	protein_coding	-
chr1_55282842_55283849	chr1	55282842	55283849	ENSMUSG00000025978.8	Rftn2	ENSMUST00000132055.1	nonsense_mediated_decay	-
chr1_55282842_55283849	chr1	55282842	55283849	ENSMUSG00000025978.8	Rftn2	ENSMUST00000027121.8	protein_coding	-
chr1_55293569_55295155	chr1	55293569	55295155	ENSMUSG00000046994.8	Mars2	ENSMUST00000061334.8	protein_coding	+
chr1_55419004_55420972	chr1	55419004	55420972	ENSMUSG00000025977.9	Boll	ENSMUST00000159398.1	protein_coding	-
chr1_55419004_55420972	chr1	55419004	55420972	ENSMUSG00000025977.9	Boll	ENSMUST00000114423.3	protein_coding	-
chr1_55419004_55420972	chr1	55419004	55420972	ENSMUSG00000025977.9	Boll	ENSMUST00000087585.3	protein_coding	-
chr1_55419004_55420972	chr1	55419004	55420972	ENSMUSG00000025977.9	Boll	ENSMUST00000159564.2	nonsense_mediated_decay	-
chr1_55419004_55420972	chr1	55419004	55420972	ENSMUSG00000025977.9	Boll	ENSMUST00000161472.2	protein_coding	-
chr1_55461946_55464561	chr1	55461946	55464561	ENSMUSG00000038349.8	Plcl1	ENSMUST00000097735.2	protein_coding	+
chr1_55752747_55753497	chr1	55752747	55753497	ENSMUSG00000038349.8	Plcl1	ENSMUST00000042986.7	protein_coding	+
chr1_57029020_57030772	chr1	57029020	57030772	ENSMUSG00000038331.8	Satb2	ENSMUST00000042857.7	protein_coding	-
chr1_57433913_57435509	chr1	57433913	57435509	ENSMUSG00000038323.2	1700066M21Rik	ENSMUST00000042734.2	protein_coding	+
chr1_57433913_57435509	chr1	57433913	57435509	ENSMUSG00000084958.1	4930558J18Rik	ENSMUST00000143904.1	lincRNA	-
chr1_57447472_57449740	chr1	57447472	57449740	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000161092.1	retained_intron	-
chr1_57447472_57449740	chr1	57447472	57449740	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000162663.1	processed_transcript	-
chr1_57457217_57458221	chr1	57457217	57458221	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000163039.1	processed_transcript	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000025971.5	9430016H08Rik	ENSMUST00000027114.5	protein_coding	+
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000161780.1	protein_coding	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000160118.1	nonsense_mediated_decay	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000160837.1	protein_coding	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000160404.2	protein_coding	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000097732.4	retained_intron	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000079998.6	nonsense_mediated_decay	-
chr1_57462801_57464274	chr1	57462801	57464274	ENSMUSG00000048495.9	1110034B05Rik	ENSMUST00000162686.1	protein_coding	-
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000172287.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000168905.1	retained_intron	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000172068.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000163239.1	nonsense_mediated_decay	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000163922.1	retained_intron	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000167971.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000170139.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000171699.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000164302.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000167085.1	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000041978.7	protein_coding	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000168016.1	retained_intron	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000165235.1	retained_intron	+
chr1_57830192_57832959	chr1	57830192	57832959	ENSMUSG00000038305.7	Spats2l	ENSMUST00000168895.1	retained_intron	+
chr1_57901782_57902600	chr1	57901782	57902600	ENSMUSG00000038305.7	Spats2l	ENSMUST00000169772.1	protein_coding	+
chr1_57958552_57958840	chr1	57958552	57958840	ENSMUSG00000038305.7	Spats2l	ENSMUST00000164353.1	retained_intron	+
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000160130.1	retained_intron	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000162410.1	retained_intron	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000068000.3	retained_intron	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000159826.1	protein_coding	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000165606.1	protein_coding	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000161608.1	nonsense_mediated_decay	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000114410.3	protein_coding	-
chr1_58026084_58027336	chr1	58026084	58027336	ENSMUSG00000054770.9	Kctd18	ENSMUST00000164963.1	protein_coding	-
chr1_58052351_58053686	chr1	58052351	58053686	ENSMUSG00000026039.8	Sgol2	ENSMUST00000027202.8	protein_coding	+
chr1_58086125_58088675	chr1	58086125	58088675	ENSMUSG00000063558.4	Aox1	ENSMUST00000001027.6	protein_coding	+
chr1_58086125_58088675	chr1	58086125	58088675	ENSMUSG00000063558.4	Aox1	ENSMUST00000160168.1	retained_intron	+
chr1_58169487_58171264	chr1	58169487	58171264	ENSMUSG00000064294.6	Aox3	ENSMUST00000161549.1	retained_intron	+
chr1_58169487_58171264	chr1	58169487	58171264	ENSMUSG00000064294.6	Aox3	ENSMUST00000040999.7	protein_coding	+
chr1_58169487_58171264	chr1	58169487	58171264	ENSMUSG00000064294.6	Aox3	ENSMUST00000159014.1	retained_intron	+
chr1_58169487_58171264	chr1	58169487	58171264	ENSMUSG00000064294.6	Aox3	ENSMUST00000162011.1	retained_intron	+
chr1_58266946_58268185	chr1	58266946	58268185	ENSMUSG00000038242.6	Aox4	ENSMUST00000040442.5	protein_coding	+
chr1_58266946_58268185	chr1	58266946	58268185	ENSMUSG00000038242.6	Aox4	ENSMUST00000161833.1	processed_transcript	+
chr1_58266946_58268185	chr1	58266946	58268185	ENSMUSG00000038242.6	Aox4	ENSMUST00000159240.1	processed_transcript	+
chr1_58296765_58297590	chr1	58296765	58297590	ENSMUSG00000038242.6	Aox4	ENSMUST00000161926.1	processed_transcript	+
chr1_58371949_58372731	chr1	58371949	58372731	ENSMUSG00000089822.1	Gm15759	ENSMUST00000161126.1	antisense	-
chr1_58448764_58450963	chr1	58448764	58450963	ENSMUSG00000051223.8	Bzw1	ENSMUST00000050552.8	protein_coding	+
chr1_58479666_58481307	chr1	58479666	58481307	ENSMUSG00000026034.10	Clk1	ENSMUST00000147258.1	retained_intron	-
chr1_58479666_58481307	chr1	58479666	58481307	ENSMUSG00000026034.10	Clk1	ENSMUST00000129577.1	retained_intron	-
chr1_58479666_58481307	chr1	58479666	58481307	ENSMUSG00000026034.10	Clk1	ENSMUST00000034868.7	protein_coding	-
chr1_58479666_58481307	chr1	58479666	58481307	ENSMUSG00000026034.10	Clk1	ENSMUST00000148330.1	nonsense_mediated_decay	-
chr1_58479666_58481307	chr1	58479666	58481307	ENSMUSG00000026034.10	Clk1	ENSMUST00000151338.1	nonsense_mediated_decay	-
chr1_58479666_58481307	chr1	58479666	58481307	ENSMUSG00000026034.10	Clk1	ENSMUST00000156931.1	retained_intron	-
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026036.10	Nif3l1	ENSMUST00000087521.6	protein_coding	+
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026036.10	Nif3l1	ENSMUST00000114337.1	protein_coding	+
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026036.10	Nif3l1	ENSMUST00000064224.6	protein_coding	+
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026036.10	Nif3l1	ENSMUST00000129759.1	nonsense_mediated_decay	+
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026036.10	Nif3l1	ENSMUST00000151272.1	protein_coding	+
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026035.9	Ppil3	ENSMUST00000124550.1	retained_intron	-
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026035.9	Ppil3	ENSMUST00000114345.2	protein_coding	-
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026035.9	Ppil3	ENSMUST00000081677.5	protein_coding	-
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026035.9	Ppil3	ENSMUST00000114348.1	protein_coding	-
chr1_58501587_58503178	chr1	58501587	58503178	ENSMUSG00000026035.9	Ppil3	ENSMUST00000117069.1	protein_coding	-
chr1_58560953_58562366	chr1	58560953	58562366	ENSMUSG00000085054.2	Gm15834	ENSMUST00000160947.1	lincRNA	+
chr1_58560953_58562366	chr1	58560953	58562366	ENSMUSG00000085054.2	Gm15834	ENSMUST00000129740.2	lincRNA	+
chr1_58560953_58562366	chr1	58560953	58562366	ENSMUSG00000085054.2	Gm15834	ENSMUST00000139825.1	lincRNA	+
chr1_58560953_58562366	chr1	58560953	58562366	ENSMUSG00000026037.8	Orc2	ENSMUST00000027198.5	protein_coding	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000026032.8	Ndufb3	ENSMUST00000027193.8	protein_coding	+
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000159185.1	retained_intron	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000159980.1	retained_intron	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000160546.1	processed_transcript	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000161000.1	protein_coding	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000038372.7	protein_coding	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000097724.3	protein_coding	-
chr1_58642191_58643790	chr1	58642191	58643790	ENSMUSG00000038174.8	Fam126b	ENSMUST00000161600.1	protein_coding	-
chr1_58752764_58753230	chr1	58752764	58753230	ENSMUSG00000047528.7	Als2cr12	ENSMUST00000055313.7	protein_coding	-
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000140940.1	processed_transcript	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000149874.1	processed_transcript	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000164900.1	processed_transcript	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000156870.1	processed_transcript	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000124567.1	processed_transcript	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000097723.2	processed_transcript	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000097722.2	protein_coding	+
chr1_58767893_58769767	chr1	58767893	58769767	ENSMUSG00000026031.9	Cflar	ENSMUST00000114313.1	protein_coding	+
chr1_58769987_58771001	chr1	58769987	58771001	ENSMUSG00000026031.9	Cflar	ENSMUST00000114309.1	protein_coding	+
chr1_58769987_58771001	chr1	58769987	58771001	ENSMUSG00000026031.9	Cflar	ENSMUST00000123553.1	processed_transcript	+
chr1_58769987_58771001	chr1	58769987	58771001	ENSMUSG00000026031.9	Cflar	ENSMUST00000069333.7	protein_coding	+
chr1_58851702_58853147	chr1	58851702	58853147	ENSMUSG00000026029.8	Casp8	ENSMUST00000027189.8	protein_coding	+
chr1_58858705_58860365	chr1	58858705	58860365	ENSMUSG00000026029.8	Casp8	ENSMUST00000165549.1	protein_coding	+
chr1_58978380_58978580	chr1	58978380	58978580	ENSMUSG00000026028.6	Trak2	ENSMUST00000174359.1	processed_transcript	-
chr1_59002036_59003173	chr1	59002036	59003173	ENSMUSG00000026028.6	Trak2	ENSMUST00000174120.1	protein_coding	-
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026027.7	Stradb	ENSMUST00000123965.1	retained_intron	+
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026027.7	Stradb	ENSMUST00000147637.1	retained_intron	+
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026027.7	Stradb	ENSMUST00000114296.1	protein_coding	+
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026027.7	Stradb	ENSMUST00000123301.1	nonsense_mediated_decay	+
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026027.7	Stradb	ENSMUST00000153990.1	nonsense_mediated_decay	+
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026027.7	Stradb	ENSMUST00000027185.4	protein_coding	+
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026028.6	Trak2	ENSMUST00000173719.1	retained_intron	-
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026028.6	Trak2	ENSMUST00000173590.1	protein_coding	-
chr1_59029672_59031385	chr1	59029672	59031385	ENSMUSG00000026028.6	Trak2	ENSMUST00000027186.5	protein_coding	-
chr1_59127650_59128387	chr1	59127650	59128387	ENSMUSG00000077616.1	SNORA17	ENSMUST00000104428.1	snoRNA	+
chr1_59141214_59141545	chr1	59141214	59141545	ENSMUSG00000072295.4	Als2cr11	ENSMUST00000149784.1	processed_transcript	-
chr1_59151192_59151942	chr1	59151192	59151942	ENSMUSG00000072295.4	Als2cr11	ENSMUST00000097080.3	protein_coding	-
chr1_59151192_59151942	chr1	59151192	59151942	ENSMUSG00000072295.4	Als2cr11	ENSMUST00000114295.1	protein_coding	-
chr1_59176164_59177730	chr1	59176164	59177730	ENSMUSG00000038079.7	Als2cr4	ENSMUST00000087475.4	protein_coding	-
chr1_59176164_59177730	chr1	59176164	59177730	ENSMUSG00000038079.7	Als2cr4	ENSMUST00000094918.4	protein_coding	-
chr1_59176164_59177730	chr1	59176164	59177730	ENSMUSG00000038079.7	Als2cr4	ENSMUST00000094917.3	protein_coding	-
chr1_59219328_59221429	chr1	59219328	59221429	ENSMUSG00000079550.2	Mpp4	ENSMUST00000114275.2	protein_coding	-
chr1_59293538_59295161	chr1	59293538	59295161	ENSMUSG00000026024.8	Als2	ENSMUST00000160945.1	processed_transcript	-
chr1_59293538_59295161	chr1	59293538	59295161	ENSMUSG00000026024.8	Als2	ENSMUST00000159166.1	retained_intron	-
chr1_59293538_59295161	chr1	59293538	59295161	ENSMUSG00000026024.8	Als2	ENSMUST00000163058.1	protein_coding	-
chr1_59293538_59295161	chr1	59293538	59295161	ENSMUSG00000026024.8	Als2	ENSMUST00000027178.6	protein_coding	-
chr1_59313454_59313799	chr1	59313454	59313799	ENSMUSG00000026023.9	Cdk15	ENSMUST00000160662.1	protein_coding	+
chr1_59313454_59313799	chr1	59313454	59313799	ENSMUSG00000026023.9	Cdk15	ENSMUST00000114248.2	protein_coding	+
chr1_59313454_59313799	chr1	59313454	59313799	ENSMUSG00000026023.9	Cdk15	ENSMUST00000036295.8	protein_coding	+
chr1_59313454_59313799	chr1	59313454	59313799	ENSMUSG00000026023.9	Cdk15	ENSMUST00000162487.1	processed_transcript	+
chr1_59355061_59356370	chr1	59355061	59356370	ENSMUSG00000026023.9	Cdk15	ENSMUST00000162906.1	processed_transcript	+
chr1_59538154_59541329	chr1	59538154	59541329	ENSMUSG00000041075.7	Fzd7	ENSMUST00000114246.2	protein_coding	+
chr1_59538154_59541329	chr1	59538154	59541329	ENSMUSG00000041075.7	Fzd7	ENSMUST00000037105.6	protein_coding	+
chr1_59549080_59549663	chr1	59549080	59549663	ENSMUSG00000092149.1	Gm17453	ENSMUST00000169947.1	lincRNA	-
chr1_59572679_59573774	chr1	59572679	59573774	ENSMUSG00000047361.8	Gm973	ENSMUST00000114243.1	protein_coding	+
chr1_59572679_59573774	chr1	59572679	59573774	ENSMUSG00000047361.8	Gm973	ENSMUST00000166065.1	protein_coding	+
chr1_59726707_59728389	chr1	59726707	59728389	ENSMUSG00000026021.9	Sumo1	ENSMUST00000123857.1	retained_intron	-
chr1_59726707_59728389	chr1	59726707	59728389	ENSMUSG00000026021.9	Sumo1	ENSMUST00000091374.2	protein_coding	-
chr1_59741294_59742741	chr1	59741294	59742741	ENSMUSG00000026020.2	Nop58	ENSMUST00000027174.2	protein_coding	+
chr1_59819089_59821829	chr1	59819089	59821829	ENSMUSG00000067336.4	Bmpr2	ENSMUST00000087435.4	protein_coding	+
chr1_59969156_59971282	chr1	59969156	59971282	ENSMUSG00000041040.6	Fam117b	ENSMUST00000036540.5	protein_coding	+
chr1_60099102_60100373	chr1	60099102	60100373	ENSMUSG00000026018.6	Ica1l	ENSMUST00000027172.6	protein_coding	-
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026017.5	Carf	ENSMUST00000130075.1	nonsense_mediated_decay	+
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026017.5	Carf	ENSMUST00000124986.1	protein_coding	+
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026017.5	Carf	ENSMUST00000150008.1	retained_intron	+
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026019.9	Wdr12	ENSMUST00000133767.1	retained_intron	-
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026019.9	Wdr12	ENSMUST00000143342.1	protein_coding	-
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026019.9	Wdr12	ENSMUST00000141417.1	protein_coding	-
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026019.9	Wdr12	ENSMUST00000027173.8	protein_coding	-
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026019.9	Wdr12	ENSMUST00000117438.1	protein_coding	-
chr1_60153958_60155667	chr1	60153958	60155667	ENSMUSG00000026019.9	Wdr12	ENSMUST00000122038.1	protein_coding	-
chr1_60236410_60238322	chr1	60236410	60238322	ENSMUSG00000073664.4	Nbeal1	ENSMUST00000035569.5	protein_coding	+
chr1_60236410_60238322	chr1	60236410	60238322	ENSMUSG00000073664.4	Nbeal1	ENSMUST00000160834.1	protein_coding	+
chr1_60399284_60401085	chr1	60399284	60401085	ENSMUSG00000049439.7	Cyp20a1	ENSMUST00000060608.6	protein_coding	+
chr1_60399284_60401085	chr1	60399284	60401085	ENSMUSG00000049439.7	Cyp20a1	ENSMUST00000114202.1	protein_coding	+
chr1_60399284_60401085	chr1	60399284	60401085	ENSMUSG00000049439.7	Cyp20a1	ENSMUST00000148443.1	nonsense_mediated_decay	+
chr1_60465706_60467777	chr1	60465706	60467777	ENSMUSG00000026782.8	Abi2	ENSMUST00000087417.5	protein_coding	+
chr1_60465706_60467777	chr1	60465706	60467777	ENSMUSG00000026782.8	Abi2	ENSMUST00000052332.7	protein_coding	+
chr1_60579942_60580142	chr1	60579942	60580142	ENSMUSG00000081562.1	Gm11575	ENSMUST00000122243.1	transcribed_processed_pseudogene	-
chr1_60622011_60624474	chr1	60622011	60624474	ENSMUSG00000026014.7	Raph1	ENSMUST00000142258.1	protein_coding	-
chr1_60622011_60624474	chr1	60622011	60624474	ENSMUSG00000026014.7	Raph1	ENSMUST00000140485.1	protein_coding	-
chr1_60622011_60624474	chr1	60622011	60624474	ENSMUSG00000026014.7	Raph1	ENSMUST00000127573.1	protein_coding	-
chr1_60622011_60624474	chr1	60622011	60624474	ENSMUSG00000026014.7	Raph1	ENSMUST00000090293.4	protein_coding	-
chr1_60760434_60760676	chr1	60760434	60760676	ENSMUSG00000082209.1	Eif4a-ps4	ENSMUST00000122226.1	transcribed_processed_pseudogene	+
chr1_60773409_60773801	chr1	60773409	60773801	ENSMUSG00000026012.2	Cd28	ENSMUST00000132833.1	processed_transcript	+
chr1_60802393_60803456	chr1	60802393	60803456	ENSMUSG00000026012.2	Cd28	ENSMUST00000027165.2	protein_coding	+
chr1_60802393_60803456	chr1	60802393	60803456	ENSMUSG00000026012.2	Cd28	ENSMUST00000153207.1	processed_transcript	+
chr1_60834926_60836404	chr1	60834926	60836404	ENSMUSG00000085965.1	2310016D23Rik	ENSMUST00000130082.1	processed_transcript	+
chr1_60838343_60839118	chr1	60838343	60839118	ENSMUSG00000086795.1	Gm11579	ENSMUST00000145502.1	lincRNA	-
chr1_60866052_60866683	chr1	60866052	60866683	ENSMUSG00000083355.1	Gm11581	ENSMUST00000122024.1	transcribed_processed_pseudogene	+
chr1_60965543_60966170	chr1	60965543	60966170	ENSMUSG00000026011.6	Ctla4	ENSMUST00000027164.2	protein_coding	+
chr1_60965543_60966170	chr1	60965543	60966170	ENSMUSG00000026011.6	Ctla4	ENSMUST00000097720.3	protein_coding	+
chr1_60965543_60966170	chr1	60965543	60966170	ENSMUSG00000026011.6	Ctla4	ENSMUST00000144147.1	processed_transcript	+
chr1_61005026_61005309	chr1	61005026	61005309	ENSMUSG00000080800.1	Gm11582	ENSMUST00000121041.1	transcribed_processed_pseudogene	-
chr1_61034325_61035265	chr1	61034325	61035265	ENSMUSG00000026009.8	Icos	ENSMUST00000102827.3	protein_coding	+
chr1_61034325_61035265	chr1	61034325	61035265	ENSMUSG00000026009.8	Icos	ENSMUST00000027162.5	protein_coding	+
chr1_61363303_61363503	chr1	61363303	61363503	ENSMUSG00000085248.1	Gm11587	ENSMUST00000128274.1	lincRNA	+
chr1_61527255_61530215	chr1	61527255	61530215	ENSMUSG00000089546.1	U6	ENSMUST00000158921.1	snRNA	+
chr1_61667071_61667794	chr1	61667071	61667794	ENSMUSG00000086009.1	4930587A21Rik	ENSMUST00000128588.1	antisense	-
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000075374.3	protein_coding	+
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000138768.1	protein_coding	+
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000063725.5	protein_coding	+
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000129030.1	processed_transcript	+
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000046673.4	protein_coding	+
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000094906.2	protein_coding	+
chr1_61684523_61686725	chr1	61684523	61686725	ENSMUSG00000052062.7	Pard3b	ENSMUST00000046451.5	protein_coding	+
chr1_61897939_61898280	chr1	61897939	61898280	ENSMUSG00000085842.1	4930448K12Rik	ENSMUST00000130699.1	antisense	-
chr1_61897939_61898280	chr1	61897939	61898280	ENSMUSG00000085842.1	4930448K12Rik	ENSMUST00000138535.1	antisense	-
chr1_62545229_62546520	chr1	62545229	62546520	ENSMUSG00000085400.1	Gm11610	ENSMUST00000147177.1	antisense	-
chr1_62685450_62686087	chr1	62685450	62686087	ENSMUSG00000046526.6	Pard3b	ENSMUST00000058059.6	pseudogene	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000102822.2	protein_coding	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000075144.5	protein_coding	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000126344.1	processed_transcript	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000063594.6	protein_coding	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000114157.2	protein_coding	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000114155.1	protein_coding	+
chr1_62749665_62750688	chr1	62749665	62750688	ENSMUSG00000025969.9	Nrp2	ENSMUST00000027112.6	protein_coding	+
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000084799.1	Gm11602	ENSMUST00000138611.1	processed_transcript	+
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000040865.8	Ino80d	ENSMUST00000153992.1	protein_coding	-
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000040865.8	Ino80d	ENSMUST00000137511.1	protein_coding	-
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000040865.8	Ino80d	ENSMUST00000046020.7	protein_coding	-
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000040865.8	Ino80d	ENSMUST00000097718.2	protein_coding	-
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000040865.8	Ino80d	ENSMUST00000165066.1	protein_coding	-
chr1_63159291_63162011	chr1	63159291	63162011	ENSMUSG00000040865.8	Ino80d	ENSMUST00000172416.1	protein_coding	-
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000129339.1	protein_coding	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000142062.1	nonsense_mediated_decay	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000148553.1	processed_transcript	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000135877.1	nonsense_mediated_decay	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000027108.6	nonsense_mediated_decay	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000126469.1	processed_transcript	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000174890.1	nonsense_mediated_decay	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025967.9	Eef1b2	ENSMUST00000126795.2	nonsense_mediated_decay	+
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025968.9	Ndufs1	ENSMUST00000140612.1	processed_transcript	-
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025968.9	Ndufs1	ENSMUST00000168099.1	protein_coding	-
chr1_63222549_63224135	chr1	63222549	63224135	ENSMUSG00000025968.9	Ndufs1	ENSMUST00000027111.8	protein_coding	-
chr1_63246758_63247309	chr1	63246758	63247309	ENSMUSG00000086730.1	Gm11607	ENSMUST00000141027.1	lincRNA	+
chr1_63259968_63261332	chr1	63259968	63261332	ENSMUSG00000046856.7	Gpr1	ENSMUST00000050536.7	protein_coding	-
chr1_63318752_63321232	chr1	63318752	63321232	ENSMUSG00000027520.8	Zdbf2	ENSMUST00000114132.1	protein_coding	+
chr1_63318752_63321232	chr1	63318752	63321232	ENSMUSG00000027520.8	Zdbf2	ENSMUST00000126932.1	protein_coding	+
chr1_63318752_63321232	chr1	63318752	63321232	ENSMUSG00000092705.1	AL669947.1	ENSMUST00000174964.1	miRNA	-
chr1_63318752_63321232	chr1	63318752	63321232	ENSMUSG00000087561.1	Gm11608	ENSMUST00000151616.1	antisense	-
chr1_63318752_63321232	chr1	63318752	63321232	ENSMUSG00000087561.1	Gm11608	ENSMUST00000153049.1	antisense	-
chr1_63491292_63493563	chr1	63491292	63493563	ENSMUSG00000025964.7	Adam23	ENSMUST00000114103.1	protein_coding	+
chr1_63491292_63493563	chr1	63491292	63493563	ENSMUSG00000025964.7	Adam23	ENSMUST00000087374.3	protein_coding	+
chr1_63491292_63493563	chr1	63491292	63493563	ENSMUSG00000025964.7	Adam23	ENSMUST00000114108.1	protein_coding	+
chr1_63491292_63493563	chr1	63491292	63493563	ENSMUSG00000025964.7	Adam23	ENSMUST00000114107.1	protein_coding	+
chr1_63491292_63493563	chr1	63491292	63493563	ENSMUSG00000025964.7	Adam23	ENSMUST00000114101.1	protein_coding	+
chr1_63491292_63493563	chr1	63491292	63493563	ENSMUSG00000025964.7	Adam23	ENSMUST00000146403.1	processed_transcript	+
chr1_63601692_63601913	chr1	63601692	63601913	ENSMUSG00000025964.7	Adam23	ENSMUST00000134704.1	processed_transcript	+
chr1_63776447_63777743	chr1	63776447	63777743	ENSMUSG00000025962.8	Fastkd2	ENSMUST00000027103.6	protein_coding	+
chr1_63776447_63777743	chr1	63776447	63777743	ENSMUSG00000025962.8	Fastkd2	ENSMUST00000148758.1	retained_intron	+
chr1_63776447_63777743	chr1	63776447	63777743	ENSMUSG00000025962.8	Fastkd2	ENSMUST00000087369.5	protein_coding	+
chr1_63776447_63777743	chr1	63776447	63777743	ENSMUSG00000025962.8	Fastkd2	ENSMUST00000128621.1	retained_intron	+
chr1_63776447_63777743	chr1	63776447	63777743	ENSMUSG00000025963.4	Mdh1b	ENSMUST00000027104.2	protein_coding	-
chr1_63776447_63777743	chr1	63776447	63777743	ENSMUSG00000025963.4	Mdh1b	ENSMUST00000114094.2	protein_coding	-
chr1_63815746_63816026	chr1	63815746	63816026	ENSMUSG00000025961.1	4933402D24Rik	ENSMUST00000027102.1	protein_coding	-
chr1_63964390_63965669	chr1	63964390	63965669	ENSMUSG00000082373.1	Gm13754	ENSMUST00000120486.1	transcribed_unprocessed_pseudogene	+
chr1_64010666_64011950	chr1	64010666	64011950	ENSMUSG00000044689.5	Gm13749	ENSMUST00000133244.1	lincRNA	+
chr1_64124885_64126025	chr1	64124885	64126025	ENSMUSG00000086836.1	Gm13748	ENSMUST00000149820.1	antisense	+
chr1_64167448_64169393	chr1	64167448	64169393	ENSMUSG00000025959.6	Klf7	ENSMUST00000135075.1	protein_coding	-
chr1_64167448_64169393	chr1	64167448	64169393	ENSMUSG00000025959.6	Klf7	ENSMUST00000142009.1	protein_coding	-
chr1_64167448_64169393	chr1	64167448	64169393	ENSMUSG00000025959.6	Klf7	ENSMUST00000114089.2	protein_coding	-
chr1_64167448_64169393	chr1	64167448	64169393	ENSMUSG00000025959.6	Klf7	ENSMUST00000055001.3	protein_coding	-
chr1_64167448_64169393	chr1	64167448	64169393	ENSMUSG00000025959.6	Klf7	ENSMUST00000114086.1	protein_coding	-
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000049932.5	protein_coding	+
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000087366.4	protein_coding	+
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000171164.1	protein_coding	+
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000171369.1	protein_coding	+
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000169761.1	protein_coding	+
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000027097.4	protein_coding	+
chr1_64578083_64580370	chr1	64578083	64580370	ENSMUSG00000025958.7	Creb1	ENSMUST00000027099.5	protein_coding	+
chr1_64662804_64664708	chr1	64662804	64664708	ENSMUSG00000025956.4	Mettl21a	ENSMUST00000161264.1	processed_transcript	-
chr1_64662804_64664708	chr1	64662804	64664708	ENSMUSG00000025956.4	Mettl21a	ENSMUST00000053469.1	protein_coding	-
chr1_64662804_64664708	chr1	64662804	64664708	ENSMUSG00000025956.4	Mettl21a	ENSMUST00000114079.2	protein_coding	-
chr1_64736364_64738505	chr1	64736364	64738505	ENSMUSG00000070871.4	Ccnyl1	ENSMUST00000114077.1	protein_coding	+
chr1_64736364_64738505	chr1	64736364	64738505	ENSMUSG00000070871.4	Ccnyl1	ENSMUST00000094898.3	protein_coding	+
chr1_64736364_64738505	chr1	64736364	64738505	ENSMUSG00000087213.1	2810408I11Rik	ENSMUST00000122813.1	antisense	-
chr1_64736364_64738505	chr1	64736364	64738505	ENSMUSG00000087213.1	2810408I11Rik	ENSMUST00000150749.1	antisense	-
chr1_64782252_64785736	chr1	64782252	64785736	ENSMUSG00000045005.8	Fzd5	ENSMUST00000063982.5	protein_coding	-
chr1_64782252_64785736	chr1	64782252	64785736	ENSMUSG00000045005.8	Fzd5	ENSMUST00000116133.2	protein_coding	-
chr1_64974410_64975469	chr1	64974410	64975469	ENSMUSG00000051344.7	Plekhm3	ENSMUST00000140857.1	retained_intron	-
chr1_65002724_65004164	chr1	65002724	65004164	ENSMUSG00000051344.7	Plekhm3	ENSMUST00000134097.1	processed_transcript	-
chr1_65002724_65004164	chr1	65002724	65004164	ENSMUSG00000051344.7	Plekhm3	ENSMUST00000123225.1	protein_coding	-
chr1_65002724_65004164	chr1	65002724	65004164	ENSMUSG00000051344.7	Plekhm3	ENSMUST00000097713.1	protein_coding	-
chr1_65002724_65004164	chr1	65002724	65004164	ENSMUSG00000051344.7	Plekhm3	ENSMUST00000139649.1	nonsense_mediated_decay	-
chr1_65169221_65170288	chr1	65169221	65170288	ENSMUSG00000044816.4	D630023F18Rik	ENSMUST00000153330.1	nonsense_mediated_decay	-
chr1_65169221_65170288	chr1	65169221	65170288	ENSMUSG00000044816.4	D630023F18Rik	ENSMUST00000050047.3	protein_coding	-
chr1_65169221_65170288	chr1	65169221	65170288	ENSMUSG00000044816.4	D630023F18Rik	ENSMUST00000148020.1	protein_coding	-
chr1_65224525_65226759	chr1	65224525	65226759	ENSMUSG00000025950.9	Idh1	ENSMUST00000027087.8	protein_coding	-
chr1_65224525_65226759	chr1	65224525	65226759	ENSMUSG00000025950.9	Idh1	ENSMUST00000097709.4	protein_coding	-
chr1_65232127_65234165	chr1	65232127	65234165	ENSMUSG00000025949.9	Pikfyve	ENSMUST00000097707.4	protein_coding	+
chr1_65232127_65234165	chr1	65232127	65234165	ENSMUSG00000025949.9	Pikfyve	ENSMUST00000081154.7	protein_coding	+
chr1_65232127_65234165	chr1	65232127	65234165	ENSMUSG00000025950.9	Idh1	ENSMUST00000169032.1	protein_coding	-
chr1_65357678_65359827	chr1	65357678	65359827	ENSMUSG00000025946.7	Pth2r	ENSMUST00000027083.6	protein_coding	+
chr1_66221144_66223598	chr1	66221144	66223598	ENSMUSG00000015222.10	Mtap2	ENSMUST00000156636.2	protein_coding	+
chr1_66221144_66223598	chr1	66221144	66223598	ENSMUSG00000015222.10	Mtap2	ENSMUST00000114017.1	protein_coding	+
chr1_66221144_66223598	chr1	66221144	66223598	ENSMUSG00000015222.10	Mtap2	ENSMUST00000114015.1	protein_coding	+
chr1_66221144_66223598	chr1	66221144	66223598	ENSMUSG00000015222.10	Mtap2	ENSMUST00000114018.2	protein_coding	+
chr1_66221144_66223598	chr1	66221144	66223598	ENSMUSG00000015222.10	Mtap2	ENSMUST00000124873.1	processed_transcript	+
chr1_66221144_66223598	chr1	66221144	66223598	ENSMUSG00000015222.10	Mtap2	ENSMUST00000125844.1	processed_transcript	+
chr1_66368130_66369271	chr1	66368130	66369271	ENSMUSG00000015222.10	Mtap2	ENSMUST00000114013.1	protein_coding	+
chr1_66368130_66369271	chr1	66368130	66369271	ENSMUSG00000015222.10	Mtap2	ENSMUST00000128673.1	retained_intron	+
chr1_66368130_66369271	chr1	66368130	66369271	ENSMUSG00000015222.10	Mtap2	ENSMUST00000137807.1	retained_intron	+
chr1_66368130_66369271	chr1	66368130	66369271	ENSMUSG00000015222.10	Mtap2	ENSMUST00000171377.1	protein_coding	+
chr1_66368130_66369271	chr1	66368130	66369271	ENSMUSG00000015222.10	Mtap2	ENSMUST00000024639.4	protein_coding	+
chr1_66368130_66369271	chr1	66368130	66369271	ENSMUSG00000015222.10	Mtap2	ENSMUST00000123647.1	protein_coding	+
chr1_66433049_66434115	chr1	66433049	66434115	ENSMUSG00000015222.10	Mtap2	ENSMUST00000151423.2	processed_transcript	+
chr1_66433049_66434115	chr1	66433049	66434115	ENSMUSG00000015222.10	Mtap2	ENSMUST00000145419.1	protein_coding	+
chr1_66433049_66434115	chr1	66433049	66434115	ENSMUSG00000015222.10	Mtap2	ENSMUST00000127388.1	processed_transcript	+
chr1_66433049_66434115	chr1	66433049	66434115	ENSMUSG00000015222.10	Mtap2	ENSMUST00000174590.1	retained_intron	+
chr1_66462415_66463135	chr1	66462415	66463135	ENSMUSG00000015222.10	Mtap2	ENSMUST00000172886.1	protein_coding	+
chr1_66462415_66463135	chr1	66462415	66463135	ENSMUSG00000015222.10	Mtap2	ENSMUST00000173778.1	protein_coding	+
chr1_66513902_66515717	chr1	66513902	66515717	ENSMUSG00000055567.8	Unc80	ENSMUST00000114009.1	protein_coding	+
chr1_66513902_66515717	chr1	66513902	66515717	ENSMUSG00000055567.8	Unc80	ENSMUST00000131944.1	nonsense_mediated_decay	+
chr1_66513902_66515717	chr1	66513902	66515717	ENSMUSG00000055567.8	Unc80	ENSMUST00000114008.2	protein_coding	+
chr1_66513902_66515717	chr1	66513902	66515717	ENSMUSG00000055567.8	Unc80	ENSMUST00000136727.1	processed_transcript	+
chr1_66513902_66515717	chr1	66513902	66515717	ENSMUSG00000055567.8	Unc80	ENSMUST00000061620.8	protein_coding	+
chr1_66513902_66515717	chr1	66513902	66515717	ENSMUSG00000055567.8	Unc80	ENSMUST00000087318.4	protein_coding	+
chr1_66746755_66748373	chr1	66746755	66748373	ENSMUSG00000026005.9	Rpe	ENSMUST00000027157.3	protein_coding	+
chr1_66746755_66748373	chr1	66746755	66748373	ENSMUSG00000026005.9	Rpe	ENSMUST00000113995.1	protein_coding	+
chr1_66746755_66748373	chr1	66746755	66748373	ENSMUSG00000026005.9	Rpe	ENSMUST00000142920.1	nonsense_mediated_decay	+
chr1_66746755_66748373	chr1	66746755	66748373	ENSMUSG00000026005.9	Rpe	ENSMUST00000151016.1	nonsense_mediated_decay	+
chr1_66862347_66864903	chr1	66862347	66864903	ENSMUSG00000026004.8	1110028C15Rik	ENSMUST00000113987.1	protein_coding	-
chr1_66862347_66864903	chr1	66862347	66864903	ENSMUSG00000026004.8	1110028C15Rik	ENSMUST00000068168.3	protein_coding	-
chr1_66862347_66864903	chr1	66862347	66864903	ENSMUSG00000026004.8	1110028C15Rik	ENSMUST00000042389.7	protein_coding	-
chr1_66908842_66911073	chr1	66908842	66911073	ENSMUSG00000026003.5	Acadl	ENSMUST00000027153.5	protein_coding	-
chr1_66980690_66981895	chr1	66980690	66981895	ENSMUSG00000061816.9	Myl1	ENSMUST00000120415.1	protein_coding	-
chr1_66980690_66981895	chr1	66980690	66981895	ENSMUSG00000061816.9	Myl1	ENSMUST00000150542.1	processed_transcript	-
chr1_66980690_66981895	chr1	66980690	66981895	ENSMUSG00000061816.9	Myl1	ENSMUST00000119429.1	protein_coding	-
chr1_66991895_66992142	chr1	66991895	66992142	ENSMUSG00000061816.9	Myl1	ENSMUST00000151328.2	retained_intron	-
chr1_66991895_66992142	chr1	66991895	66992142	ENSMUSG00000061816.9	Myl1	ENSMUST00000160100.1	protein_coding	-
chr1_66991895_66992142	chr1	66991895	66992142	ENSMUSG00000061816.9	Myl1	ENSMUST00000027151.5	protein_coding	-
chr1_67067351_67067876	chr1	67067351	67067876	ENSMUSG00000026000.10	Lancl1	ENSMUST00000133508.1	processed_transcript	-
chr1_67084630_67086190	chr1	67084630	67086190	ENSMUSG00000026000.10	Lancl1	ENSMUST00000149996.1	protein_coding	-
chr1_67084630_67086190	chr1	67084630	67086190	ENSMUSG00000026000.10	Lancl1	ENSMUST00000119559.1	protein_coding	-
chr1_67084630_67086190	chr1	67084630	67086190	ENSMUSG00000026000.10	Lancl1	ENSMUST00000027149.5	protein_coding	-
chr1_67084630_67086190	chr1	67084630	67086190	ENSMUSG00000026000.10	Lancl1	ENSMUST00000113979.3	protein_coding	-
chr1_67169353_67169962	chr1	67169353	67169962	ENSMUSG00000025991.8	Cps1	ENSMUST00000027144.7	protein_coding	+
chr1_69151634_69155427	chr1	69151634	69155427	ENSMUSG00000087514.1	Gm16076	ENSMUST00000140116.1	sense_intronic	-
chr1_69151634_69155427	chr1	69151634	69155427	ENSMUSG00000062209.8	Erbb4	ENSMUST00000153432.1	protein_coding	-
chr1_69151634_69155427	chr1	69151634	69155427	ENSMUSG00000062209.8	Erbb4	ENSMUST00000097703.3	protein_coding	-
chr1_69151634_69155427	chr1	69151634	69155427	ENSMUSG00000062209.8	Erbb4	ENSMUST00000121473.1	protein_coding	-
chr1_69151634_69155427	chr1	69151634	69155427	ENSMUSG00000062209.8	Erbb4	ENSMUST00000119142.1	protein_coding	-
chr1_69873294_69874103	chr1	69873294	69874103	ENSMUSG00000053153.7	Spag16	ENSMUST00000161131.1	nonsense_mediated_decay	+
chr1_69873294_69874103	chr1	69873294	69874103	ENSMUSG00000053153.7	Spag16	ENSMUST00000065425.5	protein_coding	+
chr1_69873294_69874103	chr1	69873294	69874103	ENSMUSG00000053153.7	Spag16	ENSMUST00000113940.2	protein_coding	+
chr1_69998040_69998419	chr1	69998040	69998419	ENSMUSG00000053153.7	Spag16	ENSMUST00000161310.1	processed_transcript	+
chr1_70771460_70773193	chr1	70771460	70773193	ENSMUSG00000045648.8	Vwc2l	ENSMUST00000053922.5	protein_coding	+
chr1_70771460_70773193	chr1	70771460	70773193	ENSMUSG00000045648.8	Vwc2l	ENSMUST00000159205.1	retained_intron	+
chr1_70771460_70773193	chr1	70771460	70773193	ENSMUSG00000045648.8	Vwc2l	ENSMUST00000161937.1	protein_coding	+
chr1_70771460_70773193	chr1	70771460	70773193	ENSMUSG00000045648.8	Vwc2l	ENSMUST00000162182.1	protein_coding	+
chr1_71148721_71150505	chr1	71148721	71150505	ENSMUSG00000026196.7	Bard1	ENSMUST00000027393.7	protein_coding	-
chr1_71461419_71461623	chr1	71461419	71461623	ENSMUSG00000050296.8	Abca12	ENSMUST00000087268.5	protein_coding	-
chr1_71603269_71604770	chr1	71603269	71604770	ENSMUSG00000026192.7	Atic	ENSMUST00000027384.5	protein_coding	+
chr1_71603269_71604770	chr1	71603269	71604770	ENSMUSG00000026192.7	Atic	ENSMUST00000148077.1	retained_intron	+
chr1_71603269_71604770	chr1	71603269	71604770	ENSMUSG00000026192.7	Atic	ENSMUST00000155769.1	retained_intron	+
chr1_71603269_71604770	chr1	71603269	71604770	ENSMUSG00000026192.7	Atic	ENSMUST00000136443.1	retained_intron	+
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000073652.4	Apol7d	ENSMUST00000097699.2	protein_coding	+
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000073652.4	Apol7d	ENSMUST00000127218.1	nonsense_mediated_decay	+
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000073652.4	Apol7d	ENSMUST00000126516.1	nonsense_mediated_decay	+
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000073652.4	Apol7d	ENSMUST00000125934.1	protein_coding	+
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000026193.8	Fn1	ENSMUST00000087254.5	protein_coding	-
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000026193.8	Fn1	ENSMUST00000055226.6	protein_coding	-
chr1_71699121_71700586	chr1	71699121	71700586	ENSMUSG00000026193.8	Fn1	ENSMUST00000097700.3	protein_coding	-
chr1_72256969_72259254	chr1	72256969	72259254	ENSMUSG00000039395.7	Mreg	ENSMUST00000048860.7	protein_coding	-
chr1_72271793_72273782	chr1	72271793	72273782	ENSMUSG00000075752.1	U2	ENSMUST00000101806.1	snRNA	+
chr1_72282581_72284342	chr1	72282581	72284342	ENSMUSG00000085769.1	D230017M19Rik	ENSMUST00000147711.1	lincRNA	+
chr1_72282581_72284342	chr1	72282581	72284342	ENSMUSG00000093247.1	AC120136.2	ENSMUST00000175506.1	snRNA	+
chr1_72290133_72291525	chr1	72290133	72291525	ENSMUSG00000085769.1	D230017M19Rik	ENSMUST00000123654.1	lincRNA	+
chr1_72290133_72291525	chr1	72290133	72291525	ENSMUSG00000093111.1	AC120136.1	ENSMUST00000175370.1	snRNA	+
chr1_72300731_72302684	chr1	72300731	72302684	ENSMUSG00000093333.1	AC120136.3	ENSMUST00000175592.1	snRNA	+
chr1_72330440_72331690	chr1	72330440	72331690	ENSMUSG00000026188.5	Tmem169	ENSMUST00000027380.5	protein_coding	+
chr1_72330440_72331690	chr1	72330440	72331690	ENSMUSG00000026188.5	Tmem169	ENSMUST00000141783.1	protein_coding	+
chr1_72330440_72331690	chr1	72330440	72331690	ENSMUSG00000026189.7	Pecr	ENSMUST00000097698.4	protein_coding	-
chr1_72330440_72331690	chr1	72330440	72331690	ENSMUSG00000026189.7	Pecr	ENSMUST00000027381.6	protein_coding	-
chr1_72330440_72331690	chr1	72330440	72331690	ENSMUSG00000026189.7	Pecr	ENSMUST00000129458.1	nonsense_mediated_decay	-
chr1_72330440_72331690	chr1	72330440	72331690	ENSMUSG00000026189.7	Pecr	ENSMUST00000134840.1	nonsense_mediated_decay	-
chr1_72353174_72354645	chr1	72353174	72354645	ENSMUSG00000026187.8	Xrcc5	ENSMUST00000027379.8	protein_coding	+
chr1_72582145_72584178	chr1	72582145	72584178	ENSMUSG00000039372.5	March4	ENSMUST00000047786.5	protein_coding	-
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000047615.8	protein_coding	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000152814.1	retained_intron	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000156797.1	retained_intron	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000136498.1	protein_coding	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000145868.1	protein_coding	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000133123.1	protein_coding	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000132336.1	protein_coding	+
chr1_72629220_72630558	chr1	72629220	72630558	ENSMUSG00000039354.9	Smarcal1	ENSMUST00000152225.1	nonsense_mediated_decay	+
chr1_72747023_72747283	chr1	72747023	72747283	ENSMUSG00000039342.4	Ankar	ENSMUST00000053499.4	protein_coding	-
chr1_72757281_72758654	chr1	72757281	72758654	ENSMUSG00000046330.9	Rpl37a	ENSMUST00000059980.9	protein_coding	+
chr1_72870349_72871918	chr1	72870349	72871918	ENSMUSG00000039323.11	Igfbp2	ENSMUST00000047328.4	protein_coding	+
chr1_72870349_72871918	chr1	72870349	72871918	ENSMUSG00000039323.11	Igfbp2	ENSMUST00000080287.7	protein_coding	+
chr1_72870349_72871918	chr1	72870349	72871918	ENSMUSG00000039323.11	Igfbp2	ENSMUST00000120564.1	protein_coding	+
chr1_72871987_72872316	chr1	72871987	72872316	ENSMUSG00000039323.11	Igfbp2	ENSMUST00000120564.1	protein_coding	+
chr1_72919995_72920851	chr1	72919995	72920851	ENSMUSG00000026185.8	Igfbp5	ENSMUST00000137339.1	processed_transcript	-
chr1_72921355_72921771	chr1	72921355	72921771	ENSMUSG00000026185.8	Igfbp5	ENSMUST00000027377.8	protein_coding	-
chr1_73062410_73062634	chr1	73062410	73062634	ENSMUSG00000026182.5	Tnp1	ENSMUST00000027374.5	protein_coding	-
chr1_73974984_73975298	chr1	73974984	73975298	ENSMUSG00000055322.7	Tns1	ENSMUST00000068832.7	protein_coding	-
chr1_74044794_74046012	chr1	74044794	74046012	ENSMUSG00000055322.7	Tns1	ENSMUST00000050681.4	protein_coding	-
chr1_74170539_74172232	chr1	74170539	74172232	ENSMUSG00000061815.5	Rufy4	ENSMUST00000080167.4	protein_coding	+
chr1_74170539_74172232	chr1	74170539	74172232	ENSMUSG00000061815.5	Rufy4	ENSMUST00000127134.1	protein_coding	+
chr1_74170539_74172232	chr1	74170539	74172232	ENSMUSG00000055322.7	Tns1	ENSMUST00000169786.1	protein_coding	-
chr1_74170539_74172232	chr1	74170539	74172232	ENSMUSG00000055322.7	Tns1	ENSMUST00000171899.1	protein_coding	-
chr1_74241034_74241391	chr1	74241034	74241391	ENSMUSG00000048480.4	Cxcr1	ENSMUST00000053389.4	protein_coding	-
chr1_74252273_74253525	chr1	74252273	74253525	ENSMUSG00000087820.1	Mir1928	ENSMUST00000157195.1	miRNA	-
chr1_74282424_74283926	chr1	74282424	74283926	ENSMUSG00000006304.8	Arpc2	ENSMUST00000113820.2	protein_coding	+
chr1_74282424_74283926	chr1	74282424	74283926	ENSMUSG00000006304.8	Arpc2	ENSMUST00000006467.7	protein_coding	+
chr1_74282424_74283926	chr1	74282424	74283926	ENSMUSG00000006304.8	Arpc2	ENSMUST00000113819.1	protein_coding	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000026179.8	Pnkd	ENSMUST00000113805.1	protein_coding	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000026179.8	Pnkd	ENSMUST00000027370.6	protein_coding	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000026179.8	Pnkd	ENSMUST00000129219.1	retained_intron	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000026179.8	Pnkd	ENSMUST00000138620.1	processed_transcript	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000026179.8	Pnkd	ENSMUST00000087226.4	protein_coding	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000026179.8	Pnkd	ENSMUST00000152492.1	processed_transcript	+
chr1_74330724_74332321	chr1	74330724	74332321	ENSMUSG00000006299.6	Aamp	ENSMUST00000006462.6	protein_coding	-
chr1_74341667_74343339	chr1	74341667	74343339	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000152603.1	retained_intron	-
chr1_74350039_74351375	chr1	74350039	74351375	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000141560.1	protein_coding	-
chr1_74350039_74351375	chr1	74350039	74351375	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000154859.1	processed_transcript	-
chr1_74350039_74351375	chr1	74350039	74351375	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000113796.1	protein_coding	-
chr1_74350039_74351375	chr1	74350039	74351375	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000135384.1	retained_intron	-
chr1_74350039_74351375	chr1	74350039	74351375	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000113791.3	protein_coding	-
chr1_74350039_74351375	chr1	74350039	74351375	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000016309.9	protein_coding	-
chr1_74352020_74352301	chr1	74352020	74352301	ENSMUSG00000006301.10	Tmbim1	ENSMUST00000130763.1	protein_coding	-
chr1_74378456_74380055	chr1	74378456	74380055	ENSMUSG00000026179.8	Pnkd	ENSMUST00000087225.5	protein_coding	+
chr1_74408279_74409751	chr1	74408279	74409751	ENSMUSG00000073650.2	Gm216	ENSMUST00000097697.1	protein_coding	+
chr1_74408279_74409751	chr1	74408279	74409751	ENSMUSG00000073650.2	Gm216	ENSMUST00000128445.1	protein_coding	+
chr1_74421467_74422295	chr1	74421467	74422295	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000027368.5	protein_coding	+
chr1_74421467_74422295	chr1	74421467	74422295	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000147233.1	retained_intron	+
chr1_74421467_74422295	chr1	74421467	74422295	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000131511.1	retained_intron	+
chr1_74421467_74422295	chr1	74421467	74422295	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000136786.1	processed_transcript	+
chr1_74421467_74422295	chr1	74421467	74422295	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000135137.1	processed_transcript	+
chr1_74422887_74423265	chr1	74422887	74423265	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000155865.1	processed_transcript	+
chr1_74428035_74428591	chr1	74428035	74428591	ENSMUSG00000026177.5	Slc11a1	ENSMUST00000133896.1	processed_transcript	+
chr1_74437602_74439590	chr1	74437602	74439590	ENSMUSG00000026176.7	Ctdsp1	ENSMUST00000027367.7	protein_coding	+
chr1_74437602_74439590	chr1	74437602	74439590	ENSMUSG00000026176.7	Ctdsp1	ENSMUST00000141175.1	retained_intron	+
chr1_74437602_74439590	chr1	74437602	74439590	ENSMUSG00000026176.7	Ctdsp1	ENSMUST00000152659.1	protein_coding	+
chr1_74455014_74456484	chr1	74455014	74456484	ENSMUSG00000026175.6	Vil1	ENSMUST00000027366.6	protein_coding	+
chr1_74465375_74466317	chr1	74465375	74466317	ENSMUSG00000026175.6	Vil1	ENSMUST00000159749.1	protein_coding	+
chr1_74551963_74553542	chr1	74551963	74553542	ENSMUSG00000026174.8	Rqcd1	ENSMUST00000087215.5	protein_coding	+
chr1_74551963_74553542	chr1	74551963	74553542	ENSMUSG00000026174.8	Rqcd1	ENSMUST00000137100.1	processed_transcript	+
chr1_74588702_74590170	chr1	74588702	74590170	ENSMUSG00000026173.9	Plcd4	ENSMUST00000141412.1	nonsense_mediated_decay	+
chr1_74588702_74590170	chr1	74588702	74590170	ENSMUSG00000026173.9	Plcd4	ENSMUST00000113749.1	protein_coding	+
chr1_74588702_74590170	chr1	74588702	74590170	ENSMUSG00000026173.9	Plcd4	ENSMUST00000067916.6	protein_coding	+
chr1_74588702_74590170	chr1	74588702	74590170	ENSMUSG00000026173.9	Plcd4	ENSMUST00000113747.1	protein_coding	+
chr1_74588702_74590170	chr1	74588702	74590170	ENSMUSG00000026173.9	Plcd4	ENSMUST00000113745.1	protein_coding	+
chr1_74588702_74590170	chr1	74588702	74590170	ENSMUSG00000026173.9	Plcd4	ENSMUST00000113750.1	protein_coding	+
chr1_74590718_74591074	chr1	74590718	74591074	ENSMUSG00000026173.9	Plcd4	ENSMUST00000027362.7	protein_coding	+
chr1_74590718_74591074	chr1	74590718	74591074	ENSMUSG00000026173.9	Plcd4	ENSMUST00000152707.1	nonsense_mediated_decay	+
chr1_74590718_74591074	chr1	74590718	74591074	ENSMUSG00000033364.6	Usp37	ENSMUST00000044260.4	protein_coding	-
chr1_74590718_74591074	chr1	74590718	74591074	ENSMUSG00000033364.6	Usp37	ENSMUST00000055335.5	protein_coding	-
chr1_74631510_74632042	chr1	74631510	74632042	ENSMUSG00000026135.10	Zfp142	ENSMUST00000127921.1	nonsense_mediated_decay	-
chr1_74631510_74632042	chr1	74631510	74632042	ENSMUSG00000026135.10	Zfp142	ENSMUST00000113739.2	protein_coding	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026172.6	Bcs1l	ENSMUST00000113733.3	protein_coding	+
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026172.6	Bcs1l	ENSMUST00000027358.4	protein_coding	+
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026172.6	Bcs1l	ENSMUST00000113732.1	protein_coding	+
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000147011.1	processed_transcript	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000093155.1	AC117610.1	ENSMUST00000175414.1	miRNA	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000130112.1	retained_intron	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000136865.1	retained_intron	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000156613.1	nonsense_mediated_decay	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000066986.6	protein_coding	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000165312.1	protein_coding	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000027315.7	protein_coding	-
chr1_74633693_74635243	chr1	74633693	74635243	ENSMUSG00000026135.10	Zfp142	ENSMUST00000113737.1	protein_coding	-
chr1_74641083_74641444	chr1	74641083	74641444	ENSMUSG00000026171.6	Rnf25	ENSMUST00000149649.1	processed_transcript	-
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000087183.4	protein_coding	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000042446.7	protein_coding	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000113699.1	protein_coding	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000145673.1	retained_intron	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000148456.1	protein_coding	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000113694.1	protein_coding	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000033276.11	Stk36	ENSMUST00000087186.4	protein_coding	+
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000026171.6	Rnf25	ENSMUST00000132081.1	protein_coding	-
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000026171.6	Rnf25	ENSMUST00000128491.1	retained_intron	-
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000026171.6	Rnf25	ENSMUST00000136078.1	protein_coding	-
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000026171.6	Rnf25	ENSMUST00000113721.1	protein_coding	-
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000026171.6	Rnf25	ENSMUST00000027357.5	protein_coding	-
chr1_74647421_74648521	chr1	74647421	74648521	ENSMUSG00000026171.6	Rnf25	ENSMUST00000135140.1	nonsense_mediated_decay	-
chr1_74672571_74673065	chr1	74672571	74673065	ENSMUSG00000033276.11	Stk36	ENSMUST00000123154.1	processed_transcript	+
chr1_74707787_74709351	chr1	74707787	74709351	ENSMUSG00000033257.8	Ttll4	ENSMUST00000042125.8	protein_coding	+
chr1_74707787_74709351	chr1	74707787	74709351	ENSMUSG00000033257.8	Ttll4	ENSMUST00000141119.1	protein_coding	+
chr1_74707787_74709351	chr1	74707787	74709351	ENSMUSG00000033257.8	Ttll4	ENSMUST00000153636.1	retained_intron	+
chr1_74707787_74709351	chr1	74707787	74709351	ENSMUSG00000033257.8	Ttll4	ENSMUST00000129890.1	protein_coding	+
chr1_74742459_74742754	chr1	74742459	74742754	ENSMUSG00000033257.8	Ttll4	ENSMUST00000143790.1	processed_transcript	+
chr1_74758680_74761088	chr1	74758680	74761088	ENSMUSG00000026170.5	Cyp27a1	ENSMUST00000027356.5	protein_coding	+
chr1_74795131_74796311	chr1	74795131	74796311	ENSMUSG00000006542.7	Prkag3	ENSMUST00000159728.1	nonsense_mediated_decay	-
chr1_74795131_74796311	chr1	74795131	74796311	ENSMUSG00000006542.7	Prkag3	ENSMUST00000162093.1	nonsense_mediated_decay	-
chr1_74795131_74796311	chr1	74795131	74796311	ENSMUSG00000006542.7	Prkag3	ENSMUST00000113672.2	protein_coding	-
chr1_74795131_74796311	chr1	74795131	74796311	ENSMUSG00000006542.7	Prkag3	ENSMUST00000081636.6	protein_coding	-
chr1_74795131_74796311	chr1	74795131	74796311	ENSMUSG00000006542.7	Prkag3	ENSMUST00000160732.1	nonsense_mediated_decay	-
chr1_74818484_74820187	chr1	74818484	74820187	ENSMUSG00000033227.6	Wnt6	ENSMUST00000006716.6	protein_coding	+
chr1_74837752_74838456	chr1	74837752	74838456	ENSMUSG00000026167.8	Wnt10a	ENSMUST00000006718.8	protein_coding	+
chr1_74896472_74897600	chr1	74896472	74897600	ENSMUSG00000089964.1	Gm16582	ENSMUST00000159627.1	processed_transcript	+
chr1_74900861_74902111	chr1	74900861	74902111	ENSMUSG00000090071.2	Cdk5r2	ENSMUST00000160379.1	protein_coding	+
chr1_74900861_74902111	chr1	74900861	74902111	ENSMUSG00000090071.2	Cdk5r2	ENSMUST00000041620.3	protein_coding	+
chr1_74931207_74931487	chr1	74931207	74931487	ENSMUSG00000055197.4	Fev	ENSMUST00000162938.1	retained_intron	-
chr1_74939400_74940389	chr1	74939400	74940389	ENSMUSG00000006546.2	Cryba2	ENSMUST00000133833.1	processed_transcript	-
chr1_74939400_74940389	chr1	74939400	74940389	ENSMUSG00000006546.2	Cryba2	ENSMUST00000006721.2	protein_coding	-
chr1_74946928_74947227	chr1	74946928	74947227	ENSMUSG00000065616.2	Mir375	ENSMUST00000083682.2	miRNA	-
chr1_74947290_74948610	chr1	74947290	74948610	ENSMUSG00000065616.2	Mir375	ENSMUST00000083682.2	miRNA	-
chr1_74981547_74983520	chr1	74981547	74983520	ENSMUSG00000047021.8	Ccdc108	ENSMUST00000130489.1	retained_intron	-
chr1_74981547_74983520	chr1	74981547	74983520	ENSMUSG00000047021.8	Ccdc108	ENSMUST00000139950.1	retained_intron	-
chr1_74981547_74983520	chr1	74981547	74983520	ENSMUSG00000047021.8	Ccdc108	ENSMUST00000094844.3	protein_coding	-
chr1_74997864_74998696	chr1	74997864	74998696	ENSMUSG00000006538.8	Ihh	ENSMUST00000164097.1	protein_coding	-
chr1_74997864_74998696	chr1	74997864	74998696	ENSMUSG00000006538.8	Ihh	ENSMUST00000006713.6	protein_coding	-
chr1_75129907_75130838	chr1	75129907	75130838	ENSMUSG00000026205.6	Slc23a3	ENSMUST00000027405.4	protein_coding	-
chr1_75129907_75130838	chr1	75129907	75130838	ENSMUSG00000026205.6	Slc23a3	ENSMUST00000094841.3	protein_coding	-
chr1_75137497_75140072	chr1	75137497	75140072	ENSMUSG00000049339.9	Fam134a	ENSMUST00000097694.4	protein_coding	+
chr1_75137497_75140072	chr1	75137497	75140072	ENSMUSG00000049339.9	Fam134a	ENSMUST00000060113.8	protein_coding	+
chr1_75137497_75140072	chr1	75137497	75140072	ENSMUSG00000033159.7	1810031K17Rik	ENSMUST00000097695.4	protein_coding	-
chr1_75137497_75140072	chr1	75137497	75140072	ENSMUSG00000033159.7	1810031K17Rik	ENSMUST00000041213.5	protein_coding	-
chr1_75137497_75140072	chr1	75137497	75140072	ENSMUSG00000033159.7	1810031K17Rik	ENSMUST00000168720.1	protein_coding	-
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000162768.1	protein_coding	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000161106.1	retained_intron	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000160439.1	protein_coding	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000027394.5	protein_coding	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000161657.1	retained_intron	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000160224.1	nonsense_mediated_decay	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000160903.1	retained_intron	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000160033.1	retained_intron	+
chr1_75164663_75166555	chr1	75164663	75166555	ENSMUSG00000026197.5	Zfand2b	ENSMUST00000160282.1	retained_intron	+
chr1_75175781_75177255	chr1	75175781	75177255	ENSMUSG00000026198.9	Abcb6	ENSMUST00000161103.1	retained_intron	-
chr1_75175781_75177255	chr1	75175781	75177255	ENSMUSG00000026198.9	Abcb6	ENSMUST00000159219.1	retained_intron	-
chr1_75175781_75177255	chr1	75175781	75177255	ENSMUSG00000026198.9	Abcb6	ENSMUST00000160081.1	retained_intron	-
chr1_75175781_75177255	chr1	75175781	75177255	ENSMUSG00000026198.9	Abcb6	ENSMUST00000027396.8	protein_coding	-
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000073236.6	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000151887.1	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000134378.1	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000125384.1	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000152233.1	antisense	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000134233.1	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000131788.1	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000145459.1	antisense	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000026199.10	Ankzf1	ENSMUST00000127625.2	retained_intron	+
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000033124.8	Atg9a	ENSMUST00000165703.1	protein_coding	-
chr1_75187962_75189459	chr1	75187962	75189459	ENSMUSG00000033124.8	Atg9a	ENSMUST00000040689.8	protein_coding	-
chr1_75197664_75198352	chr1	75197664	75198352	ENSMUSG00000026200.7	Glb1l	ENSMUST00000153584.1	retained_intron	-
chr1_75197664_75198352	chr1	75197664	75198352	ENSMUSG00000026200.7	Glb1l	ENSMUST00000143193.1	retained_intron	-
chr1_75205477_75206360	chr1	75205477	75206360	ENSMUSG00000026200.7	Glb1l	ENSMUST00000132507.1	retained_intron	-
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026201.6	Stk16	ENSMUST00000027401.4	protein_coding	+
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026201.6	Stk16	ENSMUST00000139627.1	retained_intron	+
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026201.6	Stk16	ENSMUST00000144355.1	protein_coding	+
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026201.6	Stk16	ENSMUST00000123825.1	protein_coding	+
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026201.6	Stk16	ENSMUST00000135484.1	retained_intron	+
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026201.6	Stk16	ENSMUST00000142052.1	nonsense_mediated_decay	+
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026200.7	Glb1l	ENSMUST00000131408.1	retained_intron	-
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026200.7	Glb1l	ENSMUST00000113623.1	protein_coding	-
chr1_75206849_75207931	chr1	75206849	75207931	ENSMUSG00000026200.7	Glb1l	ENSMUST00000155716.1	nonsense_mediated_decay	-
chr1_75209169_75209438	chr1	75209169	75209438	ENSMUSG00000026201.6	Stk16	ENSMUST00000131738.1	processed_transcript	+
chr1_75209169_75209438	chr1	75209169	75209438	ENSMUSG00000026201.6	Stk16	ENSMUST00000156012.1	retained_intron	+
chr1_75209754_75210090	chr1	75209754	75210090	ENSMUSG00000026201.6	Stk16	ENSMUST00000156012.1	retained_intron	+
chr1_75213283_75216523	chr1	75213283	75216523	ENSMUSG00000026202.7	Tuba4a	ENSMUST00000079464.6	protein_coding	-
chr1_75232422_75234083	chr1	75232422	75234083	ENSMUSG00000026203.9	Dnajb2	ENSMUST00000169680.1	protein_coding	+
chr1_75232422_75234083	chr1	75232422	75234083	ENSMUSG00000026203.9	Dnajb2	ENSMUST00000082158.6	protein_coding	+
chr1_75232422_75234083	chr1	75232422	75234083	ENSMUSG00000026203.9	Dnajb2	ENSMUST00000055223.7	protein_coding	+
chr1_75232422_75234083	chr1	75232422	75234083	ENSMUSG00000026203.9	Dnajb2	ENSMUST00000116582.2	protein_coding	+
chr1_75259577_75261780	chr1	75259577	75261780	ENSMUSG00000026204.8	Ptprn	ENSMUST00000164451.1	protein_coding	-
chr1_75259577_75261780	chr1	75259577	75261780	ENSMUSG00000026204.8	Ptprn	ENSMUST00000027404.5	protein_coding	-
chr1_75273794_75275381	chr1	75273794	75275381	ENSMUSG00000033061.8	Resp18	ENSMUST00000067014.6	protein_coding	-
chr1_75273794_75275381	chr1	75273794	75275381	ENSMUSG00000033061.8	Resp18	ENSMUST00000039534.4	protein_coding	-
chr1_75313242_75314971	chr1	75313242	75314971	ENSMUSG00000026209.8	Dnpep	ENSMUST00000113605.3	protein_coding	-
chr1_75313242_75314971	chr1	75313242	75314971	ENSMUSG00000026209.8	Dnpep	ENSMUST00000171858.1	protein_coding	-
chr1_75313242_75314971	chr1	75313242	75314971	ENSMUSG00000026209.8	Dnpep	ENSMUST00000066668.7	protein_coding	-
chr1_75356620_75357433	chr1	75356620	75357433	ENSMUSG00000026208.9	Des	ENSMUST00000027409.9	protein_coding	+
chr1_75358323_75358799	chr1	75358323	75358799	ENSMUSG00000026208.9	Des	ENSMUST00000125948.1	retained_intron	+
chr1_75366018_75367351	chr1	75366018	75367351	ENSMUSG00000085653.1	Gm15179	ENSMUST00000130095.1	antisense	-
chr1_75371159_75372015	chr1	75371159	75372015	ENSMUSG00000026207.9	Speg	ENSMUST00000087122.5	protein_coding	+
chr1_75371159_75372015	chr1	75371159	75372015	ENSMUSG00000085653.1	Gm15179	ENSMUST00000152799.1	antisense	-
chr1_75377258_75378770	chr1	75377258	75378770	ENSMUSG00000026207.9	Speg	ENSMUST00000113590.1	protein_coding	+
chr1_75377258_75378770	chr1	75377258	75378770	ENSMUSG00000026207.9	Speg	ENSMUST00000148515.1	protein_coding	+
chr1_75377258_75378770	chr1	75377258	75378770	ENSMUSG00000026207.9	Speg	ENSMUST00000125306.1	nonsense_mediated_decay	+
chr1_75377258_75378770	chr1	75377258	75378770	ENSMUSG00000026207.9	Speg	ENSMUST00000038230.7	protein_coding	+
chr1_75378909_75379702	chr1	75378909	75379702	ENSMUSG00000026207.9	Speg	ENSMUST00000125306.1	nonsense_mediated_decay	+
chr1_75378909_75379702	chr1	75378909	75379702	ENSMUSG00000026207.9	Speg	ENSMUST00000038230.7	protein_coding	+
chr1_75380798_75381378	chr1	75380798	75381378	ENSMUSG00000026207.9	Speg	ENSMUST00000125118.1	retained_intron	+
chr1_75380798_75381378	chr1	75380798	75381378	ENSMUSG00000026207.9	Speg	ENSMUST00000132228.1	nonsense_mediated_decay	+
chr1_75381743_75382165	chr1	75381743	75382165	ENSMUSG00000026207.9	Speg	ENSMUST00000132222.1	processed_transcript	+
chr1_75381743_75382165	chr1	75381743	75382165	ENSMUSG00000026207.9	Speg	ENSMUST00000137868.1	processed_transcript	+
chr1_75395166_75397562	chr1	75395166	75397562	ENSMUSG00000026207.9	Speg	ENSMUST00000113589.1	protein_coding	+
chr1_75395166_75397562	chr1	75395166	75397562	ENSMUSG00000026207.9	Speg	ENSMUST00000113588.1	protein_coding	+
chr1_75395166_75397562	chr1	75395166	75397562	ENSMUSG00000026207.9	Speg	ENSMUST00000113587.1	protein_coding	+
chr1_75395166_75397562	chr1	75395166	75397562	ENSMUSG00000026207.9	Speg	ENSMUST00000122266.1	protein_coding	+
chr1_75419447_75420152	chr1	75419447	75420152	ENSMUSG00000026207.9	Speg	ENSMUST00000143679.1	retained_intron	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000037796.7	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000113584.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000145166.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000143730.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000133418.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000144874.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000140287.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000131545.1	protein_coding	+
chr1_75432061_75433207	chr1	75432061	75433207	ENSMUSG00000033021.10	Gmppa	ENSMUST00000141124.1	protein_coding	+
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000051703.8	Tmem198	ENSMUST00000113575.2	protein_coding	+
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000051703.8	Tmem198	ENSMUST00000148980.1	protein_coding	+
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000051703.8	Tmem198	ENSMUST00000050899.6	protein_coding	+
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000032997.10	Chpf	ENSMUST00000124042.1	nonsense_mediated_decay	-
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000032997.10	Chpf	ENSMUST00000138683.1	nonsense_mediated_decay	-
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000032997.10	Chpf	ENSMUST00000143496.1	retained_intron	-
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000032997.10	Chpf	ENSMUST00000094818.2	protein_coding	-
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000032997.10	Chpf	ENSMUST00000143020.1	nonsense_mediated_decay	-
chr1_75475134_75476802	chr1	75475134	75476802	ENSMUSG00000032997.10	Chpf	ENSMUST00000079205.7	protein_coding	-
chr1_75482766_75484948	chr1	75482766	75484948	ENSMUSG00000026211.10	Obsl1	ENSMUST00000156705.1	retained_intron	-
chr1_75482766_75484948	chr1	75482766	75484948	ENSMUSG00000026211.10	Obsl1	ENSMUST00000154636.1	retained_intron	-
chr1_75482766_75484948	chr1	75482766	75484948	ENSMUSG00000026211.10	Obsl1	ENSMUST00000156499.1	retained_intron	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000032968.4	Inha	ENSMUST00000037330.4	protein_coding	+
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000145306.1	retained_intron	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000129403.1	retained_intron	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000113565.2	protein_coding	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000027412.7	protein_coding	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000155084.1	protein_coding	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000064469.7	protein_coding	-
chr1_75501174_75503511	chr1	75501174	75503511	ENSMUSG00000026211.10	Obsl1	ENSMUST00000113567.2	protein_coding	-
chr1_75517579_75518848	chr1	75517579	75518848	ENSMUSG00000026213.9	Stk11ip	ENSMUST00000027414.9	protein_coding	+
chr1_75517579_75518848	chr1	75517579	75518848	ENSMUSG00000026213.9	Stk11ip	ENSMUST00000113553.1	protein_coding	+
chr1_75517579_75518848	chr1	75517579	75518848	ENSMUSG00000026213.9	Stk11ip	ENSMUST00000140963.1	retained_intron	+
chr1_75517579_75518848	chr1	75517579	75518848	ENSMUSG00000026213.9	Stk11ip	ENSMUST00000129652.1	retained_intron	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000124341.1	protein_coding	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000113545.2	protein_coding	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000129703.1	retained_intron	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000150142.1	protein_coding	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000027415.5	nonsense_mediated_decay	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000145516.1	retained_intron	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000138814.1	protein_coding	+
chr1_75542265_75543588	chr1	75542265	75543588	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000132612.1	retained_intron	+
chr1_75545414_75546939	chr1	75545414	75546939	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000154101.1	protein_coding	+
chr1_75545414_75546939	chr1	75545414	75546939	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000142257.1	retained_intron	+
chr1_75545414_75546939	chr1	75545414	75546939	ENSMUSG00000006576.9	Slc4a3	ENSMUST00000006751.7	protein_coding	+
chr1_77510000_77513489	chr1	77510000	77513489	ENSMUSG00000026235.7	Epha4	ENSMUST00000027451.6	protein_coding	-
chr1_77510000_77513489	chr1	77510000	77513489	ENSMUSG00000026235.7	Epha4	ENSMUST00000113540.1	protein_coding	-
chr1_78192817_78193339	chr1	78192817	78193339	ENSMUSG00000004872.9	Pax3	ENSMUST00000004994.9	protein_coding	-
chr1_78193524_78193932	chr1	78193524	78193932	ENSMUSG00000004872.9	Pax3	ENSMUST00000172555.1	processed_transcript	-
chr1_78193524_78193932	chr1	78193524	78193932	ENSMUSG00000004872.9	Pax3	ENSMUST00000087086.6	protein_coding	-
chr1_78193524_78193932	chr1	78193524	78193932	ENSMUSG00000004872.9	Pax3	ENSMUST00000004994.9	protein_coding	-
chr1_78305912_78308435	chr1	78305912	78308435	ENSMUSG00000032908.8	Sgpp2	ENSMUST00000036172.8	protein_coding	+
chr1_78484897_78486312	chr1	78484897	78486312	ENSMUSG00000026245.9	Farsb	ENSMUST00000068333.7	protein_coding	-
chr1_78484897_78486312	chr1	78484897	78486312	ENSMUSG00000026245.9	Farsb	ENSMUST00000171087.1	protein_coding	-
chr1_78484897_78486312	chr1	78484897	78486312	ENSMUSG00000026245.9	Farsb	ENSMUST00000170217.1	protein_coding	-
chr1_78506926_78507907	chr1	78506926	78507907	ENSMUSG00000012187.7	Mogat1	ENSMUST00000134947.1	protein_coding	+
chr1_78506926_78507907	chr1	78506926	78507907	ENSMUSG00000012187.7	Mogat1	ENSMUST00000149732.1	protein_coding	+
chr1_78506926_78507907	chr1	78506926	78507907	ENSMUSG00000012187.7	Mogat1	ENSMUST00000113524.1	protein_coding	+
chr1_78507998_78508771	chr1	78507998	78508771	ENSMUSG00000012187.7	Mogat1	ENSMUST00000152111.1	protein_coding	+
chr1_78507998_78508771	chr1	78507998	78508771	ENSMUSG00000012187.7	Mogat1	ENSMUST00000012331.6	protein_coding	+
chr1_78507998_78508771	chr1	78507998	78508771	ENSMUSG00000090486.1	BC035947	ENSMUST00000170511.1	protein_coding	-
chr1_78533392_78534781	chr1	78533392	78534781	ENSMUSG00000012187.7	Mogat1	ENSMUST00000125458.1	processed_transcript	+
chr1_78653739_78655943	chr1	78653739	78655943	ENSMUSG00000032883.9	Acsl3	ENSMUST00000035779.8	protein_coding	+
chr1_78653739_78655943	chr1	78653739	78655943	ENSMUSG00000032883.9	Acsl3	ENSMUST00000134566.1	protein_coding	+
chr1_78653739_78655943	chr1	78653739	78655943	ENSMUSG00000032883.9	Acsl3	ENSMUST00000142704.1	protein_coding	+
chr1_78653739_78655943	chr1	78653739	78655943	ENSMUSG00000079470.2	Utp14b	ENSMUST00000053760.5	protein_coding	+
chr1_78653739_78655943	chr1	78653739	78655943	ENSMUSG00000079470.2	Utp14b	ENSMUST00000151622.1	protein_coding	+
chr1_78813249_78813604	chr1	78813249	78813604	ENSMUSG00000047330.6	Kcne4	ENSMUST00000113517.2	protein_coding	+
chr1_78813249_78813604	chr1	78813249	78813604	ENSMUSG00000047330.6	Kcne4	ENSMUST00000057262.6	protein_coding	+
chr1_79436185_79437137	chr1	79436185	79437137	ENSMUSG00000050711.5	Scg2	ENSMUST00000094810.2	protein_coding	-
chr1_79436185_79437137	chr1	79436185	79437137	ENSMUSG00000050711.5	Scg2	ENSMUST00000049972.4	protein_coding	-
chr1_79510277_79510541	chr1	79510277	79510541	ENSMUSG00000077782.1	SNORA17	ENSMUST00000104594.1	snoRNA	-
chr1_79667645_79669111	chr1	79667645	79669111	ENSMUSG00000054702.8	Ap1s3	ENSMUST00000160706.1	nonsense_mediated_decay	-
chr1_79667645_79669111	chr1	79667645	79669111	ENSMUSG00000054702.8	Ap1s3	ENSMUST00000159312.1	nonsense_mediated_decay	-
chr1_79667645_79669111	chr1	79667645	79669111	ENSMUSG00000054702.8	Ap1s3	ENSMUST00000162342.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000125641.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000048820.7	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000113510.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000113511.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000097685.3	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000113512.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000113513.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000113515.1	protein_coding	-
chr1_79757146_79759751	chr1	79757146	79759751	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000113514.1	protein_coding	-
chr1_79772223_79773183	chr1	79772223	79773183	ENSMUSG00000026248.8	Mrpl44	ENSMUST00000027464.8	protein_coding	+
chr1_79772223_79773183	chr1	79772223	79773183	ENSMUSG00000073643.4	Wdfy1	ENSMUST00000143368.1	protein_coding	-
chr1_79854305_79856477	chr1	79854305	79856477	ENSMUSG00000026249.4	Serpine2	ENSMUST00000153862.1	retained_intron	-
chr1_79854305_79856477	chr1	79854305	79856477	ENSMUSG00000026249.4	Serpine2	ENSMUST00000027467.4	protein_coding	-
chr1_80210085_80210834	chr1	80210085	80210834	ENSMUSG00000043230.2	Fam124b	ENSMUST00000058748.1	protein_coding	-
chr1_80214758_80215262	chr1	80214758	80215262	ENSMUSG00000043230.2	Fam124b	ENSMUST00000161427.1	processed_transcript	-
chr1_80335678_80338174	chr1	80335678	80338174	ENSMUSG00000004364.8	Cul3	ENSMUST00000167293.1	nonsense_mediated_decay	-
chr1_80335678_80338174	chr1	80335678	80338174	ENSMUSG00000004364.8	Cul3	ENSMUST00000170897.1	nonsense_mediated_decay	-
chr1_80335678_80338174	chr1	80335678	80338174	ENSMUSG00000004364.8	Cul3	ENSMUST00000164108.1	protein_coding	-
chr1_80335678_80338174	chr1	80335678	80338174	ENSMUSG00000004364.8	Cul3	ENSMUST00000163119.1	protein_coding	-
chr1_80661172_80661398	chr1	80661172	80661398	ENSMUSG00000038608.8	Dock10	ENSMUST00000057520.6	protein_coding	-
chr1_80661499_80662635	chr1	80661499	80662635	ENSMUSG00000038608.8	Dock10	ENSMUST00000164015.1	protein_coding	-
chr1_80753412_80755811	chr1	80753412	80755811	ENSMUSG00000038608.8	Dock10	ENSMUST00000097681.2	protein_coding	-
chr1_80753412_80755811	chr1	80753412	80755811	ENSMUSG00000038608.8	Dock10	ENSMUST00000166732.1	protein_coding	-
chr1_80753412_80755811	chr1	80753412	80755811	ENSMUSG00000038608.8	Dock10	ENSMUST00000169279.1	protein_coding	-
chr1_80753412_80755811	chr1	80753412	80755811	ENSMUSG00000038608.8	Dock10	ENSMUST00000077946.5	protein_coding	-
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000137862.1	protein_coding	+
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000123720.1	protein_coding	+
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000068297.5	protein_coding	+
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000068275.5	protein_coding	+
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000113494.2	protein_coding	+
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000113491.2	protein_coding	+
chr1_81072758_81074747	chr1	81072758	81074747	ENSMUSG00000054976.7	9430031J16Rik	ENSMUST00000123285.1	protein_coding	+
chr1_82286600_82288494	chr1	82286600	82288494	ENSMUSG00000055980.2	Irs1	ENSMUST00000069799.2	protein_coding	-
chr1_82312541_82313776	chr1	82312541	82313776	ENSMUSG00000026142.8	Rhbdd1	ENSMUST00000027322.7	protein_coding	+
chr1_82335408_82335730	chr1	82335408	82335730	ENSMUSG00000026142.8	Rhbdd1	ENSMUST00000140020.1	nonsense_mediated_decay	+
chr1_82335408_82335730	chr1	82335408	82335730	ENSMUSG00000026142.8	Rhbdd1	ENSMUST00000165975.1	protein_coding	+
chr1_82582680_82584225	chr1	82582680	82584225	ENSMUSG00000079465.2	Col4a3	ENSMUST00000141994.1	retained_intron	+
chr1_82582680_82584225	chr1	82582680	82584225	ENSMUSG00000079465.2	Col4a3	ENSMUST00000113457.2	protein_coding	+
chr1_82582680_82584225	chr1	82582680	82584225	ENSMUSG00000067158.7	Col4a4	ENSMUST00000135271.1	retained_intron	-
chr1_82582680_82584225	chr1	82582680	82584225	ENSMUSG00000067158.7	Col4a4	ENSMUST00000087050.5	protein_coding	-
chr1_82582680_82584225	chr1	82582680	82584225	ENSMUSG00000067158.7	Col4a4	ENSMUST00000087027.5	protein_coding	-
chr1_82630981_82631724	chr1	82630981	82631724	ENSMUSG00000065055.1	n-R5s213	ENSMUST00000083121.1	rRNA	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000078332.6	protein_coding	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000161572.1	nonsense_mediated_decay	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000076837.5	protein_coding	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000073025.5	protein_coding	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000161648.1	protein_coding	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000162056.1	retained_intron	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000160786.1	protein_coding	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000026150.7	Mff	ENSMUST00000162003.1	protein_coding	+
chr1_82720902_82722677	chr1	82720902	82722677	ENSMUSG00000085879.1	C430014B12Rik	ENSMUST00000150231.1	lincRNA	-
chr1_82731679_82732488	chr1	82731679	82732488	ENSMUSG00000026150.7	Mff	ENSMUST00000160744.1	protein_coding	+
chr1_82737871_82738671	chr1	82737871	82738671	ENSMUSG00000026150.7	Mff	ENSMUST00000160632.1	retained_intron	+
chr1_82764708_82765247	chr1	82764708	82765247	ENSMUSG00000026149.2	Tm4sf20	ENSMUST00000138787.1	processed_transcript	-
chr1_82764708_82765247	chr1	82764708	82765247	ENSMUSG00000026149.2	Tm4sf20	ENSMUST00000027331.2	protein_coding	-
chr1_82835416_82836792	chr1	82835416	82836792	ENSMUSG00000026159.6	Agfg1	ENSMUST00000113444.1	protein_coding	+
chr1_82835416_82836792	chr1	82835416	82836792	ENSMUSG00000026159.6	Agfg1	ENSMUST00000063380.4	protein_coding	+
chr1_82835416_82836792	chr1	82835416	82836792	ENSMUSG00000026159.6	Agfg1	ENSMUST00000113443.1	protein_coding	+
chr1_83034063_83035649	chr1	83034063	83035649	ENSMUSG00000038496.9	Slc19a3	ENSMUST00000164473.1	protein_coding	-
chr1_83034063_83035649	chr1	83034063	83035649	ENSMUSG00000038496.9	Slc19a3	ENSMUST00000045560.8	protein_coding	-
chr1_83113243_83114823	chr1	83113243	83114823	ENSMUSG00000026166.8	Ccl20	ENSMUST00000027351.6	protein_coding	+
chr1_83113243_83114823	chr1	83113243	83114823	ENSMUSG00000026166.8	Ccl20	ENSMUST00000113437.2	protein_coding	+
chr1_83156052_83156807	chr1	83156052	83156807	ENSMUSG00000053161.9	Wdr69	ENSMUST00000133079.1	retained_intron	+
chr1_83156052_83156807	chr1	83156052	83156807	ENSMUSG00000053161.9	Wdr69	ENSMUST00000113436.1	protein_coding	+
chr1_83156052_83156807	chr1	83156052	83156807	ENSMUSG00000053161.9	Wdr69	ENSMUST00000065436.3	protein_coding	+
chr1_83156052_83156807	chr1	83156052	83156807	ENSMUSG00000053161.9	Wdr69	ENSMUST00000113433.2	protein_coding	+
chr1_83156052_83156807	chr1	83156052	83156807	ENSMUSG00000053161.9	Wdr69	ENSMUST00000149342.1	nonsense_mediated_decay	+
chr1_83156052_83156807	chr1	83156052	83156807	ENSMUSG00000053161.9	Wdr69	ENSMUST00000065403.6	protein_coding	+
chr1_83402791_83405194	chr1	83402791	83405194	ENSMUSG00000026163.10	Sphkap	ENSMUST00000160567.1	retained_intron	-
chr1_83402791_83405194	chr1	83402791	83405194	ENSMUSG00000026163.10	Sphkap	ENSMUST00000160237.1	retained_intron	-
chr1_83402791_83405194	chr1	83402791	83405194	ENSMUSG00000026163.10	Sphkap	ENSMUST00000053075.8	retained_intron	-
chr1_83402791_83405194	chr1	83402791	83405194	ENSMUSG00000026163.10	Sphkap	ENSMUST00000160953.1	protein_coding	-
chr1_84280450_84282629	chr1	84280450	84282629	ENSMUSG00000045658.8	Pid1	ENSMUST00000168574.1	protein_coding	-
chr1_84280450_84282629	chr1	84280450	84282629	ENSMUSG00000045658.8	Pid1	ENSMUST00000051845.8	protein_coding	-
chr1_84691209_84693252	chr1	84691209	84693252	ENSMUSG00000093254.1	AC123882.1	ENSMUST00000175513.1	miRNA	+
chr1_84691209_84693252	chr1	84691209	84693252	ENSMUSG00000036766.6	Dner	ENSMUST00000049126.6	protein_coding	-
chr1_84835769_84837158	chr1	84835769	84837158	ENSMUSG00000026219.8	Trip12	ENSMUST00000027421.6	protein_coding	-
chr1_84835769_84837158	chr1	84835769	84837158	ENSMUSG00000073633.3	Fbxo36	ENSMUST00000097672.3	protein_coding	+
chr1_84835769_84837158	chr1	84835769	84837158	ENSMUSG00000073633.3	Fbxo36	ENSMUST00000143656.1	processed_transcript	+
chr1_84862745_84863190	chr1	84862745	84863190	ENSMUSG00000073633.3	Fbxo36	ENSMUST00000139562.1	processed_transcript	+
chr1_84930090_84932775	chr1	84930090	84932775	ENSMUSG00000026220.5	Slc16a14	ENSMUST00000027422.5	protein_coding	-
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000155094.1	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000141998.1	retained_intron	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000145440.1	nonsense_mediated_decay	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000147552.1	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000054279.8	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000153574.1	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000150967.1	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000066427.4	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000027424.6	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000097667.2	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000026222.9	Sp100	ENSMUST00000170314.1	protein_coding	+
chr1_87546438_87547085	chr1	87546438	87547085	ENSMUSG00000090246.1	Gm17017	ENSMUST00000161540.1	antisense	-
chr1_87599686_87600809	chr1	87599686	87600809	ENSMUSG00000026222.9	Sp100	ENSMUST00000141709.1	protein_coding	+
chr1_87631988_87633815	chr1	87631988	87633815	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000159325.1	processed_transcript	-
chr1_87631988_87633815	chr1	87631988	87633815	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000161453.1	processed_transcript	-
chr1_87631988_87633815	chr1	87631988	87633815	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000162038.1	nonsense_mediated_decay	-
chr1_87631988_87633815	chr1	87631988	87633815	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000086979.4	protein_coding	-
chr1_87631988_87633815	chr1	87631988	87633815	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000064788.7	protein_coding	-
chr1_87631988_87633815	chr1	87631988	87633815	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000159320.1	processed_transcript	-
chr1_87659832_87660473	chr1	87659832	87660473	ENSMUSG00000092640.1	AC161342.1	ENSMUST00000174899.1	miRNA	+
chr1_87675154_87676007	chr1	87675154	87676007	ENSMUSG00000052760.8	A630001G21Rik	ENSMUST00000159122.1	protein_coding	-
chr1_87689551_87691453	chr1	87689551	87691453	ENSMUSG00000036707.9	Cab39	ENSMUST00000113360.1	protein_coding	+
chr1_87689551_87691453	chr1	87689551	87691453	ENSMUSG00000036707.9	Cab39	ENSMUST00000126962.1	protein_coding	+
chr1_87689551_87691453	chr1	87689551	87691453	ENSMUSG00000036707.9	Cab39	ENSMUST00000130754.1	protein_coding	+
chr1_87689551_87691453	chr1	87689551	87691453	ENSMUSG00000036707.9	Cab39	ENSMUST00000097666.2	protein_coding	+
chr1_87790537_87791497	chr1	87790537	87791497	ENSMUSG00000026223.9	Itm2c	ENSMUST00000027425.9	protein_coding	+
chr1_87824452_87825959	chr1	87824452	87825959	ENSMUSG00000026224.5	4933407L21Rik	ENSMUST00000027426.4	protein_coding	+
chr1_87824452_87825959	chr1	87824452	87825959	ENSMUSG00000026224.5	4933407L21Rik	ENSMUST00000129392.1	protein_coding	+
chr1_87857301_87857940	chr1	87857301	87857940	ENSMUSG00000049608.7	Gpr55	ENSMUST00000086975.4	protein_coding	-
chr1_87914609_87915743	chr1	87914609	87915743	ENSMUSG00000026226.9	Spata3	ENSMUST00000149469.1	processed_transcript	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000052854.6	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000125083.1	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000130504.1	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000152501.1	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000113344.1	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000153247.2	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000159876.1	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000135440.1	protein_coding	+
chr1_87917681_87918934	chr1	87917681	87918934	ENSMUSG00000026226.9	Spata3	ENSMUST00000131151.2	protein_coding	+
chr1_87941494_87944229	chr1	87941494	87944229	ENSMUSG00000026227.5	2810459M11Rik	ENSMUST00000165824.1	protein_coding	+
chr1_87941494_87944229	chr1	87941494	87944229	ENSMUSG00000026227.5	2810459M11Rik	ENSMUST00000027429.4	protein_coding	+
chr1_87960588_87962049	chr1	87960588	87962049	ENSMUSG00000026229.10	Psmd1	ENSMUST00000143200.1	processed_transcript	+
chr1_87960588_87962049	chr1	87960588	87962049	ENSMUSG00000026229.10	Psmd1	ENSMUST00000147807.1	retained_intron	+
chr1_87960588_87962049	chr1	87960588	87962049	ENSMUSG00000026229.10	Psmd1	ENSMUST00000027432.8	protein_coding	+
chr1_87960588_87962049	chr1	87960588	87962049	ENSMUSG00000026229.10	Psmd1	ENSMUST00000139715.1	nonsense_mediated_decay	+
chr1_87960588_87962049	chr1	87960588	87962049	ENSMUSG00000026229.10	Psmd1	ENSMUST00000133480.1	retained_intron	+
chr1_87960588_87962049	chr1	87960588	87962049	ENSMUSG00000026229.10	Psmd1	ENSMUST00000127104.1	processed_transcript	+
chr1_88008168_88009132	chr1	88008168	88009132	ENSMUSG00000026228.6	Htr2b	ENSMUST00000027431.6	protein_coding	-
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000123618.1	retained_intron	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000155168.1	retained_intron	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000135973.1	retained_intron	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000153389.1	retained_intron	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000113309.2	protein_coding	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000134858.1	processed_transcript	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000027434.8	protein_coding	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000131412.1	protein_coding	+
chr1_88050502_88052005	chr1	88050502	88052005	ENSMUSG00000062590.7	Armc9	ENSMUST00000153653.1	retained_intron	+
chr1_88099042_88099889	chr1	88099042	88099889	ENSMUSG00000062590.7	Armc9	ENSMUST00000156675.1	protein_coding	+
chr1_88197441_88198628	chr1	88197441	88198628	ENSMUSG00000087538.1	Gm16341	ENSMUST00000126385.1	antisense	-
chr1_88199557_88201025	chr1	88199557	88201025	ENSMUSG00000079445.2	B3gnt7	ENSMUST00000113306.2	protein_coding	+
chr1_88255233_88256949	chr1	88255233	88256949	ENSMUSG00000073627.6	C130036L24Rik	ENSMUST00000127284.1	retained_intron	+
chr1_88255233_88256949	chr1	88255233	88256949	ENSMUSG00000073627.6	C130036L24Rik	ENSMUST00000137643.1	processed_transcript	+
chr1_88255233_88256949	chr1	88255233	88256949	ENSMUSG00000026234.6	Ncl	ENSMUST00000027438.6	protein_coding	-
chr1_88421504_88423489	chr1	88421504	88423489	ENSMUSG00000026238.8	Ptma	ENSMUST00000045897.8	protein_coding	+
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026240.6	Cops7b	ENSMUST00000121534.1	protein_coding	+
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026240.6	Cops7b	ENSMUST00000149542.1	protein_coding	+
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026239.8	Pde6d	ENSMUST00000146220.1	retained_intron	-
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026239.8	Pde6d	ENSMUST00000150653.1	processed_transcript	-
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026239.8	Pde6d	ENSMUST00000143674.1	nonsense_mediated_decay	-
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026239.8	Pde6d	ENSMUST00000027444.8	protein_coding	-
chr1_88478591_88479852	chr1	88478591	88479852	ENSMUSG00000026239.8	Pde6d	ENSMUST00000148683.1	retained_intron	-
chr1_88483348_88484127	chr1	88483348	88484127	ENSMUSG00000026240.6	Cops7b	ENSMUST00000027446.4	protein_coding	+
chr1_88483348_88484127	chr1	88483348	88484127	ENSMUSG00000026240.6	Cops7b	ENSMUST00000138280.1	nonsense_mediated_decay	+
chr1_88483348_88484127	chr1	88483348	88484127	ENSMUSG00000026240.6	Cops7b	ENSMUST00000122884.1	nonsense_mediated_decay	+
chr1_88491699_88493964	chr1	88491699	88493964	ENSMUSG00000026240.6	Cops7b	ENSMUST00000127219.1	processed_transcript	+
chr1_88565856_88567887	chr1	88565856	88567887	ENSMUSG00000026241.3	Nppc	ENSMUST00000027449.3	protein_coding	-
chr1_88599490_88601108	chr1	88599490	88601108	ENSMUSG00000053333.8	Dis3l2	ENSMUST00000168237.1	protein_coding	+
chr1_88599490_88601108	chr1	88599490	88601108	ENSMUSG00000053333.8	Dis3l2	ENSMUST00000065694.6	protein_coding	+
chr1_88599490_88601108	chr1	88599490	88601108	ENSMUSG00000053333.8	Dis3l2	ENSMUST00000065624.8	protein_coding	+
chr1_88599490_88601108	chr1	88599490	88601108	ENSMUSG00000053333.8	Dis3l2	ENSMUST00000166158.1	protein_coding	+
chr1_88998132_88998348	chr1	88998132	88998348	ENSMUSG00000079440.1	Alpi	ENSMUST00000113270.1	protein_coding	-
chr1_89052126_89053170	chr1	89052126	89053170	ENSMUSG00000026247.7	Ecel1	ENSMUST00000160810.1	protein_coding	-
chr1_89052126_89053170	chr1	89052126	89053170	ENSMUSG00000026247.7	Ecel1	ENSMUST00000161002.1	protein_coding	-
chr1_89082925_89083141	chr1	89082925	89083141	ENSMUSG00000036480.7	1700027L20Rik	ENSMUST00000132440.1	lincRNA	+
chr1_89082925_89083141	chr1	89082925	89083141	ENSMUSG00000036480.7	1700027L20Rik	ENSMUST00000044533.6	lincRNA	+
chr1_89083164_89084180	chr1	89083164	89084180	ENSMUSG00000036480.7	1700027L20Rik	ENSMUST00000132440.1	lincRNA	+
chr1_89083164_89084180	chr1	89083164	89084180	ENSMUSG00000036480.7	1700027L20Rik	ENSMUST00000044533.6	lincRNA	+
chr1_89086956_89087473	chr1	89086956	89087473	ENSMUSG00000026251.6	Chrnd	ENSMUST00000073252.2	protein_coding	+
chr1_89086956_89087473	chr1	89086956	89087473	ENSMUSG00000026251.6	Chrnd	ENSMUST00000086943.3	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000076362.5	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000113233.1	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000050876.7	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000113232.1	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000113235.1	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000113230.1	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000113236.3	protein_coding	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000123735.1	nonsense_mediated_decay	+
chr1_89109869_89111261	chr1	89109869	89111261	ENSMUSG00000026254.10	Eif4e2	ENSMUST00000113231.3	protein_coding	+
chr1_89160509_89161611	chr1	89160509	89161611	ENSMUSG00000026255.9	Efhd1	ENSMUST00000118687.1	protein_coding	+
chr1_89160509_89161611	chr1	89160509	89161611	ENSMUSG00000026255.9	Efhd1	ENSMUST00000027472.6	protein_coding	+
chr1_89160509_89161611	chr1	89160509	89161611	ENSMUSG00000089821.1	Gm16535	ENSMUST00000138844.2	antisense	-
chr1_89161769_89162190	chr1	89161769	89162190	ENSMUSG00000089821.1	Gm16535	ENSMUST00000138844.2	antisense	-
chr1_89205476_89205962	chr1	89205476	89205962	ENSMUSG00000026255.9	Efhd1	ENSMUST00000150831.1	processed_transcript	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000174846.1	processed_transcript	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000027475.8	protein_coding	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000172794.1	protein_coding	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000174583.1	processed_transcript	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000164992.2	protein_coding	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000173850.1	processed_transcript	+
chr1_89222855_89224626	chr1	89222855	89224626	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000173173.1	protein_coding	+
chr1_89283038_89283411	chr1	89283038	89283411	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000174535.1	processed_transcript	+
chr1_89283038_89283411	chr1	89283038	89283411	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000174334.1	protein_coding	+
chr1_89291000_89291583	chr1	89291000	89291583	ENSMUSG00000079436.3	Kcnj13	ENSMUST00000113212.3	protein_coding	-
chr1_89301198_89301857	chr1	89301198	89301857	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000173152.1	protein_coding	+
chr1_89301198_89301857	chr1	89301198	89301857	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000173148.1	nonsense_mediated_decay	+
chr1_89301198_89301857	chr1	89301198	89301857	ENSMUSG00000048000.8	Gigyf2	ENSMUST00000173663.1	protein_coding	+
chr1_89366876_89367076	chr1	89366876	89367076	ENSMUSG00000026258.4	3110079O15Rik	ENSMUST00000027476.4	protein_coding	+
chr1_89382712_89383758	chr1	89382712	89383758	ENSMUSG00000026259.8	Ngef	ENSMUST00000166463.1	retained_intron	-
chr1_89382712_89383758	chr1	89382712	89383758	ENSMUSG00000026259.8	Ngef	ENSMUST00000168235.1	protein_coding	-
chr1_89405791_89407770	chr1	89405791	89407770	ENSMUSG00000079434.2	Neu2	ENSMUST00000166055.1	protein_coding	+
chr1_89405791_89407770	chr1	89405791	89407770	ENSMUSG00000026259.8	Ngef	ENSMUST00000027477.8	protein_coding	-
chr1_89469623_89470247	chr1	89469623	89470247	ENSMUSG00000026259.8	Ngef	ENSMUST00000068681.5	protein_coding	-
chr1_89470263_89472064	chr1	89470263	89472064	ENSMUSG00000079434.2	Neu2	ENSMUST00000166259.1	protein_coding	+
chr1_89470263_89472064	chr1	89470263	89472064	ENSMUSG00000079434.2	Neu2	ENSMUST00000172222.1	protein_coding	+
chr1_89470263_89472064	chr1	89470263	89472064	ENSMUSG00000079434.2	Neu2	ENSMUST00000163606.1	protein_coding	+
chr1_89470263_89472064	chr1	89470263	89472064	ENSMUSG00000026259.8	Ngef	ENSMUST00000068681.5	protein_coding	-
chr1_89479385_89480871	chr1	89479385	89480871	ENSMUSG00000079434.2	Neu2	ENSMUST00000164128.1	protein_coding	+
chr1_89490383_89491707	chr1	89490383	89491707	ENSMUSG00000079434.2	Neu2	ENSMUST00000165109.1	protein_coding	+
chr1_89490383_89491707	chr1	89490383	89491707	ENSMUSG00000079434.2	Neu2	ENSMUST00000070898.5	protein_coding	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000169754.1	protein_coding	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000163222.1	retained_intron	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000042275.8	protein_coding	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000164592.1	processed_transcript	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000072999.6	nonsense_mediated_decay	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000168783.1	protein_coding	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000165554.1	protein_coding	+
chr1_89516542_89519049	chr1	89516542	89519049	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000163576.1	protein_coding	+
chr1_89605133_89606747	chr1	89605133	89606747	ENSMUSG00000026288.8	Inpp5d	ENSMUST00000163548.1	processed_transcript	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000144047.1	protein_coding	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000027512.6	protein_coding	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000133072.1	retained_intron	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000137638.1	retained_intron	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000113186.1	protein_coding	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000113190.2	protein_coding	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000113188.2	protein_coding	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000170601.1	protein_coding	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000151037.1	retained_intron	+
chr1_89651971_89653332	chr1	89651971	89653332	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000134603.1	retained_intron	+
chr1_89662321_89663365	chr1	89662321	89663365	ENSMUSG00000026289.8	Atg16l1	ENSMUST00000129431.1	retained_intron	+
chr1_89681175_89681468	chr1	89681175	89681468	ENSMUSG00000089281.1	Scarna6	ENSMUST00000158656.1	snoRNA	+
chr1_89708751_89709002	chr1	89708751	89709002	ENSMUSG00000056055.6	Sag	ENSMUST00000144334.1	processed_transcript	+
chr1_89749387_89751885	chr1	89749387	89751885	ENSMUSG00000070738.4	Dgkd	ENSMUST00000027517.7	protein_coding	+
chr1_89904161_89905786	chr1	89904161	89905786	ENSMUSG00000005501.7	Usp40	ENSMUST00000113153.1	protein_coding	-
chr1_89904161_89905786	chr1	89904161	89905786	ENSMUSG00000005501.7	Usp40	ENSMUST00000040783.4	protein_coding	-
chr1_89910782_89912395	chr1	89910782	89912395	ENSMUSG00000077075.1	AC087801.1	ENSMUST00000103887.1	miRNA	+
chr1_89920708_89922256	chr1	89920708	89922256	ENSMUSG00000083478.1	Gm15375	ENSMUST00000119510.1	transcribed_unprocessed_pseudogene	+
chr1_89951522_89952316	chr1	89951522	89952316	ENSMUSG00000090165.2	Ugt1a10	ENSMUST00000138182.1	protein_coding	+
chr1_89951522_89952316	chr1	89951522	89952316	ENSMUSG00000090165.2	Ugt1a10	ENSMUST00000113142.3	protein_coding	+
chr1_89951522_89952316	chr1	89951522	89952316	ENSMUSG00000090165.2	Ugt1a10	ENSMUST00000173325.1	protein_coding	+
chr1_89966895_89967779	chr1	89966895	89967779	ENSMUSG00000090175.1	Ugt1a9	ENSMUST00000073772.4	protein_coding	+
chr1_89990590_89992149	chr1	89990590	89992149	ENSMUSG00000090124.1	Ugt1a7c	ENSMUST00000150634.1	protein_coding	+
chr1_89990590_89992149	chr1	89990590	89992149	ENSMUSG00000090124.1	Ugt1a7c	ENSMUST00000058237.7	protein_coding	+
chr1_89990590_89992149	chr1	89990590	89992149	ENSMUSG00000090124.1	Ugt1a7c	ENSMUST00000126203.1	nonsense_mediated_decay	+
chr1_89999438_89999887	chr1	89999438	89999887	ENSMUSG00000054545.10	Ugt1a6a	ENSMUST00000113135.3	protein_coding	+
chr1_89999438_89999887	chr1	89999438	89999887	ENSMUSG00000090145.1	Ugt1a6b	ENSMUST00000113138.1	protein_coding	+
chr1_89999438_89999887	chr1	89999438	89999887	ENSMUSG00000054545.10	Ugt1a6a	ENSMUST00000169501.1	protein_coding	+
chr1_90030112_90031473	chr1	90030112	90031473	ENSMUSG00000054545.10	Ugt1a6a	ENSMUST00000113134.1	protein_coding	+
chr1_90030112_90031473	chr1	90030112	90031473	ENSMUSG00000054545.10	Ugt1a6a	ENSMUST00000124852.1	retained_intron	+
chr1_90030112_90031473	chr1	90030112	90031473	ENSMUSG00000054545.10	Ugt1a6a	ENSMUST00000140092.1	protein_coding	+
chr1_90034788_90035067	chr1	90034788	90035067	ENSMUSG00000054545.10	Ugt1a6a	ENSMUST00000014263.4	protein_coding	+
chr1_90049383_90050338	chr1	90049383	90050338	ENSMUSG00000082677.1	Gm15371	ENSMUST00000117057.1	transcribed_unprocessed_pseudogene	+
chr1_90061953_90063424	chr1	90061953	90063424	ENSMUSG00000089943.1	Ugt1a5	ENSMUST00000097659.4	protein_coding	+
chr1_90082732_90083499	chr1	90082732	90083499	ENSMUSG00000081488.1	Gm15368	ENSMUST00000120438.1	transcribed_unprocessed_pseudogene	+
chr1_90087992_90088639	chr1	90087992	90088639	ENSMUSG00000083277.1	Gm15376	ENSMUST00000122258.1	transcribed_unprocessed_pseudogene	+
chr1_90096968_90097423	chr1	90096968	90097423	ENSMUSG00000090171.1	Ugt1a2	ENSMUST00000049289.8	protein_coding	+
chr1_90101761_90102885	chr1	90101761	90102885	ENSMUSG00000081984.2	Dnajb3	ENSMUST00000119972.2	protein_coding	-
chr1_90166154_90166834	chr1	90166154	90166834	ENSMUSG00000044783.9	Hjurp	ENSMUST00000127446.1	protein_coding	-
chr1_90215040_90215672	chr1	90215040	90215672	ENSMUSG00000036251.9	Trpm8	ENSMUST00000171176.1	protein_coding	+
chr1_90249454_90249658	chr1	90249454	90249658	ENSMUSG00000085420.1	4930453O03Rik	ENSMUST00000147594.1	antisense	-
chr1_90302860_90304865	chr1	90302860	90304865	ENSMUSG00000026295.5	Spp2	ENSMUST00000027518.5	protein_coding	+
chr1_90406428_90406879	chr1	90406428	90406879	ENSMUSG00000062310.6	Glrp1	ENSMUST00000067625.7	protein_coding	-
chr1_90597517_90599289	chr1	90597517	90599289	ENSMUSG00000049866.6	Arl4c	ENSMUST00000159814.1	protein_coding	-
chr1_90597517_90599289	chr1	90597517	90599289	ENSMUSG00000049866.6	Arl4c	ENSMUST00000051236.4	nonsense_mediated_decay	-
chr1_90966006_90968093	chr1	90966006	90968093	ENSMUSG00000036206.6	Sh3bp4	ENSMUST00000066279.4	protein_coding	+
chr1_90966006_90968093	chr1	90966006	90968093	ENSMUSG00000036206.6	Sh3bp4	ENSMUST00000123745.1	processed_transcript	+
chr1_91350370_91351751	chr1	91350370	91351751	ENSMUSG00000055013.7	Agap1	ENSMUST00000074945.4	protein_coding	+
chr1_91350370_91351751	chr1	91350370	91351751	ENSMUSG00000055013.7	Agap1	ENSMUST00000027521.8	protein_coding	+
chr1_91459916_91460362	chr1	91459916	91460362	ENSMUSG00000088371.1	5S_rRNA	ENSMUST00000157746.1	rRNA	+
chr1_91826792_91827436	chr1	91826792	91827436	ENSMUSG00000092627.1	D130058E05Rik	ENSMUST00000173856.1	protein_coding	+
chr1_91829610_91829996	chr1	91829610	91829996	ENSMUSG00000034486.7	Gbx2	ENSMUST00000036954.7	protein_coding	-
chr1_91910692_91911462	chr1	91910692	91911462	ENSMUSG00000067081.5	Asb18	ENSMUST00000113098.2	protein_coding	-
chr1_91910692_91911462	chr1	91910692	91911462	ENSMUSG00000067081.5	Asb18	ENSMUST00000151330.1	nonsense_mediated_decay	-
chr1_91910692_91911462	chr1	91910692	91911462	ENSMUSG00000067081.5	Asb18	ENSMUST00000086882.1	protein_coding	-
chr1_91910692_91911462	chr1	91910692	91911462	ENSMUSG00000067081.5	Asb18	ENSMUST00000154228.1	nonsense_mediated_decay	-
chr1_91910692_91911462	chr1	91910692	91911462	ENSMUSG00000067081.5	Asb18	ENSMUST00000170165.1	protein_coding	-
chr1_91910692_91911462	chr1	91910692	91911462	ENSMUSG00000067081.5	Asb18	ENSMUST00000097656.3	protein_coding	-
chr1_92049688_92050406	chr1	92049688	92050406	ENSMUSG00000026301.8	Iqca	ENSMUST00000164210.1	protein_coding	-
chr1_92049688_92050406	chr1	92049688	92050406	ENSMUSG00000026301.8	Iqca	ENSMUST00000113094.2	protein_coding	-
chr1_92100314_92101241	chr1	92100314	92101241	ENSMUSG00000044337.5	Cxcr7	ENSMUST00000065587.4	protein_coding	+
chr1_92100314_92101241	chr1	92100314	92101241	ENSMUSG00000044337.5	Cxcr7	ENSMUST00000159654.1	processed_transcript	+
chr1_92499378_92500417	chr1	92499378	92500417	ENSMUSG00000034432.5	Cops8	ENSMUST00000036153.5	protein_coding	+
chr1_92740194_92740791	chr1	92740194	92740791	ENSMUSG00000048126.9	Col6a3	ENSMUST00000130846.1	protein_coding	-
chr1_92740194_92740791	chr1	92740194	92740791	ENSMUSG00000048126.9	Col6a3	ENSMUST00000056925.8	protein_coding	-
chr1_92740194_92740791	chr1	92740194	92740791	ENSMUSG00000048126.9	Col6a3	ENSMUST00000097653.3	processed_transcript	-
chr1_92811411_92812271	chr1	92811411	92812271	ENSMUSG00000026303.6	Mlph	ENSMUST00000027528.6	protein_coding	+
chr1_92823911_92825767	chr1	92823911	92825767	ENSMUSG00000026303.6	Mlph	ENSMUST00000125149.1	protein_coding	+
chr1_92863839_92864555	chr1	92863839	92864555	ENSMUSG00000026304.7	Rab17	ENSMUST00000135819.1	processed_transcript	-
chr1_92863839_92864555	chr1	92863839	92864555	ENSMUSG00000026304.7	Rab17	ENSMUST00000131428.1	protein_coding	-
chr1_92865028_92866503	chr1	92865028	92866503	ENSMUSG00000026304.7	Rab17	ENSMUST00000130042.1	protein_coding	-
chr1_92865028_92866503	chr1	92865028	92866503	ENSMUSG00000026304.7	Rab17	ENSMUST00000128226.1	processed_transcript	-
chr1_92865028_92866503	chr1	92865028	92866503	ENSMUSG00000026304.7	Rab17	ENSMUST00000027529.5	protein_coding	-
chr1_92894572_92897471	chr1	92894572	92897471	ENSMUSG00000026305.8	Lrrfip1	ENSMUST00000068116.6	protein_coding	+
chr1_92948711_92950873	chr1	92948711	92950873	ENSMUSG00000026305.8	Lrrfip1	ENSMUST00000097650.3	protein_coding	+
chr1_92948711_92950873	chr1	92948711	92950873	ENSMUSG00000026305.8	Lrrfip1	ENSMUST00000097649.3	protein_coding	+
chr1_92948711_92950873	chr1	92948711	92950873	ENSMUSG00000026305.8	Lrrfip1	ENSMUST00000068167.5	protein_coding	+
chr1_92948711_92950873	chr1	92948711	92950873	ENSMUSG00000026305.8	Lrrfip1	ENSMUST00000169388.1	protein_coding	+
chr1_93041353_93042053	chr1	93041353	93042053	ENSMUSG00000070732.1	Rbm44	ENSMUST00000094698.1	protein_coding	+
chr1_93075633_93079010	chr1	93075633	93079010	ENSMUSG00000034353.7	Ramp1	ENSMUST00000048383.5	protein_coding	+
chr1_93075633_93079010	chr1	93075633	93079010	ENSMUSG00000034353.7	Ramp1	ENSMUST00000097648.4	protein_coding	+
chr1_93075633_93079010	chr1	93075633	93079010	ENSMUSG00000034353.7	Ramp1	ENSMUST00000165855.1	protein_coding	+
chr1_93146099_93148315	chr1	93146099	93148315	ENSMUSG00000034343.7	Ube2f	ENSMUST00000059743.5	protein_coding	+
chr1_93146099_93148315	chr1	93146099	93148315	ENSMUSG00000034343.7	Ube2f	ENSMUST00000171165.1	protein_coding	+
chr1_93146099_93148315	chr1	93146099	93148315	ENSMUSG00000034343.7	Ube2f	ENSMUST00000171112.1	protein_coding	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000027532.6	protein_coding	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000123651.1	retained_intron	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000142488.1	protein_coding	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000154045.1	nonsense_mediated_decay	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000153621.1	retained_intron	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000124832.1	protein_coding	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000147523.1	protein_coding	+
chr1_93194247_93195436	chr1	93194247	93195436	ENSMUSG00000026307.6	Scly	ENSMUST00000142802.1	processed_transcript	+
chr1_93195571_93197009	chr1	93195571	93197009	ENSMUSG00000026307.6	Scly	ENSMUST00000145843.1	protein_coding	+
chr1_93217816_93219065	chr1	93217816	93219065	ENSMUSG00000049515.5	Espnl	ENSMUST00000088904.2	protein_coding	+
chr1_93217816_93219065	chr1	93217816	93219065	ENSMUSG00000090322.1	Gm17090	ENSMUST00000171768.1	antisense	-
chr1_93246526_93248163	chr1	93246526	93248163	ENSMUSG00000026308.8	Klhl30	ENSMUST00000027533.8	protein_coding	+
chr1_93262428_93263846	chr1	93262428	93263846	ENSMUSG00000047443.8	Fam132b	ENSMUST00000086861.5	protein_coding	+
chr1_93294328_93296130	chr1	93294328	93296130	ENSMUSG00000026309.7	Ilkap	ENSMUST00000027534.6	protein_coding	-
chr1_93294328_93296130	chr1	93294328	93296130	ENSMUSG00000026309.7	Ilkap	ENSMUST00000113031.1	protein_coding	-
chr1_93308934_93311318	chr1	93308934	93311318	ENSMUSG00000067071.2	Hes6	ENSMUST00000150520.1	processed_transcript	-
chr1_93308934_93311318	chr1	93308934	93311318	ENSMUSG00000067071.2	Hes6	ENSMUST00000155752.1	retained_intron	-
chr1_93308934_93311318	chr1	93308934	93311318	ENSMUSG00000067071.2	Hes6	ENSMUST00000132188.1	retained_intron	-
chr1_93308934_93311318	chr1	93308934	93311318	ENSMUSG00000067071.2	Hes6	ENSMUST00000086851.1	protein_coding	-
chr1_93308934_93311318	chr1	93308934	93311318	ENSMUSG00000067071.2	Hes6	ENSMUST00000126136.1	retained_intron	-
chr1_93354218_93356739	chr1	93354218	93356739	ENSMUSG00000055866.7	Per2	ENSMUST00000164778.1	protein_coding	-
chr1_93354218_93356739	chr1	93354218	93356739	ENSMUSG00000055866.7	Per2	ENSMUST00000069620.7	protein_coding	-
chr1_93390588_93392203	chr1	93390588	93392203	ENSMUSG00000034292.7	Traf3ip1	ENSMUST00000047242.7	protein_coding	+
chr1_93436151_93437893	chr1	93436151	93437893	ENSMUSG00000026311.9	Asb1	ENSMUST00000164117.1	protein_coding	+
chr1_93436151_93437893	chr1	93436151	93437893	ENSMUSG00000026311.9	Asb1	ENSMUST00000027538.7	protein_coding	+
chr1_93436151_93437893	chr1	93436151	93437893	ENSMUSG00000026311.9	Asb1	ENSMUST00000113020.2	protein_coding	+
chr1_93436151_93437893	chr1	93436151	93437893	ENSMUSG00000026311.9	Asb1	ENSMUST00000086843.4	protein_coding	+
chr1_93436151_93437893	chr1	93436151	93437893	ENSMUSG00000026311.9	Asb1	ENSMUST00000163232.1	protein_coding	+
chr1_93697565_93698932	chr1	93697565	93698932	ENSMUSG00000007805.3	Twist2	ENSMUST00000007949.3	protein_coding	+
chr1_93827344_93828290	chr1	93827344	93828290	ENSMUSG00000073617.2	Hdac4	ENSMUST00000097644.2	protein_coding	-
chr1_93884886_93885884	chr1	93884886	93885884	ENSMUSG00000079420.2	Gm17418	ENSMUST00000113008.2	lincRNA	+
chr1_93903308_93903607	chr1	93903308	93903607	ENSMUSG00000026313.8	Hdac4	ENSMUST00000165529.1	protein_coding	-
chr1_94044418_94045534	chr1	94044418	94045534	ENSMUSG00000026313.8	Hdac4	ENSMUST00000008995.8	protein_coding	-
chr1_94357005_94357937	chr1	94357005	94357937	ENSMUSG00000026260.6	Ndufa10	ENSMUST00000153897.1	retained_intron	-
chr1_94369629_94371184	chr1	94369629	94371184	ENSMUSG00000026260.6	Ndufa10	ENSMUST00000027478.6	protein_coding	-
chr1_94414648_94414983	chr1	94414648	94414983	ENSMUSG00000042849.4	Olfr1414	ENSMUST00000062353.4	protein_coding	-
chr1_94536870_94537370	chr1	94536870	94537370	ENSMUSG00000073616.4	Myeov2	ENSMUST00000112999.1	protein_coding	-
chr1_94537710_94539104	chr1	94537710	94539104	ENSMUSG00000073616.4	Myeov2	ENSMUST00000129730.1	retained_intron	-
chr1_94537710_94539104	chr1	94537710	94539104	ENSMUSG00000073616.4	Myeov2	ENSMUST00000097642.3	protein_coding	-
chr1_94537710_94539104	chr1	94537710	94539104	ENSMUSG00000073616.4	Myeov2	ENSMUST00000148508.1	nonsense_mediated_decay	-
chr1_94544215_94545721	chr1	94544215	94545721	ENSMUSG00000044055.5	Otos	ENSMUST00000159803.1	retained_intron	-
chr1_94544215_94545721	chr1	94544215	94545721	ENSMUSG00000044055.5	Otos	ENSMUST00000053144.3	protein_coding	-
chr1_94727534_94731555	chr1	94727534	94731555	ENSMUSG00000034220.6	Gpc1	ENSMUST00000045970.6	protein_coding	+
chr1_94746542_94747135	chr1	94746542	94747135	ENSMUSG00000065470.1	Mir149	ENSMUST00000083536.1	miRNA	+
chr1_94799197_94799778	chr1	94799197	94799778	ENSMUSG00000034212.6	Ankmy1	ENSMUST00000160548.1	protein_coding	-
chr1_94799197_94799778	chr1	94799197	94799778	ENSMUSG00000034212.6	Ankmy1	ENSMUST00000112998.1	protein_coding	-
chr1_94799197_94799778	chr1	94799197	94799778	ENSMUSG00000034212.6	Ankmy1	ENSMUST00000045770.4	protein_coding	-
chr1_94803181_94804544	chr1	94803181	94804544	ENSMUSG00000047067.6	Dusp28	ENSMUST00000060913.6	protein_coding	+
chr1_94806652_94807481	chr1	94806652	94807481	ENSMUSG00000091828.1	5033417F24Rik	ENSMUST00000164793.1	lincRNA	-
chr1_94807537_94809211	chr1	94807537	94809211	ENSMUSG00000026269.7	Rnpepl1	ENSMUST00000027487.7	protein_coding	+
chr1_94807537_94809211	chr1	94807537	94809211	ENSMUSG00000091828.1	5033417F24Rik	ENSMUST00000164793.1	lincRNA	-
chr1_94830358_94832065	chr1	94830358	94832065	ENSMUSG00000026270.5	Capn10	ENSMUST00000027488.4	protein_coding	+
chr1_94830358_94832065	chr1	94830358	94832065	ENSMUSG00000026270.5	Capn10	ENSMUST00000117814.1	protein_coding	+
chr1_94830358_94832065	chr1	94830358	94832065	ENSMUSG00000026270.5	Capn10	ENSMUST00000152983.1	nonsense_mediated_decay	+
chr1_94869302_94869846	chr1	94869302	94869846	ENSMUSG00000026271.9	Gpr35	ENSMUST00000027489.7	protein_coding	+
chr1_94875372_94875658	chr1	94875372	94875658	ENSMUSG00000026271.9	Gpr35	ENSMUST00000169198.1	protein_coding	+
chr1_94902615_94902975	chr1	94902615	94902975	ENSMUSG00000045091.4	Aqp12	ENSMUST00000059676.4	protein_coding	+
chr1_94965276_94965492	chr1	94965276	94965492	ENSMUSG00000014602.8	Kif1a	ENSMUST00000168448.1	protein_coding	-
chr1_94996922_94999149	chr1	94996922	94999149	ENSMUSG00000014602.8	Kif1a	ENSMUST00000112958.2	protein_coding	-
chr1_94996922_94999149	chr1	94996922	94999149	ENSMUSG00000014602.8	Kif1a	ENSMUST00000171796.1	protein_coding	-
chr1_94996922_94999149	chr1	94996922	94999149	ENSMUSG00000014602.8	Kif1a	ENSMUST00000171556.1	protein_coding	-
chr1_95031424_95032554	chr1	95031424	95032554	ENSMUSG00000026272.5	Agxt	ENSMUST00000027491.5	protein_coding	+
chr1_95056314_95058913	chr1	95056314	95058913	ENSMUSG00000034159.6	2310007B03Rik	ENSMUST00000143419.1	protein_coding	-
chr1_95056314_95058913	chr1	95056314	95058913	ENSMUSG00000034159.6	2310007B03Rik	ENSMUST00000043718.5	protein_coding	-
chr1_95131736_95133447	chr1	95131736	95133447	ENSMUSG00000047793.7	Sned1	ENSMUST00000062202.7	protein_coding	+
chr1_95131736_95133447	chr1	95131736	95133447	ENSMUSG00000047793.7	Sned1	ENSMUST00000172289.1	retained_intron	+
chr1_95201991_95203146	chr1	95201991	95203146	ENSMUSG00000026273.7	Mterfd2	ENSMUST00000152307.1	retained_intron	-
chr1_95201991_95203146	chr1	95201991	95203146	ENSMUSG00000026273.7	Mterfd2	ENSMUST00000112942.1	protein_coding	-
chr1_95201991_95203146	chr1	95201991	95203146	ENSMUSG00000026273.7	Mterfd2	ENSMUST00000027492.7	protein_coding	-
chr1_95201991_95203146	chr1	95201991	95203146	ENSMUSG00000026273.7	Mterfd2	ENSMUST00000112944.1	protein_coding	-
chr1_95239080_95240696	chr1	95239080	95240696	ENSMUSG00000026275.7	Ppp1r7	ENSMUST00000027494.4	protein_coding	+
chr1_95239080_95240696	chr1	95239080	95240696	ENSMUSG00000026274.5	Pask	ENSMUST00000128253.1	protein_coding	-
chr1_95239080_95240696	chr1	95239080	95240696	ENSMUSG00000026274.5	Pask	ENSMUST00000139028.1	retained_intron	-
chr1_95239080_95240696	chr1	95239080	95240696	ENSMUSG00000026274.5	Pask	ENSMUST00000027493.3	protein_coding	-
chr1_95239080_95240696	chr1	95239080	95240696	ENSMUSG00000026275.7	Ppp1r7	ENSMUST00000127141.1	nonsense_mediated_decay	+
chr1_95259155_95259846	chr1	95259155	95259846	ENSMUSG00000064389.1	U6	ENSMUST00000082455.1	snRNA	+
chr1_95270137_95270624	chr1	95270137	95270624	ENSMUSG00000034107.4	Ano7	ENSMUST00000058682.4	protein_coding	+
chr1_95340972_95342990	chr1	95340972	95342990	ENSMUSG00000034088.9	Hdlbp	ENSMUST00000042498.7	protein_coding	-
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000027495.8	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000136182.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000131175.2	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000172165.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000152778.1	retained_intron	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000153826.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000129211.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000168776.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000112912.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000149532.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000142401.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000026276.10	Sept2	ENSMUST00000150931.1	protein_coding	+
chr1_95374361_95376377	chr1	95374361	95376377	ENSMUSG00000034088.9	Hdlbp	ENSMUST00000170883.1	protein_coding	-
chr1_95407988_95409412	chr1	95407988	95409412	ENSMUSG00000034066.6	Farp2	ENSMUST00000120301.1	protein_coding	+
chr1_95407988_95409412	chr1	95407988	95409412	ENSMUSG00000034066.6	Farp2	ENSMUST00000122402.1	protein_coding	+
chr1_95530510_95533172	chr1	95530510	95533172	ENSMUSG00000026277.7	Stk25	ENSMUST00000133769.1	protein_coding	-
chr1_95530510_95533172	chr1	95530510	95533172	ENSMUSG00000026277.7	Stk25	ENSMUST00000027498.7	protein_coding	-
chr1_95530510_95533172	chr1	95530510	95533172	ENSMUSG00000026277.7	Stk25	ENSMUST00000151068.1	retained_intron	-
chr1_95581874_95584208	chr1	95581874	95584208	ENSMUSG00000026278.8	Bok	ENSMUST00000027499.6	protein_coding	+
chr1_95647891_95648279	chr1	95647891	95648279	ENSMUSG00000026280.10	Atg4b	ENSMUST00000149436.1	protein_coding	+
chr1_95650325_95652085	chr1	95650325	95652085	ENSMUSG00000026280.10	Atg4b	ENSMUST00000027502.9	protein_coding	+
chr1_95650325_95652085	chr1	95650325	95652085	ENSMUSG00000026280.10	Atg4b	ENSMUST00000135762.1	retained_intron	+
chr1_95650325_95652085	chr1	95650325	95652085	ENSMUSG00000026279.7	Thap4	ENSMUST00000027500.6	protein_coding	-
chr1_95650325_95652085	chr1	95650325	95652085	ENSMUSG00000026279.7	Thap4	ENSMUST00000112905.2	protein_coding	-
chr1_95698158_95698944	chr1	95698158	95698944	ENSMUSG00000026281.9	Dtymk	ENSMUST00000112890.2	protein_coding	-
chr1_95698158_95698944	chr1	95698158	95698944	ENSMUSG00000026281.9	Dtymk	ENSMUST00000027503.7	protein_coding	-
chr1_95700030_95701373	chr1	95700030	95701373	ENSMUSG00000026283.7	Ing5	ENSMUST00000027505.6	protein_coding	+
chr1_95721076_95722645	chr1	95721076	95722645	ENSMUSG00000073609.3	D2hgdh	ENSMUST00000097633.3	protein_coding	+
chr1_95721076_95722645	chr1	95721076	95722645	ENSMUSG00000073609.3	D2hgdh	ENSMUST00000112881.1	protein_coding	+
chr1_95757689_95757949	chr1	95757689	95757949	ENSMUSG00000034005.7	Gal3st2	ENSMUST00000094663.2	protein_coding	+
chr1_95916744_95917101	chr1	95916744	95917101	ENSMUSG00000034000.8	Neu4	ENSMUST00000050890.6	protein_coding	+
chr1_95916744_95917101	chr1	95916744	95917101	ENSMUSG00000034000.8	Neu4	ENSMUST00000169131.1	protein_coding	+
chr1_95948402_95951345	chr1	95948402	95951345	ENSMUSG00000026285.6	Pdcd1	ENSMUST00000027507.6	protein_coding	-
chr1_97209411_97211345	chr1	97209411	97211345	ENSMUSG00000051185.8	Fam174a	ENSMUST00000059975.6	protein_coding	+
chr1_97563290_97564928	chr1	97563290	97564928	ENSMUSG00000040710.4	St8sia4	ENSMUST00000043336.4	protein_coding	-
chr1_98767456_98769322	chr1	98767456	98769322	ENSMUSG00000092052.1	Gm5101	ENSMUST00000171463.1	lincRNA	+
chr1_98767456_98769322	chr1	98767456	98769322	ENSMUSG00000040693.6	Slco4c1	ENSMUST00000071985.4	protein_coding	-
chr1_98893852_98894386	chr1	98893852	98894386	ENSMUSG00000045463.8	Slco6b1	ENSMUST00000060976.5	protein_coding	-
chr1_98893852_98894386	chr1	98893852	98894386	ENSMUSG00000090974.1	Slco6b1	ENSMUST00000167383.1	processed_transcript	-
chr1_99024751_99025076	chr1	99024751	99025076	ENSMUSG00000026331.7	Slco6c1	ENSMUST00000027569.7	protein_coding	-
chr1_99556924_99559301	chr1	99556924	99559301	ENSMUSG00000044768.10	D1Ertd622e	ENSMUST00000142234.1	nonsense_mediated_decay	-
chr1_99556924_99559301	chr1	99556924	99559301	ENSMUSG00000044768.10	D1Ertd622e	ENSMUST00000053033.7	protein_coding	-
chr1_99556924_99559301	chr1	99556924	99559301	ENSMUSG00000044768.10	D1Ertd622e	ENSMUST00000149927.1	protein_coding	-
chr1_99556924_99559301	chr1	99556924	99559301	ENSMUSG00000044768.10	D1Ertd622e	ENSMUST00000153115.1	nonsense_mediated_decay	-
chr1_99657050_99658489	chr1	99657050	99658489	ENSMUSG00000040648.7	Ppip5k2	ENSMUST00000163249.1	protein_coding	-
chr1_99657050_99658489	chr1	99657050	99658489	ENSMUSG00000040648.7	Ppip5k2	ENSMUST00000171129.1	protein_coding	-
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000026333.8	Gin1	ENSMUST00000112844.3	protein_coding	+
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000026333.8	Gin1	ENSMUST00000112842.1	protein_coding	+
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000026333.8	Gin1	ENSMUST00000027571.6	protein_coding	+
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000026333.8	Gin1	ENSMUST00000122925.1	processed_transcript	+
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000026333.8	Gin1	ENSMUST00000138142.1	nonsense_mediated_decay	+
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000040648.7	Ppip5k2	ENSMUST00000042509.6	protein_coding	-
chr1_99665658_99667591	chr1	99665658	99667591	ENSMUSG00000040648.7	Ppip5k2	ENSMUST00000112845.1	protein_coding	-
chr1_99730861_99731555	chr1	99730861	99731555	ENSMUSG00000026335.9	Pam	ENSMUST00000159585.1	retained_intron	-
chr1_99760635_99761151	chr1	99760635	99761151	ENSMUSG00000026335.9	Pam	ENSMUST00000161071.1	retained_intron	-
chr1_99846151_99846351	chr1	99846151	99846351	ENSMUSG00000089782.1	Gm3531	ENSMUST00000162698.1	transcribed_processed_pseudogene	-
chr1_99872695_99874128	chr1	99872695	99874128	ENSMUSG00000026335.9	Pam	ENSMUST00000162426.1	processed_transcript	-
chr1_99872695_99874128	chr1	99872695	99874128	ENSMUSG00000026335.9	Pam	ENSMUST00000159428.1	retained_intron	-
chr1_99872695_99874128	chr1	99872695	99874128	ENSMUSG00000026335.9	Pam	ENSMUST00000167040.1	protein_coding	-
chr1_99872695_99874128	chr1	99872695	99874128	ENSMUSG00000026335.9	Pam	ENSMUST00000161567.1	protein_coding	-
chr1_99943289_99945332	chr1	99943289	99945332	ENSMUSG00000089706.1	B230216N24Rik	ENSMUST00000161661.1	sense_intronic	-
chr1_99943289_99945332	chr1	99943289	99945332	ENSMUSG00000089706.1	B230216N24Rik	ENSMUST00000159324.1	sense_intronic	-
chr1_99953981_99954503	chr1	99953981	99954503	ENSMUSG00000089706.1	B230216N24Rik	ENSMUST00000159353.1	sense_intronic	-
chr1_99991060_99993040	chr1	99991060	99993040	ENSMUSG00000026335.9	Pam	ENSMUST00000163007.1	processed_transcript	-
chr1_99991060_99993040	chr1	99991060	99993040	ENSMUSG00000026335.9	Pam	ENSMUST00000164496.1	protein_coding	-
chr1_99991060_99993040	chr1	99991060	99993040	ENSMUSG00000026335.9	Pam	ENSMUST00000097625.3	protein_coding	-
chr1_99991060_99993040	chr1	99991060	99993040	ENSMUSG00000026335.9	Pam	ENSMUST00000058762.8	protein_coding	-
chr1_100317434_100317815	chr1	100317434	100317815	ENSMUSG00000026336.7	Slco6d1	ENSMUST00000027575.6	protein_coding	+
chr1_100317434_100317815	chr1	100317434	100317815	ENSMUSG00000026336.7	Slco6d1	ENSMUST00000162468.1	nonsense_mediated_decay	+
chr1_100317434_100317815	chr1	100317434	100317815	ENSMUSG00000026336.7	Slco6d1	ENSMUST00000160796.1	protein_coding	+
chr1_100317897_100318220	chr1	100317897	100318220	ENSMUSG00000026336.7	Slco6d1	ENSMUST00000027575.6	protein_coding	+
chr1_100317897_100318220	chr1	100317897	100318220	ENSMUSG00000026336.7	Slco6d1	ENSMUST00000162468.1	nonsense_mediated_decay	+
chr1_100317897_100318220	chr1	100317897	100318220	ENSMUSG00000026336.7	Slco6d1	ENSMUST00000160796.1	protein_coding	+
chr1_101668633_101670138	chr1	101668633	101670138	ENSMUSG00000067028.4	Cntnap5b	ENSMUST00000163150.1	protein_coding	+
chr1_101668633_101670138	chr1	101668633	101670138	ENSMUSG00000067028.4	Cntnap5b	ENSMUST00000086738.3	protein_coding	+
chr1_101668633_101670138	chr1	101668633	101670138	ENSMUSG00000067028.4	Cntnap5b	ENSMUST00000171995.1	protein_coding	+
chr1_101687410_101687640	chr1	101687410	101687640	ENSMUSG00000082431.3	Gm7110	ENSMUST00000117372.1	transcribed_processed_pseudogene	-
chr1_106664874_106667826	chr1	106664874	106667826	ENSMUSG00000050840.8	Cdh20	ENSMUST00000062528.8	protein_coding	+
chr1_106808517_106809370	chr1	106808517	106809370	ENSMUSG00000089866.1	Gm15699	ENSMUST00000159213.1	antisense	-
chr1_107251450_107254137	chr1	107251450	107254137	ENSMUSG00000090759.1	Gm17634	ENSMUST00000169249.1	lincRNA	+
chr1_107251450_107254137	chr1	107251450	107254137	ENSMUSG00000047496.5	Rnf152	ENSMUST00000058688.5	protein_coding	-
chr1_107251450_107254137	chr1	107251450	107254137	ENSMUSG00000047496.5	Rnf152	ENSMUST00000172299.1	protein_coding	-
chr1_107462697_107463366	chr1	107462697	107463366	ENSMUSG00000056536.7	Pign	ENSMUST00000167416.1	protein_coding	-
chr1_107559539_107561611	chr1	107559539	107561611	ENSMUSG00000026319.6	2310035C23Rik	ENSMUST00000086721.3	protein_coding	+
chr1_107559539_107561611	chr1	107559539	107561611	ENSMUSG00000026319.6	2310035C23Rik	ENSMUST00000039173.6	protein_coding	+
chr1_107559539_107561611	chr1	107559539	107561611	ENSMUSG00000026319.6	2310035C23Rik	ENSMUST00000172039.1	protein_coding	+
chr1_107559539_107561611	chr1	107559539	107561611	ENSMUSG00000026319.6	2310035C23Rik	ENSMUST00000168674.1	protein_coding	+
chr1_107676448_107678637	chr1	107676448	107678637	ENSMUSG00000026321.6	Tnfrsf11a	ENSMUST00000027559.6	protein_coding	+
chr1_107841215_107842259	chr1	107841215	107842259	ENSMUSG00000089206.1	U6	ENSMUST00000158581.1	snRNA	+
chr1_107886285_107888945	chr1	107886285	107888945	ENSMUSG00000038866.9	Zcchc2	ENSMUST00000119166.1	protein_coding	+
chr1_107886285_107888945	chr1	107886285	107888945	ENSMUSG00000038866.9	Zcchc2	ENSMUST00000118196.1	protein_coding	+
chr1_108067551_108069668	chr1	108067551	108069668	ENSMUSG00000044340.6	Phlpp1	ENSMUST00000061047.6	protein_coding	+
chr1_108067551_108069668	chr1	108067551	108069668	ENSMUSG00000044340.6	Phlpp1	ENSMUST00000135810.1	retained_intron	+
chr1_108212807_108214183	chr1	108212807	108214183	ENSMUSG00000044340.6	Phlpp1	ENSMUST00000124895.1	processed_transcript	+
chr1_108438501_108438940	chr1	108438501	108438940	ENSMUSG00000054006.8	D630008O14Rik	ENSMUST00000149909.1	antisense	+
chr1_108438501_108438940	chr1	108438501	108438940	ENSMUSG00000054006.8	D630008O14Rik	ENSMUST00000144260.1	antisense	+
chr1_108610011_108611579	chr1	108610011	108611579	ENSMUSG00000057329.6	Bcl2	ENSMUST00000112751.1	protein_coding	-
chr1_108655267_108657118	chr1	108655267	108657118	ENSMUSG00000009905.4	Kdsr	ENSMUST00000010049.4	protein_coding	-
chr1_108692429_108694246	chr1	108692429	108694246	ENSMUSG00000009907.10	Vps4b	ENSMUST00000126057.1	retained_intron	-
chr1_108692429_108694246	chr1	108692429	108694246	ENSMUSG00000009907.10	Vps4b	ENSMUST00000094646.5	protein_coding	-
chr1_108692429_108694246	chr1	108692429	108694246	ENSMUSG00000009907.10	Vps4b	ENSMUST00000164686.1	protein_coding	-
chr1_108692429_108694246	chr1	108692429	108694246	ENSMUSG00000009907.10	Vps4b	ENSMUST00000112736.1	protein_coding	-
chr1_108757507_108758261	chr1	108757507	108758261	ENSMUSG00000067006.6	Serpinb5	ENSMUST00000086701.6	protein_coding	+
chr1_108757507_108758261	chr1	108757507	108758261	ENSMUSG00000067006.6	Serpinb5	ENSMUST00000112730.1	protein_coding	+
chr1_108766621_108767295	chr1	108766621	108767295	ENSMUSG00000067006.6	Serpinb5	ENSMUST00000112729.1	protein_coding	+
chr1_109296024_109296420	chr1	109296024	109296420	ENSMUSG00000067001.5	Serpinb7	ENSMUST00000154538.1	protein_coding	+
chr1_109486170_109487506	chr1	109486170	109487506	ENSMUSG00000026315.7	Serpinb8	ENSMUST00000112706.2	protein_coding	+
chr1_109486170_109487506	chr1	109486170	109487506	ENSMUSG00000026315.7	Serpinb8	ENSMUST00000000514.4	protein_coding	+
chr1_109486170_109487506	chr1	109486170	109487506	ENSMUSG00000026315.7	Serpinb8	ENSMUST00000151283.1	retained_intron	+
chr1_109583507_109583707	chr1	109583507	109583707	ENSMUSG00000086161.1	Gm15389	ENSMUST00000153774.1	lincRNA	+
chr1_111519303_111519585	chr1	111519303	111519585	ENSMUSG00000089037.1	SNORA17	ENSMUST00000158412.1	snoRNA	-
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000086681.5	protein_coding	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000137092.1	processed_transcript	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000112701.1	protein_coding	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000129923.1	processed_transcript	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000145188.1	protein_coding	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000131464.1	nonsense_mediated_decay	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000146282.1	processed_transcript	+
chr1_111878479_111880479	chr1	111878479	111880479	ENSMUSG00000026312.10	Cdh7	ENSMUST00000172005.1	protein_coding	+
chr1_111890471_111891104	chr1	111890471	111891104	ENSMUSG00000026312.10	Cdh7	ENSMUST00000027542.6	protein_coding	+
chr1_112873676_112874427	chr1	112873676	112874427	ENSMUSG00000047216.7	Cdh19	ENSMUST00000094626.3	protein_coding	-
chr1_113760558_113761992	chr1	113760558	113761992	ENSMUSG00000038702.5	Dsel	ENSMUST00000035462.5	protein_coding	-
chr1_117580940_117582679	chr1	117580940	117582679	ENSMUSG00000070695.3	Cntnap5a	ENSMUST00000043725.7	protein_coding	+
chr1_117580940_117582679	chr1	117580940	117582679	ENSMUSG00000070695.3	Cntnap5a	ENSMUST00000094621.3	protein_coding	+
chr1_120207263_120208943	chr1	120207263	120208943	ENSMUSG00000026374.8	Tsn	ENSMUST00000027623.7	protein_coding	-
chr1_120217830_120219456	chr1	120217830	120219456	ENSMUSG00000026377.6	Mki67ip	ENSMUST00000027626.6	protein_coding	+
chr1_120217830_120219456	chr1	120217830	120219456	ENSMUSG00000026377.6	Mki67ip	ENSMUST00000112688.3	protein_coding	+
chr1_120217830_120219456	chr1	120217830	120219456	ENSMUSG00000026377.6	Mki67ip	ENSMUST00000161495.1	protein_coding	+
chr1_120284717_120286930	chr1	120284717	120286930	ENSMUSG00000064302.6	Clasp1	ENSMUST00000049404.6	protein_coding	+
chr1_120284717_120286930	chr1	120284717	120286930	ENSMUSG00000064302.6	Clasp1	ENSMUST00000070989.6	protein_coding	+
chr1_120284717_120286930	chr1	120284717	120286930	ENSMUSG00000064302.6	Clasp1	ENSMUST00000165223.1	protein_coding	+
chr1_120349908_120350803	chr1	120349908	120350803	ENSMUSG00000077257.1	SNORA17	ENSMUST00000104069.1	snoRNA	-
chr1_120354928_120355158	chr1	120354928	120355158	ENSMUSG00000073596.1	2900060B14Rik	ENSMUST00000097615.1	protein_coding	-
chr1_120355294_120356580	chr1	120355294	120356580	ENSMUSG00000080542.1	U4atac	ENSMUST00000116892.1	snRNA	-
chr1_120355294_120356580	chr1	120355294	120356580	ENSMUSG00000073596.1	2900060B14Rik	ENSMUST00000097615.1	protein_coding	-
chr1_120373070_120373840	chr1	120373070	120373840	ENSMUSG00000079361.1	Gm11102	ENSMUST00000112681.1	protein_coding	+
chr1_120524013_120525624	chr1	120524013	120525624	ENSMUSG00000026380.9	Tcfcp2l1	ENSMUST00000027629.8	protein_coding	+
chr1_120578403_120579682	chr1	120578403	120579682	ENSMUSG00000088363.1	U1	ENSMUST00000157738.1	snRNA	+
chr1_120878465_120879588	chr1	120878465	120879588	ENSMUSG00000048402.8	Gli2	ENSMUST00000159678.1	protein_coding	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000161451.1	protein_coding	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000162607.1	protein_coding	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000161301.1	protein_coding	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000162552.1	nonsense_mediated_decay	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000161056.1	nonsense_mediated_decay	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000160991.1	nonsense_mediated_decay	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000159839.1	nonsense_mediated_decay	-
chr1_120949929_120950943	chr1	120949929	120950943	ENSMUSG00000048402.8	Gli2	ENSMUST00000062483.8	protein_coding	-
chr1_121317991_121319027	chr1	121317991	121319027	ENSMUSG00000037035.5	Inhbb	ENSMUST00000038765.5	protein_coding	-
chr1_121400504_121402014	chr1	121400504	121402014	ENSMUSG00000004451.8	Ralb	ENSMUST00000156213.1	retained_intron	-
chr1_121400504_121402014	chr1	121400504	121402014	ENSMUSG00000004451.8	Ralb	ENSMUST00000004565.8	protein_coding	-
chr1_121421537_121423496	chr1	121421537	121423496	ENSMUSG00000037015.8	Tmem185b	ENSMUST00000069755.7	pseudogene	+
chr1_121544573_121546572	chr1	121544573	121546572	ENSMUSG00000026383.8	Epb4.1l5	ENSMUST00000027632.7	protein_coding	-
chr1_121544573_121546572	chr1	121544573	121546572	ENSMUSG00000026383.8	Epb4.1l5	ENSMUST00000163147.1	protein_coding	-
chr1_121544573_121546572	chr1	121544573	121546572	ENSMUSG00000026383.8	Epb4.1l5	ENSMUST00000052404.6	protein_coding	-
chr1_121732858_121734626	chr1	121732858	121734626	ENSMUSG00000026384.7	Ptpn4	ENSMUST00000163621.1	protein_coding	-
chr1_121732858_121734626	chr1	121732858	121734626	ENSMUSG00000026384.7	Ptpn4	ENSMUST00000168303.1	protein_coding	-
chr1_121732858_121734626	chr1	121732858	121734626	ENSMUSG00000026384.7	Ptpn4	ENSMUST00000166422.1	nonsense_mediated_decay	-
chr1_121732858_121734626	chr1	121732858	121734626	ENSMUSG00000026384.7	Ptpn4	ENSMUST00000163435.1	protein_coding	-
chr1_121732858_121734626	chr1	121732858	121734626	ENSMUSG00000026384.7	Ptpn4	ENSMUST00000064091.5	protein_coding	-
chr1_121808761_121810504	chr1	121808761	121810504	ENSMUSG00000036975.5	Tmem177	ENSMUST00000037906.5	protein_coding	-
chr1_121882751_121883829	chr1	121882751	121883829	ENSMUSG00000092245.1	RP23-95F15.1	ENSMUST00000174509.1	processed_pseudogene	+
chr1_121893541_121894801	chr1	121893541	121894801	ENSMUSG00000036962.6	Gm101	ENSMUST00000174458.1	protein_coding	-
chr1_121893541_121894801	chr1	121893541	121894801	ENSMUSG00000036962.6	Gm101	ENSMUST00000174370.1	protein_coding	-
chr1_121969243_121972018	chr1	121969243	121972018	ENSMUSG00000050777.7	Tmem37	ENSMUST00000056089.7	protein_coding	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026388.9	3110009E18Rik	ENSMUST00000027637.6	protein_coding	+
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026388.9	3110009E18Rik	ENSMUST00000112644.2	protein_coding	+
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026388.9	3110009E18Rik	ENSMUST00000056038.8	protein_coding	+
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000149628.1	processed_transcript	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000135937.1	retained_intron	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000151708.1	protein_coding	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000128408.1	protein_coding	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000112648.1	protein_coding	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000132118.1	nonsense_mediated_decay	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000027634.6	protein_coding	-
chr1_122016537_122018591	chr1	122016537	122018591	ENSMUSG00000026385.9	Dbi	ENSMUST00000094616.4	protein_coding	-
chr1_122161087_122162634	chr1	122161087	122162634	ENSMUSG00000026389.10	Steap3	ENSMUST00000112640.1	protein_coding	-
chr1_122161087_122162634	chr1	122161087	122162634	ENSMUSG00000026389.10	Steap3	ENSMUST00000140490.1	protein_coding	-
chr1_122166228_122167275	chr1	122166228	122167275	ENSMUSG00000026389.10	Steap3	ENSMUST00000112639.1	protein_coding	-
chr1_122167602_122167826	chr1	122167602	122167826	ENSMUSG00000026389.10	Steap3	ENSMUST00000112641.1	protein_coding	-
chr1_122236848_122237720	chr1	122236848	122237720	ENSMUSG00000036907.8	C1ql2	ENSMUST00000037286.8	protein_coding	+
chr1_122401332_122401532	chr1	122401332	122401532	ENSMUSG00000026390.1	Marco	ENSMUST00000027639.1	protein_coding	-
chr1_122498675_122499170	chr1	122498675	122499170	ENSMUSG00000058665.7	En1	ENSMUST00000079721.7	protein_coding	+
chr1_122983530_122984246	chr1	122983530	122984246	ENSMUSG00000086664.2	B230209K01Rik	ENSMUST00000130015.1	lincRNA	+
chr1_122983530_122984246	chr1	122983530	122984246	ENSMUSG00000086664.2	B230209K01Rik	ENSMUST00000133823.1	lincRNA	+
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000161818.1	protein_coding	-
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000159125.1	protein_coding	-
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000162582.1	protein_coding	-
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000160688.1	protein_coding	-
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000159085.1	protein_coding	-
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000160968.1	protein_coding	-
chr1_123223582_123225163	chr1	123223582	123225163	ENSMUSG00000003721.8	Insig2	ENSMUST00000003818.7	protein_coding	-
chr1_123229025_123229474	chr1	123229025	123229474	ENSMUSG00000003721.8	Insig2	ENSMUST00000161068.1	protein_coding	-
chr1_123229025_123229474	chr1	123229025	123229474	ENSMUSG00000003721.8	Insig2	ENSMUST00000071064.6	protein_coding	-
chr1_123327220_123328874	chr1	123327220	123328874	ENSMUSG00000026339.12	Ccdc93	ENSMUST00000036025.9	protein_coding	+
chr1_123327220_123328874	chr1	123327220	123328874	ENSMUSG00000026339.12	Ccdc93	ENSMUST00000156459.1	retained_intron	+
chr1_123327220_123328874	chr1	123327220	123328874	ENSMUSG00000026339.12	Ccdc93	ENSMUST00000155673.1	processed_transcript	+
chr1_123327220_123328874	chr1	123327220	123328874	ENSMUSG00000026339.12	Ccdc93	ENSMUST00000128924.1	processed_transcript	+
chr1_123327220_123328874	chr1	123327220	123328874	ENSMUSG00000026339.12	Ccdc93	ENSMUST00000112621.1	protein_coding	+
chr1_123423558_123425391	chr1	123423558	123425391	ENSMUSG00000050534.8	Htr5b	ENSMUST00000055884.7	protein_coding	-
chr1_123463679_123464994	chr1	123463679	123464994	ENSMUSG00000001674.5	Ddx18	ENSMUST00000131471.1	processed_transcript	-
chr1_123463679_123464994	chr1	123463679	123464994	ENSMUSG00000001674.5	Ddx18	ENSMUST00000001724.5	protein_coding	-
chr1_125940034_125942921	chr1	125940034	125942921	ENSMUSG00000073586.4	Gm10543	ENSMUST00000097605.4	pseudogene	+
chr1_125940034_125942921	chr1	125940034	125942921	ENSMUSG00000036815.8	Dpp10	ENSMUST00000140361.1	nonsense_mediated_decay	-
chr1_125940034_125942921	chr1	125940034	125942921	ENSMUSG00000036815.8	Dpp10	ENSMUST00000112606.1	protein_coding	-
chr1_125940034_125942921	chr1	125940034	125942921	ENSMUSG00000036815.8	Dpp10	ENSMUST00000112603.1	protein_coding	-
chr1_125940034_125942921	chr1	125940034	125942921	ENSMUSG00000036815.8	Dpp10	ENSMUST00000035420.7	protein_coding	-
chr1_127330955_127332943	chr1	127330955	127332943	ENSMUSG00000026341.9	Actr3	ENSMUST00000027579.9	protein_coding	-
chr1_127456406_127458844	chr1	127456406	127458844	ENSMUSG00000026342.4	Slc35f5	ENSMUST00000027580.4	protein_coding	+
chr1_127572963_127574540	chr1	127572963	127574540	ENSMUSG00000026343.6	Gpr39	ENSMUST00000027581.6	protein_coding	+
chr1_127736305_127736560	chr1	127736305	127736560	ENSMUSG00000026343.6	Gpr39	ENSMUST00000159359.1	processed_transcript	+
chr1_127736566_127737050	chr1	127736566	127737050	ENSMUSG00000026343.6	Gpr39	ENSMUST00000159359.1	processed_transcript	+
chr1_127807085_127807401	chr1	127807085	127807401	ENSMUSG00000026344.3	Lypd1	ENSMUST00000159529.1	protein_coding	-
chr1_127807548_127809742	chr1	127807548	127809742	ENSMUSG00000026344.3	Lypd1	ENSMUST00000161361.1	protein_coding	-
chr1_127807548_127809742	chr1	127807548	127809742	ENSMUSG00000026344.3	Lypd1	ENSMUST00000159529.1	protein_coding	-
chr1_127807548_127809742	chr1	127807548	127809742	ENSMUSG00000026344.3	Lypd1	ENSMUST00000027582.3	protein_coding	-
chr1_127807548_127809742	chr1	127807548	127809742	ENSMUSG00000026344.3	Lypd1	ENSMUST00000162899.1	protein_coding	-
chr1_127807548_127809742	chr1	127807548	127809742	ENSMUSG00000026344.3	Lypd1	ENSMUST00000159417.1	protein_coding	-
chr1_128388608_128389613	chr1	128388608	128389613	ENSMUSG00000049690.8	Nckap5	ENSMUST00000162877.1	protein_coding	-
chr1_128388608_128389613	chr1	128388608	128389613	ENSMUSG00000049690.8	Nckap5	ENSMUST00000161954.1	protein_coding	-
chr1_128634216_128635196	chr1	128634216	128635196	ENSMUSG00000049690.8	Nckap5	ENSMUST00000162664.1	retained_intron	-
chr1_128634216_128635196	chr1	128634216	128635196	ENSMUSG00000049690.8	Nckap5	ENSMUST00000160693.1	protein_coding	-
chr1_128726400_128727630	chr1	128726400	128727630	ENSMUSG00000049690.8	Nckap5	ENSMUST00000162647.1	retained_intron	-
chr1_128726400_128727630	chr1	128726400	128727630	ENSMUSG00000049690.8	Nckap5	ENSMUST00000162646.1	protein_coding	-
chr1_128726400_128727630	chr1	128726400	128727630	ENSMUSG00000049690.8	Nckap5	ENSMUST00000112583.1	protein_coding	-
chr1_128726400_128727630	chr1	128726400	128727630	ENSMUSG00000049690.8	Nckap5	ENSMUST00000094609.3	protein_coding	-
chr1_129101153_129103398	chr1	129101153	129103398	ENSMUSG00000036155.7	Mgat5	ENSMUST00000038361.4	protein_coding	+
chr1_129202219_129204102	chr1	129202219	129204102	ENSMUSG00000036155.7	Mgat5	ENSMUST00000171405.1	protein_coding	+
chr1_129228205_129228444	chr1	129228205	129228444	ENSMUSG00000093146.1	AC131793.1	ENSMUST00000175405.1	snoRNA	+
chr1_129396644_129397832	chr1	129396644	129397832	ENSMUSG00000026347.7	Tmem163	ENSMUST00000160111.1	retained_intron	-
chr1_129433293_129434676	chr1	129433293	129434676	ENSMUSG00000026347.7	Tmem163	ENSMUST00000162406.1	processed_transcript	-
chr1_129573707_129575147	chr1	129573707	129575147	ENSMUSG00000026347.7	Tmem163	ENSMUST00000160616.1	protein_coding	-
chr1_129573707_129575147	chr1	129573707	129575147	ENSMUSG00000026347.7	Tmem163	ENSMUST00000027585.7	nonsense_mediated_decay	-
chr1_129625588_129626226	chr1	129625588	129626226	ENSMUSG00000026348.6	Acmsd	ENSMUST00000038006.6	protein_coding	+
chr1_129669940_129671539	chr1	129669940	129671539	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000027587.8	protein_coding	+
chr1_129669940_129671539	chr1	129669940	129671539	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000112570.1	protein_coding	+
chr1_129669940_129671539	chr1	129669940	129671539	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000149760.1	retained_intron	+
chr1_129669940_129671539	chr1	129669940	129671539	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000126850.1	retained_intron	+
chr1_129669940_129671539	chr1	129669940	129671539	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000125760.1	retained_intron	+
chr1_129669940_129671539	chr1	129669940	129671539	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000143513.1	retained_intron	+
chr1_129692651_129693723	chr1	129692651	129693723	ENSMUSG00000026349.8	Ccnt2	ENSMUST00000153359.1	processed_transcript	+
chr1_129764964_129766167	chr1	129764964	129766167	ENSMUSG00000036104.5	Rab3gap1	ENSMUST00000037649.5	protein_coding	+
chr1_129764964_129766167	chr1	129764964	129766167	ENSMUSG00000036104.5	Rab3gap1	ENSMUST00000142662.1	retained_intron	+
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000056211.6	R3hdm1	ENSMUST00000036288.4	protein_coding	+
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000056211.6	R3hdm1	ENSMUST00000170793.1	protein_coding	+
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000124876.1	processed_transcript	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000112538.1	protein_coding	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000127393.1	processed_transcript	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000097597.2	protein_coding	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000097598.3	protein_coding	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000037426.8	protein_coding	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000112539.1	protein_coding	-
chr1_129998860_130000601	chr1	129998860	130000601	ENSMUSG00000036086.9	Zranb3	ENSMUST00000086614.5	protein_coding	-
chr1_130140050_130141857	chr1	130140050	130141857	ENSMUSG00000026353.3	Ubxn4	ENSMUST00000027592.3	protein_coding	+
chr1_130255635_130257009	chr1	130255635	130257009	ENSMUSG00000026355.4	Mcm6	ENSMUST00000164171.1	protein_coding	-
chr1_130255635_130257009	chr1	130255635	130257009	ENSMUSG00000026355.4	Mcm6	ENSMUST00000027601.4	protein_coding	-
chr1_130313073_130314532	chr1	130313073	130314532	ENSMUSG00000026356.9	Dars	ENSMUST00000064309.7	protein_coding	-
chr1_130313073_130314532	chr1	130313073	130314532	ENSMUSG00000026356.9	Dars	ENSMUST00000027602.8	protein_coding	-
chr1_130487243_130490131	chr1	130487243	130490131	ENSMUSG00000045382.6	Cxcr4	ENSMUST00000142893.1	protein_coding	-
chr1_130487243_130490131	chr1	130487243	130490131	ENSMUSG00000045382.6	Cxcr4	ENSMUST00000052172.6	protein_coding	-
chr1_131169195_131171046	chr1	131169195	131171046	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000148051.1	retained_intron	+
chr1_131169195_131171046	chr1	131169195	131171046	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000073527.6	protein_coding	+
chr1_131169195_131171046	chr1	131169195	131171046	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000040311.7	protein_coding	+
chr1_131169195_131171046	chr1	131169195	131171046	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000140629.1	processed_transcript	+
chr1_131698301_131698597	chr1	131698301	131698597	ENSMUSG00000066956.1	Gm10191	ENSMUST00000086596.1	transcribed_processed_pseudogene	-
chr1_131812104_131812427	chr1	131812104	131812427	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000151700.1	processed_transcript	+
chr1_132060304_132060642	chr1	132060304	132060642	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000140834.1	processed_transcript	+
chr1_132060304_132060642	chr1	132060304	132060642	ENSMUSG00000042581.8	Thsd7b	ENSMUST00000143130.1	processed_transcript	+
chr1_132319098_132320016	chr1	132319098	132320016	ENSMUSG00000087691.1	Gm15674	ENSMUST00000143266.1	antisense	+
chr1_132319098_132320016	chr1	132319098	132320016	ENSMUSG00000026401.8	Daf2	ENSMUST00000136497.1	processed_transcript	-
chr1_132319098_132320016	chr1	132319098	132320016	ENSMUSG00000026401.8	Daf2	ENSMUST00000112488.2	protein_coding	-
chr1_132319098_132320016	chr1	132319098	132320016	ENSMUSG00000026401.8	Daf2	ENSMUST00000119432.1	protein_coding	-
chr1_132319098_132320016	chr1	132319098	132320016	ENSMUSG00000026401.8	Daf2	ENSMUST00000027654.6	protein_coding	-
chr1_132358561_132359923	chr1	132358561	132359923	ENSMUSG00000085526.1	Gm16083	ENSMUST00000125681.1	processed_transcript	+
chr1_132358561_132359923	chr1	132358561	132359923	ENSMUSG00000026399.6	Cd55	ENSMUST00000133057.1	processed_transcript	-
chr1_132358561_132359923	chr1	132358561	132359923	ENSMUSG00000026399.6	Cd55	ENSMUST00000140725.1	retained_intron	-
chr1_132358561_132359923	chr1	132358561	132359923	ENSMUSG00000026399.6	Cd55	ENSMUST00000027650.6	protein_coding	-
chr1_132526024_132526319	chr1	132526024	132526319	ENSMUSG00000042554.4	Zp3r	ENSMUST00000142416.1	protein_coding	-
chr1_132526024_132526319	chr1	132526024	132526319	ENSMUSG00000042554.4	Zp3r	ENSMUST00000039862.4	protein_coding	-
chr1_132526024_132526319	chr1	132526024	132526319	ENSMUSG00000042554.4	Zp3r	ENSMUST00000128128.1	protein_coding	-
chr1_132557899_132558675	chr1	132557899	132558675	ENSMUSG00000026405.8	C4bp	ENSMUST00000137276.2	protein_coding	-
chr1_132557899_132558675	chr1	132557899	132558675	ENSMUSG00000026405.8	C4bp	ENSMUST00000027657.7	protein_coding	-
chr1_132611812_132614560	chr1	132611812	132614560	ENSMUSG00000046404.4	Yod1	ENSMUST00000049813.4	protein_coding	+
chr1_132611812_132614560	chr1	132611812	132614560	ENSMUSG00000026409.7	Pfkfb2	ENSMUST00000050406.4	protein_coding	-
chr1_132611812_132614560	chr1	132611812	132614560	ENSMUSG00000026409.7	Pfkfb2	ENSMUST00000066863.6	protein_coding	-
chr1_132624931_132625667	chr1	132624931	132625667	ENSMUSG00000026409.7	Pfkfb2	ENSMUST00000171479.1	protein_coding	-
chr1_132626001_132626356	chr1	132626001	132626356	ENSMUSG00000026409.7	Pfkfb2	ENSMUST00000171479.1	protein_coding	-
chr1_132628231_132628917	chr1	132628231	132628917	ENSMUSG00000042510.6	AA986860	ENSMUST00000039323.6	protein_coding	+
chr1_132716307_132719513	chr1	132716307	132719513	ENSMUSG00000086706.1	Gm15848	ENSMUST00000136015.1	antisense	-
chr1_132716307_132719513	chr1	132716307	132719513	ENSMUSG00000086706.1	Gm15848	ENSMUST00000122968.1	antisense	-
chr1_132723061_132723617	chr1	132723061	132723617	ENSMUSG00000026417.7	Pigr	ENSMUST00000027675.7	protein_coding	+
chr1_132723061_132723617	chr1	132723061	132723617	ENSMUSG00000026417.7	Pigr	ENSMUST00000133792.1	protein_coding	+
chr1_132725228_132725690	chr1	132725228	132725690	ENSMUSG00000026417.7	Pigr	ENSMUST00000137782.1	protein_coding	+
chr1_132760451_132762704	chr1	132760451	132762704	ENSMUSG00000042474.5	Faim3	ENSMUST00000038829.5	protein_coding	+
chr1_132760451_132762704	chr1	132760451	132762704	ENSMUSG00000042474.5	Faim3	ENSMUST00000149355.1	processed_transcript	+
chr1_132774515_132775230	chr1	132774515	132775230	ENSMUSG00000042474.5	Faim3	ENSMUST00000126821.1	processed_transcript	+
chr1_132774515_132775230	chr1	132774515	132775230	ENSMUSG00000042474.5	Faim3	ENSMUST00000145446.1	processed_transcript	+
chr1_132992127_132994785	chr1	132992127	132994785	ENSMUSG00000016528.3	Mapkapk2	ENSMUST00000016672.3	protein_coding	-
chr1_133034294_133036257	chr1	133034294	133036257	ENSMUSG00000016526.7	Dyrk3	ENSMUST00000016670.7	protein_coding	-
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000112446.2	protein_coding	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000139468.1	retained_intron	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000149119.1	nonsense_mediated_decay	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000151874.1	nonsense_mediated_decay	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000068791.4	protein_coding	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000068805.7	protein_coding	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000131855.1	nonsense_mediated_decay	+
chr1_133049490_133050480	chr1	133049490	133050480	ENSMUSG00000026427.9	Eif2d	ENSMUST00000086578.4	protein_coding	+
chr1_133094966_133097197	chr1	133094966	133097197	ENSMUSG00000026430.9	Rassf5	ENSMUST00000068564.8	protein_coding	-
chr1_133140972_133143303	chr1	133140972	133143303	ENSMUSG00000026430.9	Rassf5	ENSMUST00000124796.1	processed_transcript	-
chr1_133140972_133143303	chr1	133140972	133143303	ENSMUSG00000026430.9	Rassf5	ENSMUST00000027688.8	protein_coding	-
chr1_133140972_133143303	chr1	133140972	133143303	ENSMUSG00000026430.9	Rassf5	ENSMUST00000112442.1	protein_coding	-
chr1_133166341_133167650	chr1	133166341	133167650	ENSMUSG00000042349.7	Ikbke	ENSMUST00000163029.1	retained_intron	-
chr1_133171294_133173131	chr1	133171294	133173131	ENSMUSG00000042349.7	Ikbke	ENSMUST00000159195.1	protein_coding	-
chr1_133173427_133173892	chr1	133173427	133173892	ENSMUSG00000042349.7	Ikbke	ENSMUST00000159195.1	protein_coding	-
chr1_133173427_133173892	chr1	133173427	133173892	ENSMUSG00000042349.7	Ikbke	ENSMUST00000161764.1	protein_coding	-
chr1_133174965_133177194	chr1	133174965	133177194	ENSMUSG00000042349.7	Ikbke	ENSMUST00000062108.3	protein_coding	-
chr1_133422892_133425083	chr1	133422892	133425083	ENSMUSG00000055184.4	Fam72a	ENSMUST00000068613.4	protein_coding	+
chr1_133422892_133425083	chr1	133422892	133425083	ENSMUSG00000026425.8	Srgap2	ENSMUST00000097588.2	protein_coding	-
chr1_133534363_133535950	chr1	133534363	133535950	ENSMUSG00000004552.10	Ctse	ENSMUST00000073350.6	protein_coding	+
chr1_133534363_133535950	chr1	133534363	133535950	ENSMUSG00000004552.10	Ctse	ENSMUST00000112411.1	protein_coding	+
chr1_133558250_133558668	chr1	133558250	133558668	ENSMUSG00000004552.10	Ctse	ENSMUST00000141061.1	retained_intron	+
chr1_133585031_133585521	chr1	133585031	133585521	ENSMUSG00000052688.6	5430435G22Rik	ENSMUST00000064679.2	protein_coding	+
chr1_133585031_133585521	chr1	133585031	133585521	ENSMUSG00000052688.6	5430435G22Rik	ENSMUST00000064664.3	protein_coding	+
chr1_133585031_133585521	chr1	133585031	133585521	ENSMUSG00000052688.6	5430435G22Rik	ENSMUST00000136247.1	protein_coding	+
chr1_133585031_133585521	chr1	133585031	133585521	ENSMUSG00000052688.6	5430435G22Rik	ENSMUST00000129905.1	protein_coding	+
chr1_133592879_133593609	chr1	133592879	133593609	ENSMUSG00000052688.6	5430435G22Rik	ENSMUST00000130848.1	processed_transcript	+
chr1_133693483_133694614	chr1	133693483	133694614	ENSMUSG00000042251.6	Pm20d1	ENSMUST00000112393.2	protein_coding	+
chr1_133693483_133694614	chr1	133693483	133694614	ENSMUSG00000042251.6	Pm20d1	ENSMUST00000048660.5	protein_coding	+
chr1_133723079_133725532	chr1	133723079	133725532	ENSMUSG00000013275.9	Slc41a1	ENSMUST00000132585.1	processed_transcript	+
chr1_133723079_133725532	chr1	133723079	133725532	ENSMUSG00000013275.9	Slc41a1	ENSMUST00000086559.6	protein_coding	+
chr1_133738756_133739534	chr1	133738756	133739534	ENSMUSG00000013275.9	Slc41a1	ENSMUST00000146360.1	retained_intron	+
chr1_133762976_133765011	chr1	133762976	133765011	ENSMUSG00000026433.7	Rab7l1	ENSMUST00000112386.1	protein_coding	+
chr1_133762976_133765011	chr1	133762976	133765011	ENSMUSG00000026433.7	Rab7l1	ENSMUST00000027693.7	protein_coding	+
chr1_133762976_133765011	chr1	133762976	133765011	ENSMUSG00000026433.7	Rab7l1	ENSMUST00000125925.1	nonsense_mediated_decay	+
chr1_133806492_133808318	chr1	133806492	133808318	ENSMUSG00000026434.6	Nucks1	ENSMUST00000062264.6	protein_coding	+
chr1_133866902_133867935	chr1	133866902	133867935	ENSMUSG00000026435.8	Slc45a3	ENSMUST00000027695.6	protein_coding	+
chr1_133903201_133905362	chr1	133903201	133905362	ENSMUSG00000026436.9	Elk4	ENSMUST00000086556.5	protein_coding	+
chr1_133903201_133905362	chr1	133903201	133905362	ENSMUSG00000026436.9	Elk4	ENSMUST00000027696.3	protein_coding	+
chr1_133903201_133905362	chr1	133903201	133905362	ENSMUSG00000026436.9	Elk4	ENSMUST00000146188.1	processed_transcript	+
chr1_133903201_133905362	chr1	133903201	133905362	ENSMUSG00000026436.9	Elk4	ENSMUST00000124579.1	processed_transcript	+
chr1_133903201_133905362	chr1	133903201	133905362	ENSMUSG00000026436.9	Elk4	ENSMUST00000146432.1	protein_coding	+
chr1_133942616_133943487	chr1	133942616	133943487	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000159382.1	retained_intron	-
chr1_133950920_133951319	chr1	133950920	133951319	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000162628.1	nonsense_mediated_decay	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000161864.1	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000112365.2	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000159038.1	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000086547.4	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000046658.3	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000146267.1	nonsense_mediated_decay	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000160656.1	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000144548.2	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000112370.2	protein_coding	-
chr1_133963392_133965095	chr1	133963392	133965095	ENSMUSG00000059149.10	Mfsd4	ENSMUST00000126927.1	protein_coding	-
chr1_134034542_134036687	chr1	134034542	134036687	ENSMUSG00000026437.5	Cdk18	ENSMUST00000112362.2	protein_coding	-
chr1_134034542_134036687	chr1	134034542	134036687	ENSMUSG00000026437.5	Cdk18	ENSMUST00000027697.5	protein_coding	-
chr1_134087253_134088746	chr1	134087253	134088746	ENSMUSG00000079330.2	Lemd1	ENSMUST00000112357.2	protein_coding	+
chr1_134194428_134196663	chr1	134194428	134196663	ENSMUSG00000042115.4	Klhdc8a	ENSMUST00000046071.4	protein_coding	+
chr1_134212299_134214551	chr1	134212299	134214551	ENSMUSG00000009772.9	Nuak2	ENSMUST00000082125.5	protein_coding	+
chr1_134212299_134214551	chr1	134212299	134214551	ENSMUSG00000009772.9	Nuak2	ENSMUST00000072177.7	protein_coding	+
chr1_134212299_134214551	chr1	134212299	134214551	ENSMUSG00000009772.9	Nuak2	ENSMUST00000128661.1	processed_transcript	+
chr1_134224235_134224435	chr1	134224235	134224435	ENSMUSG00000009772.9	Nuak2	ENSMUST00000133246.1	retained_intron	+
chr1_134260563_134262057	chr1	134260563	134262057	ENSMUSG00000042066.9	Tmcc2	ENSMUST00000125439.1	processed_transcript	-
chr1_134263955_134264842	chr1	134263955	134264842	ENSMUSG00000042066.9	Tmcc2	ENSMUST00000142609.1	protein_coding	-
chr1_134263955_134264842	chr1	134263955	134264842	ENSMUSG00000042066.9	Tmcc2	ENSMUST00000138717.1	retained_intron	-
chr1_134286484_134288846	chr1	134286484	134288846	ENSMUSG00000042066.9	Tmcc2	ENSMUST00000132435.1	protein_coding	-
chr1_134286484_134288846	chr1	134286484	134288846	ENSMUSG00000042066.9	Tmcc2	ENSMUST00000045473.9	protein_coding	-
chr1_134312877_134314888	chr1	134312877	134314888	ENSMUSG00000042046.8	Dstyk	ENSMUST00000045110.7	protein_coding	+
chr1_134312877_134314888	chr1	134312877	134314888	ENSMUSG00000042046.8	Dstyk	ENSMUST00000168349.1	protein_coding	+
chr1_134312877_134314888	chr1	134312877	134314888	ENSMUSG00000042046.8	Dstyk	ENSMUST00000169549.1	protein_coding	+
chr1_134373111_134374502	chr1	134373111	134374502	ENSMUSG00000026439.8	Rbbp5	ENSMUST00000027700.8	protein_coding	+
chr1_134373111_134374502	chr1	134373111	134374502	ENSMUSG00000090678.1	6030442K20Rik	ENSMUST00000171507.1	lincRNA	-
chr1_134401582_134403019	chr1	134401582	134403019	ENSMUSG00000048174.1	Tmem81	ENSMUST00000058167.1	protein_coding	+
chr1_134438399_134440066	chr1	134438399	134440066	ENSMUSG00000053024.7	Cntn2	ENSMUST00000086522.5	protein_coding	-
chr1_134438399_134440066	chr1	134438399	134440066	ENSMUSG00000053024.7	Cntn2	ENSMUST00000086521.4	protein_coding	-
chr1_134603751_134604443	chr1	134603751	134604443	ENSMUSG00000026442.8	Nfasc	ENSMUST00000043189.7	protein_coding	-
chr1_134637195_134638653	chr1	134637195	134638653	ENSMUSG00000026442.8	Nfasc	ENSMUST00000094569.4	protein_coding	-
chr1_134637195_134638653	chr1	134637195	134638653	ENSMUSG00000026442.8	Nfasc	ENSMUST00000163770.1	protein_coding	-
chr1_134776387_134778655	chr1	134776387	134778655	ENSMUSG00000026443.3	Lrrn2	ENSMUST00000027706.3	protein_coding	+
chr1_134776387_134778655	chr1	134776387	134778655	ENSMUSG00000026443.3	Lrrn2	ENSMUST00000159088.1	processed_transcript	+
chr1_134921423_134922645	chr1	134921423	134922645	ENSMUSG00000054387.6	Mdm4	ENSMUST00000067398.6	protein_coding	-
chr1_134921423_134922645	chr1	134921423	134922645	ENSMUSG00000054387.6	Mdm4	ENSMUST00000067429.3	protein_coding	-
chr1_134921423_134922645	chr1	134921423	134922645	ENSMUSG00000054387.6	Mdm4	ENSMUST00000112313.1	protein_coding	-
chr1_134941437_134943805	chr1	134941437	134943805	ENSMUSG00000026447.10	Pik3c2b	ENSMUST00000153707.1	protein_coding	+
chr1_134941437_134943805	chr1	134941437	134943805	ENSMUSG00000026447.10	Pik3c2b	ENSMUST00000077730.5	protein_coding	+
chr1_134941437_134943805	chr1	134941437	134943805	ENSMUSG00000026447.10	Pik3c2b	ENSMUST00000124934.1	retained_intron	+
chr1_134941437_134943805	chr1	134941437	134943805	ENSMUSG00000026447.10	Pik3c2b	ENSMUST00000145153.1	retained_intron	+
chr1_135027124_135028971	chr1	135027124	135028971	ENSMUSG00000046062.4	Ppp1r15b	ENSMUST00000052529.3	protein_coding	+
chr1_135027124_135028971	chr1	135027124	135028971	ENSMUSG00000046062.4	Ppp1r15b	ENSMUST00000122956.1	processed_transcript	+
chr1_135027124_135028971	chr1	135027124	135028971	ENSMUSG00000046062.4	Ppp1r15b	ENSMUST00000165011.1	protein_coding	+
chr1_135141038_135144404	chr1	135141038	135144404	ENSMUSG00000041757.8	Plekha6	ENSMUST00000038295.8	protein_coding	+
chr1_135141038_135144404	chr1	135141038	135144404	ENSMUSG00000041757.8	Plekha6	ENSMUST00000105082.2	protein_coding	+
chr1_135141038_135144404	chr1	135141038	135144404	ENSMUSG00000041757.8	Plekha6	ENSMUST00000086504.5	protein_coding	+
chr1_135205990_135207392	chr1	135205990	135207392	ENSMUSG00000041717.8	Golt1a	ENSMUST00000094557.3	protein_coding	+
chr1_135248399_135248748	chr1	135248399	135248748	ENSMUSG00000070645.4	Ren1	ENSMUST00000112287.1	protein_coding	+
chr1_135258251_135261138	chr1	135258251	135261138	ENSMUSG00000070644.7	Etnk2	ENSMUST00000135222.2	protein_coding	+
chr1_135258251_135261138	chr1	135258251	135261138	ENSMUSG00000070644.7	Etnk2	ENSMUST00000147909.1	retained_intron	+
chr1_135281929_135282805	chr1	135281929	135282805	ENSMUSG00000070643.5	Sox13	ENSMUST00000145922.1	retained_intron	-
chr1_135319798_135321197	chr1	135319798	135321197	ENSMUSG00000070643.5	Sox13	ENSMUST00000153799.1	protein_coding	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000092104.1	Gm17713	ENSMUST00000107652.2	lincRNA	+
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000164574.1	protein_coding	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000171264.1	protein_coding	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000172087.1	nonsense_mediated_decay	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000164096.1	protein_coding	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000172079.1	nonsense_mediated_decay	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000166291.1	protein_coding	-
chr1_135506270_135507543	chr1	135506270	135507543	ENSMUSG00000090553.1	Snrpe	ENSMUST00000166915.1	protein_coding	-
chr1_135557043_135558422	chr1	135557043	135558422	ENSMUSG00000026464.6	Zc3h11a	ENSMUST00000027736.6	protein_coding	-
chr1_135585890_135587176	chr1	135585890	135587176	ENSMUSG00000051998.7	Lax1	ENSMUST00000169295.1	protein_coding	-
chr1_135585890_135587176	chr1	135585890	135587176	ENSMUSG00000051998.7	Lax1	ENSMUST00000063620.7	protein_coding	-
chr1_135598460_135598969	chr1	135598460	135598969	ENSMUSG00000091176.1	Gm17678	ENSMUST00000167348.1	protein_coding	-
chr1_135649609_135649882	chr1	135649609	135649882	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000112264.1	protein_coding	-
chr1_135649609_135649882	chr1	135649609	135649882	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000048953.6	protein_coding	-
chr1_135649954_135650269	chr1	135649954	135650269	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000112264.1	protein_coding	-
chr1_135649954_135650269	chr1	135649954	135650269	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000048953.6	protein_coding	-
chr1_135649954_135650269	chr1	135649954	135650269	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000125659.1	protein_coding	-
chr1_135649954_135650269	chr1	135649954	135650269	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000165602.1	protein_coding	-
chr1_135697112_135698607	chr1	135697112	135698607	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000128692.1	processed_transcript	-
chr1_135697112_135698607	chr1	135697112	135698607	ENSMUSG00000026463.10	Atp2b4	ENSMUST00000143567.1	protein_coding	-
chr1_135797480_135797814	chr1	135797480	135797814	ENSMUSG00000010311.8	Optc	ENSMUST00000124245.1	retained_intron	-
chr1_135804304_135806136	chr1	135804304	135806136	ENSMUSG00000010311.8	Optc	ENSMUST00000153617.1	protein_coding	-
chr1_135817833_135818422	chr1	135817833	135818422	ENSMUSG00000041577.5	Prelp	ENSMUST00000127583.1	processed_transcript	-
chr1_135817833_135818422	chr1	135817833	135818422	ENSMUSG00000041577.5	Prelp	ENSMUST00000048432.5	protein_coding	-
chr1_135933638_135934188	chr1	135933638	135934188	ENSMUSG00000041559.7	Fmod	ENSMUST00000048183.7	protein_coding	+
chr1_135933638_135934188	chr1	135933638	135934188	ENSMUSG00000041559.7	Fmod	ENSMUST00000162779.1	protein_coding	+
chr1_135973880_135976665	chr1	135973880	135976665	ENSMUSG00000020423.6	Btg2	ENSMUST00000020692.6	protein_coding	-
chr1_136007609_136007913	chr1	136007609	136007913	ENSMUSG00000026450.7	Chit1	ENSMUST00000159963.1	protein_coding	+
chr1_136007609_136007913	chr1	136007609	136007913	ENSMUSG00000026450.7	Chit1	ENSMUST00000160060.1	protein_coding	+
chr1_136078131_136079159	chr1	136078131	136079159	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000156873.1	protein_coding	+
chr1_136078131_136079159	chr1	136078131	136079159	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000153856.1	protein_coding	+
chr1_136078131_136079159	chr1	136078131	136079159	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000082060.3	protein_coding	+
chr1_136078131_136079159	chr1	136078131	136079159	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000133701.1	protein_coding	+
chr1_136078131_136079159	chr1	136078131	136079159	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000132873.1	protein_coding	+
chr1_136078131_136079159	chr1	136078131	136079159	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000139254.1	retained_intron	+
chr1_136079953_136080220	chr1	136079953	136080220	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000144819.1	retained_intron	+
chr1_136085525_136086125	chr1	136085525	136086125	ENSMUSG00000064246.4	Chi3l1	ENSMUST00000134812.1	retained_intron	+
chr1_136129088_136132027	chr1	136129088	136132027	ENSMUSG00000042429.7	Adora1	ENSMUST00000086465.4	protein_coding	-
chr1_136129088_136132027	chr1	136129088	136132027	ENSMUSG00000042429.7	Adora1	ENSMUST00000038191.6	protein_coding	-
chr1_136129088_136132027	chr1	136129088	136132027	ENSMUSG00000042429.7	Adora1	ENSMUST00000169927.1	protein_coding	-
chr1_136132106_136132751	chr1	136132106	136132751	ENSMUSG00000042429.7	Adora1	ENSMUST00000086465.4	protein_coding	-
chr1_136132106_136132751	chr1	136132106	136132751	ENSMUSG00000042429.7	Adora1	ENSMUST00000038191.6	protein_coding	-
chr1_136228331_136229939	chr1	136228331	136229939	ENSMUSG00000026458.6	Ppfia4	ENSMUST00000027729.6	protein_coding	-
chr1_136228331_136229939	chr1	136228331	136229939	ENSMUSG00000026458.6	Ppfia4	ENSMUST00000168515.1	protein_coding	-
chr1_136257761_136259356	chr1	136257761	136259356	ENSMUSG00000042305.6	Tmem183a	ENSMUST00000049470.4	protein_coding	-
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000154237.1	nonsense_mediated_decay	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000027726.7	protein_coding	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000049223.6	protein_coding	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000174315.1	processed_transcript	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000130836.1	processed_transcript	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000173908.1	protein_coding	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000172496.1	retained_intron	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000133686.1	retained_intron	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000127412.2	nonsense_mediated_decay	+
chr1_136301854_136303384	chr1	136301854	136303384	ENSMUSG00000026456.11	Cyb5r1	ENSMUST00000172795.1	nonsense_mediated_decay	+
chr1_136310636_136312685	chr1	136310636	136312685	ENSMUSG00000026457.8	Adipor1	ENSMUST00000027727.8	protein_coding	+
chr1_136310636_136312685	chr1	136310636	136312685	ENSMUSG00000026457.8	Adipor1	ENSMUST00000112237.1	protein_coding	+
chr1_136310636_136312685	chr1	136310636	136312685	ENSMUSG00000026457.8	Adipor1	ENSMUST00000156433.1	processed_transcript	+
chr1_136310636_136312685	chr1	136310636	136312685	ENSMUSG00000026457.8	Adipor1	ENSMUST00000148822.1	retained_intron	+
chr1_136351337_136352810	chr1	136351337	136352810	ENSMUSG00000026455.8	Klhl12	ENSMUST00000133721.1	retained_intron	+
chr1_136351337_136352810	chr1	136351337	136352810	ENSMUSG00000026455.8	Klhl12	ENSMUST00000112232.1	protein_coding	+
chr1_136351337_136352810	chr1	136351337	136352810	ENSMUSG00000026455.8	Klhl12	ENSMUST00000027725.4	protein_coding	+
chr1_136351337_136352810	chr1	136351337	136352810	ENSMUSG00000026455.8	Klhl12	ENSMUST00000116528.1	protein_coding	+
chr1_136390609_136392924	chr1	136390609	136392924	ENSMUSG00000042229.7	Rabif	ENSMUST00000097568.3	protein_coding	+
chr1_136390609_136392924	chr1	136390609	136392924	ENSMUSG00000042229.7	Rabif	ENSMUST00000047978.6	protein_coding	+
chr1_136446377_136446620	chr1	136446377	136446620	ENSMUSG00000046367.8	4931440L10Rik	ENSMUST00000172898.1	protein_coding	-
chr1_136456266_136457658	chr1	136456266	136457658	ENSMUSG00000042207.10	Kdm5b	ENSMUST00000047714.7	protein_coding	+
chr1_136456266_136457658	chr1	136456266	136457658	ENSMUSG00000042207.10	Kdm5b	ENSMUST00000163900.1	protein_coding	+
chr1_136456266_136457658	chr1	136456266	136457658	ENSMUSG00000042207.10	Kdm5b	ENSMUST00000112198.1	protein_coding	+
chr1_136456266_136457658	chr1	136456266	136457658	ENSMUSG00000042207.10	Kdm5b	ENSMUST00000112197.1	protein_coding	+
chr1_136542423_136543360	chr1	136542423	136543360	ENSMUSG00000091246.1	Gm3834	ENSMUST00000164329.1	lincRNA	-
chr1_136604878_136607034	chr1	136604878	136607034	ENSMUSG00000026452.9	Syt2	ENSMUST00000121990.1	protein_coding	+
chr1_136699671_136701391	chr1	136699671	136701391	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000141419.1	retained_intron	-
chr1_136731964_136732516	chr1	136731964	136732516	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000146639.1	processed_transcript	-
chr1_136742486_136744964	chr1	136742486	136744964	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000156348.1	protein_coding	-
chr1_136851207_136852922	chr1	136851207	136852922	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000112166.1	protein_coding	-
chr1_136851207_136852922	chr1	136851207	136852922	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000112163.1	protein_coding	-
chr1_136851207_136852922	chr1	136851207	136852922	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000132025.1	processed_transcript	-
chr1_136851207_136852922	chr1	136851207	136852922	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000086444.4	protein_coding	-
chr1_136851207_136852922	chr1	136851207	136852922	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000168381.1	protein_coding	-
chr1_136851207_136852922	chr1	136851207	136852922	ENSMUSG00000073557.4	Ppp1r12b	ENSMUST00000045665.6	protein_coding	-
chr1_136858674_136859901	chr1	136858674	136859901	ENSMUSG00000026429.7	Ube2t	ENSMUST00000027687.7	protein_coding	+
chr1_136914039_136914637	chr1	136914039	136914637	ENSMUSG00000042793.7	Lgr6	ENSMUST00000137968.1	protein_coding	-
chr1_137001580_137001915	chr1	137001580	137001915	ENSMUSG00000042793.7	Lgr6	ENSMUST00000044828.7	protein_coding	-
chr1_137008795_137009018	chr1	137008795	137009018	ENSMUSG00000066885.5	Ptprv	ENSMUST00000086432.5	protein_coding	-
chr1_137009078_137009768	chr1	137009078	137009768	ENSMUSG00000066885.5	Ptprv	ENSMUST00000086432.5	protein_coding	-
chr1_137028638_137030151	chr1	137028638	137030151	ENSMUSG00000031506.5	Ptpn7	ENSMUST00000049449.4	protein_coding	+
chr1_137028638_137030151	chr1	137028638	137030151	ENSMUSG00000031506.5	Ptpn7	ENSMUST00000167080.1	protein_coding	+
chr1_137042577_137044667	chr1	137042577	137044667	ENSMUSG00000026426.4	Arl8a	ENSMUST00000027684.4	protein_coding	+
chr1_137042577_137044667	chr1	137042577	137044667	ENSMUSG00000026426.4	Arl8a	ENSMUST00000125774.1	protein_coding	+
chr1_137050587_137051619	chr1	137050587	137051619	ENSMUSG00000026426.4	Arl8a	ENSMUST00000141177.1	retained_intron	+
chr1_137064013_137064433	chr1	137064013	137064433	ENSMUSG00000026424.8	Gpr37l1	ENSMUST00000027682.8	protein_coding	-
chr1_137144795_137145863	chr1	137144795	137145863	ENSMUSG00000085392.1	Gm16606	ENSMUST00000140839.1	lincRNA	+
chr1_137154744_137156194	chr1	137154744	137156194	ENSMUSG00000003051.7	Elf3	ENSMUST00000003135.7	protein_coding	-
chr1_137167715_137168685	chr1	137167715	137168685	ENSMUSG00000041926.9	Rnpep	ENSMUST00000130069.1	processed_transcript	-
chr1_137175362_137175636	chr1	137175362	137175636	ENSMUSG00000041926.9	Rnpep	ENSMUST00000152169.1	processed_transcript	-
chr1_137178470_137181192	chr1	137178470	137181192	ENSMUSG00000041926.9	Rnpep	ENSMUST00000077340.7	protein_coding	-
chr1_137178470_137181192	chr1	137178470	137181192	ENSMUSG00000041926.9	Rnpep	ENSMUST00000074357.7	protein_coding	-
chr1_137207875_137208490	chr1	137207875	137208490	ENSMUSG00000062580.3	Timm17a	ENSMUST00000125454.1	protein_coding	-
chr1_137209626_137210776	chr1	137209626	137210776	ENSMUSG00000062580.3	Timm17a	ENSMUST00000134088.1	protein_coding	-
chr1_137209626_137210776	chr1	137209626	137210776	ENSMUSG00000062580.3	Timm17a	ENSMUST00000081104.3	protein_coding	-
chr1_137221085_137221484	chr1	137221085	137221484	ENSMUSG00000048096.6	Lmod1	ENSMUST00000059352.2	protein_coding	+
chr1_137221085_137221484	chr1	137221085	137221484	ENSMUSG00000048096.6	Lmod1	ENSMUST00000171386.1	protein_coding	+
chr1_137269561_137270111	chr1	137269561	137270111	ENSMUSG00000041889.7	Shisa4	ENSMUST00000159918.1	retained_intron	-
chr1_137270654_137272301	chr1	137270654	137272301	ENSMUSG00000041889.7	Shisa4	ENSMUST00000159181.1	retained_intron	-
chr1_137270654_137272301	chr1	137270654	137272301	ENSMUSG00000041889.7	Shisa4	ENSMUST00000041240.3	protein_coding	-
chr1_137326336_137327699	chr1	137326336	137327699	ENSMUSG00000041879.7	Ipo9	ENSMUST00000159173.1	nonsense_mediated_decay	-
chr1_137326336_137327699	chr1	137326336	137327699	ENSMUSG00000041879.7	Ipo9	ENSMUST00000161838.1	nonsense_mediated_decay	-
chr1_137326336_137327699	chr1	137326336	137327699	ENSMUSG00000041879.7	Ipo9	ENSMUST00000161189.1	nonsense_mediated_decay	-
chr1_137326336_137327699	chr1	137326336	137327699	ENSMUSG00000041879.7	Ipo9	ENSMUST00000161032.1	nonsense_mediated_decay	-
chr1_137326336_137327699	chr1	137326336	137327699	ENSMUSG00000041879.7	Ipo9	ENSMUST00000041023.7	protein_coding	-
chr1_137481306_137482046	chr1	137481306	137482046	ENSMUSG00000054412.4	Gm4793	ENSMUST00000067468.4	protein_coding	+
chr1_137481306_137482046	chr1	137481306	137482046	ENSMUSG00000009418.8	Nav1	ENSMUST00000040599.7	protein_coding	-
chr1_137481306_137482046	chr1	137481306	137482046	ENSMUSG00000009418.8	Nav1	ENSMUST00000067414.5	protein_coding	-
chr1_137583195_137585613	chr1	137583195	137585613	ENSMUSG00000090399.1	Nav1	ENSMUST00000112103.1	protein_coding	-
chr1_137616073_137616953	chr1	137616073	137616953	ENSMUSG00000026421.8	Csrp1	ENSMUST00000097561.2	protein_coding	+
chr1_137625142_137626603	chr1	137625142	137626603	ENSMUSG00000026421.8	Csrp1	ENSMUST00000027677.7	protein_coding	+
chr1_137661993_137664129	chr1	137661993	137664129	ENSMUSG00000041801.5	Phlda3	ENSMUST00000038945.5	protein_coding	+
chr1_137661993_137664129	chr1	137661993	137664129	ENSMUSG00000041801.5	Phlda3	ENSMUST00000136445.1	processed_transcript	+
chr1_137679374_137679921	chr1	137679374	137679921	ENSMUSG00000026418.10	Tnni1	ENSMUST00000132795.1	protein_coding	+
chr1_137714943_137715660	chr1	137714943	137715660	ENSMUSG00000041782.8	Lad1	ENSMUST00000038760.8	protein_coding	+
chr1_137737152_137737718	chr1	137737152	137737718	ENSMUSG00000026414.6	Tnnt2	ENSMUST00000112087.1	protein_coding	+
chr1_137737152_137737718	chr1	137737152	137737718	ENSMUSG00000026414.6	Tnnt2	ENSMUST00000112086.1	protein_coding	+
chr1_137737152_137737718	chr1	137737152	137737718	ENSMUSG00000026414.6	Tnnt2	ENSMUST00000112085.1	protein_coding	+
chr1_137737152_137737718	chr1	137737152	137737718	ENSMUSG00000026414.6	Tnnt2	ENSMUST00000027671.5	protein_coding	+
chr1_137815300_137816080	chr1	137815300	137816080	ENSMUSG00000026413.6	Pkp1	ENSMUST00000163260.1	protein_coding	-
chr1_137815300_137816080	chr1	137815300	137816080	ENSMUSG00000026413.6	Pkp1	ENSMUST00000027667.6	protein_coding	-
chr1_137854816_137855782	chr1	137854816	137855782	ENSMUSG00000051985.5	Igfn1	ENSMUST00000129302.1	protein_coding	-
chr1_137903731_137905084	chr1	137903731	137905084	ENSMUSG00000026411.11	Tmem9	ENSMUST00000165125.1	protein_coding	+
chr1_137913916_137915761	chr1	137913916	137915761	ENSMUSG00000026411.11	Tmem9	ENSMUST00000063719.8	protein_coding	+
chr1_137913916_137915761	chr1	137913916	137915761	ENSMUSG00000026411.11	Tmem9	ENSMUST00000118832.1	protein_coding	+
chr1_137913916_137915761	chr1	137913916	137915761	ENSMUSG00000026411.11	Tmem9	ENSMUST00000117950.1	protein_coding	+
chr1_138013381_138014081	chr1	138013381	138014081	ENSMUSG00000026407.10	Cacna1s	ENSMUST00000159106.1	processed_transcript	+
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000041642.11	Kif21b	ENSMUST00000075164.4	protein_coding	+
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000041642.11	Kif21b	ENSMUST00000163740.1	protein_coding	+
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000041642.11	Kif21b	ENSMUST00000130864.2	nonsense_mediated_decay	+
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000041642.11	Kif21b	ENSMUST00000122892.1	retained_intron	+
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000086264.3	Gm15850	ENSMUST00000146091.3	lincRNA	-
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000086264.3	Gm15850	ENSMUST00000165464.1	lincRNA	-
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000086264.3	Gm15850	ENSMUST00000166747.1	lincRNA	-
chr1_138027476_138028895	chr1	138027476	138028895	ENSMUSG00000086264.3	Gm15850	ENSMUST00000134998.1	lincRNA	-
chr1_138056424_138056765	chr1	138056424	138056765	ENSMUSG00000041642.11	Kif21b	ENSMUST00000171381.1	nonsense_mediated_decay	+
chr1_138126698_138127182	chr1	138126698	138127182	ENSMUSG00000041605.9	5730559C18Rik	ENSMUST00000144464.1	protein_coding	-
chr1_138126698_138127182	chr1	138126698	138127182	ENSMUSG00000041605.9	5730559C18Rik	ENSMUST00000150163.1	protein_coding	-
chr1_138130391_138131651	chr1	138130391	138131651	ENSMUSG00000041605.9	5730559C18Rik	ENSMUST00000153910.1	nonsense_mediated_decay	-
chr1_138130391_138131651	chr1	138130391	138131651	ENSMUSG00000041605.9	5730559C18Rik	ENSMUST00000048668.7	protein_coding	-
chr1_138130391_138131651	chr1	138130391	138131651	ENSMUSG00000041605.9	5730559C18Rik	ENSMUST00000120339.1	protein_coding	-
chr1_138156152_138157901	chr1	138156152	138157901	ENSMUSG00000091737.1	Gm17543	ENSMUST00000170977.1	lincRNA	+
chr1_138156152_138157901	chr1	138156152	138157901	ENSMUSG00000052759.6	Gpr25	ENSMUST00000086395.5	protein_coding	-
chr1_138241357_138243582	chr1	138241357	138243582	ENSMUSG00000041570.8	Camsap2	ENSMUST00000167048.1	protein_coding	-
chr1_138241357_138243582	chr1	138241357	138243582	ENSMUSG00000041570.8	Camsap2	ENSMUST00000048309.6	protein_coding	-
chr1_138241357_138243582	chr1	138241357	138243582	ENSMUSG00000041570.8	Camsap2	ENSMUST00000094523.3	protein_coding	-
chr1_138311374_138312366	chr1	138311374	138312366	ENSMUSG00000026404.6	Ddx59	ENSMUST00000027655.6	protein_coding	+
chr1_138311374_138312366	chr1	138311374	138312366	ENSMUSG00000026404.6	Ddx59	ENSMUST00000129218.1	retained_intron	+
chr1_138311374_138312366	chr1	138311374	138312366	ENSMUSG00000086553.1	9230116N13Rik	ENSMUST00000140195.1	lincRNA	-
chr1_138326704_138327245	chr1	138326704	138327245	ENSMUSG00000026404.6	Ddx59	ENSMUST00000122959.1	processed_transcript	+
chr1_138520657_138522982	chr1	138520657	138522982	ENSMUSG00000041483.8	Zfp281	ENSMUST00000047734.8	protein_coding	+
chr1_138520657_138522982	chr1	138520657	138522982	ENSMUSG00000041483.8	Zfp281	ENSMUST00000112046.1	protein_coding	+
chr1_138520657_138522982	chr1	138520657	138522982	ENSMUSG00000091667.1	Gm17718	ENSMUST00000166559.1	lincRNA	-
chr1_138592173_138593304	chr1	138592173	138593304	ENSMUSG00000085011.1	Gm16880	ENSMUST00000145442.1	lincRNA	+
chr1_138856787_138857743	chr1	138856787	138857743	ENSMUSG00000026398.8	Nr5a2	ENSMUST00000027649.7	protein_coding	-
chr1_139630863_139631490	chr1	139630863	139631490	ENSMUSG00000088715.1	SNORA17	ENSMUST00000158090.1	snoRNA	+
chr1_139824312_139825599	chr1	139824312	139825599	ENSMUSG00000051480.2	A130050O07Rik	ENSMUST00000054333.2	protein_coding	+
chr1_139862602_139863737	chr1	139862602	139863737	ENSMUSG00000065565.1	Mir181a-1	ENSMUST00000083631.1	miRNA	+
chr1_139862602_139863737	chr1	139862602	139863737	ENSMUSG00000065458.1	Mir181b-1	ENSMUST00000083524.1	miRNA	+
chr1_140071172_140072641	chr1	140071172	140072641	ENSMUSG00000026395.8	Ptprc	ENSMUST00000081416.5	protein_coding	-
chr1_140071172_140072641	chr1	140071172	140072641	ENSMUSG00000026395.8	Ptprc	ENSMUST00000074797.6	protein_coding	-
chr1_140071172_140072641	chr1	140071172	140072641	ENSMUSG00000026395.8	Ptprc	ENSMUST00000027645.7	protein_coding	-
chr1_140071172_140072641	chr1	140071172	140072641	ENSMUSG00000026395.8	Ptprc	ENSMUST00000112038.2	protein_coding	-
chr1_140071172_140072641	chr1	140071172	140072641	ENSMUSG00000026395.8	Ptprc	ENSMUST00000112036.2	protein_coding	-
chr1_140170083_140170664	chr1	140170083	140170664	ENSMUSG00000026394.4	Atp6v1g3	ENSMUST00000027643.4	protein_coding	+
chr1_140514333_140516960	chr1	140514333	140516960	ENSMUSG00000026393.3	Nek7	ENSMUST00000166904.1	protein_coding	-
chr1_140514333_140516960	chr1	140514333	140516960	ENSMUSG00000026393.3	Nek7	ENSMUST00000027642.2	protein_coding	-
chr1_140738892_140739665	chr1	140738892	140739665	ENSMUSG00000019230.7	Lhx9	ENSMUST00000112026.2	protein_coding	-
chr1_140738892_140739665	chr1	140738892	140739665	ENSMUSG00000019230.7	Lhx9	ENSMUST00000019374.7	protein_coding	-
chr1_140743845_140744045	chr1	140743845	140744045	ENSMUSG00000019230.7	Lhx9	ENSMUST00000046870.5	protein_coding	-
chr1_140743845_140744045	chr1	140743845	140744045	ENSMUSG00000019230.7	Lhx9	ENSMUST00000138932.1	nonsense_mediated_decay	-
chr1_140743845_140744045	chr1	140743845	140744045	ENSMUSG00000019230.7	Lhx9	ENSMUST00000093486.3	protein_coding	-
chr1_140744696_140745926	chr1	140744696	140745926	ENSMUSG00000019230.7	Lhx9	ENSMUST00000112030.1	protein_coding	-
chr1_140753000_140753981	chr1	140753000	140753981	ENSMUSG00000079283.1	2310009B15Rik	ENSMUST00000112025.1	protein_coding	-
chr1_140774480_140774951	chr1	140774480	140774951	ENSMUSG00000065275.1	n-R5s217	ENSMUST00000083341.1	rRNA	-
chr1_140858976_140861130	chr1	140858976	140861130	ENSMUSG00000056268.8	Dennd1b	ENSMUST00000070283.5	protein_coding	+
chr1_140858976_140861130	chr1	140858976	140861130	ENSMUSG00000056268.8	Dennd1b	ENSMUST00000145931.1	retained_intron	+
chr1_140858976_140861130	chr1	140858976	140861130	ENSMUSG00000056268.8	Dennd1b	ENSMUST00000168527.1	protein_coding	+
chr1_140858976_140861130	chr1	140858976	140861130	ENSMUSG00000056268.8	Dennd1b	ENSMUST00000133941.1	nonsense_mediated_decay	+
chr1_140863379_140864712	chr1	140863379	140864712	ENSMUSG00000056268.8	Dennd1b	ENSMUST00000094505.3	protein_coding	+
chr1_140888621_140889629	chr1	140888621	140889629	ENSMUSG00000085361.1	Gm16305	ENSMUST00000140747.1	transcribed_unprocessed_pseudogene	-
chr1_140989061_140989548	chr1	140989061	140989548	ENSMUSG00000056268.8	Dennd1b	ENSMUST00000137127.1	processed_transcript	+
chr1_141224786_141226089	chr1	141224786	141226089	ENSMUSG00000063681.7	Crb1	ENSMUST00000137030.1	nonsense_mediated_decay	-
chr1_141224786_141226089	chr1	141224786	141226089	ENSMUSG00000063681.7	Crb1	ENSMUST00000132845.1	nonsense_mediated_decay	-
chr1_141273257_141273858	chr1	141273257	141273858	ENSMUSG00000063681.7	Crb1	ENSMUST00000136062.1	retained_intron	-
chr1_141273257_141273858	chr1	141273257	141273858	ENSMUSG00000063681.7	Crb1	ENSMUST00000027616.6	protein_coding	-
chr1_141273257_141273858	chr1	141273257	141273858	ENSMUSG00000063681.7	Crb1	ENSMUST00000145244.1	protein_coding	-
chr1_141273257_141273858	chr1	141273257	141273858	ENSMUSG00000063681.7	Crb1	ENSMUST00000131586.1	protein_coding	-
chr1_141273257_141273858	chr1	141273257	141273858	ENSMUSG00000063681.7	Crb1	ENSMUST00000059825.5	protein_coding	-
chr1_141318043_141319999	chr1	141318043	141319999	ENSMUSG00000033964.7	Zbtb41	ENSMUST00000039867.7	protein_coding	+
chr1_141350443_141352216	chr1	141350443	141352216	ENSMUSG00000033952.8	Aspm	ENSMUST00000155402.1	retained_intron	+
chr1_141350443_141352216	chr1	141350443	141352216	ENSMUSG00000033952.8	Aspm	ENSMUST00000053364.8	protein_coding	+
chr1_141350443_141352216	chr1	141350443	141352216	ENSMUSG00000033952.8	Aspm	ENSMUST00000097554.3	protein_coding	+
chr1_141350443_141352216	chr1	141350443	141352216	ENSMUSG00000033952.8	Aspm	ENSMUST00000128413.1	processed_transcript	+
chr1_141397287_141398709	chr1	141397287	141398709	ENSMUSG00000026368.5	F13b	ENSMUST00000027615.5	protein_coding	+
chr1_141397287_141398709	chr1	141397287	141398709	ENSMUSG00000026368.5	F13b	ENSMUST00000139080.1	processed_transcript	+
chr1_141456601_141457379	chr1	141456601	141457379	ENSMUSG00000057037.6	Cfhr1	ENSMUST00000160423.1	protein_coding	-
chr1_141456601_141457379	chr1	141456601	141457379	ENSMUSG00000057037.6	Cfhr1	ENSMUST00000023965.5	protein_coding	-
chr1_141677621_141678425	chr1	141677621	141678425	ENSMUSG00000070594.4	Gm4788	ENSMUST00000111989.2	protein_coding	-
chr1_141677621_141678425	chr1	141677621	141678425	ENSMUSG00000070594.4	Gm4788	ENSMUST00000111986.2	protein_coding	-
chr1_141677621_141678425	chr1	141677621	141678425	ENSMUSG00000070594.4	Gm4788	ENSMUST00000027612.8	protein_coding	-
chr1_141755114_141755743	chr1	141755114	141755743	ENSMUSG00000033898.10	Cfhr2	ENSMUST00000094489.3	protein_coding	-
chr1_141755114_141755743	chr1	141755114	141755743	ENSMUSG00000033898.10	Cfhr2	ENSMUST00000111984.2	protein_coding	-
chr1_141915381_141915950	chr1	141915381	141915950	ENSMUSG00000033898.10	Cfhr2	ENSMUST00000094484.4	protein_coding	-
chr1_141915381_141915950	chr1	141915381	141915950	ENSMUSG00000033898.10	Cfhr2	ENSMUST00000170974.1	protein_coding	-
chr1_142079660_142080450	chr1	142079660	142080450	ENSMUSG00000026365.9	Cfh	ENSMUST00000148225.1	retained_intron	-
chr1_142079660_142080450	chr1	142079660	142080450	ENSMUSG00000026365.9	Cfh	ENSMUST00000123238.1	nonsense_mediated_decay	-
chr1_142079660_142080450	chr1	142079660	142080450	ENSMUSG00000026365.9	Cfh	ENSMUST00000066859.6	protein_coding	-
chr1_142079660_142080450	chr1	142079660	142080450	ENSMUSG00000026365.9	Cfh	ENSMUST00000111977.1	protein_coding	-
chr1_142079660_142080450	chr1	142079660	142080450	ENSMUSG00000026365.9	Cfh	ENSMUST00000111976.2	protein_coding	-
chr1_142141909_142143537	chr1	142141909	142143537	ENSMUSG00000052726.9	Kcnt2	ENSMUST00000119786.1	protein_coding	+
chr1_142141909_142143537	chr1	142141909	142143537	ENSMUSG00000052726.9	Kcnt2	ENSMUST00000120796.1	protein_coding	+
chr1_142141909_142143537	chr1	142141909	142143537	ENSMUSG00000052726.9	Kcnt2	ENSMUST00000060201.8	protein_coding	+
chr1_142141909_142143537	chr1	142141909	142143537	ENSMUSG00000052726.9	Kcnt2	ENSMUST00000154966.1	retained_intron	+
chr1_142141909_142143537	chr1	142141909	142143537	ENSMUSG00000052726.9	Kcnt2	ENSMUST00000120709.1	protein_coding	+
chr1_145487320_145488640	chr1	145487320	145488640	ENSMUSG00000033849.2	B3galt2	ENSMUST00000038252.2	protein_coding	+
chr1_145487320_145488640	chr1	145487320	145488640	ENSMUSG00000026361.7	Cdc73	ENSMUST00000162638.1	processed_transcript	-
chr1_145549132_145550611	chr1	145549132	145550611	ENSMUSG00000026361.7	Cdc73	ENSMUST00000159794.1	processed_transcript	-
chr1_145549132_145550611	chr1	145549132	145550611	ENSMUSG00000026361.7	Cdc73	ENSMUST00000018337.7	protein_coding	-
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000145969.1	protein_coding	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000050491.9	protein_coding	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000126514.1	processed_transcript	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000148600.1	retained_intron	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000149103.1	processed_transcript	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000111957.3	protein_coding	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000163896.1	protein_coding	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000145571.1	protein_coding	+
chr1_145585848_145588074	chr1	145585848	145588074	ENSMUSG00000018196.11	Glrx2	ENSMUST00000129653.1	protein_coding	+
chr1_145592934_145593320	chr1	145592934	145593320	ENSMUSG00000018196.11	Glrx2	ENSMUST00000152435.1	processed_transcript	+
chr1_145623256_145625324	chr1	145623256	145625324	ENSMUSG00000018189.6	Uchl5	ENSMUST00000018333.6	protein_coding	+
chr1_145623256_145625324	chr1	145623256	145625324	ENSMUSG00000018199.8	Trove2	ENSMUST00000018343.8	retained_intron	-
chr1_145623256_145625324	chr1	145623256	145625324	ENSMUSG00000018199.8	Trove2	ENSMUST00000159879.1	protein_coding	-
chr1_145850458_145852358	chr1	145850458	145852358	ENSMUSG00000026360.3	Rgs2	ENSMUST00000134817.1	retained_intron	-
chr1_145850458_145852358	chr1	145850458	145852358	ENSMUSG00000026360.3	Rgs2	ENSMUST00000153527.1	retained_intron	-
chr1_145850458_145852358	chr1	145850458	145852358	ENSMUSG00000026360.3	Rgs2	ENSMUST00000027606.3	retained_intron	-
chr1_145850458_145852358	chr1	145850458	145852358	ENSMUSG00000026360.3	Rgs2	ENSMUST00000127206.1	protein_coding	-
chr1_146024164_146024950	chr1	146024164	146024950	ENSMUSG00000051079.2	Rgs13	ENSMUST00000052375.1	protein_coding	-
chr1_146024164_146024950	chr1	146024164	146024950	ENSMUSG00000051079.2	Rgs13	ENSMUST00000111941.1	protein_coding	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000169042.1	retained_intron	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000172388.1	protein_coding	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000167812.1	retained_intron	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000169409.1	nonsense_mediated_decay	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000027604.6	protein_coding	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000170870.1	retained_intron	-
chr1_146095663_146096768	chr1	146095663	146096768	ENSMUSG00000026358.6	Rgs1	ENSMUST00000167317.1	retained_intron	-
chr1_146622178_146622845	chr1	146622178	146622845	ENSMUSG00000026357.3	Rgs18	ENSMUST00000027603.3	protein_coding	-
chr1_147137473_147138509	chr1	147137473	147138509	ENSMUSG00000088579.1	SNORA17	ENSMUST00000157954.1	snoRNA	-
chr1_148341353_148342896	chr1	148341353	148342896	ENSMUSG00000035131.8	Fam5c	ENSMUST00000074622.4	protein_coding	+
chr1_148344469_148346227	chr1	148344469	148346227	ENSMUSG00000035131.8	Fam5c	ENSMUST00000132847.1	protein_coding	+
chr1_148344469_148346227	chr1	148344469	148346227	ENSMUSG00000035131.8	Fam5c	ENSMUST00000166814.1	protein_coding	+
chr1_148344469_148346227	chr1	148344469	148346227	ENSMUSG00000035131.8	Fam5c	ENSMUST00000128345.1	nonsense_mediated_decay	+
chr1_148344469_148346227	chr1	148344469	148346227	ENSMUSG00000035131.8	Fam5c	ENSMUST00000125331.1	retained_intron	+
chr1_148571946_148572568	chr1	148571946	148572568	ENSMUSG00000080078.2	Gm15583	ENSMUST00000116191.2	transcribed_processed_pseudogene	+
chr1_148652976_148653593	chr1	148652976	148653593	ENSMUSG00000087627.1	A230059L01Rik	ENSMUST00000126596.1	antisense	-
chr1_151688026_151688576	chr1	151688026	151688576	ENSMUSG00000077516.1	n-R5s219	ENSMUST00000104328.1	rRNA	+
chr1_151768472_151769946	chr1	151768472	151769946	ENSMUSG00000056220.8	Pla2g4a	ENSMUST00000111926.2	protein_coding	-
chr1_151807710_151809319	chr1	151807710	151809319	ENSMUSG00000056220.8	Pla2g4a	ENSMUST00000134676.1	processed_transcript	-
chr1_151807710_151809319	chr1	151807710	151809319	ENSMUSG00000056220.8	Pla2g4a	ENSMUST00000142040.1	retained_intron	-
chr1_151807710_151809319	chr1	151807710	151809319	ENSMUSG00000056220.8	Pla2g4a	ENSMUST00000070200.8	protein_coding	-
chr1_151946424_151947611	chr1	151946424	151947611	ENSMUSG00000032487.7	Ptgs2	ENSMUST00000035065.7	protein_coding	+
chr1_151946424_151947611	chr1	151946424	151947611	ENSMUSG00000084952.1	7530420F21Rik	ENSMUST00000127160.1	lincRNA	-
chr1_151946424_151947611	chr1	151946424	151947611	ENSMUSG00000084952.1	7530420F21Rik	ENSMUST00000126669.1	lincRNA	-
chr1_152011841_152013223	chr1	152011841	152013223	ENSMUSG00000091113.1	Gm17311	ENSMUST00000163840.1	lincRNA	-
chr1_152113209_152114364	chr1	152113209	152114364	ENSMUSG00000081535.1	Gm15453	ENSMUST00000121422.1	transcribed_processed_pseudogene	-
chr1_152229733_152229976	chr1	152229733	152229976	ENSMUSG00000006010.8	BC003331	ENSMUST00000132809.1	processed_transcript	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006005.9	Tpr	ENSMUST00000124973.1	protein_coding	+
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006005.9	Tpr	ENSMUST00000064506.6	protein_coding	+
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000140112.1	retained_intron	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000150615.1	processed_transcript	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000148389.1	processed_transcript	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000094477.2	protein_coding	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000006167.6	protein_coding	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000097547.3	protein_coding	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006005.9	Tpr	ENSMUST00000119161.1	protein_coding	+
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006005.9	Tpr	ENSMUST00000131701.1	retained_intron	+
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000097546.2	protein_coding	-
chr1_152239532_152241124	chr1	152239532	152241124	ENSMUSG00000006010.8	BC003331	ENSMUST00000111913.2	protein_coding	-
chr1_152287599_152287891	chr1	152287599	152287891	ENSMUSG00000006005.9	Tpr	ENSMUST00000128417.1	retained_intron	+
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000159035.1	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000161320.1	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000161611.1	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000006171.8	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000162367.1	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000164600.1	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000111902.2	protein_coding	-
chr1_152312394_152313787	chr1	152312394	152313787	ENSMUSG00000006014.9	Prg4	ENSMUST00000111901.2	protein_coding	-
chr1_152427542_152428429	chr1	152427542	152428429	ENSMUSG00000066842.11	Hmcn1	ENSMUST00000137909.1	processed_transcript	-
chr1_152838890_152841178	chr1	152838890	152841178	ENSMUSG00000066842.11	Hmcn1	ENSMUST00000155715.1	retained_intron	-
chr1_152838890_152841178	chr1	152838890	152841178	ENSMUSG00000066842.11	Hmcn1	ENSMUST00000137197.1	protein_coding	-
chr1_152838890_152841178	chr1	152838890	152841178	ENSMUSG00000066842.11	Hmcn1	ENSMUST00000074783.4	protein_coding	-
chr1_152909277_152910172	chr1	152909277	152910172	ENSMUSG00000065624.1	U6	ENSMUST00000083690.1	snRNA	-
chr1_153160471_153160734	chr1	153160471	153160734	ENSMUSG00000089221.1	Y_RNA	ENSMUST00000158596.1	misc_RNA	+
chr1_153190543_153192910	chr1	153190543	153192910	ENSMUSG00000023150.8	Ivns1abp	ENSMUST00000023918.6	protein_coding	+
chr1_153190543_153192910	chr1	153190543	153192910	ENSMUSG00000023150.8	Ivns1abp	ENSMUST00000097543.1	protein_coding	+
chr1_153190543_153192910	chr1	153190543	153192910	ENSMUSG00000023150.8	Ivns1abp	ENSMUST00000111887.3	protein_coding	+
chr1_153190543_153192910	chr1	153190543	153192910	ENSMUSG00000063886.3	Gm10138	ENSMUST00000076388.3	pseudogene	-
chr1_153274914_153276780	chr1	153274914	153276780	ENSMUSG00000053286.5	1190005F20Rik	ENSMUST00000065625.5	protein_coding	+
chr1_153274914_153276780	chr1	153274914	153276780	ENSMUSG00000052748.7	1200016B10Rik	ENSMUST00000111883.2	nonsense_mediated_decay	-
chr1_153274914_153276780	chr1	153274914	153276780	ENSMUSG00000052748.7	1200016B10Rik	ENSMUST00000064771.5	protein_coding	-
chr1_153274914_153276780	chr1	153274914	153276780	ENSMUSG00000052748.7	1200016B10Rik	ENSMUST00000086279.4	protein_coding	-
chr1_153346929_153348696	chr1	153346929	153348696	ENSMUSG00000026484.7	Rnf2	ENSMUST00000076110.4	protein_coding	-
chr1_153417986_153419629	chr1	153417986	153419629	ENSMUSG00000026483.7	Fam129a	ENSMUST00000134499.1	protein_coding	+
chr1_153417986_153419629	chr1	153417986	153419629	ENSMUSG00000026483.7	Fam129a	ENSMUST00000148810.1	protein_coding	+
chr1_153417986_153419629	chr1	153417986	153419629	ENSMUSG00000026483.7	Fam129a	ENSMUST00000097541.3	nonsense_mediated_decay	+
chr1_153417986_153419629	chr1	153417986	153419629	ENSMUSG00000026483.7	Fam129a	ENSMUST00000111875.1	protein_coding	+
chr1_153523781_153525660	chr1	153523781	153525660	ENSMUSG00000026483.7	Fam129a	ENSMUST00000086267.5	processed_transcript	+
chr1_153600135_153603262	chr1	153600135	153603262	ENSMUSG00000043019.5	Edem3	ENSMUST00000059498.5	protein_coding	+
chr1_153600135_153603262	chr1	153600135	153603262	ENSMUSG00000043019.5	Edem3	ENSMUST00000163169.1	protein_coding	+
chr1_153853678_153853878	chr1	153853678	153853878	ENSMUSG00000032666.10	1700025G04Rik	ENSMUST00000121533.1	protein_coding	-
chr1_153935849_153938576	chr1	153935849	153938576	ENSMUSG00000032666.10	1700025G04Rik	ENSMUST00000044581.7	protein_coding	-
chr1_154232968_154234282	chr1	154232968	154234282	ENSMUSG00000014980.8	Tsen15	ENSMUST00000163027.1	processed_transcript	-
chr1_154232968_154234282	chr1	154232968	154234282	ENSMUSG00000014980.8	Tsen15	ENSMUST00000162371.1	protein_coding	-
chr1_154232968_154234282	chr1	154232968	154234282	ENSMUSG00000014980.8	Tsen15	ENSMUST00000015124.8	protein_coding	-
chr1_154246730_154248978	chr1	154246730	154248978	ENSMUSG00000032649.8	Glt25d2	ENSMUST00000044311.8	protein_coding	+
chr1_154246730_154248978	chr1	154246730	154248978	ENSMUSG00000032649.8	Glt25d2	ENSMUST00000127586.1	nonsense_mediated_decay	+
chr1_154254331_154254912	chr1	154254331	154254912	ENSMUSG00000080878.1	Gm15618	ENSMUST00000121610.1	transcribed_processed_pseudogene	-
chr1_154439109_154440303	chr1	154439109	154440303	ENSMUSG00000026482.7	Rgl1	ENSMUST00000128251.1	processed_transcript	-
chr1_154471660_154472835	chr1	154471660	154472835	ENSMUSG00000026482.7	Rgl1	ENSMUST00000149536.1	processed_transcript	-
chr1_154471660_154472835	chr1	154471660	154472835	ENSMUSG00000026482.7	Rgl1	ENSMUST00000027760.7	protein_coding	-
chr1_154534353_154535536	chr1	154534353	154535536	ENSMUSG00000086145.1	Gm15479	ENSMUST00000139309.1	sense_intronic	-
chr1_154597289_154598551	chr1	154597289	154598551	ENSMUSG00000055547.4	Apobec4	ENSMUST00000068875.4	protein_coding	+
chr1_154612228_154614840	chr1	154612228	154614840	ENSMUSG00000008475.7	Arpc5	ENSMUST00000077755.5	protein_coding	+
chr1_154612228_154614840	chr1	154612228	154614840	ENSMUSG00000008475.7	Arpc5	ENSMUST00000097536.4	protein_coding	+
chr1_154612228_154614840	chr1	154612228	154614840	ENSMUSG00000026482.7	Rgl1	ENSMUST00000148865.1	protein_coding	-
chr1_154612228_154614840	chr1	154612228	154614840	ENSMUSG00000026482.7	Rgl1	ENSMUST00000111857.1	protein_coding	-
chr1_154612228_154614840	chr1	154612228	154614840	ENSMUSG00000026482.7	Rgl1	ENSMUST00000111859.1	protein_coding	-
chr1_154615186_154615610	chr1	154615186	154615610	ENSMUSG00000008475.7	Arpc5	ENSMUST00000143008.1	retained_intron	+
chr1_154654580_154655834	chr1	154654580	154655834	ENSMUSG00000026480.6	Ncf2	ENSMUST00000027754.6	protein_coding	+
chr1_154718205_154718783	chr1	154718205	154718783	ENSMUSG00000042772.8	Smg7	ENSMUST00000164030.1	protein_coding	-
chr1_154748830_154751286	chr1	154748830	154751286	ENSMUSG00000042772.8	Smg7	ENSMUST00000111836.2	protein_coding	-
chr1_154748830_154751286	chr1	154748830	154751286	ENSMUSG00000042772.8	Smg7	ENSMUST00000073441.6	protein_coding	-
chr1_154801762_154803874	chr1	154801762	154803874	ENSMUSG00000042751.8	Nmnat2	ENSMUST00000043313.8	protein_coding	+
chr1_155032386_155033905	chr1	155032386	155033905	ENSMUSG00000026479.6	Lamc2	ENSMUST00000027753.6	protein_coding	-
chr1_155032386_155033905	chr1	155032386	155033905	ENSMUSG00000026479.6	Lamc2	ENSMUST00000043090.3	protein_coding	-
chr1_155178844_155181309	chr1	155178844	155181309	ENSMUSG00000026478.8	Lamc1	ENSMUST00000027752.8	protein_coding	-
chr1_155271285_155272967	chr1	155271285	155272967	ENSMUSG00000042708.6	1700012A16Rik	ENSMUST00000042373.5	protein_coding	+
chr1_155271285_155272967	chr1	155271285	155272967	ENSMUSG00000042708.6	1700012A16Rik	ENSMUST00000136614.1	nonsense_mediated_decay	+
chr1_155333655_155335226	chr1	155333655	155335226	ENSMUSG00000042699.5	Dhx9	ENSMUST00000042141.5	protein_coding	-
chr1_155396392_155397338	chr1	155396392	155397338	ENSMUSG00000042684.7	Npl	ENSMUST00000041874.7	protein_coding	-
chr1_155499537_155501302	chr1	155499537	155501302	ENSMUSG00000042671.6	Rgs8	ENSMUST00000041776.5	protein_coding	+
chr1_155507919_155509397	chr1	155507919	155509397	ENSMUSG00000042671.6	Rgs8	ENSMUST00000124500.1	protein_coding	+
chr1_155512290_155513123	chr1	155512290	155513123	ENSMUSG00000042671.6	Rgs8	ENSMUST00000152114.1	protein_coding	+
chr1_155512290_155513123	chr1	155512290	155513123	ENSMUSG00000042671.6	Rgs8	ENSMUST00000111812.1	protein_coding	+
chr1_155512290_155513123	chr1	155512290	155513123	ENSMUSG00000042671.6	Rgs8	ENSMUST00000147700.1	protein_coding	+
chr1_155512290_155513123	chr1	155512290	155513123	ENSMUSG00000042671.6	Rgs8	ENSMUST00000147482.1	protein_coding	+
chr1_155512290_155513123	chr1	155512290	155513123	ENSMUSG00000042671.6	Rgs8	ENSMUST00000111814.1	protein_coding	+
chr1_155512290_155513123	chr1	155512290	155513123	ENSMUSG00000042671.6	Rgs8	ENSMUST00000111810.1	protein_coding	+
chr1_155514293_155515203	chr1	155514293	155515203	ENSMUSG00000042671.6	Rgs8	ENSMUST00000147794.1	processed_transcript	+
chr1_155586620_155588017	chr1	155586620	155588017	ENSMUSG00000026475.7	Rgs16	ENSMUST00000027748.7	protein_coding	+
chr1_155596188_155597131	chr1	155596188	155597131	ENSMUSG00000066800.3	Rnasel	ENSMUST00000086209.3	protein_coding	+
chr1_155598786_155599974	chr1	155598786	155599974	ENSMUSG00000066800.3	Rnasel	ENSMUST00000086734.2	protein_coding	+
chr1_155654502_155655374	chr1	155654502	155655374	ENSMUSG00000042641.10	Rgsl1	ENSMUST00000141249.1	lincRNA	-
chr1_155691172_155691410	chr1	155691172	155691410	ENSMUSG00000042641.10	Rgsl1	ENSMUST00000124558.1	lincRNA	-
chr1_155721640_155722059	chr1	155721640	155722059	ENSMUSG00000043282.3	Gm5531	ENSMUST00000055314.3	protein_coding	+
chr1_155746169_155748889	chr1	155746169	155748889	ENSMUSG00000026473.9	Glul	ENSMUST00000086199.5	protein_coding	+
chr1_155746169_155748889	chr1	155746169	155748889	ENSMUSG00000026473.9	Glul	ENSMUST00000139476.1	protein_coding	+
chr1_155746169_155748889	chr1	155746169	155748889	ENSMUSG00000026473.9	Glul	ENSMUST00000140685.1	protein_coding	+
chr1_155746169_155748889	chr1	155746169	155748889	ENSMUSG00000045968.6	5830403L16Rik	ENSMUST00000123490.1	protein_coding	-
chr1_155753073_155753335	chr1	155753073	155753335	ENSMUSG00000026473.9	Glul	ENSMUST00000154576.1	processed_transcript	+
chr1_156051151_156051378	chr1	156051151	156051378	ENSMUSG00000066797.4	Zfp648	ENSMUST00000086195.4	protein_coding	+
chr1_156572889_156574327	chr1	156572889	156574327	ENSMUSG00000004110.7	Cacna1e	ENSMUST00000004214.7	protein_coding	-
chr1_156929524_156931538	chr1	156929524	156931538	ENSMUSG00000086217.1	Gm9530	ENSMUST00000128143.1	lincRNA	-
chr1_156944456_156947193	chr1	156944456	156947193	ENSMUSG00000056708.4	Ier5	ENSMUST00000055322.4	protein_coding	-
chr1_156992670_156994357	chr1	156992670	156994357	ENSMUSG00000026471.8	Mr1	ENSMUST00000027744.8	protein_coding	-
chr1_157005180_157006721	chr1	157005180	157006721	ENSMUSG00000026470.8	Stx6	ENSMUST00000027743.7	protein_coding	+
chr1_157005180_157006721	chr1	157005180	157006721	ENSMUSG00000026470.8	Stx6	ENSMUST00000111779.3	protein_coding	+
chr1_157079519_157080253	chr1	157079519	157080253	ENSMUSG00000033722.2	BC034090	ENSMUST00000035914.2	protein_coding	-
chr1_157263411_157265349	chr1	157263411	157265349	ENSMUSG00000026469.8	Xpr1	ENSMUST00000129271.1	retained_intron	-
chr1_157263411_157265349	chr1	157263411	157265349	ENSMUSG00000026469.8	Xpr1	ENSMUST00000111774.1	protein_coding	-
chr1_157263411_157265349	chr1	157263411	157265349	ENSMUSG00000026469.8	Xpr1	ENSMUST00000111775.1	protein_coding	-
chr1_157263411_157265349	chr1	157263411	157265349	ENSMUSG00000026469.8	Xpr1	ENSMUST00000027741.5	protein_coding	-
chr1_157373973_157375390	chr1	157373973	157375390	ENSMUSG00000073535.4	Gm5532	ENSMUST00000097531.2	lincRNA	-
chr1_157404645_157406240	chr1	157404645	157406240	ENSMUSG00000033701.7	Acbd6	ENSMUST00000080138.6	protein_coding	+
chr1_157404645_157406240	chr1	157404645	157406240	ENSMUSG00000033701.7	Acbd6	ENSMUST00000097529.3	protein_coding	+
chr1_157404645_157406240	chr1	157404645	157406240	ENSMUSG00000033701.7	Acbd6	ENSMUST00000035560.3	protein_coding	+
chr1_157587697_157589348	chr1	157587697	157589348	ENSMUSG00000026468.6	Lhx4	ENSMUST00000027740.6	protein_coding	-
chr1_157628894_157630067	chr1	157628894	157630067	ENSMUSG00000033684.8	Qsox1	ENSMUST00000130701.1	processed_transcript	-
chr1_157641861_157643412	chr1	157641861	157643412	ENSMUSG00000033684.8	Qsox1	ENSMUST00000132495.1	retained_intron	-
chr1_157659073_157660730	chr1	157659073	157660730	ENSMUSG00000033684.8	Qsox1	ENSMUST00000140809.1	retained_intron	-
chr1_157659073_157660730	chr1	157659073	157660730	ENSMUSG00000033684.8	Qsox1	ENSMUST00000151368.1	retained_intron	-
chr1_157659073_157660730	chr1	157659073	157660730	ENSMUSG00000033684.8	Qsox1	ENSMUST00000111764.2	protein_coding	-
chr1_157659073_157660730	chr1	157659073	157660730	ENSMUSG00000033684.8	Qsox1	ENSMUST00000035325.8	protein_coding	-
chr1_157733829_157734574	chr1	157733829	157734574	ENSMUSG00000033671.10	Cep350	ENSMUST00000129865.1	processed_transcript	-
chr1_157819415_157821551	chr1	157819415	157821551	ENSMUSG00000033671.10	Cep350	ENSMUST00000124495.1	protein_coding	-
chr1_157819415_157821551	chr1	157819415	157821551	ENSMUSG00000033671.10	Cep350	ENSMUST00000078888.6	protein_coding	-
chr1_157819415_157821551	chr1	157819415	157821551	ENSMUSG00000033671.10	Cep350	ENSMUST00000138762.1	protein_coding	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000050565.8	Tor1aip2	ENSMUST00000065673.3	protein_coding	+
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000079252.3	Tor1aip2	ENSMUST00000111754.1	protein_coding	+
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000050565.8	Tor1aip2	ENSMUST00000133152.1	protein_coding	+
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000079252.3	Tor1aip2	ENSMUST00000128941.1	nonsense_mediated_decay	+
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000141980.1	retained_intron	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000130995.1	retained_intron	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000027738.7	protein_coding	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000126448.1	protein_coding	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000136331.1	nonsense_mediated_decay	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000097528.3	protein_coding	-
chr1_157882421_157884160	chr1	157882421	157884160	ENSMUSG00000026466.9	Tor1aip1	ENSMUST00000097527.3	protein_coding	-
chr1_157887625_157888377	chr1	157887625	157888377	ENSMUSG00000050565.8	Tor1aip2	ENSMUST00000060404.4	protein_coding	+
chr1_157887625_157888377	chr1	157887625	157888377	ENSMUSG00000079252.3	Tor1aip2	ENSMUST00000131359.1	processed_transcript	+
chr1_157887625_157888377	chr1	157887625	157888377	ENSMUSG00000079252.3	Tor1aip2	ENSMUST00000065648.8	protein_coding	+
chr1_157887625_157888377	chr1	157887625	157888377	ENSMUSG00000079252.3	Tor1aip2	ENSMUST00000097526.2	protein_coding	+
chr1_158134180_158135578	chr1	158134180	158135578	ENSMUSG00000015484.3	Fam163a	ENSMUST00000015628.3	protein_coding	-
chr1_158232685_158234379	chr1	158232685	158234379	ENSMUSG00000060985.8	Tdrd5	ENSMUST00000141760.2	processed_transcript	-
chr1_158232685_158234379	chr1	158232685	158234379	ENSMUSG00000060985.8	Tdrd5	ENSMUST00000119202.2	processed_transcript	-
chr1_158232685_158234379	chr1	158232685	158234379	ENSMUSG00000060985.8	Tdrd5	ENSMUST00000072556.6	processed_transcript	-
chr1_158232685_158234379	chr1	158232685	158234379	ENSMUSG00000060985.8	Tdrd5	ENSMUST00000167528.1	processed_transcript	-
chr1_158232685_158234379	chr1	158232685	158234379	ENSMUSG00000060985.8	Tdrd5	ENSMUST00000121146.2	processed_transcript	-
chr1_158240543_158241585	chr1	158240543	158241585	ENSMUSG00000026602.4	Nphs2	ENSMUST00000027896.4	protein_coding	+
chr1_158329985_158330446	chr1	158329985	158330446	ENSMUSG00000026601.6	9430070O13Rik	ENSMUST00000027895.6	protein_coding	-
chr1_158403904_158404824	chr1	158403904	158404824	ENSMUSG00000026600.6	Soat1	ENSMUST00000051396.6	protein_coding	-
chr1_158488250_158490166	chr1	158488250	158490166	ENSMUSG00000026596.7	Abl2	ENSMUST00000173929.1	protein_coding	+
chr1_158488250_158490166	chr1	158488250	158490166	ENSMUSG00000026596.7	Abl2	ENSMUST00000166172.2	protein_coding	+
chr1_158488250_158490166	chr1	158488250	158490166	ENSMUSG00000026596.7	Abl2	ENSMUST00000027888.6	protein_coding	+
chr1_158587583_158588511	chr1	158587583	158588511	ENSMUSG00000060519.5	Tor3a	ENSMUST00000154353.1	processed_transcript	-
chr1_158588565_158589559	chr1	158588565	158589559	ENSMUSG00000060519.5	Tor3a	ENSMUST00000154353.1	processed_transcript	-
chr1_158596964_158598159	chr1	158596964	158598159	ENSMUSG00000060519.5	Tor3a	ENSMUST00000152604.1	processed_transcript	-
chr1_158603359_158605273	chr1	158603359	158605273	ENSMUSG00000060519.5	Tor3a	ENSMUST00000122242.1	protein_coding	-
chr1_158603359_158605273	chr1	158603359	158605273	ENSMUSG00000060519.5	Tor3a	ENSMUST00000079625.4	protein_coding	-
chr1_158603359_158605273	chr1	158603359	158605273	ENSMUSG00000060519.5	Tor3a	ENSMUST00000150557.1	nonsense_mediated_decay	-
chr1_158603359_158605273	chr1	158603359	158605273	ENSMUSG00000060519.5	Tor3a	ENSMUST00000156861.1	retained_intron	-
chr1_158647914_158649858	chr1	158647914	158649858	ENSMUSG00000033557.11	Fam20b	ENSMUST00000086153.6	protein_coding	-
chr1_158647914_158649858	chr1	158647914	158649858	ENSMUSG00000033557.11	Fam20b	ENSMUST00000122424.1	protein_coding	-
chr1_158768279_158769394	chr1	158768279	158769394	ENSMUSG00000033544.6	Angptl1	ENSMUST00000027885.7	protein_coding	+
chr1_158768279_158769394	chr1	158768279	158769394	ENSMUSG00000033544.6	Angptl1	ENSMUST00000111720.1	protein_coding	+
chr1_158868545_158870758	chr1	158868545	158870758	ENSMUSG00000026594.7	Ralgps2	ENSMUST00000063199.6	protein_coding	-
chr1_158868545_158870758	chr1	158868545	158870758	ENSMUSG00000026594.7	Ralgps2	ENSMUST00000165172.1	protein_coding	-
chr1_158868545_158870758	chr1	158868545	158870758	ENSMUSG00000026594.7	Ralgps2	ENSMUST00000027886.7	protein_coding	-
chr1_158868545_158870758	chr1	158868545	158870758	ENSMUSG00000026594.7	Ralgps2	ENSMUST00000172057.1	protein_coding	-
chr1_158868545_158870758	chr1	158868545	158870758	ENSMUSG00000026594.7	Ralgps2	ENSMUST00000171292.1	protein_coding	-
chr1_159038658_159039022	chr1	159038658	159039022	ENSMUSG00000026592.7	1700057K13Rik	ENSMUST00000148649.1	nonsense_mediated_decay	-
chr1_159038658_159039022	chr1	159038658	159039022	ENSMUSG00000026592.7	1700057K13Rik	ENSMUST00000119526.1	protein_coding	-
chr1_159038658_159039022	chr1	159038658	159039022	ENSMUSG00000026592.7	1700057K13Rik	ENSMUST00000027884.6	protein_coding	-
chr1_159038658_159039022	chr1	159038658	159039022	ENSMUSG00000026592.7	1700057K13Rik	ENSMUST00000121911.1	protein_coding	-
chr1_159038658_159039022	chr1	159038658	159039022	ENSMUSG00000026592.7	1700057K13Rik	ENSMUST00000118207.1	protein_coding	-
chr1_159111164_159111638	chr1	159111164	159111638	ENSMUSG00000070565.5	Rasal2	ENSMUST00000128538.1	processed_transcript	-
chr1_159160418_159162144	chr1	159160418	159162144	ENSMUSG00000070565.5	Rasal2	ENSMUST00000143358.1	protein_coding	-
chr1_159173600_159174907	chr1	159173600	159174907	ENSMUSG00000070565.5	Rasal2	ENSMUST00000129880.1	protein_coding	-
chr1_159186013_159187252	chr1	159186013	159187252	ENSMUSG00000070565.5	Rasal2	ENSMUST00000134543.1	protein_coding	-
chr1_159341542_159343325	chr1	159341542	159343325	ENSMUSG00000049881.7	2810025M15Rik	ENSMUST00000061537.5	protein_coding	+
chr1_159341542_159343325	chr1	159341542	159343325	ENSMUSG00000070565.5	Rasal2	ENSMUST00000143080.1	retained_intron	-
chr1_159341542_159343325	chr1	159341542	159343325	ENSMUSG00000070565.5	Rasal2	ENSMUST00000132699.1	protein_coding	-
chr1_159341542_159343325	chr1	159341542	159343325	ENSMUSG00000070565.5	Rasal2	ENSMUST00000139470.1	protein_coding	-
chr1_159341542_159343325	chr1	159341542	159343325	ENSMUSG00000070565.5	Rasal2	ENSMUST00000078308.6	protein_coding	-
chr1_159388010_159389418	chr1	159388010	159389418	ENSMUSG00000033488.5	BC026585	ENSMUST00000046743.4	protein_coding	+
chr1_159388010_159389418	chr1	159388010	159389418	ENSMUSG00000033488.5	BC026585	ENSMUST00000119891.1	protein_coding	+
chr1_159436662_159437771	chr1	159436662	159437771	ENSMUSG00000026589.8	Sec16b	ENSMUST00000086130.2	protein_coding	+
chr1_159436662_159437771	chr1	159436662	159437771	ENSMUSG00000026589.8	Sec16b	ENSMUST00000027881.8	protein_coding	+
chr1_159455651_159457925	chr1	159455651	159457925	ENSMUSG00000026589.8	Sec16b	ENSMUST00000111700.1	protein_coding	+
chr1_159466127_159467152	chr1	159466127	159467152	ENSMUSG00000026589.8	Sec16b	ENSMUST00000146873.1	protein_coding	+
chr1_159467502_159468302	chr1	159467502	159468302	ENSMUSG00000026589.8	Sec16b	ENSMUST00000155665.1	retained_intron	+
chr1_160284660_160286882	chr1	160284660	160286882	ENSMUSG00000004031.8	Fam5b	ENSMUST00000004133.8	protein_coding	-
chr1_160292111_160294207	chr1	160292111	160294207	ENSMUSG00000026587.8	Astn1	ENSMUST00000046110.8	protein_coding	+
chr1_160292111_160294207	chr1	160292111	160294207	ENSMUSG00000026587.8	Astn1	ENSMUST00000170718.1	protein_coding	+
chr1_160774803_160775537	chr1	160774803	160775537	ENSMUSG00000073530.4	Pappa2	ENSMUST00000159860.1	retained_intron	-
chr1_160910446_160910655	chr1	160910446	160910655	ENSMUSG00000047661.2	1600012P17Rik	ENSMUST00000062159.2	protein_coding	-
chr1_160910446_160910655	chr1	160910446	160910655	ENSMUSG00000047661.2	1600012P17Rik	ENSMUST00000159892.1	processed_transcript	-
chr1_161161530_161162719	chr1	161161530	161162719	ENSMUSG00000040782.7	Rfwd2	ENSMUST00000076894.5	protein_coding	+
chr1_161544302_161546146	chr1	161544302	161546146	ENSMUSG00000073528.2	Gm10530	ENSMUST00000097514.2	protein_coding	+
chr1_161973789_161975869	chr1	161973789	161975869	ENSMUSG00000090394.1	4930523C07Rik	ENSMUST00000168250.1	processed_transcript	+
chr1_161973789_161975869	chr1	161973789	161975869	ENSMUSG00000090394.1	4930523C07Rik	ENSMUST00000163892.1	protein_coding	+
chr1_161973789_161975869	chr1	161973789	161975869	ENSMUSG00000090394.1	4930523C07Rik	ENSMUST00000060298.8	processed_transcript	+
chr1_161973789_161975869	chr1	161973789	161975869	ENSMUSG00000090394.1	4930523C07Rik	ENSMUST00000165923.1	processed_transcript	+
chr1_161973789_161975869	chr1	161973789	161975869	ENSMUSG00000050883.8	4930523C07Rik	ENSMUST00000168359.1	protein_coding	+
chr1_162083460_162083696	chr1	162083460	162083696	ENSMUSG00000026725.10	Tnn	ENSMUST00000039178.5	protein_coding	-
chr1_162124735_162126049	chr1	162124735	162126049	ENSMUSG00000058267.7	Mrps14	ENSMUST00000078878.7	nonsense_mediated_decay	+
chr1_162124735_162126049	chr1	162124735	162126049	ENSMUSG00000058267.7	Mrps14	ENSMUST00000135680.1	protein_coding	+
chr1_162124735_162126049	chr1	162124735	162126049	ENSMUSG00000058267.7	Mrps14	ENSMUST00000097193.2	protein_coding	+
chr1_162142124_162143910	chr1	162142124	162143910	ENSMUSG00000014226.4	Cacybp	ENSMUST00000014370.4	protein_coding	-
chr1_162239077_162239776	chr1	162239077	162239776	ENSMUSG00000026721.8	Rabgap1l	ENSMUST00000086099.2	protein_coding	-
chr1_162280312_162282838	chr1	162280312	162282838	ENSMUSG00000026721.8	Rabgap1l	ENSMUST00000028052.5	protein_coding	-
chr1_162575674_162576149	chr1	162575674	162576149	ENSMUSG00000077759.1	SNORA17	ENSMUST00000104571.1	snoRNA	+
chr1_162721800_162723614	chr1	162721800	162723614	ENSMUSG00000026721.8	Rabgap1l	ENSMUST00000028048.6	protein_coding	-
chr1_162721800_162723614	chr1	162721800	162723614	ENSMUSG00000026721.8	Rabgap1l	ENSMUST00000028049.7	protein_coding	-
chr1_162835888_162837774	chr1	162835888	162837774	ENSMUSG00000040423.4	Rc3h1	ENSMUST00000161609.1	protein_coding	+
chr1_162908258_162909691	chr1	162908258	162909691	ENSMUSG00000026715.7	Serpinc1	ENSMUST00000064725.5	protein_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000160152.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000161005.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159119.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159706.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000162558.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000161380.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000162289.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159663.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000161229.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159157.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000160429.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159404.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159438.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000065709.5	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000161461.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000162163.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159153.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000159890.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000064440.1	SNORD74	ENSMUST00000082506.1	snoRNA	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000080463.1	SNORD75	ENSMUST00000116813.1	snoRNA	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000053332.7	Gas5	ENSMUST00000160497.1	non_coding	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000064816.1	SNORD24	ENSMUST00000082882.1	snoRNA	+
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000159250.1	protein_coding	-
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000171748.1	protein_coding	-
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000162226.1	protein_coding	-
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000172044.1	protein_coding	-
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000163079.1	nonsense_mediated_decay	-
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000160056.1	nonsense_mediated_decay	-
chr1_162964030_162966081	chr1	162964030	162966081	ENSMUSG00000043467.11	Zbtb37	ENSMUST00000064713.3	protein_coding	-
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026708.9	Cenpl	ENSMUST00000028035.7	protein_coding	+
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026708.9	Cenpl	ENSMUST00000111620.3	protein_coding	+
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026708.9	Cenpl	ENSMUST00000143486.1	nonsense_mediated_decay	+
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026708.9	Cenpl	ENSMUST00000111618.1	protein_coding	+
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026708.9	Cenpl	ENSMUST00000111617.3	protein_coding	+
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026709.3	Dars2	ENSMUST00000159922.1	processed_transcript	-
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026709.3	Dars2	ENSMUST00000160591.1	retained_intron	-
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026709.3	Dars2	ENSMUST00000160759.1	retained_intron	-
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026709.3	Dars2	ENSMUST00000162654.1	retained_intron	-
chr1_163000174_163001909	chr1	163000174	163001909	ENSMUSG00000026709.3	Dars2	ENSMUST00000035430.3	protein_coding	-
chr1_163006044_163006894	chr1	163006044	163006894	ENSMUSG00000026708.9	Cenpl	ENSMUST00000155808.1	processed_transcript	+
chr1_163060691_163062028	chr1	163060691	163062028	ENSMUSG00000026705.10	Klhl20	ENSMUST00000145736.1	retained_intron	-
chr1_163060691_163062028	chr1	163060691	163062028	ENSMUSG00000026705.10	Klhl20	ENSMUST00000148952.1	retained_intron	-
chr1_163060691_163062028	chr1	163060691	163062028	ENSMUSG00000026705.10	Klhl20	ENSMUST00000117467.1	protein_coding	-
chr1_163060691_163062028	chr1	163060691	163062028	ENSMUSG00000026705.10	Klhl20	ENSMUST00000111611.1	protein_coding	-
chr1_163060691_163062028	chr1	163060691	163062028	ENSMUSG00000026705.10	Klhl20	ENSMUST00000140905.1	retained_intron	-
chr1_163072294_163074001	chr1	163072294	163074001	ENSMUSG00000044835.9	Ankrd45	ENSMUST00000125018.1	protein_coding	+
chr1_163072294_163074001	chr1	163072294	163074001	ENSMUSG00000044835.9	Ankrd45	ENSMUST00000111608.1	protein_coding	+
chr1_163072294_163074001	chr1	163072294	163074001	ENSMUSG00000044835.9	Ankrd45	ENSMUST00000150721.1	nonsense_mediated_decay	+
chr1_163072294_163074001	chr1	163072294	163074001	ENSMUSG00000044835.9	Ankrd45	ENSMUST00000052245.8	protein_coding	+
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000130867.1	retained_intron	-
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000155135.1	processed_transcript	-
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000139387.1	processed_transcript	-
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000156318.1	processed_transcript	-
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000051925.4	protein_coding	-
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000156678.1	processed_transcript	-
chr1_163179632_163182490	chr1	163179632	163182490	ENSMUSG00000026701.9	Prdx6	ENSMUST00000071718.5	protein_coding	-
chr1_163325494_163327213	chr1	163325494	163327213	ENSMUSG00000026700.3	Tnfsf4	ENSMUST00000028024.3	protein_coding	+
chr1_163424273_163424989	chr1	163424273	163424989	ENSMUSG00000066755.2	Tnfsf18	ENSMUST00000086084.1	protein_coding	+
chr1_163717706_163719078	chr1	163717706	163719078	ENSMUSG00000000817.8	Fasl	ENSMUST00000074892.6	protein_coding	-
chr1_163717706_163719078	chr1	163717706	163719078	ENSMUSG00000000817.8	Fasl	ENSMUST00000000834.1	protein_coding	-
chr1_163805856_163807978	chr1	163805856	163807978	ENSMUSG00000040297.7	AI848100	ENSMUST00000048377.5	protein_coding	-
chr1_163898702_163900190	chr1	163898702	163900190	ENSMUSG00000026698.7	Pigc	ENSMUST00000111594.2	protein_coding	+
chr1_163898702_163900190	chr1	163898702	163900190	ENSMUSG00000026698.7	Pigc	ENSMUST00000028021.6	protein_coding	+
chr1_163898702_163900190	chr1	163898702	163900190	ENSMUSG00000026698.7	Pigc	ENSMUST00000161826.1	processed_transcript	+
chr1_163898702_163900190	chr1	163898702	163900190	ENSMUSG00000026698.7	Pigc	ENSMUST00000160881.1	protein_coding	+
chr1_163898702_163900190	chr1	163898702	163900190	ENSMUSG00000026698.7	Pigc	ENSMUST00000159648.1	protein_coding	+
chr1_163898702_163900190	chr1	163898702	163900190	ENSMUSG00000086277.2	4930558K02Rik	ENSMUST00000141397.1	processed_transcript	-
chr1_163909803_163910091	chr1	163909803	163910091	ENSMUSG00000086277.2	4930558K02Rik	ENSMUST00000162676.1	protein_coding	-
chr1_163934571_163935980	chr1	163934571	163935980	ENSMUSG00000090260.1	2810442N19Rik	ENSMUST00000161583.1	antisense	+
chr1_163934571_163935980	chr1	163934571	163935980	ENSMUSG00000090260.1	2810442N19Rik	ENSMUST00000160555.1	antisense	+
chr1_164064735_164064935	chr1	164064735	164064935	ENSMUSG00000040265.9	Dnm3	ENSMUST00000161539.1	processed_transcript	-
chr1_164147457_164148298	chr1	164147457	164148298	ENSMUSG00000078190.4	Dnm3os	ENSMUST00000139662.1	antisense	+
chr1_164147457_164148298	chr1	164147457	164148298	ENSMUSG00000078190.4	Dnm3os	ENSMUST00000104989.2	antisense	+
chr1_164147457_164148298	chr1	164147457	164148298	ENSMUSG00000070126.1	Mir199a-2	ENSMUST00000093618.1	miRNA	+
chr1_164225250_164226406	chr1	164225250	164226406	ENSMUSG00000040265.9	Dnm3	ENSMUST00000162330.1	processed_transcript	-
chr1_164225250_164226406	chr1	164225250	164226406	ENSMUSG00000040265.9	Dnm3	ENSMUST00000160665.1	protein_coding	-
chr1_164225250_164226406	chr1	164225250	164226406	ENSMUSG00000040265.9	Dnm3	ENSMUST00000159763.1	protein_coding	-
chr1_164243507_164244620	chr1	164243507	164244620	ENSMUSG00000040265.9	Dnm3	ENSMUST00000160173.1	processed_transcript	-
chr1_164407367_164408799	chr1	164407367	164408799	ENSMUSG00000066752.4	Gm10176	ENSMUST00000159707.1	protein_coding	+
chr1_164407367_164408799	chr1	164407367	164408799	ENSMUSG00000040265.9	Dnm3	ENSMUST00000161155.1	retained_intron	-
chr1_164407367_164408799	chr1	164407367	164408799	ENSMUSG00000040265.9	Dnm3	ENSMUST00000166279.1	protein_coding	-
chr1_164407367_164408799	chr1	164407367	164408799	ENSMUSG00000040265.9	Dnm3	ENSMUST00000070330.7	protein_coding	-
chr1_164407367_164408799	chr1	164407367	164408799	ENSMUSG00000040265.9	Dnm3	ENSMUST00000086074.5	protein_coding	-
chr1_164478007_164479497	chr1	164478007	164479497	ENSMUSG00000026694.11	Mettl13	ENSMUST00000161760.1	retained_intron	-
chr1_164478007_164479497	chr1	164478007	164479497	ENSMUSG00000026694.11	Mettl13	ENSMUST00000159255.1	retained_intron	-
chr1_164478007_164479497	chr1	164478007	164479497	ENSMUSG00000026694.11	Mettl13	ENSMUST00000159817.1	protein_coding	-
chr1_164478007_164479497	chr1	164478007	164479497	ENSMUSG00000026694.11	Mettl13	ENSMUST00000172292.1	protein_coding	-
chr1_164478007_164479497	chr1	164478007	164479497	ENSMUSG00000026694.11	Mettl13	ENSMUST00000159316.1	processed_transcript	-
chr1_164478007_164479497	chr1	164478007	164479497	ENSMUSG00000026694.11	Mettl13	ENSMUST00000028017.9	protein_coding	-
chr1_164500151_164502081	chr1	164500151	164502081	ENSMUSG00000026696.8	Vamp4	ENSMUST00000132158.1	protein_coding	+
chr1_164500151_164502081	chr1	164500151	164502081	ENSMUSG00000026696.8	Vamp4	ENSMUST00000135241.1	protein_coding	+
chr1_164500151_164502081	chr1	164500151	164502081	ENSMUSG00000026696.8	Vamp4	ENSMUST00000128704.1	retained_intron	+
chr1_164500151_164502081	chr1	164500151	164502081	ENSMUSG00000026696.8	Vamp4	ENSMUST00000050010.4	protein_coding	+
chr1_164500151_164502081	chr1	164500151	164502081	ENSMUSG00000026696.8	Vamp4	ENSMUST00000150040.1	protein_coding	+
chr1_164500151_164502081	chr1	164500151	164502081	ENSMUSG00000026696.8	Vamp4	ENSMUST00000155003.1	protein_coding	+
chr1_164504849_164505161	chr1	164504849	164505161	ENSMUSG00000026696.8	Vamp4	ENSMUST00000138499.1	processed_transcript	+
chr1_164669433_164671375	chr1	164669433	164671375	ENSMUSG00000040225.7	Prrc2c	ENSMUST00000028016.7	protein_coding	-
chr1_164669433_164671375	chr1	164669433	164671375	ENSMUSG00000040225.7	Prrc2c	ENSMUST00000046646.7	protein_coding	-
chr1_164669433_164671375	chr1	164669433	164671375	ENSMUSG00000040225.7	Prrc2c	ENSMUST00000046632.6	protein_coding	-
chr1_164743286_164744550	chr1	164743286	164744550	ENSMUSG00000026692.6	Fmo4	ENSMUST00000140274.1	protein_coding	-
chr1_164743286_164744550	chr1	164743286	164744550	ENSMUSG00000026692.6	Fmo4	ENSMUST00000144916.1	protein_coding	-
chr1_164743286_164744550	chr1	164743286	164744550	ENSMUSG00000026692.6	Fmo4	ENSMUST00000140031.1	retained_intron	-
chr1_164743286_164744550	chr1	164743286	164744550	ENSMUSG00000026692.6	Fmo4	ENSMUST00000111525.1	protein_coding	-
chr1_164789604_164790669	chr1	164789604	164790669	ENSMUSG00000040181.8	Fmo1	ENSMUST00000111518.1	protein_coding	-
chr1_164789604_164790669	chr1	164789604	164790669	ENSMUSG00000040181.8	Fmo1	ENSMUST00000131058.1	protein_coding	-
chr1_164789604_164790669	chr1	164789604	164790669	ENSMUSG00000040181.8	Fmo1	ENSMUST00000134098.1	protein_coding	-
chr1_164796193_164796904	chr1	164796193	164796904	ENSMUSG00000040181.8	Fmo1	ENSMUST00000046049.7	protein_coding	-
chr1_164827996_164829047	chr1	164827996	164829047	ENSMUSG00000040170.7	Fmo2	ENSMUST00000147617.1	retained_intron	-
chr1_164827996_164829047	chr1	164827996	164829047	ENSMUSG00000040170.7	Fmo2	ENSMUST00000156860.1	retained_intron	-
chr1_164827996_164829047	chr1	164827996	164829047	ENSMUSG00000040170.7	Fmo2	ENSMUST00000143123.1	protein_coding	-
chr1_164827996_164829047	chr1	164827996	164829047	ENSMUSG00000040170.7	Fmo2	ENSMUST00000111510.1	protein_coding	-
chr1_164827996_164829047	chr1	164827996	164829047	ENSMUSG00000040170.7	Fmo2	ENSMUST00000045902.6	protein_coding	-
chr1_164984681_164984917	chr1	164984681	164984917	ENSMUSG00000077608.1	SNORA17	ENSMUST00000104420.1	snoRNA	-
chr1_165015661_165015875	chr1	165015661	165015875	ENSMUSG00000071890.4	4921528O07Rik	ENSMUST00000096608.4	protein_coding	-
chr1_165210258_165211236	chr1	165210258	165211236	ENSMUSG00000092188.1	Gm20471	ENSMUST00000172793.1	antisense	+
chr1_165243106_165245173	chr1	165243106	165245173	ENSMUSG00000026586.8	Prrx1	ENSMUST00000174098.1	retained_intron	-
chr1_165243106_165245173	chr1	165243106	165245173	ENSMUSG00000026586.8	Prrx1	ENSMUST00000174397.1	protein_coding	-
chr1_165243106_165245173	chr1	165243106	165245173	ENSMUSG00000026586.8	Prrx1	ENSMUST00000075805.6	protein_coding	-
chr1_165243106_165245173	chr1	165243106	165245173	ENSMUSG00000026586.8	Prrx1	ENSMUST00000027878.7	protein_coding	-
chr1_165333289_165334436	chr1	165333289	165334436	ENSMUSG00000040124.4	Gorab	ENSMUST00000045138.4	protein_coding	-
chr1_165654796_165655783	chr1	165654796	165655783	ENSMUSG00000040113.8	Mettl11b	ENSMUST00000160495.1	nonsense_mediated_decay	-
chr1_165654796_165655783	chr1	165654796	165655783	ENSMUSG00000040113.8	Mettl11b	ENSMUST00000159679.1	protein_coding	-
chr1_165709078_165710534	chr1	165709078	165710534	ENSMUSG00000026585.7	Kifap3	ENSMUST00000077642.5	protein_coding	+
chr1_165709078_165710534	chr1	165709078	165710534	ENSMUSG00000026585.7	Kifap3	ENSMUST00000027877.6	protein_coding	+
chr1_165859006_165861833	chr1	165859006	165861833	ENSMUSG00000026584.7	Scyl3	ENSMUST00000161908.1	protein_coding	+
chr1_165859006_165861833	chr1	165859006	165861833	ENSMUSG00000026584.7	Scyl3	ENSMUST00000027876.4	protein_coding	+
chr1_165859006_165861833	chr1	165859006	165861833	ENSMUSG00000026584.7	Scyl3	ENSMUST00000170359.1	protein_coding	+
chr1_165859006_165861833	chr1	165859006	165861833	ENSMUSG00000026584.7	Scyl3	ENSMUST00000162234.1	nonsense_mediated_decay	+
chr1_165859006_165861833	chr1	165859006	165861833	ENSMUSG00000026584.7	Scyl3	ENSMUST00000168836.1	protein_coding	+
chr1_165891244_165892014	chr1	165891244	165892014	ENSMUSG00000041406.7	BC055324	ENSMUST00000159617.1	nonsense_mediated_decay	-
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041396.7	2810422O20Rik	ENSMUST00000045694.7	protein_coding	+
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041396.7	2810422O20Rik	ENSMUST00000111490.1	protein_coding	+
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041406.7	BC055324	ENSMUST00000162949.1	processed_transcript	-
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041406.7	BC055324	ENSMUST00000160926.1	nonsense_mediated_decay	-
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041406.7	BC055324	ENSMUST00000045876.6	protein_coding	-
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041406.7	BC055324	ENSMUST00000111491.1	protein_coding	-
chr1_165924348_165925808	chr1	165924348	165925808	ENSMUSG00000041406.7	BC055324	ENSMUST00000097493.3	protein_coding	-
chr1_165978275_165978503	chr1	165978275	165978503	ENSMUSG00000026582.6	Sele	ENSMUST00000027874.5	protein_coding	+
chr1_165991401_165992766	chr1	165991401	165992766	ENSMUSG00000026581.7	Sell	ENSMUST00000097491.3	protein_coding	+
chr1_165991401_165992766	chr1	165991401	165992766	ENSMUSG00000026581.7	Sell	ENSMUST00000027871.7	protein_coding	+
chr1_165991401_165992766	chr1	165991401	165992766	ENSMUSG00000026581.7	Sell	ENSMUST00000167117.1	protein_coding	+
chr1_166053350_166053695	chr1	166053350	166053695	ENSMUSG00000026580.9	Selp	ENSMUST00000086043.5	protein_coding	+
chr1_166074749_166075260	chr1	166074749	166075260	ENSMUSG00000026580.9	Selp	ENSMUST00000161020.1	retained_intron	+
chr1_166081352_166082144	chr1	166081352	166082144	ENSMUSG00000026579.8	F5	ENSMUST00000086040.5	protein_coding	+
chr1_166082212_166083897	chr1	166082212	166083897	ENSMUSG00000086593.2	Gm16548	ENSMUST00000133341.2	lincRNA	-
chr1_166177654_166180628	chr1	166177654	166180628	ENSMUSG00000040918.6	Slc19a2	ENSMUST00000044021.5	protein_coding	+
chr1_166177654_166180628	chr1	166177654	166180628	ENSMUSG00000040918.6	Slc19a2	ENSMUST00000159230.1	protein_coding	+
chr1_166177654_166180628	chr1	166177654	166180628	ENSMUSG00000040918.6	Slc19a2	ENSMUST00000169394.1	protein_coding	+
chr1_166190340_166192412	chr1	166190340	166192412	ENSMUSG00000040918.6	Slc19a2	ENSMUST00000160773.1	retained_intron	+
chr1_166205302_166206432	chr1	166205302	166206432	ENSMUSG00000026578.6	4930455F23Rik	ENSMUST00000027867.6	protein_coding	+
chr1_166236983_166238375	chr1	166236983	166238375	ENSMUSG00000026577.7	Blzf1	ENSMUST00000148884.1	retained_intron	-
chr1_166236983_166238375	chr1	166236983	166238375	ENSMUSG00000026577.7	Blzf1	ENSMUST00000124007.1	processed_transcript	-
chr1_166236983_166238375	chr1	166236983	166238375	ENSMUSG00000026577.7	Blzf1	ENSMUST00000086032.3	protein_coding	-
chr1_166236983_166238375	chr1	166236983	166238375	ENSMUSG00000026577.7	Blzf1	ENSMUST00000120447.1	protein_coding	-
chr1_166236983_166238375	chr1	166236983	166238375	ENSMUSG00000026577.7	Blzf1	ENSMUST00000027866.4	protein_coding	-
chr1_166256601_166258868	chr1	166256601	166258868	ENSMUSG00000026575.9	Nme7	ENSMUST00000171778.1	protein_coding	+
chr1_166387676_166389957	chr1	166387676	166389957	ENSMUSG00000026576.7	Atp1b1	ENSMUST00000027863.7	protein_coding	-
chr1_166432375_166434035	chr1	166432375	166434035	ENSMUSG00000086116.1	Gm16608	ENSMUST00000129684.1	lincRNA	+
chr1_166726660_166727365	chr1	166726660	166727365	ENSMUSG00000026574.4	Dpt	ENSMUST00000027861.4	protein_coding	+
chr1_166865732_166866658	chr1	166865732	166866658	ENSMUSG00000026573.7	Xcl1	ENSMUST00000027860.7	protein_coding	-
chr1_167083714_167084645	chr1	167083714	167084645	ENSMUSG00000026572.5	Tbx19	ENSMUST00000161144.1	protein_coding	-
chr1_167123492_167125235	chr1	167123492	167125235	ENSMUSG00000040848.6	Sft2d2	ENSMUST00000043338.4	protein_coding	-
chr1_167166111_167168162	chr1	167166111	167168162	ENSMUSG00000040843.5	Tiprl	ENSMUST00000156102.1	processed_transcript	-
chr1_167166111_167168162	chr1	167166111	167168162	ENSMUSG00000040843.5	Tiprl	ENSMUST00000142191.1	processed_transcript	-
chr1_167166111_167168162	chr1	167166111	167168162	ENSMUSG00000040843.5	Tiprl	ENSMUST00000043235.5	protein_coding	-
chr1_167232742_167233671	chr1	167232742	167233671	ENSMUSG00000040836.8	Gpr161	ENSMUST00000111450.1	protein_coding	+
chr1_167370688_167372280	chr1	167370688	167372280	ENSMUSG00000089299.1	SNORA17	ENSMUST00000158674.1	snoRNA	+
chr1_167390371_167392260	chr1	167390371	167392260	ENSMUSG00000026568.5	Brp44	ENSMUST00000027853.5	protein_coding	+
chr1_167390371_167392260	chr1	167390371	167392260	ENSMUSG00000026568.5	Brp44	ENSMUST00000128633.1	retained_intron	+
chr1_167390371_167392260	chr1	167390371	167392260	ENSMUSG00000026571.7	Dcaf6	ENSMUST00000027856.7	protein_coding	-
chr1_167414552_167415569	chr1	167414552	167415569	ENSMUSG00000026567.9	Adcy10	ENSMUST00000027852.8	protein_coding	+
chr1_167414552_167415569	chr1	167414552	167415569	ENSMUSG00000026567.9	Adcy10	ENSMUST00000111440.1	protein_coding	+
chr1_167414552_167415569	chr1	167414552	167415569	ENSMUSG00000026567.9	Adcy10	ENSMUST00000148550.1	nonsense_mediated_decay	+
chr1_167414552_167415569	chr1	167414552	167415569	ENSMUSG00000026567.9	Adcy10	ENSMUST00000111437.2	protein_coding	+
chr1_167414552_167415569	chr1	167414552	167415569	ENSMUSG00000026567.9	Adcy10	ENSMUST00000111439.1	protein_coding	+
chr1_167414552_167415569	chr1	167414552	167415569	ENSMUSG00000026567.9	Adcy10	ENSMUST00000155216.1	nonsense_mediated_decay	+
chr1_167563957_167565381	chr1	167563957	167565381	ENSMUSG00000026566.9	Mpzl1	ENSMUST00000111435.2	protein_coding	-
chr1_167563957_167565381	chr1	167563957	167565381	ENSMUSG00000026566.9	Mpzl1	ENSMUST00000068705.7	protein_coding	-
chr1_167637268_167638748	chr1	167637268	167638748	ENSMUSG00000040723.8	Rcsd1	ENSMUST00000040357.8	protein_coding	-
chr1_167637268_167638748	chr1	167637268	167638748	ENSMUSG00000040723.8	Rcsd1	ENSMUST00000097474.3	protein_coding	-
chr1_167693057_167694903	chr1	167693057	167694903	ENSMUSG00000040713.6	Creg1	ENSMUST00000111432.3	protein_coding	+
chr1_167693057_167694903	chr1	167693057	167694903	ENSMUSG00000040713.6	Creg1	ENSMUST00000140769.1	nonsense_mediated_decay	+
chr1_167699113_167699640	chr1	167699113	167699640	ENSMUSG00000040713.6	Creg1	ENSMUST00000040298.4	protein_coding	+
chr1_167710023_167711899	chr1	167710023	167711899	ENSMUSG00000089829.1	Gm16565	ENSMUST00000159138.1	processed_transcript	+
chr1_167718622_167720585	chr1	167718622	167720585	ENSMUSG00000005763.8	Cd247	ENSMUST00000161971.1	protein_coding	+
chr1_167718622_167720585	chr1	167718622	167720585	ENSMUSG00000005763.8	Cd247	ENSMUST00000005907.5	protein_coding	+
chr1_167718622_167720585	chr1	167718622	167720585	ENSMUSG00000005763.8	Cd247	ENSMUST00000027849.3	protein_coding	+
chr1_167718622_167720585	chr1	167718622	167720585	ENSMUSG00000005763.8	Cd247	ENSMUST00000086002.4	nonsense_mediated_decay	+
chr1_167718622_167720585	chr1	167718622	167720585	ENSMUSG00000005763.8	Cd247	ENSMUST00000161559.1	protein_coding	+
chr1_167788422_167788910	chr1	167788422	167788910	ENSMUSG00000005763.8	Cd247	ENSMUST00000159070.1	processed_transcript	+
chr1_167794658_167795078	chr1	167794658	167795078	ENSMUSG00000005763.8	Cd247	ENSMUST00000162411.1	processed_transcript	+
chr1_167864677_167866062	chr1	167864677	167866062	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000082225.4	protein_coding	-
chr1_167864677_167866062	chr1	167864677	167866062	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000111427.1	protein_coding	-
chr1_167864677_167866062	chr1	167864677	167866062	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000069609.4	protein_coding	-
chr1_167864677_167866062	chr1	167864677	167866062	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000111426.2	protein_coding	-
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000091458.1	Gm17444	ENSMUST00000169452.1	lincRNA	+
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000111429.2	protein_coding	-
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000027850.7	protein_coding	-
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000111424.1	protein_coding	-
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000160908.1	protein_coding	-
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000159212.1	protein_coding	-
chr1_167932300_167933802	chr1	167932300	167933802	ENSMUSG00000026565.9	Pou2f1	ENSMUST00000160260.1	protein_coding	-
chr1_168056828_168058283	chr1	168056828	168058283	ENSMUSG00000026564.4	Dusp27	ENSMUST00000085992.2	protein_coding	-
chr1_168060105_168060896	chr1	168060105	168060896	ENSMUSG00000000544.8	Gpa33	ENSMUST00000060833.7	protein_coding	+
chr1_168060105_168060896	chr1	168060105	168060896	ENSMUSG00000000544.8	Gpa33	ENSMUST00000166159.1	protein_coding	+
chr1_168060105_168060896	chr1	168060105	168060896	ENSMUSG00000000544.8	Gpa33	ENSMUST00000027847.6	processed_transcript	+
chr1_168060105_168060896	chr1	168060105	168060896	ENSMUSG00000000544.8	Gpa33	ENSMUST00000166860.1	protein_coding	+
chr1_168168211_168169227	chr1	168168211	168169227	ENSMUSG00000040629.3	Mael	ENSMUST00000038782.3	protein_coding	-
chr1_168183913_168185431	chr1	168183913	168185431	ENSMUSG00000040612.7	Ildr2	ENSMUST00000111416.1	protein_coding	+
chr1_168183913_168185431	chr1	168183913	168185431	ENSMUSG00000040612.7	Ildr2	ENSMUST00000172080.1	protein_coding	+
chr1_168183913_168185431	chr1	168183913	168185431	ENSMUSG00000040612.7	Ildr2	ENSMUST00000168893.1	protein_coding	+
chr1_168183913_168185431	chr1	168183913	168185431	ENSMUSG00000040612.7	Ildr2	ENSMUST00000164894.1	protein_coding	+
chr1_168183913_168185431	chr1	168183913	168185431	ENSMUSG00000040612.7	Ildr2	ENSMUST00000165809.1	protein_coding	+
chr1_168183913_168185431	chr1	168183913	168185431	ENSMUSG00000040612.7	Ildr2	ENSMUST00000038620.7	protein_coding	+
chr1_168238719_168239910	chr1	168238719	168239910	ENSMUSG00000091393.1	5330438I03Rik	ENSMUST00000168347.1	protein_coding	-
chr1_168308307_168310434	chr1	168308307	168310434	ENSMUSG00000026563.7	Tada1	ENSMUST00000027846.7	protein_coding	+
chr1_168308307_168310434	chr1	168308307	168310434	ENSMUSG00000026563.7	Tada1	ENSMUST00000138148.1	retained_intron	+
chr1_168308307_168310434	chr1	168308307	168310434	ENSMUSG00000026563.7	Tada1	ENSMUST00000138284.1	retained_intron	+
chr1_168308307_168310434	chr1	168308307	168310434	ENSMUSG00000026563.7	Tada1	ENSMUST00000132817.1	nonsense_mediated_decay	+
chr1_168308307_168310434	chr1	168308307	168310434	ENSMUSG00000089853.1	Gm15853	ENSMUST00000160268.1	antisense	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000127596.1	protein_coding	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000128861.1	protein_coding	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000148243.1	nonsense_mediated_decay	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000169324.1	protein_coding	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000111411.2	protein_coding	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000131487.1	protein_coding	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000079972.6	protein_coding	-
chr1_168338942_168340676	chr1	168338942	168340676	ENSMUSG00000040596.9	Pogk	ENSMUST00000135673.1	protein_coding	-
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000060568.7	Fam78b	ENSMUST00000165874.1	protein_coding	+
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000060568.7	Fam78b	ENSMUST00000074640.6	protein_coding	+
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000060568.7	Fam78b	ENSMUST00000156025.1	nonsense_mediated_decay	+
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000060568.7	Fam78b	ENSMUST00000126198.1	protein_coding	+
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000060568.7	Fam78b	ENSMUST00000122929.1	nonsense_mediated_decay	+
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000060568.7	Fam78b	ENSMUST00000128373.1	nonsense_mediated_decay	+
chr1_168930233_168933319	chr1	168930233	168933319	ENSMUSG00000086622.1	Gm16701	ENSMUST00000149894.1	lincRNA	-
chr1_169213706_169215837	chr1	169213706	169215837	ENSMUSG00000026558.8	Uck2	ENSMUST00000027839.8	protein_coding	-
chr1_169238055_169239318	chr1	169238055	169239318	ENSMUSG00000052428.5	Tmco1	ENSMUST00000097473.4	protein_coding	+
chr1_169270097_169271028	chr1	169270097	169271028	ENSMUSG00000088246.1	mmu-mir-2134-1	ENSMUST00000157621.1	miRNA	-
chr1_169279405_169281555	chr1	169279405	169281555	ENSMUSG00000026687.9	Aldh9a1	ENSMUST00000028004.9	protein_coding	+
chr1_169322277_169324861	chr1	169322277	169324861	ENSMUSG00000026688.5	Mgst3	ENSMUST00000028005.2	protein_coding	-
chr1_169396047_169397712	chr1	169396047	169397712	ENSMUSG00000040485.4	Lrrc52	ENSMUST00000036643.4	protein_coding	-
chr1_169528246_169529362	chr1	169528246	169529362	ENSMUSG00000015843.4	Rxrg	ENSMUST00000015987.3	protein_coding	+
chr1_169528246_169529362	chr1	169528246	169529362	ENSMUSG00000015843.4	Rxrg	ENSMUST00000111386.1	protein_coding	+
chr1_169528246_169529362	chr1	169528246	169529362	ENSMUSG00000015843.4	Rxrg	ENSMUST00000111384.1	protein_coding	+
chr1_169547858_169549023	chr1	169547858	169549023	ENSMUSG00000015843.4	Rxrg	ENSMUST00000111380.1	protein_coding	+
chr1_169618616_169619348	chr1	169618616	169619348	ENSMUSG00000026686.8	Lmx1a	ENSMUST00000111377.1	protein_coding	+
chr1_170094430_170095696	chr1	170094430	170095696	ENSMUSG00000052534.7	Pbx1	ENSMUST00000097471.2	protein_coding	-
chr1_170361440_170361661	chr1	170361440	170361661	ENSMUSG00000052534.7	Pbx1	ENSMUST00000064438.3	protein_coding	-
chr1_170362084_170363097	chr1	170362084	170363097	ENSMUSG00000052534.7	Pbx1	ENSMUST00000072863.3	protein_coding	-
chr1_171461234_171462642	chr1	171461234	171462642	ENSMUSG00000026683.7	Nuf2	ENSMUST00000111363.1	protein_coding	-
chr1_171461234_171462642	chr1	171461234	171462642	ENSMUSG00000026683.7	Nuf2	ENSMUST00000028000.7	protein_coding	-
chr1_171461234_171462642	chr1	171461234	171462642	ENSMUSG00000026683.7	Nuf2	ENSMUST00000111368.1	protein_coding	-
chr1_171585398_171586077	chr1	171585398	171586077	ENSMUSG00000026678.5	Rgs5	ENSMUST00000027997.3	protein_coding	+
chr1_171585398_171586077	chr1	171585398	171586077	ENSMUSG00000026678.5	Rgs5	ENSMUST00000152809.1	nonsense_mediated_decay	+
chr1_171677126_171679031	chr1	171677126	171679031	ENSMUSG00000038530.5	Rgs4	ENSMUST00000132567.1	retained_intron	-
chr1_171677126_171679031	chr1	171677126	171679031	ENSMUSG00000038530.5	Rgs4	ENSMUST00000111357.1	protein_coding	-
chr1_171677126_171679031	chr1	171677126	171679031	ENSMUSG00000038530.5	Rgs4	ENSMUST00000027991.5	protein_coding	-
chr1_171858109_171859088	chr1	171858109	171859088	ENSMUSG00000070532.3	1700084C01Rik	ENSMUST00000094348.3	protein_coding	+
chr1_171863783_171864842	chr1	171863783	171864842	ENSMUSG00000089990.1	Gm15852	ENSMUST00000159701.1	processed_transcript	-
chr1_171898613_171900015	chr1	171898613	171900015	ENSMUSG00000085494.1	3110045C21Rik	ENSMUST00000131172.1	lincRNA	+
chr1_171898613_171900015	chr1	171898613	171900015	ENSMUSG00000026675.6	Hsd17b7	ENSMUST00000111353.3	protein_coding	-
chr1_171898613_171900015	chr1	171898613	171900015	ENSMUSG00000026675.6	Hsd17b7	ENSMUST00000027989.6	protein_coding	-
chr1_172039940_172041380	chr1	172039940	172041380	ENSMUSG00000026674.3	Ddr2	ENSMUST00000027985.2	protein_coding	-
chr1_172073905_172074404	chr1	172073905	172074404	ENSMUSG00000026670.9	Uap1	ENSMUST00000161492.1	retained_intron	-
chr1_172091957_172092702	chr1	172091957	172092702	ENSMUSG00000026670.9	Uap1	ENSMUST00000160848.1	processed_transcript	-
chr1_172104065_172105830	chr1	172104065	172105830	ENSMUSG00000026670.9	Uap1	ENSMUST00000161112.1	retained_intron	-
chr1_172104065_172105830	chr1	172104065	172105830	ENSMUSG00000026670.9	Uap1	ENSMUST00000162253.1	retained_intron	-
chr1_172104065_172105830	chr1	172104065	172105830	ENSMUSG00000026670.9	Uap1	ENSMUST00000027981.7	protein_coding	-
chr1_172104065_172105830	chr1	172104065	172105830	ENSMUSG00000026670.9	Uap1	ENSMUST00000111351.3	protein_coding	-
chr1_172104065_172105830	chr1	172104065	172105830	ENSMUSG00000026670.9	Uap1	ENSMUST00000111350.3	protein_coding	-
chr1_172144543_172145732	chr1	172144543	172145732	ENSMUSG00000044306.2	4930500M09Rik	ENSMUST00000159201.1	protein_coding	+
chr1_172144543_172145732	chr1	172144543	172145732	ENSMUSG00000044306.2	4930500M09Rik	ENSMUST00000055830.1	protein_coding	+
chr1_172144543_172145732	chr1	172144543	172145732	ENSMUSG00000026667.8	Uhmk1	ENSMUST00000027979.7	protein_coding	-
chr1_172144543_172145732	chr1	172144543	172145732	ENSMUSG00000026667.8	Uhmk1	ENSMUST00000150821.1	protein_coding	-
chr1_172144543_172145732	chr1	172144543	172145732	ENSMUSG00000026667.8	Uhmk1	ENSMUST00000123399.1	protein_coding	-
chr1_172207146_172207556	chr1	172207146	172207556	ENSMUSG00000026673.2	Sh2d1b1	ENSMUST00000027984.2	protein_coding	+
chr1_172254432_172254882	chr1	172254432	172254882	ENSMUSG00000038473.8	Nos1ap	ENSMUST00000162090.1	processed_transcript	-
chr1_172518079_172520481	chr1	172518079	172520481	ENSMUSG00000066715.1	Gm10174	ENSMUST00000085967.1	protein_coding	+
chr1_172518079_172520481	chr1	172518079	172520481	ENSMUSG00000038473.8	Nos1ap	ENSMUST00000159665.1	retained_intron	-
chr1_172518079_172520481	chr1	172518079	172520481	ENSMUSG00000038473.8	Nos1ap	ENSMUST00000161485.1	protein_coding	-
chr1_172518079_172520481	chr1	172518079	172520481	ENSMUSG00000038473.8	Nos1ap	ENSMUST00000161966.1	protein_coding	-
chr1_172518079_172520481	chr1	172518079	172520481	ENSMUSG00000038473.8	Nos1ap	ENSMUST00000160456.1	protein_coding	-
chr1_172574056_172575211	chr1	172574056	172575211	ENSMUSG00000038463.8	Olfml2b	ENSMUST00000046792.8	protein_coding	+
chr1_172681956_172682614	chr1	172681956	172682614	ENSMUSG00000064611.1	U6	ENSMUST00000082677.1	snRNA	-
chr1_172797014_172799172	chr1	172797014	172799172	ENSMUSG00000053925.4	Gm9929	ENSMUST00000171747.1	processed_transcript	+
chr1_172797014_172799172	chr1	172797014	172799172	ENSMUSG00000026663.5	Atf6	ENSMUST00000027974.5	protein_coding	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000172042.1	protein_coding	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000166393.1	nonsense_mediated_decay	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000046476.6	nonsense_mediated_decay	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000171447.1	protein_coding	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000163252.1	nonsense_mediated_decay	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000027970.7	protein_coding	-
chr1_172814349_172816021	chr1	172814349	172816021	ENSMUSG00000026659.7	Dusp12	ENSMUST00000170420.1	nonsense_mediated_decay	-
chr1_172857196_172857977	chr1	172857196	172857977	ENSMUSG00000038421.7	Fcrla	ENSMUST00000161050.1	processed_transcript	-
chr1_172857196_172857977	chr1	172857196	172857977	ENSMUSG00000038421.7	Fcrla	ENSMUST00000162887.1	protein_coding	-
chr1_172857196_172857977	chr1	172857196	172857977	ENSMUSG00000038421.7	Fcrla	ENSMUST00000162136.1	protein_coding	-
chr1_172857196_172857977	chr1	172857196	172857977	ENSMUSG00000038421.7	Fcrla	ENSMUST00000159171.1	protein_coding	-
chr1_172857196_172857977	chr1	172857196	172857977	ENSMUSG00000038421.7	Fcrla	ENSMUST00000046322.7	protein_coding	-
chr1_172905456_172906806	chr1	172905456	172906806	ENSMUSG00000026656.9	Fcgr2b	ENSMUST00000161730.1	retained_intron	-
chr1_172905456_172906806	chr1	172905456	172906806	ENSMUSG00000026656.9	Fcgr2b	ENSMUST00000160106.1	retained_intron	-
chr1_172905456_172906806	chr1	172905456	172906806	ENSMUSG00000026656.9	Fcgr2b	ENSMUST00000159688.1	protein_coding	-
chr1_172905456_172906806	chr1	172905456	172906806	ENSMUSG00000026656.9	Fcgr2b	ENSMUST00000159969.1	nonsense_mediated_decay	-
chr1_172905456_172906806	chr1	172905456	172906806	ENSMUSG00000026656.9	Fcgr2b	ENSMUST00000027966.7	protein_coding	-
chr1_172905456_172906806	chr1	172905456	172906806	ENSMUSG00000026656.9	Fcgr2b	ENSMUST00000081103.5	protein_coding	-
chr1_172948845_172949121	chr1	172948845	172949121	ENSMUSG00000059089.4	Fcgr4	ENSMUST00000078825.4	protein_coding	+
chr1_172989194_172989770	chr1	172989194	172989770	ENSMUSG00000059498.6	Fcgr3	ENSMUST00000169017.1	protein_coding	-
chr1_172989194_172989770	chr1	172989194	172989770	ENSMUSG00000059498.6	Fcgr3	ENSMUST00000164044.1	protein_coding	-
chr1_172989194_172989770	chr1	172989194	172989770	ENSMUSG00000059498.6	Fcgr3	ENSMUST00000027964.7	protein_coding	-
chr1_173043852_173044456	chr1	173043852	173044456	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000129651.1	protein_coding	+
chr1_173043852_173044456	chr1	173043852	173044456	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000151340.1	protein_coding	+
chr1_173051598_173052231	chr1	173051598	173052231	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000027959.4	protein_coding	+
chr1_173051598_173052231	chr1	173051598	173052231	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000148200.1	processed_transcript	+
chr1_173052940_173053735	chr1	173052940	173053735	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000127394.1	protein_coding	+
chr1_173052940_173053735	chr1	173052940	173053735	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000143623.1	nonsense_mediated_decay	+
chr1_173052940_173053735	chr1	173052940	173053735	ENSMUSG00000026649.8	1700009P17Rik	ENSMUST00000156789.1	processed_transcript	+
chr1_173080239_173081853	chr1	173080239	173081853	ENSMUSG00000056569.4	Mpz	ENSMUST00000070758.3	protein_coding	+
chr1_173080239_173081853	chr1	173080239	173081853	ENSMUSG00000058076.6	Sdhc	ENSMUST00000155798.1	protein_coding	-
chr1_173080239_173081853	chr1	173080239	173081853	ENSMUSG00000058076.6	Sdhc	ENSMUST00000081560.4	protein_coding	-
chr1_173080239_173081853	chr1	173080239	173081853	ENSMUSG00000058076.6	Sdhc	ENSMUST00000111336.3	protein_coding	-
chr1_173089526_173090199	chr1	173089526	173090199	ENSMUSG00000056569.4	Mpz	ENSMUST00000149352.1	processed_transcript	+
chr1_173089526_173090199	chr1	173089526	173090199	ENSMUSG00000056569.4	Mpz	ENSMUST00000125565.1	processed_transcript	+
chr1_173125147_173126683	chr1	173125147	173126683	ENSMUSG00000038370.6	Pcp4l1	ENSMUST00000111332.1	protein_coding	-
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000005820.4	protein_coding	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000075469.5	protein_coding	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000155126.1	nonsense_mediated_decay	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000137298.1	retained_intron	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000133075.1	nonsense_mediated_decay	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000152865.1	retained_intron	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000111328.1	protein_coding	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000149404.1	retained_intron	+
chr1_173143870_173145312	chr1	173143870	173145312	ENSMUSG00000005677.7	Nr1i3	ENSMUST00000132954.1	nonsense_mediated_decay	+
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000130529.1	retained_intron	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000154106.1	processed_transcript	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000147246.1	protein_coding	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000138184.1	protein_coding	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000143405.1	nonsense_mediated_decay	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000005817.2	protein_coding	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000111326.1	protein_coding	-
chr1_173150823_173153265	chr1	173150823	173153265	ENSMUSG00000005674.3	Tomm40l	ENSMUST00000111327.1	protein_coding	-
chr1_173154927_173155429	chr1	173154927	173155429	ENSMUSG00000005681.6	Apoa2	ENSMUST00000111321.1	protein_coding	+
chr1_173154927_173155429	chr1	173154927	173155429	ENSMUSG00000005681.6	Apoa2	ENSMUST00000005824.5	protein_coding	+
chr1_173154927_173155429	chr1	173154927	173155429	ENSMUSG00000005681.6	Apoa2	ENSMUST00000111320.1	protein_coding	+
chr1_173154927_173155429	chr1	173154927	173155429	ENSMUSG00000005681.6	Apoa2	ENSMUST00000111319.1	protein_coding	+
chr1_173164267_173164967	chr1	173164267	173164967	ENSMUSG00000058715.6	Fcer1g	ENSMUST00000150997.1	retained_intron	-
chr1_173164267_173164967	chr1	173164267	173164967	ENSMUSG00000058715.6	Fcer1g	ENSMUST00000079957.6	protein_coding	-
chr1_173165780_173166343	chr1	173165780	173166343	ENSMUSG00000013593.6	Ndufs2	ENSMUST00000138069.1	retained_intron	-
chr1_173167619_173167863	chr1	173167619	173167863	ENSMUSG00000013593.6	Ndufs2	ENSMUST00000150108.1	processed_transcript	-
chr1_173170114_173170781	chr1	173170114	173170781	ENSMUSG00000013593.6	Ndufs2	ENSMUST00000131286.1	protein_coding	-
chr1_173176649_173178037	chr1	173176649	173178037	ENSMUSG00000013593.6	Ndufs2	ENSMUST00000013737.6	protein_coding	-
chr1_173176649_173178037	chr1	173176649	173178037	ENSMUSG00000013593.6	Ndufs2	ENSMUST00000136976.1	retained_intron	-
chr1_173176649_173178037	chr1	173176649	173178037	ENSMUSG00000013593.6	Ndufs2	ENSMUST00000111318.1	protein_coding	-
chr1_173180406_173180800	chr1	173180406	173180800	ENSMUSG00000006403.6	Adamts4	ENSMUST00000111315.1	protein_coding	+
chr1_173180406_173180800	chr1	173180406	173180800	ENSMUSG00000006403.6	Adamts4	ENSMUST00000006570.5	protein_coding	+
chr1_173181783_173182442	chr1	173181783	173182442	ENSMUSG00000006403.6	Adamts4	ENSMUST00000111314.1	protein_coding	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000064272.3	protein_coding	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000151863.1	processed_transcript	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000141999.1	protein_coding	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000111313.3	protein_coding	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000123954.1	retained_intron	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000126699.1	processed_transcript	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000129985.1	retained_intron	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000138904.1	processed_transcript	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000125939.1	retained_intron	+
chr1_173199862_173201623	chr1	173199862	173201623	ENSMUSG00000052423.8	B4galt3	ENSMUST00000141114.1	protein_coding	+
chr1_173201845_173202119	chr1	173201845	173202119	ENSMUSG00000052423.8	B4galt3	ENSMUST00000141114.1	protein_coding	+
chr1_173210390_173212107	chr1	173210390	173212107	ENSMUSG00000062729.5	Ppox	ENSMUST00000133050.1	retained_intron	-
chr1_173210390_173212107	chr1	173210390	173212107	ENSMUSG00000062729.5	Ppox	ENSMUST00000151442.1	retained_intron	-
chr1_173210390_173212107	chr1	173210390	173212107	ENSMUSG00000062729.5	Ppox	ENSMUST00000145019.1	processed_transcript	-
chr1_173210390_173212107	chr1	173210390	173212107	ENSMUSG00000062729.5	Ppox	ENSMUST00000073120.4	protein_coding	-
chr1_173210390_173212107	chr1	173210390	173212107	ENSMUSG00000062729.5	Ppox	ENSMUST00000152689.1	retained_intron	-
chr1_173210390_173212107	chr1	173210390	173212107	ENSMUSG00000062729.5	Ppox	ENSMUST00000155083.1	retained_intron	-
chr1_173217236_173218648	chr1	173217236	173218648	ENSMUSG00000053483.7	Usp21	ENSMUST00000153164.1	retained_intron	-
chr1_173217236_173218648	chr1	173217236	173218648	ENSMUSG00000053483.7	Usp21	ENSMUST00000127101.1	retained_intron	-
chr1_173217236_173218648	chr1	173217236	173218648	ENSMUSG00000053483.7	Usp21	ENSMUST00000149187.1	nonsense_mediated_decay	-
chr1_173217236_173218648	chr1	173217236	173218648	ENSMUSG00000053483.7	Usp21	ENSMUST00000111306.3	protein_coding	-
chr1_173217236_173218648	chr1	173217236	173218648	ENSMUSG00000053483.7	Usp21	ENSMUST00000111305.1	protein_coding	-
chr1_173217236_173218648	chr1	173217236	173218648	ENSMUSG00000053483.7	Usp21	ENSMUST00000065941.5	protein_coding	-
chr1_173223657_173225480	chr1	173223657	173225480	ENSMUSG00000062963.4	Ufc1	ENSMUST00000152621.1	retained_intron	-
chr1_173223657_173225480	chr1	173223657	173225480	ENSMUSG00000062963.4	Ufc1	ENSMUST00000111302.3	protein_coding	-
chr1_173223657_173225480	chr1	173223657	173225480	ENSMUSG00000062963.4	Ufc1	ENSMUST00000144576.1	nonsense_mediated_decay	-
chr1_173223657_173225480	chr1	173223657	173225480	ENSMUSG00000062963.4	Ufc1	ENSMUST00000080001.2	protein_coding	-
chr1_173237567_173238373	chr1	173237567	173238373	ENSMUSG00000087747.1	SNORA40	ENSMUST00000157122.1	snoRNA	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000111300.1	protein_coding	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000111299.1	protein_coding	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000064950.4	protein_coding	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000142063.1	protein_coding	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000129116.1	protein_coding	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000135150.1	protein_coding	+
chr1_173258191_173260696	chr1	173258191	173260696	ENSMUSG00000013973.6	Dedd	ENSMUST00000157015.1	protein_coding	+
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000006412.4	Pfdn2	ENSMUST00000135941.1	protein_coding	+
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000006412.4	Pfdn2	ENSMUST00000006579.4	protein_coding	+
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000148339.1	protein_coding	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000136339.1	retained_intron	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000156856.1	protein_coding	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000111295.1	protein_coding	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000141357.1	retained_intron	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000111289.1	protein_coding	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000111296.1	protein_coding	-
chr1_173274119_173276625	chr1	173274119	173276625	ENSMUSG00000013997.4	Nit1	ENSMUST00000146428.1	retained_intron	-
chr1_173285961_173286427	chr1	173285961	173286427	ENSMUSG00000006412.4	Pfdn2	ENSMUST00000138323.1	processed_transcript	+
chr1_173290254_173292145	chr1	173290254	173292145	ENSMUSG00000045259.4	Klhdc9	ENSMUST00000061878.4	protein_coding	-
chr1_173299940_173300929	chr1	173299940	173300929	ENSMUSG00000006411.6	Pvrl4	ENSMUST00000111286.2	protein_coding	+
chr1_173299940_173300929	chr1	173299940	173300929	ENSMUSG00000006411.6	Pvrl4	ENSMUST00000006578.3	protein_coding	+
chr1_173299940_173300929	chr1	173299940	173300929	ENSMUSG00000006411.6	Pvrl4	ENSMUST00000094325.4	protein_coding	+
chr1_173318476_173319687	chr1	173318476	173319687	ENSMUSG00000048865.9	Arhgap30	ENSMUST00000056449.8	protein_coding	+
chr1_173318476_173319687	chr1	173318476	173319687	ENSMUSG00000048865.9	Arhgap30	ENSMUST00000135312.1	retained_intron	+
chr1_173318476_173319687	chr1	173318476	173319687	ENSMUSG00000048865.9	Arhgap30	ENSMUST00000131607.1	retained_intron	+
chr1_173318476_173319687	chr1	173318476	173319687	ENSMUSG00000048865.9	Arhgap30	ENSMUST00000111282.2	protein_coding	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000161241.1	protein_coding	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000001284.6	nonsense_mediated_decay	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000159207.1	protein_coding	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000161297.1	processed_transcript	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000160335.1	retained_intron	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000159466.1	retained_intron	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000160486.1	protein_coding	+
chr1_173340820_173342964	chr1	173340820	173342964	ENSMUSG00000026641.7	Usf1	ENSMUST00000167546.1	protein_coding	+
chr1_173347271_173349737	chr1	173347271	173349737	ENSMUSG00000026641.7	Usf1	ENSMUST00000159929.1	retained_intron	+
chr1_173347271_173349737	chr1	173347271	173349737	ENSMUSG00000026641.7	Usf1	ENSMUST00000159371.1	retained_intron	+
chr1_173347271_173349737	chr1	173347271	173349737	ENSMUSG00000091166.1	Tstd1	ENSMUST00000171362.1	protein_coding	+
chr1_173367273_173368312	chr1	173367273	173368312	ENSMUSG00000038235.4	F11r	ENSMUST00000043839.4	protein_coding	+
chr1_173367273_173368312	chr1	173367273	173368312	ENSMUSG00000038235.4	F11r	ENSMUST00000144497.1	retained_intron	+
chr1_173367273_173368312	chr1	173367273	173368312	ENSMUSG00000092117.1	Gm17520	ENSMUST00000138153.2	lincRNA	-
chr1_173432546_173434581	chr1	173432546	173434581	ENSMUSG00000060244.1	Refbp2	ENSMUST00000081527.1	protein_coding	+
chr1_173432546_173434581	chr1	173432546	173434581	ENSMUSG00000065033.1	U5	ENSMUST00000083099.1	snRNA	-
chr1_173432546_173434581	chr1	173432546	173434581	ENSMUSG00000091993.1	B930036N10Rik	ENSMUST00000165827.1	protein_coding	-
chr1_173445178_173445566	chr1	173445178	173445566	ENSMUSG00000038218.3	Gm9765	ENSMUST00000043170.3	protein_coding	+
chr1_173488659_173489539	chr1	173488659	173489539	ENSMUSG00000004709.8	Cd244	ENSMUST00000004829.7	protein_coding	+
chr1_173488659_173489539	chr1	173488659	173489539	ENSMUSG00000004709.8	Cd244	ENSMUST00000163487.1	protein_coding	+
chr1_173488659_173489539	chr1	173488659	173489539	ENSMUSG00000004709.8	Cd244	ENSMUST00000164360.1	protein_coding	+
chr1_173536769_173537878	chr1	173536769	173537878	ENSMUSG00000004707.8	Ly9	ENSMUST00000146596.1	retained_intron	-
chr1_173536769_173537878	chr1	173536769	173537878	ENSMUSG00000004707.8	Ly9	ENSMUST00000111277.1	protein_coding	-
chr1_173536769_173537878	chr1	173536769	173537878	ENSMUSG00000004707.8	Ly9	ENSMUST00000143463.1	nonsense_mediated_decay	-
chr1_173536769_173537878	chr1	173536769	173537878	ENSMUSG00000004707.8	Ly9	ENSMUST00000004827.7	protein_coding	-
chr1_173536769_173537878	chr1	173536769	173537878	ENSMUSG00000004707.8	Ly9	ENSMUST00000068878.7	protein_coding	-
chr1_173578748_173579459	chr1	173578748	173579459	ENSMUSG00000038179.7	Slamf7	ENSMUST00000111276.2	protein_coding	-
chr1_173578748_173579459	chr1	173578748	173579459	ENSMUSG00000038179.7	Slamf7	ENSMUST00000062219.3	protein_coding	-
chr1_173610813_173612555	chr1	173610813	173612555	ENSMUSG00000015355.7	Cd48	ENSMUST00000015499.7	protein_coding	+
chr1_173610813_173612555	chr1	173610813	173612555	ENSMUSG00000015355.7	Cd48	ENSMUST00000068584.5	protein_coding	+
chr1_173696735_173697704	chr1	173696735	173697704	ENSMUSG00000015316.9	Slamf1	ENSMUST00000015460.4	protein_coding	+
chr1_173696735_173697704	chr1	173696735	173697704	ENSMUSG00000015316.9	Slamf1	ENSMUST00000166183.1	protein_coding	+
chr1_173696735_173697704	chr1	173696735	173697704	ENSMUSG00000015316.9	Slamf1	ENSMUST00000163992.1	retained_intron	+
chr1_173769659_173769907	chr1	173769659	173769907	ENSMUSG00000038147.7	Cd84	ENSMUST00000155802.1	protein_coding	+
chr1_173769659_173769907	chr1	173769659	173769907	ENSMUSG00000038147.7	Cd84	ENSMUST00000128189.1	processed_transcript	+
chr1_173770534_173771175	chr1	173770534	173771175	ENSMUSG00000038147.7	Cd84	ENSMUST00000135386.1	protein_coding	+
chr1_173770534_173771175	chr1	173770534	173771175	ENSMUSG00000038147.7	Cd84	ENSMUST00000136479.1	protein_coding	+
chr1_173770534_173771175	chr1	173770534	173771175	ENSMUSG00000038147.7	Cd84	ENSMUST00000042302.6	protein_coding	+
chr1_173825421_173825651	chr1	173825421	173825651	ENSMUSG00000073492.2	Gm10521	ENSMUST00000097466.2	protein_coding	+
chr1_173847441_173848440	chr1	173847441	173848440	ENSMUSG00000015314.4	Slamf6	ENSMUST00000042184.2	protein_coding	+
chr1_173847441_173848440	chr1	173847441	173848440	ENSMUSG00000015314.4	Slamf6	ENSMUST00000171330.1	protein_coding	+
chr1_173847441_173848440	chr1	173847441	173848440	ENSMUSG00000015314.4	Slamf6	ENSMUST00000015458.3	protein_coding	+
chr1_173955826_173958191	chr1	173955826	173958191	ENSMUSG00000026556.9	Vangl2	ENSMUST00000138714.1	protein_coding	-
chr1_173955826_173958191	chr1	173955826	173958191	ENSMUSG00000026556.9	Vangl2	ENSMUST00000153662.1	protein_coding	-
chr1_173955826_173958191	chr1	173955826	173958191	ENSMUSG00000026556.9	Vangl2	ENSMUST00000111264.1	protein_coding	-
chr1_173955826_173958191	chr1	173955826	173958191	ENSMUSG00000026556.9	Vangl2	ENSMUST00000027837.6	protein_coding	-
chr1_173987461_173988657	chr1	173987461	173988657	ENSMUSG00000051251.3	Nhlh1	ENSMUST00000059794.3	protein_coding	-
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000026553.10	Copa	ENSMUST00000135192.1	protein_coding	+
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000026553.10	Copa	ENSMUST00000138407.1	retained_intron	+
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000026553.10	Copa	ENSMUST00000124289.1	nonsense_mediated_decay	+
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000026553.10	Copa	ENSMUST00000126634.1	retained_intron	+
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000026553.10	Copa	ENSMUST00000134468.1	retained_intron	+
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000026553.10	Copa	ENSMUST00000027833.5	protein_coding	+
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000003458.6	Ncstn	ENSMUST00000142825.1	retained_intron	-
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000003458.6	Ncstn	ENSMUST00000003550.4	protein_coding	-
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000003458.6	Ncstn	ENSMUST00000140643.1	nonsense_mediated_decay	-
chr1_174012227_174013571	chr1	174012227	174013571	ENSMUSG00000003458.6	Ncstn	ENSMUST00000146137.1	nonsense_mediated_decay	-
chr1_174025249_174025512	chr1	174025249	174025512	ENSMUSG00000026553.10	Copa	ENSMUST00000150298.1	processed_transcript	+
chr1_174029481_174030367	chr1	174029481	174030367	ENSMUSG00000026553.10	Copa	ENSMUST00000152403.1	nonsense_mediated_decay	+
chr1_174056409_174058107	chr1	174056409	174058107	ENSMUSG00000003464.7	Pex19	ENSMUST00000075895.2	protein_coding	+
chr1_174056409_174058107	chr1	174056409	174058107	ENSMUSG00000003464.7	Pex19	ENSMUST00000147799.1	retained_intron	+
chr1_174056409_174058107	chr1	174056409	174058107	ENSMUSG00000003464.7	Pex19	ENSMUST00000111252.3	protein_coding	+
chr1_174056409_174058107	chr1	174056409	174058107	ENSMUSG00000003464.7	Pex19	ENSMUST00000133546.1	retained_intron	+
chr1_174056409_174058107	chr1	174056409	174058107	ENSMUSG00000003464.7	Pex19	ENSMUST00000127662.1	retained_intron	+
chr1_174063428_174064216	chr1	174063428	174064216	ENSMUSG00000003464.7	Pex19	ENSMUST00000133081.1	retained_intron	+
chr1_174077704_174079962	chr1	174077704	174079962	ENSMUSG00000026554.9	Dcaf8	ENSMUST00000074144.5	protein_coding	+
chr1_174077704_174079962	chr1	174077704	174079962	ENSMUSG00000026554.9	Dcaf8	ENSMUST00000085918.5	protein_coding	+
chr1_174135911_174137688	chr1	174135911	174137688	ENSMUSG00000013698.6	Pea15a	ENSMUST00000152432.1	retained_intron	-
chr1_174135911_174137688	chr1	174135911	174137688	ENSMUSG00000013698.6	Pea15a	ENSMUST00000155109.1	protein_coding	-
chr1_174135911_174137688	chr1	174135911	174137688	ENSMUSG00000013698.6	Pea15a	ENSMUST00000013842.5	protein_coding	-
chr1_174135911_174137688	chr1	174135911	174137688	ENSMUSG00000013698.6	Pea15a	ENSMUST00000111247.1	protein_coding	-
chr1_174143983_174144282	chr1	174143983	174144282	ENSMUSG00000007122.4	Casq1	ENSMUST00000170638.1	retained_intron	-
chr1_174150076_174150384	chr1	174150076	174150384	ENSMUSG00000007122.4	Casq1	ENSMUST00000003554.4	protein_coding	-
chr1_174150076_174150384	chr1	174150076	174150384	ENSMUSG00000007122.4	Casq1	ENSMUST00000168901.1	protein_coding	-
chr1_174188041_174188752	chr1	174188041	174188752	ENSMUSG00000007107.5	Atp1a4	ENSMUST00000111243.1	protein_coding	-
chr1_174191644_174192090	chr1	174191644	174192090	ENSMUSG00000038034.9	Igsf8	ENSMUST00000155363.1	retained_intron	+
chr1_174191644_174192090	chr1	174191644	174192090	ENSMUSG00000038034.9	Igsf8	ENSMUST00000139528.1	protein_coding	+
chr1_174225819_174228613	chr1	174225819	174228613	ENSMUSG00000007097.8	Atp1a2	ENSMUST00000137679.1	protein_coding	-
chr1_174225819_174228613	chr1	174225819	174228613	ENSMUSG00000007097.8	Atp1a2	ENSMUST00000097464.2	protein_coding	-
chr1_174225819_174228613	chr1	174225819	174228613	ENSMUSG00000007097.8	Atp1a2	ENSMUST00000131751.1	retained_intron	-
chr1_174225819_174228613	chr1	174225819	174228613	ENSMUSG00000007097.8	Atp1a2	ENSMUST00000085913.4	protein_coding	-
chr1_174241031_174244034	chr1	174241031	174244034	ENSMUSG00000038034.9	Igsf8	ENSMUST00000085912.3	protein_coding	+
chr1_174241031_174244034	chr1	174241031	174244034	ENSMUSG00000038034.9	Igsf8	ENSMUST00000128508.1	protein_coding	+
chr1_174241031_174244034	chr1	174241031	174244034	ENSMUSG00000038034.9	Igsf8	ENSMUST00000039506.9	protein_coding	+
chr1_174258602_174260002	chr1	174258602	174260002	ENSMUSG00000038026.7	Kcnj9	ENSMUST00000062387.2	protein_coding	-
chr1_174270669_174271840	chr1	174270669	174271840	ENSMUSG00000044708.4	Kcnj10	ENSMUST00000163374.1	protein_coding	+
chr1_174270669_174271840	chr1	174270669	174271840	ENSMUSG00000044708.4	Kcnj10	ENSMUST00000056136.3	protein_coding	+
chr1_174270669_174271840	chr1	174270669	174271840	ENSMUSG00000044708.4	Kcnj10	ENSMUST00000165893.1	protein_coding	+
chr1_174306059_174307607	chr1	174306059	174307607	ENSMUSG00000050229.2	Pigm	ENSMUST00000052455.2	protein_coding	+
chr1_174404861_174405819	chr1	174404861	174405819	ENSMUSG00000026548.4	Slamf9	ENSMUST00000027830.4	protein_coding	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000127052.1	protein_coding	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000135267.1	protein_coding	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000140814.1	processed_transcript	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000075014.4	protein_coding	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000052629.6	protein_coding	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000132141.1	retained_intron	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000128638.1	retained_intron	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000127482.1	nonsense_mediated_decay	+
chr1_174411616_174412831	chr1	174411616	174412831	ENSMUSG00000037995.8	Igsf9	ENSMUST00000111235.2	protein_coding	+
chr1_174420068_174421166	chr1	174420068	174421166	ENSMUSG00000037995.8	Igsf9	ENSMUST00000141888.1	retained_intron	+
chr1_174423388_174424078	chr1	174423388	174424078	ENSMUSG00000037995.8	Igsf9	ENSMUST00000140816.1	retained_intron	+
chr1_174423388_174424078	chr1	174423388	174424078	ENSMUSG00000037995.8	Igsf9	ENSMUST00000155426.1	retained_intron	+
chr1_174429820_174433375	chr1	174429820	174433375	ENSMUSG00000026547.9	Tagln2	ENSMUST00000138296.1	retained_intron	+
chr1_174429820_174433375	chr1	174429820	174433375	ENSMUSG00000026547.9	Tagln2	ENSMUST00000111230.1	protein_coding	+
chr1_174429820_174433375	chr1	174429820	174433375	ENSMUSG00000026547.9	Tagln2	ENSMUST00000111228.1	protein_coding	+
chr1_174450536_174452064	chr1	174450536	174452064	ENSMUSG00000026546.10	Ccdc19	ENSMUST00000085894.5	protein_coding	+
chr1_174450536_174452064	chr1	174450536	174452064	ENSMUSG00000026546.10	Ccdc19	ENSMUST00000160531.1	retained_intron	+
chr1_174450536_174452064	chr1	174450536	174452064	ENSMUSG00000026546.10	Ccdc19	ENSMUST00000161140.1	protein_coding	+
chr1_174450536_174452064	chr1	174450536	174452064	ENSMUSG00000026546.10	Ccdc19	ENSMUST00000162988.1	protein_coding	+
chr1_174456486_174457249	chr1	174456486	174457249	ENSMUSG00000026546.10	Ccdc19	ENSMUST00000159395.1	protein_coding	+
chr1_174479362_174481351	chr1	174479362	174481351	ENSMUSG00000085184.2	4933439K11Rik	ENSMUST00000140307.2	lincRNA	-
chr1_174479362_174481351	chr1	174479362	174481351	ENSMUSG00000085184.2	4933439K11Rik	ENSMUST00000132370.2	lincRNA	-
chr1_174520457_174521060	chr1	174520457	174521060	ENSMUSG00000053318.6	Slamf8	ENSMUST00000065679.6	protein_coding	-
chr1_174562348_174563716	chr1	174562348	174563716	ENSMUSG00000026544.5	Dusp23	ENSMUST00000027826.5	protein_coding	-
chr1_174615124_174615843	chr1	174615124	174615843	ENSMUSG00000088813.1	7SK	ENSMUST00000158188.1	misc_RNA	-
chr1_174627368_174629213	chr1	174627368	174629213	ENSMUSG00000037942.3	Crp	ENSMUST00000038495.3	protein_coding	+
chr1_174627368_174629213	chr1	174627368	174629213	ENSMUSG00000037942.3	Crp	ENSMUST00000168258.1	protein_coding	+
chr1_174824168_174825967	chr1	174824168	174825967	ENSMUSG00000026542.5	Apcs	ENSMUST00000027824.5	protein_coding	-
chr1_175080306_175080506	chr1	175080306	175080506	ENSMUSG00000066680.2	Olfr1407-ps1	ENSMUST00000085885.2	pseudogene	+
chr1_175263431_175264378	chr1	175263431	175264378	ENSMUSG00000037872.4	Darc	ENSMUST00000038227.4	protein_coding	-
chr1_175296852_175298562	chr1	175296852	175298562	ENSMUSG00000005338.6	Cadm3	ENSMUST00000126963.1	retained_intron	-
chr1_175296852_175298562	chr1	175296852	175298562	ENSMUSG00000005338.6	Cadm3	ENSMUST00000157032.1	retained_intron	-
chr1_175296852_175298562	chr1	175296852	175298562	ENSMUSG00000005338.6	Cadm3	ENSMUST00000171979.1	protein_coding	-
chr1_175296852_175298562	chr1	175296852	175298562	ENSMUSG00000005338.6	Cadm3	ENSMUST00000171825.1	protein_coding	-
chr1_175296852_175298562	chr1	175296852	175298562	ENSMUSG00000005338.6	Cadm3	ENSMUST00000005470.4	protein_coding	-
chr1_175296852_175298562	chr1	175296852	175298562	ENSMUSG00000005338.6	Cadm3	ENSMUST00000111220.1	protein_coding	-
chr1_175348645_175349734	chr1	175348645	175349734	ENSMUSG00000037860.8	Aim2	ENSMUST00000174263.1	processed_transcript	+
chr1_175350410_175351042	chr1	175350410	175351042	ENSMUSG00000037860.8	Aim2	ENSMUST00000173023.1	protein_coding	+
chr1_175391907_175392212	chr1	175391907	175392212	ENSMUSG00000037860.8	Aim2	ENSMUST00000038028.5	protein_coding	+
chr1_175420621_175422039	chr1	175420621	175422039	ENSMUSG00000037849.7	Gm4955	ENSMUST00000160565.2	protein_coding	-
chr1_175465919_175466456	chr1	175465919	175466456	ENSMUSG00000070501.6	BC094916	ENSMUST00000170192.1	protein_coding	-
chr1_175465919_175466456	chr1	175465919	175466456	ENSMUSG00000070501.6	BC094916	ENSMUST00000097463.3	nonsense_mediated_decay	-
chr1_175465919_175466456	chr1	175465919	175466456	ENSMUSG00000070501.6	BC094916	ENSMUST00000090406.5	nonsense_mediated_decay	-
chr1_175465919_175466456	chr1	175465919	175466456	ENSMUSG00000070501.6	BC094916	ENSMUST00000139092.1	protein_coding	-
chr1_175528761_175530066	chr1	175528761	175530066	ENSMUSG00000073491.3	Pydc4	ENSMUST00000097462.2	protein_coding	-
chr1_175528761_175530066	chr1	175528761	175530066	ENSMUSG00000073491.3	Pydc4	ENSMUST00000169370.1	protein_coding	-
chr1_175528761_175530066	chr1	175528761	175530066	ENSMUSG00000073491.3	Pydc4	ENSMUST00000150649.1	protein_coding	-
chr1_175560223_175561227	chr1	175560223	175561227	ENSMUSG00000043263.8	Pyhin1	ENSMUST00000056071.7	protein_coding	+
chr1_175603102_175604501	chr1	175603102	175604501	ENSMUSG00000066677.4	Pydc3	ENSMUST00000085876.3	protein_coding	+
chr1_175671511_175672708	chr1	175671511	175672708	ENSMUSG00000073490.3	AI607873	ENSMUST00000042610.6	protein_coding	-
chr1_175671511_175672708	chr1	175671511	175672708	ENSMUSG00000073490.3	AI607873	ENSMUST00000127730.1	protein_coding	-
chr1_175696714_175698450	chr1	175696714	175698450	ENSMUSG00000073489.3	Ifi204	ENSMUST00000000264.6	protein_coding	-
chr1_175696714_175698450	chr1	175696714	175698450	ENSMUSG00000073489.3	Ifi204	ENSMUST00000111214.2	protein_coding	-
chr1_175732716_175733397	chr1	175732716	175733397	ENSMUSG00000090222.1	Gm16340	ENSMUST00000155076.1	transcribed_unprocessed_pseudogene	-
chr1_175842660_175845241	chr1	175842660	175845241	ENSMUSG00000026536.8	Mnda	ENSMUST00000009340.8	protein_coding	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000140143.1	processed_transcript	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000138143.1	retained_intron	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000135331.1	processed_transcript	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000129829.1	protein_coding	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000128430.1	processed_transcript	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000123708.1	protein_coding	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000156895.1	protein_coding	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000042228.8	protein_coding	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000039997.10	Ifi203	ENSMUST00000081216.5	protein_coding	-
chr1_175871748_175873163	chr1	175871748	175873163	ENSMUSG00000090272.1	Mndal	ENSMUST00000111210.2	protein_coding	-
chr1_175961647_175963324	chr1	175961647	175963324	ENSMUSG00000054203.6	Ifi205	ENSMUST00000059226.6	protein_coding	-
chr1_175970649_175971939	chr1	175970649	175971939	ENSMUSG00000045381.4	Olfr433	ENSMUST00000052975.4	protein_coding	+
chr1_175971981_175972974	chr1	175971981	175972974	ENSMUSG00000045381.4	Olfr433	ENSMUST00000052975.4	protein_coding	+
chr1_175980601_175981201	chr1	175980601	175981201	ENSMUSG00000047048.3	Olfr432	ENSMUST00000062665.3	protein_coding	+
chr1_176047682_176047983	chr1	176047682	176047983	ENSMUSG00000046486.3	Olfr231	ENSMUST00000063030.3	protein_coding	-
chr1_176081387_176081612	chr1	176081387	176081612	ENSMUSG00000091950.1	Olfr421	ENSMUST00000171570.1	protein_coding	+
chr1_176088811_176089691	chr1	176088811	176089691	ENSMUSG00000055033.3	Olfr420	ENSMUST00000068403.3	protein_coding	+
chr1_176102603_176103179	chr1	176102603	176103179	ENSMUSG00000026532.7	Spna1	ENSMUST00000027817.7	protein_coding	+
chr1_176431656_176434269	chr1	176431656	176434269	ENSMUSG00000028354.7	Fmn2	ENSMUST00000030039.7	protein_coding	+
chr1_176431656_176434269	chr1	176431656	176434269	ENSMUSG00000028354.7	Fmn2	ENSMUST00000165284.1	protein_coding	+
chr1_176431656_176434269	chr1	176431656	176434269	ENSMUSG00000028354.7	Fmn2	ENSMUST00000085858.5	protein_coding	+
chr1_176850932_176852324	chr1	176850932	176852324	ENSMUSG00000050069.3	Grem2	ENSMUST00000055294.3	protein_coding	-
chr1_177421250_177421521	chr1	177421250	177421521	ENSMUSG00000026527.7	Rgs7	ENSMUST00000085853.1	protein_coding	-
chr1_177421250_177421521	chr1	177421250	177421521	ENSMUSG00000026527.7	Rgs7	ENSMUST00000027812.5	protein_coding	-
chr1_177549952_177550446	chr1	177549952	177550446	ENSMUSG00000039783.9	Kmo	ENSMUST00000140474.1	nonsense_mediated_decay	+
chr1_177554788_177556849	chr1	177554788	177556849	ENSMUSG00000026526.7	Fh1	ENSMUST00000154956.1	processed_transcript	-
chr1_177554788_177556849	chr1	177554788	177556849	ENSMUSG00000026526.7	Fh1	ENSMUST00000027810.7	protein_coding	-
chr1_177561365_177562868	chr1	177561365	177562868	ENSMUSG00000039783.9	Kmo	ENSMUST00000040250.8	protein_coding	+
chr1_177561365_177562868	chr1	177561365	177562868	ENSMUSG00000039783.9	Kmo	ENSMUST00000142223.1	retained_intron	+
chr1_177561365_177562868	chr1	177561365	177562868	ENSMUSG00000039783.9	Kmo	ENSMUST00000150646.1	processed_transcript	+
chr1_177561365_177562868	chr1	177561365	177562868	ENSMUSG00000039783.9	Kmo	ENSMUST00000097458.3	protein_coding	+
chr1_177561365_177562868	chr1	177561365	177562868	ENSMUSG00000039783.9	Kmo	ENSMUST00000137174.1	processed_transcript	+
chr1_177621955_177624113	chr1	177621955	177624113	ENSMUSG00000026525.8	Opn3	ENSMUST00000165325.1	protein_coding	-
chr1_177621955_177624113	chr1	177621955	177624113	ENSMUSG00000026525.8	Opn3	ENSMUST00000027809.7	protein_coding	-
chr1_177810312_177811454	chr1	177810312	177811454	ENSMUSG00000039748.6	Exo1	ENSMUST00000039725.6	protein_coding	+
chr1_178143458_178144549	chr1	178143458	178144549	ENSMUSG00000055214.9	Pld5	ENSMUST00000156184.1	retained_intron	-
chr1_178143458_178144549	chr1	178143458	178144549	ENSMUSG00000055214.9	Pld5	ENSMUST00000111167.1	protein_coding	-
chr1_178204090_178206139	chr1	178204090	178206139	ENSMUSG00000055214.9	Pld5	ENSMUST00000111166.1	protein_coding	-
chr1_178204090_178206139	chr1	178204090	178206139	ENSMUSG00000055214.9	Pld5	ENSMUST00000144340.1	retained_intron	-
chr1_178204090_178206139	chr1	178204090	178206139	ENSMUSG00000055214.9	Pld5	ENSMUST00000125404.1	nonsense_mediated_decay	-
chr1_178204090_178206139	chr1	178204090	178206139	ENSMUSG00000055214.9	Pld5	ENSMUST00000065967.7	protein_coding	-
chr1_178684187_178684736	chr1	178684187	178684736	ENSMUSG00000057335.5	Cep170	ENSMUST00000164840.1	protein_coding	-
chr1_178724044_178724303	chr1	178724044	178724303	ENSMUSG00000084749.1	7SK	ENSMUST00000122800.1	misc_RNA	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000027785.8	protein_coding	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000150429.1	retained_intron	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000123409.1	nonsense_mediated_decay	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000133305.1	retained_intron	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000056773.8	protein_coding	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000116485.2	protein_coding	+
chr1_178743100_178745326	chr1	178743100	178745326	ENSMUSG00000057335.5	Cep170	ENSMUST00000070119.4	protein_coding	-
chr1_178809152_178810187	chr1	178809152	178810187	ENSMUSG00000093132.1	AC144905.1	ENSMUST00000175391.1	miRNA	+
chr1_178862816_178863042	chr1	178862816	178863042	ENSMUSG00000087082.1	Gm15423	ENSMUST00000150600.1	antisense	-
chr1_178927743_178928586	chr1	178927743	178928586	ENSMUSG00000026504.10	Sdccag8	ENSMUST00000139589.1	processed_transcript	+
chr1_179178651_179179296	chr1	179178651	179179296	ENSMUSG00000019699.9	Akt3	ENSMUST00000111160.2	protein_coding	-
chr1_179178651_179179296	chr1	179178651	179179296	ENSMUSG00000019699.9	Akt3	ENSMUST00000019843.8	protein_coding	-
chr1_179187082_179188181	chr1	179187082	179188181	ENSMUSG00000019699.9	Akt3	ENSMUST00000111159.1	protein_coding	-
chr1_179188423_179189878	chr1	179188423	179189878	ENSMUSG00000019699.9	Akt3	ENSMUST00000111159.1	protein_coding	-
chr1_179372691_179373929	chr1	179372691	179373929	ENSMUSG00000078909.2	Gm17407	ENSMUST00000171440.1	lincRNA	-
chr1_179374323_179374927	chr1	179374323	179374927	ENSMUSG00000063659.6	Zfp238	ENSMUST00000094276.3	protein_coding	+
chr1_179659254_179660181	chr1	179659254	179660181	ENSMUSG00000015962.5	1700016C15Rik	ENSMUST00000016106.5	protein_coding	+
chr1_179698482_179698682	chr1	179698482	179698682	ENSMUSG00000015961.8	Adss	ENSMUST00000159184.1	retained_intron	-
chr1_179725508_179727501	chr1	179725508	179727501	ENSMUSG00000015961.8	Adss	ENSMUST00000161808.1	retained_intron	-
chr1_179725508_179727501	chr1	179725508	179727501	ENSMUSG00000015961.8	Adss	ENSMUST00000016105.8	protein_coding	-
chr1_179958220_179958709	chr1	179958220	179958709	ENSMUSG00000065826.1	U6	ENSMUST00000083892.1	snRNA	-
chr1_180116810_180118230	chr1	180116810	180118230	ENSMUSG00000026502.7	Pppde1	ENSMUST00000161075.1	protein_coding	+
chr1_180116810_180118230	chr1	180116810	180118230	ENSMUSG00000026502.7	Pppde1	ENSMUST00000027783.7	protein_coding	+
chr1_180116810_180118230	chr1	180116810	180118230	ENSMUSG00000026502.7	Pppde1	ENSMUST00000159284.1	protein_coding	+
chr1_180205402_180207320	chr1	180205402	180207320	ENSMUSG00000070489.4	4930527J03Rik	ENSMUST00000094270.4	pseudogene	-
chr1_180247866_180250683	chr1	180247866	180250683	ENSMUSG00000026500.6	Fam36a	ENSMUST00000027781.6	protein_coding	+
chr1_180247866_180250683	chr1	180247866	180250683	ENSMUSG00000026500.6	Fam36a	ENSMUST00000154437.1	retained_intron	+
chr1_180247866_180250683	chr1	180247866	180250683	ENSMUSG00000086350.1	B230369F24Rik	ENSMUST00000141846.1	antisense	-
chr1_180259858_180260895	chr1	180259858	180260895	ENSMUSG00000039630.8	Hnrnpu	ENSMUST00000162916.1	retained_intron	-
chr1_180265987_180268886	chr1	180265987	180268886	ENSMUSG00000039630.8	Hnrnpu	ENSMUST00000134291.1	retained_intron	-
chr1_180265987_180268886	chr1	180265987	180268886	ENSMUSG00000039630.8	Hnrnpu	ENSMUST00000037748.7	protein_coding	-
chr1_180265987_180268886	chr1	180265987	180268886	ENSMUSG00000039630.8	Hnrnpu	ENSMUST00000161769.1	nonsense_mediated_decay	-
chr1_180335465_180337146	chr1	180335465	180337146	ENSMUSG00000026495.7	Efcab2	ENSMUST00000027775.7	protein_coding	+
chr1_180457276_180460261	chr1	180457276	180460261	ENSMUSG00000026494.6	Kif26b	ENSMUST00000161017.1	protein_coding	+
chr1_180728406_180729674	chr1	180728406	180729674	ENSMUSG00000026494.6	Kif26b	ENSMUST00000160789.1	protein_coding	+
chr1_180847319_180848047	chr1	180847319	180848047	ENSMUSG00000089713.1	Gm16564	ENSMUST00000162545.1	antisense	-
chr1_180919514_180920025	chr1	180919514	180920025	ENSMUSG00000055067.8	Smyd3	ENSMUST00000129393.1	processed_transcript	-
chr1_181179030_181179306	chr1	181179030	181179306	ENSMUSG00000055067.8	Smyd3	ENSMUST00000068437.6	processed_transcript	-
chr1_181304074_181304427	chr1	181304074	181304427	ENSMUSG00000055067.8	Smyd3	ENSMUST00000131684.1	processed_transcript	-
chr1_181446981_181448690	chr1	181446981	181448690	ENSMUSG00000055067.8	Smyd3	ENSMUST00000111133.2	protein_coding	-
chr1_181446981_181448690	chr1	181446981	181448690	ENSMUSG00000055067.8	Smyd3	ENSMUST00000111134.1	protein_coding	-
chr1_181446981_181448690	chr1	181446981	181448690	ENSMUSG00000055067.8	Smyd3	ENSMUST00000128302.1	protein_coding	-
chr1_181475729_181477542	chr1	181475729	181477542	ENSMUSG00000038949.8	Cnst	ENSMUST00000040706.8	protein_coding	+
chr1_181475729_181477542	chr1	181475729	181477542	ENSMUSG00000038949.8	Cnst	ENSMUST00000144370.1	retained_intron	+
chr1_181475729_181477542	chr1	181475729	181477542	ENSMUSG00000038949.8	Cnst	ENSMUST00000153962.1	retained_intron	+
chr1_181475729_181477542	chr1	181475729	181477542	ENSMUSG00000026492.5	Tfb2m	ENSMUST00000129009.1	processed_transcript	-
chr1_181475729_181477542	chr1	181475729	181477542	ENSMUSG00000026492.5	Tfb2m	ENSMUST00000129982.1	processed_transcript	-
chr1_181475729_181477542	chr1	181475729	181477542	ENSMUSG00000026492.5	Tfb2m	ENSMUST00000027769.5	protein_coding	-
chr1_181522962_181523698	chr1	181522962	181523698	ENSMUSG00000038949.8	Cnst	ENSMUST00000143270.1	processed_transcript	+
chr1_181597617_181599394	chr1	181597617	181599394	ENSMUSG00000038936.6	Sccpdh	ENSMUST00000040538.3	protein_coding	+
chr1_181597617_181599394	chr1	181597617	181599394	ENSMUSG00000038936.6	Sccpdh	ENSMUST00000134287.1	nonsense_mediated_decay	+
chr1_181597617_181599394	chr1	181597617	181599394	ENSMUSG00000038936.6	Sccpdh	ENSMUST00000131039.1	retained_intron	+
chr1_181597617_181599394	chr1	181597617	181599394	ENSMUSG00000038936.6	Sccpdh	ENSMUST00000111126.1	protein_coding	+
chr1_181683226_181683845	chr1	181683226	181683845	ENSMUSG00000026491.7	Ahctf1	ENSMUST00000151734.1	retained_intron	-
chr1_181732812_181734774	chr1	181732812	181734774	ENSMUSG00000073486.2	Gm10518	ENSMUST00000097454.2	protein_coding	+
chr1_181732812_181734774	chr1	181732812	181734774	ENSMUSG00000026491.7	Ahctf1	ENSMUST00000147137.1	retained_intron	-
chr1_181732812_181734774	chr1	181732812	181734774	ENSMUSG00000026491.7	Ahctf1	ENSMUST00000027768.7	protein_coding	-
chr1_181888704_181890848	chr1	181888704	181890848	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000097453.2	protein_coding	+
chr1_181888704_181890848	chr1	181888704	181890848	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000111117.1	protein_coding	+
chr1_181888704_181890848	chr1	181888704	181890848	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000134959.1	processed_transcript	+
chr1_181891079_181892237	chr1	181891079	181892237	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000134959.1	processed_transcript	+
chr1_181891079_181892237	chr1	181891079	181892237	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000097452.3	protein_coding	+
chr1_181891079_181892237	chr1	181891079	181892237	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000076687.5	protein_coding	+
chr1_181891079_181892237	chr1	181891079	181892237	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000097450.3	protein_coding	+
chr1_181904667_181906361	chr1	181904667	181906361	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000143350.1	processed_transcript	+
chr1_182031355_182031762	chr1	182031355	182031762	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000133890.1	protein_coding	+
chr1_182091284_182092411	chr1	182091284	182092411	ENSMUSG00000026490.10	Cdc42bpa	ENSMUST00000129754.1	retained_intron	+
chr1_182112876_182113490	chr1	182112876	182113490	ENSMUSG00000026489.7	Adck3	ENSMUST00000162725.1	protein_coding	-
chr1_182123755_182123955	chr1	182123755	182123955	ENSMUSG00000026489.7	Adck3	ENSMUST00000159914.1	protein_coding	-
chr1_182123755_182123955	chr1	182123755	182123955	ENSMUSG00000026489.7	Adck3	ENSMUST00000160482.1	protein_coding	-
chr1_182123755_182123955	chr1	182123755	182123955	ENSMUSG00000026489.7	Adck3	ENSMUST00000170472.1	protein_coding	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000161746.1	protein_coding	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000160102.1	nonsense_mediated_decay	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000160121.1	nonsense_mediated_decay	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000161814.1	protein_coding	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000161379.1	processed_transcript	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000162769.1	processed_transcript	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000160169.1	nonsense_mediated_decay	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000160879.1	processed_transcript	-
chr1_182124977_182127025	chr1	182124977	182127025	ENSMUSG00000026489.7	Adck3	ENSMUST00000027766.6	protein_coding	-
chr1_182129179_182130083	chr1	182129179	182130083	ENSMUSG00000026489.7	Adck3	ENSMUST00000161743.1	protein_coding	-
chr1_182159634_182160694	chr1	182159634	182160694	ENSMUSG00000010609.9	Psen2	ENSMUST00000130029.1	processed_transcript	-
chr1_182159634_182160694	chr1	182159634	182160694	ENSMUSG00000010609.9	Psen2	ENSMUST00000136291.1	processed_transcript	-
chr1_182159634_182160694	chr1	182159634	182160694	ENSMUSG00000010609.9	Psen2	ENSMUST00000130711.1	processed_transcript	-
chr1_182175716_182176596	chr1	182175716	182176596	ENSMUSG00000010609.9	Psen2	ENSMUST00000111104.1	protein_coding	-
chr1_182175716_182176596	chr1	182175716	182176596	ENSMUSG00000010609.9	Psen2	ENSMUST00000010753.7	protein_coding	-
chr1_182177666_182178430	chr1	182177666	182178430	ENSMUSG00000010609.9	Psen2	ENSMUST00000111105.1	protein_coding	-
chr1_182185304_182187236	chr1	182185304	182187236	ENSMUSG00000010609.9	Psen2	ENSMUST00000149590.1	retained_intron	-
chr1_182185304_182187236	chr1	182185304	182187236	ENSMUSG00000010609.9	Psen2	ENSMUST00000111108.3	protein_coding	-
chr1_182193511_182194070	chr1	182193511	182194070	ENSMUSG00000010609.9	Psen2	ENSMUST00000133340.1	protein_coding	-
chr1_182259528_182263067	chr1	182259528	182263067	ENSMUSG00000038855.8	Itpkb	ENSMUST00000097449.2	protein_coding	+
chr1_182259528_182263067	chr1	182259528	182263067	ENSMUSG00000038855.8	Itpkb	ENSMUST00000070181.6	protein_coding	+
chr1_182259528_182263067	chr1	182259528	182263067	ENSMUSG00000055676.2	Gm5069	ENSMUST00000050581.2	protein_coding	-
chr1_182412270_182414667	chr1	182412270	182414667	ENSMUSG00000053963.5	6330403A02Rik	ENSMUST00000136521.1	protein_coding	-
chr1_182498470_182500088	chr1	182498470	182500088	ENSMUSG00000026496.6	Parp1	ENSMUST00000027777.6	protein_coding	+
chr1_182569996_182572570	chr1	182569996	182572570	ENSMUSG00000058729.6	Lin9	ENSMUST00000085803.5	protein_coding	+
chr1_182569996_182572570	chr1	182569996	182572570	ENSMUSG00000058729.6	Lin9	ENSMUST00000085804.4	protein_coding	+
chr1_182626244_182627437	chr1	182626244	182627437	ENSMUSG00000026497.7	Mixl1	ENSMUST00000027778.7	protein_coding	-
chr1_182655257_182657029	chr1	182655257	182657029	ENSMUSG00000026499.4	Acbd3	ENSMUST00000027780.4	protein_coding	+
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000073485.3	Gm16067	ENSMUST00000159740.1	antisense	+
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000073485.3	Gm16067	ENSMUST00000097448.2	antisense	+
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000159685.1	protein_coding	-
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000162118.1	protein_coding	-
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000159441.1	retained_intron	-
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000159789.1	protein_coding	-
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000162814.1	protein_coding	-
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000081026.4	protein_coding	-
chr1_182742555_182744824	chr1	182742555	182744824	ENSMUSG00000060743.6	H3f3a	ENSMUST00000161308.1	protein_coding	-
chr1_182779957_182781612	chr1	182779957	182781612	ENSMUSG00000038806.6	BC031781	ENSMUST00000038091.6	protein_coding	+
chr1_182824236_182824614	chr1	182824236	182824614	ENSMUSG00000066652.5	Lefty2	ENSMUST00000155546.1	retained_intron	+
chr1_182833817_182835247	chr1	182833817	182835247	ENSMUSG00000026520.7	Pycr2	ENSMUST00000027802.7	protein_coding	+
chr1_182865949_182867446	chr1	182865949	182867446	ENSMUSG00000038793.8	Lefty1	ENSMUST00000132087.1	retained_intron	+
chr1_182871713_182873261	chr1	182871713	182873261	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000161847.1	protein_coding	+
chr1_182871713_182873261	chr1	182871713	182873261	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000162283.1	nonsense_mediated_decay	+
chr1_182871713_182873261	chr1	182871713	182873261	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000027800.8	protein_coding	+
chr1_182871713_182873261	chr1	182871713	182873261	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000159436.1	protein_coding	+
chr1_182875319_182876206	chr1	182875319	182876206	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000160508.1	protein_coding	+
chr1_182875319_182876206	chr1	182875319	182876206	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000160536.1	protein_coding	+
chr1_182876626_182876943	chr1	182876626	182876943	ENSMUSG00000026519.9	Tmem63a	ENSMUST00000163894.1	protein_coding	+
chr1_182888011_182888451	chr1	182888011	182888451	ENSMUSG00000085563.2	2210411M09Rik	ENSMUST00000128545.2	antisense	-
chr1_182946613_182948056	chr1	182946613	182948056	ENSMUSG00000038776.7	Ephx1	ENSMUST00000036928.5	protein_coding	-
chr1_182946613_182948056	chr1	182946613	182948056	ENSMUSG00000038776.7	Ephx1	ENSMUST00000111068.1	protein_coding	-
chr1_182950683_182951908	chr1	182950683	182951908	ENSMUSG00000038776.7	Ephx1	ENSMUST00000147585.1	protein_coding	-
chr1_183073753_183075428	chr1	183073753	183075428	ENSMUSG00000026516.7	Nvl	ENSMUST00000027797.7	protein_coding	-
chr1_183080502_183081942	chr1	183080502	183081942	ENSMUSG00000062169.7	Cnih4	ENSMUST00000134115.1	protein_coding	+
chr1_183080502_183081942	chr1	183080502	183081942	ENSMUSG00000062169.7	Cnih4	ENSMUST00000111059.1	protein_coding	+
chr1_183139806_183141766	chr1	183139806	183141766	ENSMUSG00000038733.6	Wdr26	ENSMUST00000036329.5	nonsense_mediated_decay	-
chr1_183139806_183141766	chr1	183139806	183141766	ENSMUSG00000038733.6	Wdr26	ENSMUST00000162963.1	protein_coding	-
chr1_183139806_183141766	chr1	183139806	183141766	ENSMUSG00000038733.6	Wdr26	ENSMUST00000162819.1	protein_coding	-
chr1_183141891_183143146	chr1	183141891	183143146	ENSMUSG00000038733.6	Wdr26	ENSMUST00000111053.2	protein_coding	-
chr1_183282200_183284883	chr1	183282200	183284883	ENSMUSG00000026514.7	Cnih3	ENSMUST00000161880.1	protein_coding	+
chr1_183282200_183284883	chr1	183282200	183284883	ENSMUSG00000026514.7	Cnih3	ENSMUST00000027795.7	protein_coding	+
chr1_183282200_183284883	chr1	183282200	183284883	ENSMUSG00000026514.7	Cnih3	ENSMUST00000162685.1	protein_coding	+
chr1_183440665_183441851	chr1	183440665	183441851	ENSMUSG00000050625.4	Ccdc121	ENSMUST00000058825.4	protein_coding	-
chr1_183771294_183773440	chr1	183771294	183773440	ENSMUSG00000004880.6	Lbr	ENSMUST00000005003.6	protein_coding	-
chr1_183781341_183784060	chr1	183781341	183784060	ENSMUSG00000056699.6	Gm5533	ENSMUST00000070987.6	protein_coding	-
chr1_183948598_183951646	chr1	183948598	183951646	ENSMUSG00000022995.9	Enah	ENSMUST00000078719.6	protein_coding	-
chr1_183948598_183951646	chr1	183948598	183951646	ENSMUSG00000022995.9	Enah	ENSMUST00000111030.3	protein_coding	-
chr1_183948598_183951646	chr1	183948598	183951646	ENSMUSG00000022995.9	Enah	ENSMUST00000111024.3	protein_coding	-
chr1_183948598_183951646	chr1	183948598	183951646	ENSMUSG00000022995.9	Enah	ENSMUST00000111025.2	protein_coding	-
chr1_184054452_184055738	chr1	184054452	184055738	ENSMUSG00000026511.6	Srp9	ENSMUST00000111018.1	protein_coding	+
chr1_184054452_184055738	chr1	184054452	184055738	ENSMUSG00000026511.6	Srp9	ENSMUST00000027792.5	protein_coding	+
chr1_184211954_184213722	chr1	184211954	184213722	ENSMUSG00000038633.5	Degs1	ENSMUST00000133052.1	protein_coding	-
chr1_184211954_184213722	chr1	184211954	184213722	ENSMUSG00000038633.5	Degs1	ENSMUST00000132551.1	retained_intron	-
chr1_184211954_184213722	chr1	184211954	184213722	ENSMUSG00000038633.5	Degs1	ENSMUST00000035295.5	protein_coding	-
chr1_184270740_184272514	chr1	184270740	184272514	ENSMUSG00000047539.4	Fbxo28	ENSMUST00000051431.4	protein_coding	-
chr1_184338219_184339895	chr1	184338219	184339895	ENSMUSG00000026510.9	Trp53bp2	ENSMUST00000117245.1	protein_coding	+
chr1_184338219_184339895	chr1	184338219	184339895	ENSMUSG00000073482.1	Gm10517	ENSMUST00000097444.1	protein_coding	-
chr1_184413540_184414691	chr1	184413540	184414691	ENSMUSG00000087419.2	Gm16721	ENSMUST00000139175.2	protein_coding	+
chr1_184446767_184448097	chr1	184446767	184448097	ENSMUSG00000026509.9	Capn2	ENSMUST00000111003.3	protein_coding	-
chr1_184446767_184448097	chr1	184446767	184448097	ENSMUSG00000026509.9	Capn2	ENSMUST00000068505.7	protein_coding	-
chr1_184494516_184495246	chr1	184494516	184495246	ENSMUSG00000038599.8	Capn8	ENSMUST00000048941.7	protein_coding	+
chr1_184494516_184495246	chr1	184494516	184495246	ENSMUSG00000038599.8	Capn8	ENSMUST00000168514.1	protein_coding	+
chr1_184678671_184678994	chr1	184678671	184678994	ENSMUSG00000043429.6	4922505E12Rik	ENSMUST00000165785.1	protein_coding	-
chr1_184678998_184679492	chr1	184678998	184679492	ENSMUSG00000043429.6	4922505E12Rik	ENSMUST00000060041.5	protein_coding	-
chr1_184693301_184695627	chr1	184693301	184695627	ENSMUSG00000038576.8	Susd4	ENSMUST00000155229.1	processed_transcript	+
chr1_184693301_184695627	chr1	184693301	184695627	ENSMUSG00000038576.8	Susd4	ENSMUST00000153348.1	protein_coding	+
chr1_184693301_184695627	chr1	184693301	184695627	ENSMUSG00000038576.8	Susd4	ENSMUST00000085724.3	protein_coding	+
chr1_184693301_184695627	chr1	184693301	184695627	ENSMUSG00000038576.8	Susd4	ENSMUST00000048739.6	protein_coding	+
chr1_184884397_184885442	chr1	184884397	184885442	ENSMUSG00000079164.2	Tlr5	ENSMUST00000110997.1	protein_coding	+
chr1_184902247_184902880	chr1	184902247	184902880	ENSMUSG00000079164.2	Tlr5	ENSMUST00000168453.1	protein_coding	+
chr1_185836545_185837626	chr1	185836545	185837626	ENSMUSG00000039384.8	Dusp10	ENSMUST00000139839.1	protein_coding	+
chr1_185856986_185859309	chr1	185856986	185859309	ENSMUSG00000039384.8	Dusp10	ENSMUST00000048655.7	protein_coding	+
chr1_185856986_185859309	chr1	185856986	185859309	ENSMUSG00000044854.4	1700056E22Rik	ENSMUST00000050306.4	protein_coding	-
chr1_186555480_186557428	chr1	186555480	186557428	ENSMUSG00000039377.6	Hlx	ENSMUST00000174257.1	protein_coding	-
chr1_186555480_186557428	chr1	186555480	186557428	ENSMUSG00000039377.6	Hlx	ENSMUST00000048572.6	protein_coding	-
chr1_186634601_186636343	chr1	186634601	186636343	ENSMUSG00000026621.6	Mosc1	ENSMUST00000048462.6	protein_coding	-
chr1_186634601_186636343	chr1	186634601	186636343	ENSMUSG00000026621.6	Mosc1	ENSMUST00000110992.1	protein_coding	-
chr1_186646433_186646752	chr1	186646433	186646752	ENSMUSG00000088559.1	Mir1981	ENSMUST00000157934.1	miRNA	-
chr1_186646433_186646752	chr1	186646433	186646752	ENSMUSG00000073481.3	Mosc2	ENSMUST00000161341.1	retained_intron	-
chr1_186650789_186651678	chr1	186650789	186651678	ENSMUSG00000073481.3	Mosc2	ENSMUST00000162866.1	processed_transcript	-
chr1_186650789_186651678	chr1	186650789	186651678	ENSMUSG00000073481.3	Mosc2	ENSMUST00000162261.1	processed_transcript	-
chr1_186650789_186651678	chr1	186650789	186651678	ENSMUSG00000073481.3	Mosc2	ENSMUST00000161359.1	processed_transcript	-
chr1_186668893_186670758	chr1	186668893	186670758	ENSMUSG00000073481.3	Mosc2	ENSMUST00000160982.1	retained_intron	-
chr1_186668893_186670758	chr1	186668893	186670758	ENSMUSG00000073481.3	Mosc2	ENSMUST00000162501.1	protein_coding	-
chr1_186668893_186670758	chr1	186668893	186670758	ENSMUSG00000073481.3	Mosc2	ENSMUST00000161821.1	protein_coding	-
chr1_186668893_186670758	chr1	186668893	186670758	ENSMUSG00000073481.3	Mosc2	ENSMUST00000159293.1	nonsense_mediated_decay	-
chr1_186668893_186670758	chr1	186668893	186670758	ENSMUSG00000073481.3	Mosc2	ENSMUST00000068725.3	protein_coding	-
chr1_186682065_186683224	chr1	186682065	186683224	ENSMUSG00000088562.1	7SK	ENSMUST00000157937.1	misc_RNA	-
chr1_186704903_186707326	chr1	186704903	186707326	ENSMUSG00000039349.5	C130074G19Rik	ENSMUST00000048308.5	protein_coding	-
chr1_186822577_186824913	chr1	186822577	186824913	ENSMUSG00000026620.6	Mark1	ENSMUST00000027929.4	protein_coding	-
chr1_187026998_187028706	chr1	187026998	187028706	ENSMUSG00000039318.7	Rab3gap2	ENSMUST00000069652.6	protein_coding	+
chr1_187066201_187067607	chr1	187066201	187067607	ENSMUSG00000077571.1	Snora36b	ENSMUST00000104383.1	snoRNA	+
chr1_187152331_187153617	chr1	187152331	187153617	ENSMUSG00000026618.5	Iars2	ENSMUST00000153211.1	retained_intron	-
chr1_187152331_187153617	chr1	187152331	187153617	ENSMUSG00000026618.5	Iars2	ENSMUST00000110974.3	protein_coding	-
chr1_187152331_187153617	chr1	187152331	187153617	ENSMUSG00000026618.5	Iars2	ENSMUST00000110975.1	protein_coding	-
chr1_187152331_187153617	chr1	187152331	187153617	ENSMUSG00000026618.5	Iars2	ENSMUST00000027921.4	protein_coding	-
chr1_187155768_187156686	chr1	187155768	187156686	ENSMUSG00000026617.9	Bpnt1	ENSMUST00000027916.6	protein_coding	+
chr1_187155768_187156686	chr1	187155768	187156686	ENSMUSG00000026617.9	Bpnt1	ENSMUST00000151769.1	protein_coding	+
chr1_187155768_187156686	chr1	187155768	187156686	ENSMUSG00000026617.9	Bpnt1	ENSMUST00000110965.1	protein_coding	+
chr1_187155768_187156686	chr1	187155768	187156686	ENSMUSG00000026617.9	Bpnt1	ENSMUST00000137757.1	processed_transcript	+
chr1_187186371_187187840	chr1	187186371	187187840	ENSMUSG00000026615.8	Eprs	ENSMUST00000046514.7	protein_coding	+
chr1_187186371_187187840	chr1	187186371	187187840	ENSMUSG00000026615.8	Eprs	ENSMUST00000166423.1	protein_coding	+
chr1_187186371_187187840	chr1	187186371	187187840	ENSMUSG00000091047.1	4930532G15Rik	ENSMUST00000163485.1	lincRNA	-
chr1_187265459_187266203	chr1	187265459	187266203	ENSMUSG00000051295.7	9630028B13Rik	ENSMUST00000143787.1	antisense	-
chr1_187278135_187280794	chr1	187278135	187280794	ENSMUSG00000026614.6	Slc30a10	ENSMUST00000061093.6	protein_coding	+
chr1_187278135_187280794	chr1	187278135	187280794	ENSMUSG00000085692.1	Gm2061	ENSMUST00000133360.1	lincRNA	-
chr1_187940217_187941752	chr1	187940217	187941752	ENSMUSG00000039246.7	Lyplal1	ENSMUST00000045388.7	protein_coding	-
chr1_188528996_188530197	chr1	188528996	188530197	ENSMUSG00000039239.8	Tgfb2	ENSMUST00000085692.3	protein_coding	-
chr1_188528996_188530197	chr1	188528996	188530197	ENSMUSG00000039239.8	Tgfb2	ENSMUST00000045288.8	protein_coding	-
chr1_188572417_188573973	chr1	188572417	188573973	ENSMUSG00000090488.1	A430105J06Rik	ENSMUST00000170818.1	lincRNA	+
chr1_188572417_188573973	chr1	188572417	188573973	ENSMUSG00000001305.5	Rrp15	ENSMUST00000162336.1	retained_intron	-
chr1_188572417_188573973	chr1	188572417	188573973	ENSMUSG00000001305.5	Rrp15	ENSMUST00000001339.5	protein_coding	-
chr1_188791107_188791972	chr1	188791107	188791972	ENSMUSG00000039224.1	D1Pas1	ENSMUST00000045108.1	protein_coding	+
chr1_188948827_188950444	chr1	188948827	188950444	ENSMUSG00000089730.1	1700007P06Rik	ENSMUST00000160380.1	antisense	+
chr1_188966716_188967382	chr1	188966716	188967382	ENSMUSG00000026611.9	Spata17	ENSMUST00000161133.1	protein_coding	-
chr1_188966716_188967382	chr1	188966716	188967382	ENSMUSG00000026611.9	Spata17	ENSMUST00000159609.1	protein_coding	-
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000097443.3	protein_coding	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000160481.1	nonsense_mediated_decay	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000065573.7	protein_coding	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000110943.2	protein_coding	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000161260.1	retained_intron	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000044812.5	protein_coding	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000159748.1	nonsense_mediated_decay	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000160471.1	protein_coding	+
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000026611.9	Spata17	ENSMUST00000068313.6	protein_coding	-
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000026611.9	Spata17	ENSMUST00000110945.1	protein_coding	-
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000026611.9	Spata17	ENSMUST00000027908.6	protein_coding	-
chr1_189038830_189040103	chr1	189038830	189040103	ENSMUSG00000026611.9	Spata17	ENSMUST00000159848.1	protein_coding	-
chr1_189049722_189050862	chr1	189049722	189050862	ENSMUSG00000039210.10	Gpatch2	ENSMUST00000160570.1	protein_coding	+
chr1_189432116_189434170	chr1	189432116	189434170	ENSMUSG00000026610.7	Esrrg	ENSMUST00000127489.1	protein_coding	+
chr1_189432116_189434170	chr1	189432116	189434170	ENSMUSG00000026610.7	Esrrg	ENSMUST00000110939.1	protein_coding	+
chr1_189432116_189434170	chr1	189432116	189434170	ENSMUSG00000026610.7	Esrrg	ENSMUST00000152927.1	processed_transcript	+
chr1_189821200_189822427	chr1	189821200	189822427	ENSMUSG00000026610.7	Esrrg	ENSMUST00000027906.6	protein_coding	+
chr1_189821200_189822427	chr1	189821200	189822427	ENSMUSG00000026610.7	Esrrg	ENSMUST00000110938.1	protein_coding	+
chr1_190446466_190446813	chr1	190446466	190446813	ENSMUSG00000077235.1	SNORA17	ENSMUST00000104047.1	snoRNA	-
chr1_190830837_190832317	chr1	190830837	190832317	ENSMUSG00000026608.6	Kctd3	ENSMUST00000085678.2	protein_coding	-
chr1_191166378_191166978	chr1	191166378	191166978	ENSMUSG00000037624.8	Kcnk2	ENSMUST00000079451.5	protein_coding	-
chr1_191167127_191168577	chr1	191167127	191168577	ENSMUSG00000037624.8	Kcnk2	ENSMUST00000079451.5	protein_coding	-
chr1_191167127_191168577	chr1	191167127	191168577	ENSMUSG00000037624.8	Kcnk2	ENSMUST00000110920.1	protein_coding	-
chr1_191472750_191472961	chr1	191472750	191472961	ENSMUSG00000026605.7	Cenpf	ENSMUST00000165798.1	protein_coding	-
chr1_191511608_191512556	chr1	191511608	191512556	ENSMUSG00000026605.7	Cenpf	ENSMUST00000165663.1	nonsense_mediated_decay	-
chr1_191511608_191512556	chr1	191511608	191512556	ENSMUSG00000026605.7	Cenpf	ENSMUST00000165962.1	protein_coding	-
chr1_191511608_191512556	chr1	191511608	191512556	ENSMUSG00000026605.7	Cenpf	ENSMUST00000027900.5	protein_coding	-
chr1_191511608_191512556	chr1	191511608	191512556	ENSMUSG00000026605.7	Cenpf	ENSMUST00000171929.1	protein_coding	-
chr1_191551084_191552982	chr1	191551084	191552982	ENSMUSG00000026604.10	Ptpn14	ENSMUST00000097442.2	protein_coding	+
chr1_191610119_191611828	chr1	191610119	191611828	ENSMUSG00000026604.10	Ptpn14	ENSMUST00000027898.5	protein_coding	+
chr1_191610119_191611828	chr1	191610119	191611828	ENSMUSG00000026604.10	Ptpn14	ENSMUST00000128275.1	retained_intron	+
chr1_191610119_191611828	chr1	191610119	191611828	ENSMUSG00000026604.10	Ptpn14	ENSMUST00000027899.6	protein_coding	+
chr1_191745089_191747139	chr1	191745089	191747139	ENSMUSG00000026603.7	Smyd2	ENSMUST00000144452.1	retained_intron	-
chr1_191745089_191747139	chr1	191745089	191747139	ENSMUSG00000026603.7	Smyd2	ENSMUST00000027897.7	protein_coding	-
chr1_191993748_191994743	chr1	191993748	191994743	ENSMUSG00000079045.2	Gm17566	ENSMUST00000110279.2	lincRNA	+
chr1_191993748_191994743	chr1	191993748	191994743	ENSMUSG00000010175.6	Prox1	ENSMUST00000010319.6	protein_coding	-
chr1_192658103_192658976	chr1	192658103	192658976	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000160889.1	nonsense_mediated_decay	-
chr1_192668355_192668564	chr1	192668355	192668564	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000159823.1	retained_intron	-
chr1_192722835_192723427	chr1	192722835	192723427	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000162692.1	processed_transcript	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000159066.1	protein_coding	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000097440.3	protein_coding	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000162500.1	retained_intron	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000159367.1	nonsense_mediated_decay	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000061611.8	protein_coding	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000166488.1	protein_coding	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000056178.8	protein_coding	-
chr1_192734604_192736398	chr1	192734604	192736398	ENSMUSG00000089872.3	Rps6kc1	ENSMUST00000159624.1	nonsense_mediated_decay	-
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000171241.1	protein_coding	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000168455.1	protein_coding	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000137608.1	retained_intron	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000066632.7	protein_coding	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000123384.1	nonsense_mediated_decay	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000110899.1	protein_coding	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000135364.1	protein_coding	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000144693.1	retained_intron	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000130298.1	processed_transcript	+
chr1_192751680_192753630	chr1	192751680	192753630	ENSMUSG00000026634.9	Angel2	ENSMUST00000134187.1	retained_intron	+
chr1_192802131_192803691	chr1	192802131	192803691	ENSMUSG00000037568.6	Vash2	ENSMUST00000166139.1	protein_coding	-
chr1_192802131_192803691	chr1	192802131	192803691	ENSMUSG00000037568.6	Vash2	ENSMUST00000047409.6	protein_coding	-
chr1_192848752_192850899	chr1	192848752	192850899	ENSMUSG00000066595.4	Mfsd7b	ENSMUST00000085635.4	protein_coding	-
chr1_192860499_192860748	chr1	192860499	192860748	ENSMUSG00000057072.5	1700022P22Rik	ENSMUST00000077889.5	protein_coding	+
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000062510.6	Nsl1	ENSMUST00000076952.5	protein_coding	+
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000062510.6	Nsl1	ENSMUST00000139340.1	protein_coding	+
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000062510.6	Nsl1	ENSMUST00000078259.6	protein_coding	+
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000156527.1	processed_transcript	-
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000143876.1	processed_transcript	-
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000116475.2	protein_coding	-
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000110891.1	protein_coding	-
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000027945.5	protein_coding	-
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000085633.5	protein_coding	-
chr1_192886092_192887453	chr1	192886092	192887453	ENSMUSG00000026632.10	Tatdn3	ENSMUST00000110893.3	protein_coding	-
chr1_192922123_192922785	chr1	192922123	192922785	ENSMUSG00000026630.4	Batf3	ENSMUST00000027943.4	protein_coding	+
chr1_193006218_193009154	chr1	193006218	193009154	ENSMUSG00000026628.8	Atf3	ENSMUST00000131854.1	processed_transcript	-
chr1_193006218_193009154	chr1	193006218	193009154	ENSMUSG00000026628.8	Atf3	ENSMUST00000027941.8	protein_coding	-
chr1_193047695_193049882	chr1	193047695	193049882	ENSMUSG00000073478.5	D730003I15Rik	ENSMUST00000139056.1	processed_transcript	+
chr1_193141123_193142338	chr1	193141123	193142338	ENSMUSG00000037499.9	Nenf	ENSMUST00000046770.9	protein_coding	-
chr1_193148969_193150865	chr1	193148969	193150865	ENSMUSG00000026627.6	Tmem206	ENSMUST00000027940.5	protein_coding	+
chr1_193148969_193150865	chr1	193148969	193150865	ENSMUSG00000026627.6	Tmem206	ENSMUST00000164200.1	protein_coding	+
chr1_193219595_193221923	chr1	193219595	193221923	ENSMUSG00000026626.5	Ppp2r5a	ENSMUST00000110885.1	protein_coding	-
chr1_193219595_193221923	chr1	193219595	193221923	ENSMUSG00000026626.5	Ppp2r5a	ENSMUST00000067976.3	protein_coding	-
chr1_193363726_193364111	chr1	193363726	193364111	ENSMUSG00000037474.7	Dtl	ENSMUST00000169167.1	protein_coding	-
chr1_193398725_193400386	chr1	193398725	193400386	ENSMUSG00000037461.5	Ints7	ENSMUST00000045450.5	protein_coding	+
chr1_193398725_193400386	chr1	193398725	193400386	ENSMUSG00000037474.7	Dtl	ENSMUST00000046398.6	protein_coding	-
chr1_193398725_193400386	chr1	193398725	193400386	ENSMUSG00000037474.7	Dtl	ENSMUST00000027933.5	protein_coding	-
chr1_193541021_193543635	chr1	193541021	193543635	ENSMUSG00000026623.10	Lpgat1	ENSMUST00000110855.1	protein_coding	+
chr1_193541021_193543635	chr1	193541021	193543635	ENSMUSG00000026623.10	Lpgat1	ENSMUST00000133076.1	protein_coding	+
chr1_193541021_193543635	chr1	193541021	193543635	ENSMUSG00000026623.10	Lpgat1	ENSMUST00000138494.1	retained_intron	+
chr1_193541021_193543635	chr1	193541021	193543635	ENSMUSG00000026623.10	Lpgat1	ENSMUST00000110856.1	protein_coding	+
chr1_193541021_193543635	chr1	193541021	193543635	ENSMUSG00000026623.10	Lpgat1	ENSMUST00000130876.1	protein_coding	+
chr1_193644734_193646687	chr1	193644734	193646687	ENSMUSG00000026622.8	Nek2	ENSMUST00000027931.7	protein_coding	+
chr1_193644734_193646687	chr1	193644734	193646687	ENSMUSG00000026622.8	Nek2	ENSMUST00000126446.1	retained_intron	+
chr1_193644734_193646687	chr1	193644734	193646687	ENSMUSG00000026622.8	Nek2	ENSMUST00000171468.1	protein_coding	+
chr1_193644734_193646687	chr1	193644734	193646687	ENSMUSG00000026622.8	Nek2	ENSMUST00000150839.1	retained_intron	+
chr1_193723065_193724194	chr1	193723065	193724194	ENSMUSG00000055833.8	1700034H15Rik	ENSMUST00000154116.1	retained_intron	-
chr1_193723065_193724194	chr1	193723065	193724194	ENSMUSG00000055833.8	1700034H15Rik	ENSMUST00000140401.1	processed_transcript	-
chr1_193729770_193731850	chr1	193729770	193731850	ENSMUSG00000037434.7	Slc30a1	ENSMUST00000044954.6	protein_coding	+
chr1_193729770_193731850	chr1	193729770	193731850	ENSMUSG00000037434.7	Slc30a1	ENSMUST00000161756.1	protein_coding	+
chr1_193729770_193731850	chr1	193729770	193731850	ENSMUSG00000055833.8	1700034H15Rik	ENSMUST00000069573.5	protein_coding	-
chr1_193729770_193731850	chr1	193729770	193731850	ENSMUSG00000055833.8	1700034H15Rik	ENSMUST00000139827.1	nonsense_mediated_decay	-
chr1_193801053_193801537	chr1	193801053	193801537	ENSMUSG00000049353.8	Rd3	ENSMUST00000053463.6	protein_coding	+
chr1_193915197_193917183	chr1	193915197	193917183	ENSMUSG00000085764.1	Gm16621	ENSMUST00000130280.1	lincRNA	+
chr1_193915197_193917183	chr1	193915197	193917183	ENSMUSG00000026637.7	Traf5	ENSMUST00000085573.5	protein_coding	-
chr1_193960047_193962973	chr1	193960047	193962973	ENSMUSG00000073476.2	Gm10516	ENSMUST00000097436.2	lincRNA	+
chr1_193960047_193962973	chr1	193960047	193962973	ENSMUSG00000037395.8	Rcor3	ENSMUST00000073279.6	protein_coding	-
chr1_193960047_193962973	chr1	193960047	193962973	ENSMUSG00000037395.8	Rcor3	ENSMUST00000110849.2	protein_coding	-
chr1_194014201_194016150	chr1	194014201	194016150	ENSMUSG00000058248.6	Kcnh1	ENSMUST00000078470.5	protein_coding	+
chr1_194014201_194016150	chr1	194014201	194016150	ENSMUSG00000058248.6	Kcnh1	ENSMUST00000110844.1	protein_coding	+
chr1_194563323_194563537	chr1	194563323	194563537	ENSMUSG00000037375.9	Hhat	ENSMUST00000154203.1	protein_coding	-
chr1_194571162_194572572	chr1	194571162	194572572	ENSMUSG00000064881.1	U5	ENSMUST00000082947.1	snRNA	+
chr1_194595938_194597945	chr1	194595938	194597945	ENSMUSG00000037375.9	Hhat	ENSMUST00000085565.3	protein_coding	-
chr1_194595938_194597945	chr1	194595938	194597945	ENSMUSG00000037375.9	Hhat	ENSMUST00000128619.1	protein_coding	-
chr1_194595938_194597945	chr1	194595938	194597945	ENSMUSG00000037375.9	Hhat	ENSMUST00000044190.5	protein_coding	-
chr1_194660353_194662069	chr1	194660353	194662069	ENSMUSG00000047384.2	A730013G03Rik	ENSMUST00000057543.2	protein_coding	-
chr1_194677753_194678421	chr1	194677753	194678421	ENSMUSG00000016262.7	Sertad4	ENSMUST00000155503.1	processed_transcript	-
chr1_194680449_194681551	chr1	194680449	194681551	ENSMUSG00000089812.1	Gm15867	ENSMUST00000159407.1	antisense	+
chr1_194680449_194681551	chr1	194680449	194681551	ENSMUSG00000016262.7	Sertad4	ENSMUST00000125391.1	processed_transcript	-
chr1_194681584_194682987	chr1	194681584	194682987	ENSMUSG00000016262.7	Sertad4	ENSMUST00000125391.1	processed_transcript	-
chr1_194681584_194682987	chr1	194681584	194682987	ENSMUSG00000016262.7	Sertad4	ENSMUST00000016406.6	protein_coding	-
chr1_194681584_194682987	chr1	194681584	194682987	ENSMUSG00000016262.7	Sertad4	ENSMUST00000155579.1	protein_coding	-
chr1_194860722_194862879	chr1	194860722	194862879	ENSMUSG00000016200.7	Syt14	ENSMUST00000016344.7	protein_coding	-
chr1_194860722_194862879	chr1	194860722	194862879	ENSMUSG00000016200.7	Syt14	ENSMUST00000164191.1	protein_coding	-
chr1_194955782_194958079	chr1	194955782	194958079	ENSMUSG00000016181.4	Diexf	ENSMUST00000085555.1	protein_coding	-
chr1_194978892_194980365	chr1	194978892	194980365	ENSMUSG00000026638.8	Irf6	ENSMUST00000076521.5	protein_coding	+
chr1_194978892_194980365	chr1	194978892	194980365	ENSMUSG00000026638.8	Irf6	ENSMUST00000138826.1	retained_intron	+
chr1_194981873_194983131	chr1	194981873	194983131	ENSMUSG00000026638.8	Irf6	ENSMUST00000140066.1	retained_intron	+
chr1_194983317_194983773	chr1	194983317	194983773	ENSMUSG00000026638.8	Irf6	ENSMUST00000085552.4	protein_coding	+
chr1_194998917_195000305	chr1	194998917	195000305	ENSMUSG00000079144.5	A130010J15Rik	ENSMUST00000161235.1	protein_coding	+
chr1_194998917_195000305	chr1	194998917	195000305	ENSMUSG00000079144.5	A130010J15Rik	ENSMUST00000160077.1	processed_transcript	+
chr1_194998917_195000305	chr1	194998917	195000305	ENSMUSG00000079144.5	A130010J15Rik	ENSMUST00000110831.2	protein_coding	+
chr1_194998917_195000305	chr1	194998917	195000305	ENSMUSG00000079144.5	A130010J15Rik	ENSMUST00000069054.8	protein_coding	+
chr1_195026652_195028283	chr1	195026652	195028283	ENSMUSG00000037318.4	Traf3ip3	ENSMUST00000162905.1	processed_transcript	-
chr1_195026652_195028283	chr1	195026652	195028283	ENSMUSG00000037318.4	Traf3ip3	ENSMUST00000161151.1	processed_transcript	-
chr1_195026652_195028283	chr1	195026652	195028283	ENSMUSG00000037318.4	Traf3ip3	ENSMUST00000161145.1	processed_transcript	-
chr1_195026652_195028283	chr1	195026652	195028283	ENSMUSG00000037318.4	Traf3ip3	ENSMUST00000159805.1	retained_intron	-
chr1_195026652_195028283	chr1	195026652	195028283	ENSMUSG00000037318.4	Traf3ip3	ENSMUST00000161403.1	retained_intron	-
chr1_195026652_195028283	chr1	195026652	195028283	ENSMUSG00000037318.4	Traf3ip3	ENSMUST00000043550.4	protein_coding	-
chr1_195033308_195034911	chr1	195033308	195034911	ENSMUSG00000089688.1	1600010F14Rik	ENSMUST00000162977.1	antisense	+
chr1_195066387_195066593	chr1	195066387	195066593	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000161406.1	protein_coding	-
chr1_195067443_195069643	chr1	195067443	195069643	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000162842.1	protein_coding	-
chr1_195067443_195069643	chr1	195067443	195069643	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000160929.1	protein_coding	-
chr1_195067443_195069643	chr1	195067443	195069643	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000159644.1	protein_coding	-
chr1_195067443_195069643	chr1	195067443	195069643	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000016338.8	protein_coding	-
chr1_195069765_195070326	chr1	195069765	195070326	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000159644.1	protein_coding	-
chr1_195089151_195091055	chr1	195089151	195091055	ENSMUSG00000016194.8	Hsd11b1	ENSMUST00000161737.1	protein_coding	-
chr1_195098257_195100118	chr1	195098257	195100118	ENSMUSG00000009633.2	G0s2	ENSMUST00000009777.2	protein_coding	-
chr1_195127416_195128641	chr1	195127416	195128641	ENSMUSG00000026639.11	Lamb3	ENSMUST00000016315.9	protein_coding	+
chr1_195127416_195128641	chr1	195127416	195128641	ENSMUSG00000026639.11	Lamb3	ENSMUST00000162180.1	processed_transcript	+
chr1_195127416_195128641	chr1	195127416	195128641	ENSMUSG00000026639.11	Lamb3	ENSMUST00000159955.1	protein_coding	+
chr1_195129569_195130113	chr1	195129569	195130113	ENSMUSG00000026639.11	Lamb3	ENSMUST00000085541.6	protein_coding	+
chr1_195146655_195146953	chr1	195146655	195146953	ENSMUSG00000026639.11	Lamb3	ENSMUST00000161526.1	processed_transcript	+
chr1_195185394_195185798	chr1	195185394	195185798	ENSMUSG00000016179.5	Camk1g	ENSMUST00000163202.1	protein_coding	-
chr1_195188250_195189035	chr1	195188250	195189035	ENSMUSG00000016179.5	Camk1g	ENSMUST00000167700.1	processed_transcript	-
chr1_195194132_195197034	chr1	195194132	195197034	ENSMUSG00000016179.5	Camk1g	ENSMUST00000165718.1	nonsense_mediated_decay	-
chr1_195194132_195197034	chr1	195194132	195197034	ENSMUSG00000016179.5	Camk1g	ENSMUST00000169907.1	protein_coding	-
chr1_195194132_195197034	chr1	195194132	195197034	ENSMUSG00000016179.5	Camk1g	ENSMUST00000016323.4	protein_coding	-
chr1_196444958_196447236	chr1	196444958	196447236	ENSMUSG00000026640.6	Plxna2	ENSMUST00000027952.5	protein_coding	+
chr1_196647708_196648052	chr1	196647708	196648052	ENSMUSG00000092633.1	AC162447.1	ENSMUST00000174892.1	miRNA	+
chr1_196648102_196648586	chr1	196648102	196648586	ENSMUSG00000092633.1	AC162447.1	ENSMUST00000174892.1	miRNA	+
chr1_196764614_196766049	chr1	196764614	196766049	ENSMUSG00000016494.3	Cd34	ENSMUST00000016638.2	protein_coding	+
chr1_196764614_196766049	chr1	196764614	196766049	ENSMUSG00000016494.3	Cd34	ENSMUST00000110815.2	protein_coding	+
chr1_196802133_196804606	chr1	196802133	196804606	ENSMUSG00000073474.4	A330023F24Rik	ENSMUST00000097434.4	lincRNA	+
chr1_196802133_196804606	chr1	196802133	196804606	ENSMUSG00000073474.4	A330023F24Rik	ENSMUST00000172133.1	lincRNA	+
chr1_196802133_196804606	chr1	196802133	196804606	ENSMUSG00000086469.1	Gm16897	ENSMUST00000133646.1	lincRNA	-
chr1_196842768_196844788	chr1	196842768	196844788	ENSMUSG00000073474.4	A330023F24Rik	ENSMUST00000165871.1	lincRNA	+
chr1_196917628_196919317	chr1	196917628	196919317	ENSMUSG00000016493.6	Cd46	ENSMUST00000110814.1	protein_coding	-
chr1_196917628_196919317	chr1	196917628	196919317	ENSMUSG00000016493.6	Cd46	ENSMUST00000159563.1	nonsense_mediated_decay	-
chr1_196917628_196919317	chr1	196917628	196919317	ENSMUSG00000016493.6	Cd46	ENSMUST00000016637.6	protein_coding	-
chr1_196917628_196919317	chr1	196917628	196919317	ENSMUSG00000016493.6	Cd46	ENSMUST00000162614.1	protein_coding	-
chr1_196917628_196919317	chr1	196917628	196919317	ENSMUSG00000016493.6	Cd46	ENSMUST00000160817.1	protein_coding	-
chr1_196917628_196919317	chr1	196917628	196919317	ENSMUSG00000016493.6	Cd46	ENSMUST00000162650.1	protein_coding	-
chr1_196956755_196958604	chr1	196956755	196958604	ENSMUSG00000016481.9	Cr1l	ENSMUST00000075451.6	protein_coding	-
chr1_196956755_196958604	chr1	196956755	196958604	ENSMUSG00000016481.9	Cr1l	ENSMUST00000027918.8	protein_coding	-
chr1_197002078_197003316	chr1	197002078	197003316	ENSMUSG00000026616.8	Cr2	ENSMUST00000043104.7	protein_coding	-
chr1_197002078_197003316	chr1	197002078	197003316	ENSMUSG00000026616.8	Cr2	ENSMUST00000082321.3	protein_coding	-
chr10_3133200_3135650	chr10	3133200	3135650	ENSMUSG00000015202.7	Cnksr3	ENSMUST00000015346.5	protein_coding	+
chr10_3293422_3294257	chr10	3293422	3294257	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000086896.3	protein_coding	+
chr10_3365885_3367889	chr10	3365885	3367889	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000149708.1	processed_transcript	+
chr10_3365885_3367889	chr10	3365885	3367889	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000144622.1	processed_transcript	+
chr10_3365885_3367889	chr10	3365885	3367889	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000165510.1	protein_coding	+
chr10_3365885_3367889	chr10	3365885	3367889	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000105617.1	protein_coding	+
chr10_3365885_3367889	chr10	3365885	3367889	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000154998.1	processed_transcript	+
chr10_3365885_3367889	chr10	3365885	3367889	ENSMUSG00000064065.8	Ipcef1	ENSMUST00000078070.3	protein_coding	+
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000133486.1	processed_transcript	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000105602.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000105603.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000078634.5	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000000783.6	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000092731.4	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000105604.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000092729.4	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000154906.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000105605.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000148625.1	processed_transcript	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000152674.1	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000092728.4	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000135502.1	processed_transcript	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000123861.1	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000105601.2	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000129954.1	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000154941.1	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000052751.7	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000100088.3	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000129221.1	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000141897.1	processed_transcript	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000144264.1	nonsense_mediated_decay	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000169460.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000105611.1	protein_coding	-
chr10_3557191_3558177	chr10	3557191	3558177	ENSMUSG00000000766.11	Oprm1	ENSMUST00000165719.1	protein_coding	-
chr10_3584789_3585686	chr10	3584789	3585686	ENSMUSG00000078488.1	Gm10945	ENSMUST00000105596.1	protein_coding	+
chr10_4423504_4425942	chr10	4423504	4425942	ENSMUSG00000019775.10	Rgs17	ENSMUST00000064225.7	protein_coding	+
chr10_4423504_4425942	chr10	4423504	4425942	ENSMUSG00000019775.10	Rgs17	ENSMUST00000131996.1	protein_coding	+
chr10_4423504_4425942	chr10	4423504	4425942	ENSMUSG00000019775.10	Rgs17	ENSMUST00000117676.1	protein_coding	+
chr10_4423504_4425942	chr10	4423504	4425942	ENSMUSG00000019775.10	Rgs17	ENSMUST00000019909.6	protein_coding	+
chr10_4521269_4523307	chr10	4521269	4523307	ENSMUSG00000019774.8	Mtrf1l	ENSMUST00000019908.8	protein_coding	+
chr10_4521269_4523307	chr10	4521269	4523307	ENSMUSG00000019774.8	Mtrf1l	ENSMUST00000145687.1	processed_transcript	+
chr10_4539752_4541878	chr10	4539752	4541878	ENSMUSG00000019773.7	Fbxo5	ENSMUST00000019907.7	protein_coding	+
chr10_4539752_4541878	chr10	4539752	4541878	ENSMUSG00000019773.7	Fbxo5	ENSMUST00000142200.1	processed_transcript	+
chr10_4752653_4753068	chr10	4752653	4753068	ENSMUSG00000046916.8	Myct1	ENSMUST00000051809.8	protein_coding	-
chr10_4795327_4796836	chr10	4795327	4796836	ENSMUSG00000019769.9	Syne1	ENSMUST00000041639.5	protein_coding	+
chr10_4989567_4989988	chr10	4989567	4989988	ENSMUSG00000077596.1	U6	ENSMUST00000104408.1	snRNA	-
chr10_5151064_5152438	chr10	5151064	5152438	ENSMUSG00000019769.9	Syne1	ENSMUST00000092721.5	protein_coding	+
chr10_5276899_5278196	chr10	5276899	5278196	ENSMUSG00000019769.9	Syne1	ENSMUST00000095899.3	protein_coding	+
chr10_5276899_5278196	chr10	5276899	5278196	ENSMUSG00000061261.2	Gm10097	ENSMUST00000073478.2	protein_coding	-
chr10_5569938_5571295	chr10	5569938	5571295	ENSMUSG00000084430.1	SNORD88	ENSMUST00000122481.1	snoRNA	+
chr10_5633609_5634990	chr10	5633609	5634990	ENSMUSG00000019768.9	Esr1	ENSMUST00000127145.1	processed_transcript	-
chr10_5635914_5636911	chr10	5635914	5636911	ENSMUSG00000019768.9	Esr1	ENSMUST00000105588.1	protein_coding	-
chr10_5635914_5636911	chr10	5635914	5636911	ENSMUSG00000019768.9	Esr1	ENSMUST00000105589.1	protein_coding	-
chr10_5733387_5735292	chr10	5733387	5735292	ENSMUSG00000019768.9	Esr1	ENSMUST00000133985.1	retained_intron	-
chr10_5733387_5735292	chr10	5733387	5735292	ENSMUSG00000019768.9	Esr1	ENSMUST00000138828.1	retained_intron	-
chr10_5733387_5735292	chr10	5733387	5735292	ENSMUSG00000019768.9	Esr1	ENSMUST00000105587.2	protein_coding	-
chr10_5733387_5735292	chr10	5733387	5735292	ENSMUSG00000019768.9	Esr1	ENSMUST00000149195.1	nonsense_mediated_decay	-
chr10_5733387_5735292	chr10	5733387	5735292	ENSMUSG00000019768.9	Esr1	ENSMUST00000067086.7	protein_coding	-
chr10_5733387_5735292	chr10	5733387	5735292	ENSMUSG00000019768.9	Esr1	ENSMUST00000105590.1	protein_coding	-
chr10_5833230_5834329	chr10	5833230	5834329	ENSMUSG00000019767.5	Gm221	ENSMUST00000019901.4	protein_coding	-
chr10_5863909_5865009	chr10	5863909	5865009	ENSMUSG00000019767.5	Gm221	ENSMUST00000138112.1	protein_coding	-
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000019763.5	Rmnd1	ENSMUST00000042251.4	protein_coding	+
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000019763.5	Rmnd1	ENSMUST00000156940.1	retained_intron	+
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000019763.5	Rmnd1	ENSMUST00000126102.1	protein_coding	+
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000019763.5	Rmnd1	ENSMUST00000131853.1	protein_coding	+
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000019763.5	Rmnd1	ENSMUST00000148566.1	retained_intron	+
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000019763.5	Rmnd1	ENSMUST00000155172.1	protein_coding	+
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000061759.9	1700052N19Rik	ENSMUST00000134484.1	retained_intron	-
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000061759.9	1700052N19Rik	ENSMUST00000117489.1	protein_coding	-
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000061759.9	1700052N19Rik	ENSMUST00000143037.1	processed_transcript	-
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000061759.9	1700052N19Rik	ENSMUST00000152294.1	nonsense_mediated_decay	-
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000061759.9	1700052N19Rik	ENSMUST00000118544.1	protein_coding	-
chr10_5913197_5915619	chr10	5913197	5915619	ENSMUSG00000061759.9	1700052N19Rik	ENSMUST00000095893.4	protein_coding	-
chr10_5937045_5937513	chr10	5937045	5937513	ENSMUSG00000085687.1	Gm16153	ENSMUST00000132184.1	processed_transcript	-
chr10_5957724_5958648	chr10	5957724	5958648	ENSMUSG00000075327.3	Zbtb2	ENSMUST00000100078.2	protein_coding	+
chr10_5958949_5960238	chr10	5958949	5960238	ENSMUSG00000075327.3	Zbtb2	ENSMUST00000100077.3	protein_coding	+
chr10_6079034_6081016	chr10	6079034	6081016	ENSMUSG00000038587.7	Akap12	ENSMUST00000045730.5	protein_coding	-
chr10_6079034_6081016	chr10	6079034	6081016	ENSMUSG00000038587.7	Akap12	ENSMUST00000092717.4	protein_coding	-
chr10_6372309_6373819	chr10	6372309	6373819	ENSMUSG00000040675.11	Mthfd1l	ENSMUST00000117291.1	protein_coding	-
chr10_6372309_6373819	chr10	6372309	6373819	ENSMUSG00000040675.11	Mthfd1l	ENSMUST00000043735.7	protein_coding	-
chr10_6372309_6373819	chr10	6372309	6373819	ENSMUSG00000040675.11	Mthfd1l	ENSMUST00000120585.1	protein_coding	-
chr10_6411024_6411763	chr10	6411024	6411763	ENSMUSG00000089392.1	5S_rRNA	ENSMUST00000158767.1	rRNA	+
chr10_6604716_6606425	chr10	6604716	6606425	ENSMUSG00000040624.11	Plekhg1	ENSMUST00000137111.1	retained_intron	-
chr10_6604716_6606425	chr10	6604716	6606425	ENSMUSG00000040624.11	Plekhg1	ENSMUST00000144543.1	retained_intron	-
chr10_6604716_6606425	chr10	6604716	6606425	ENSMUSG00000040624.11	Plekhg1	ENSMUST00000120274.1	protein_coding	-
chr10_6805253_6806708	chr10	6805253	6806708	ENSMUSG00000019762.4	Iyd	ENSMUST00000141745.1	retained_intron	-
chr10_6805253_6806708	chr10	6805253	6806708	ENSMUSG00000019762.4	Iyd	ENSMUST00000019896.4	protein_coding	-
chr10_6978707_6980897	chr10	6978707	6980897	ENSMUSG00000086086.1	Gm16760	ENSMUST00000149072.1	lincRNA	+
chr10_6978707_6980897	chr10	6978707	6980897	ENSMUSG00000040653.5	Ppp1r14c	ENSMUST00000043374.5	protein_coding	-
chr10_7078637_7078837	chr10	7078637	7078837	ENSMUSG00000091618.1	H60c	ENSMUST00000170893.1	protein_coding	+
chr10_7309013_7310758	chr10	7309013	7310758	ENSMUSG00000019796.5	Lrp11	ENSMUST00000134346.1	protein_coding	+
chr10_7309013_7310758	chr10	7309013	7310758	ENSMUSG00000019796.5	Lrp11	ENSMUST00000019931.5	protein_coding	+
chr10_7309013_7310758	chr10	7309013	7310758	ENSMUSG00000019796.5	Lrp11	ENSMUST00000130590.1	protein_coding	+
chr10_7309013_7310758	chr10	7309013	7310758	ENSMUSG00000019796.5	Lrp11	ENSMUST00000135907.1	protein_coding	+
chr10_7309013_7310758	chr10	7309013	7310758	ENSMUSG00000019796.5	Lrp11	ENSMUST00000123722.1	protein_coding	+
chr10_7328378_7329010	chr10	7328378	7329010	ENSMUSG00000086647.1	Gm16255	ENSMUST00000140968.1	processed_transcript	-
chr10_7368791_7369555	chr10	7368791	7369555	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000161428.1	protein_coding	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000160517.1	retained_intron	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000160250.1	retained_intron	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000163085.1	protein_coding	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000019930.7	protein_coding	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000159917.1	protein_coding	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000161123.1	nonsense_mediated_decay	-
chr10_7382242_7384289	chr10	7382242	7384289	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000162606.1	protein_coding	-
chr10_7386937_7387677	chr10	7386937	7387677	ENSMUSG00000040034.9	Nup43	ENSMUST00000040135.8	protein_coding	+
chr10_7386937_7387677	chr10	7386937	7387677	ENSMUSG00000040034.9	Nup43	ENSMUST00000162346.1	retained_intron	+
chr10_7386937_7387677	chr10	7386937	7387677	ENSMUSG00000040034.9	Nup43	ENSMUST00000162527.1	retained_intron	+
chr10_7400059_7401858	chr10	7400059	7401858	ENSMUSG00000040021.6	Lats1	ENSMUST00000165952.1	protein_coding	+
chr10_7400059_7401858	chr10	7400059	7401858	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000159977.1	protein_coding	-
chr10_7400059_7401858	chr10	7400059	7401858	ENSMUSG00000019795.10	Pcmt1	ENSMUST00000162682.1	protein_coding	-
chr10_7445274_7446647	chr10	7445274	7446647	ENSMUSG00000019794.7	Katna1	ENSMUST00000019929.6	protein_coding	+
chr10_7445274_7446647	chr10	7445274	7446647	ENSMUSG00000019794.7	Katna1	ENSMUST00000165806.1	protein_coding	+
chr10_7445274_7446647	chr10	7445274	7446647	ENSMUSG00000019794.7	Katna1	ENSMUST00000173400.1	nonsense_mediated_decay	+
chr10_7499687_7501477	chr10	7499687	7501477	ENSMUSG00000085211.1	B430219N15Rik	ENSMUST00000147230.1	antisense	+
chr10_7499687_7501477	chr10	7499687	7501477	ENSMUSG00000040006.7	BC013529	ENSMUST00000124838.1	protein_coding	-
chr10_7499687_7501477	chr10	7499687	7501477	ENSMUSG00000040006.7	BC013529	ENSMUST00000039763.7	protein_coding	-
chr10_7511912_7513541	chr10	7511912	7513541	ENSMUSG00000015757.4	Ppil4	ENSMUST00000015901.4	protein_coding	+
chr10_7511912_7513541	chr10	7511912	7513541	ENSMUSG00000015757.4	Ppil4	ENSMUST00000138151.1	retained_intron	+
chr10_7511912_7513541	chr10	7511912	7513541	ENSMUSG00000015757.4	Ppil4	ENSMUST00000143214.1	nonsense_mediated_decay	+
chr10_7511912_7513541	chr10	7511912	7513541	ENSMUSG00000052979.1	6530403G13Rik	ENSMUST00000065124.1	protein_coding	-
chr10_7511912_7513541	chr10	7511912	7513541	ENSMUSG00000040006.7	BC013529	ENSMUST00000124447.1	processed_transcript	-
chr10_7551605_7552830	chr10	7551605	7552830	ENSMUSG00000039981.4	Zc3h12d	ENSMUST00000039484.4	protein_coding	+
chr10_7551605_7552830	chr10	7551605	7552830	ENSMUSG00000039981.4	Zc3h12d	ENSMUST00000163689.1	protein_coding	+
chr10_7631009_7631663	chr10	7631009	7631663	ENSMUSG00000015755.10	Tab2	ENSMUST00000142007.1	retained_intron	-
chr10_7674446_7676839	chr10	7674446	7676839	ENSMUSG00000015755.10	Tab2	ENSMUST00000147938.1	protein_coding	-
chr10_7674446_7676839	chr10	7674446	7676839	ENSMUSG00000015755.10	Tab2	ENSMUST00000146444.1	protein_coding	-
chr10_8236713_8239540	chr10	8236713	8239540	ENSMUSG00000047712.7	Ust	ENSMUST00000061601.7	protein_coding	-
chr10_8362026_8362604	chr10	8362026	8362604	ENSMUSG00000077582.1	U6	ENSMUST00000104394.1	snRNA	+
chr10_8497208_8498219	chr10	8497208	8498219	ENSMUSG00000093360.1	AC091522.1	ENSMUST00000175619.1	miRNA	+
chr10_8604877_8606654	chr10	8604877	8606654	ENSMUSG00000015305.5	Sash1	ENSMUST00000015449.5	protein_coding	-
chr10_9394218_9395746	chr10	9394218	9395746	ENSMUSG00000060487.5	Samd5	ENSMUST00000100070.2	protein_coding	-
chr10_9517717_9518461	chr10	9517717	9518461	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000139779.1	retained_intron	-
chr10_9517717_9518461	chr10	9517717	9518461	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000136324.1	protein_coding	-
chr10_9517717_9518461	chr10	9517717	9518461	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000151435.1	processed_transcript	-
chr10_9572005_9572744	chr10	9572005	9572744	ENSMUSG00000064609.1	SNORA36	ENSMUST00000082675.1	snoRNA	-
chr10_9619611_9622314	chr10	9619611	9622314	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000125200.1	protein_coding	-
chr10_9619611_9622314	chr10	9619611	9622314	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000141722.1	protein_coding	-
chr10_9619611_9622314	chr10	9619611	9622314	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000038213.7	protein_coding	-
chr10_9619611_9622314	chr10	9619611	9622314	ENSMUSG00000019790.9	Stxbp5	ENSMUST00000105570.2	protein_coding	-
chr10_10149425_10149815	chr10	10149425	10149815	ENSMUSG00000050994.12	9130014G24Rik	ENSMUST00000045328.7	protein_coding	-
chr10_10191884_10192598	chr10	10191884	10192598	ENSMUSG00000050994.12	9130014G24Rik	ENSMUST00000132573.1	protein_coding	-
chr10_10191884_10192598	chr10	10191884	10192598	ENSMUSG00000050994.12	9130014G24Rik	ENSMUST00000172530.1	protein_coding	-
chr10_10276566_10278436	chr10	10276566	10278436	ENSMUSG00000019832.3	Rab32	ENSMUST00000019974.3	protein_coding	-
chr10_10383056_10383318	chr10	10383056	10383318	ENSMUSG00000087884.1	SNORA17	ENSMUST00000157259.1	snoRNA	+
chr10_10438464_10438906	chr10	10438464	10438906	ENSMUSG00000019828.7	Grm1	ENSMUST00000155772.1	processed_transcript	-
chr10_10439026_10439980	chr10	10439026	10439980	ENSMUSG00000019828.7	Grm1	ENSMUST00000155772.1	processed_transcript	-
chr10_10799462_10802265	chr10	10799462	10802265	ENSMUSG00000019828.7	Grm1	ENSMUST00000156826.1	processed_transcript	-
chr10_10799462_10802265	chr10	10799462	10802265	ENSMUSG00000019828.7	Grm1	ENSMUST00000105560.1	protein_coding	-
chr10_10799462_10802265	chr10	10799462	10802265	ENSMUSG00000019828.7	Grm1	ENSMUST00000105561.2	protein_coding	-
chr10_10799462_10802265	chr10	10799462	10802265	ENSMUSG00000019828.7	Grm1	ENSMUST00000044306.6	protein_coding	-
chr10_10868624_10870113	chr10	10868624	10870113	ENSMUSG00000090112.2	Shprh	ENSMUST00000159810.1	nonsense_mediated_decay	+
chr10_10868624_10870113	chr10	10868624	10870113	ENSMUSG00000090112.2	Shprh	ENSMUST00000044053.6	protein_coding	+
chr10_10868624_10870113	chr10	10868624	10870113	ENSMUSG00000090112.2	Shprh	ENSMUST00000161858.1	retained_intron	+
chr10_10868624_10870113	chr10	10868624	10870113	ENSMUSG00000090112.2	Shprh	ENSMUST00000054814.7	protein_coding	+
chr10_10868624_10870113	chr10	10868624	10870113	ENSMUSG00000090112.2	Shprh	ENSMUST00000159541.1	protein_coding	+
chr10_10886371_10886719	chr10	10886371	10886719	ENSMUSG00000090112.2	Shprh	ENSMUST00000159553.1	retained_intron	+
chr10_11000013_11002330	chr10	11000013	11002330	ENSMUSG00000047648.7	Fbxo30	ENSMUST00000129456.1	protein_coding	+
chr10_11000013_11002330	chr10	11000013	11002330	ENSMUSG00000047648.7	Fbxo30	ENSMUST00000070300.4	protein_coding	+
chr10_11000013_11002330	chr10	11000013	11002330	ENSMUSG00000085480.1	4930432B10Rik	ENSMUST00000154719.1	lincRNA	-
chr10_11000013_11002330	chr10	11000013	11002330	ENSMUSG00000085480.1	4930432B10Rik	ENSMUST00000134889.1	lincRNA	-
chr10_11062540_11064300	chr10	11062540	11064300	ENSMUSG00000055493.4	Epm2a	ENSMUST00000069106.4	protein_coding	+
chr10_11062540_11064300	chr10	11062540	11064300	ENSMUSG00000055493.4	Epm2a	ENSMUST00000161438.1	processed_transcript	+
chr10_12334111_12335192	chr10	12334111	12335192	ENSMUSG00000019820.8	Utrn	ENSMUST00000064997.5	protein_coding	-
chr10_12532451_12534075	chr10	12532451	12534075	ENSMUSG00000019820.8	Utrn	ENSMUST00000105549.2	protein_coding	-
chr10_12586486_12589534	chr10	12586486	12589534	ENSMUSG00000019820.8	Utrn	ENSMUST00000171669.1	protein_coding	-
chr10_12641973_12643453	chr10	12641973	12643453	ENSMUSG00000085233.1	B230208H11Rik	ENSMUST00000132203.1	lincRNA	-
chr10_12641973_12643453	chr10	12641973	12643453	ENSMUSG00000085233.1	B230208H11Rik	ENSMUST00000150751.1	lincRNA	-
chr10_12683006_12684866	chr10	12683006	12684866	ENSMUSG00000039232.5	Stx11	ENSMUST00000042861.5	protein_coding	-
chr10_12683006_12684866	chr10	12683006	12684866	ENSMUSG00000039232.5	Stx11	ENSMUST00000163425.1	protein_coding	-
chr10_12727630_12728945	chr10	12727630	12728945	ENSMUSG00000078348.3	Sf3b5	ENSMUST00000105139.3	protein_coding	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000123135.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000135095.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000121646.1	protein_coding	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000124252.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000121325.1	protein_coding	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000130894.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000129989.1	retained_intron	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000144437.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000130449.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000139262.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000135826.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000138433.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000150773.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000149881.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000141068.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000126880.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000135261.1	processed_transcript	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000105548.2	protein_coding	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000121766.1	protein_coding	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000130638.1	retained_intron	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000130800.1	retained_intron	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000141944.1	retained_intron	+
chr10_12810031_12811341	chr10	12810031	12811341	ENSMUSG00000019817.11	Plagl1	ENSMUST00000143582.1	protein_coding	+
chr10_12912081_12913866	chr10	12912081	12913866	ENSMUSG00000019814.4	Ltv1	ENSMUST00000019950.4	protein_coding	-
chr10_13042911_13044660	chr10	13042911	13044660	ENSMUSG00000062866.8	Phactr2	ENSMUST00000105543.1	protein_coding	-
chr10_13042911_13044660	chr10	13042911	13044660	ENSMUSG00000062866.8	Phactr2	ENSMUST00000105545.3	protein_coding	-
chr10_13108159_13109169	chr10	13108159	13109169	ENSMUSG00000062866.8	Phactr2	ENSMUST00000154265.1	processed_transcript	-
chr10_13108159_13109169	chr10	13108159	13109169	ENSMUSG00000062866.8	Phactr2	ENSMUST00000079698.5	protein_coding	-
chr10_13108159_13109169	chr10	13108159	13109169	ENSMUSG00000062866.8	Phactr2	ENSMUST00000105546.1	protein_coding	-
chr10_13193169_13195412	chr10	13193169	13195412	ENSMUSG00000062866.8	Phactr2	ENSMUST00000105547.1	protein_coding	-
chr10_13218798_13219781	chr10	13218798	13219781	ENSMUSG00000019810.9	Fuca2	ENSMUST00000130865.1	protein_coding	+
chr10_13218798_13219781	chr10	13218798	13219781	ENSMUSG00000019810.9	Fuca2	ENSMUST00000120549.1	protein_coding	+
chr10_13220320_13222784	chr10	13220320	13222784	ENSMUSG00000019810.9	Fuca2	ENSMUST00000060212.6	protein_coding	+
chr10_13220320_13222784	chr10	13220320	13222784	ENSMUSG00000019810.9	Fuca2	ENSMUST00000121465.2	protein_coding	+
chr10_13220320_13222784	chr10	13220320	13222784	ENSMUSG00000019810.9	Fuca2	ENSMUST00000150048.1	retained_intron	+
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019808.8	Adat2	ENSMUST00000019944.8	protein_coding	+
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019809.10	Pex3	ENSMUST00000145337.1	processed_transcript	-
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019809.10	Pex3	ENSMUST00000125207.1	processed_transcript	-
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019809.10	Pex3	ENSMUST00000105539.1	protein_coding	-
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019809.10	Pex3	ENSMUST00000019945.8	protein_coding	-
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019809.10	Pex3	ENSMUST00000105541.1	protein_coding	-
chr10_13272153_13273814	chr10	13272153	13273814	ENSMUSG00000019809.10	Pex3	ENSMUST00000170376.1	protein_coding	-
chr10_13580808_13581884	chr10	13580808	13581884	ENSMUSG00000019806.7	Aig1	ENSMUST00000162798.1	retained_intron	-
chr10_13587723_13589937	chr10	13587723	13589937	ENSMUSG00000019806.7	Aig1	ENSMUST00000162869.1	processed_transcript	-
chr10_13587723_13589937	chr10	13587723	13589937	ENSMUSG00000019806.7	Aig1	ENSMUST00000161729.1	retained_intron	-
chr10_13587723_13589937	chr10	13587723	13589937	ENSMUSG00000019806.7	Aig1	ENSMUST00000019942.5	protein_coding	-
chr10_13587723_13589937	chr10	13587723	13589937	ENSMUSG00000019806.7	Aig1	ENSMUST00000105534.3	protein_coding	-
chr10_13587723_13589937	chr10	13587723	13589937	ENSMUSG00000019806.7	Aig1	ENSMUST00000162610.1	protein_coding	-
chr10_13683879_13686918	chr10	13683879	13686918	ENSMUSG00000015501.4	Hivep2	ENSMUST00000015645.4	protein_coding	+
chr10_13953128_13953868	chr10	13953128	13953868	ENSMUSG00000089333.1	SNORA17	ENSMUST00000158708.1	snoRNA	+
chr10_14264274_14265507	chr10	14264274	14265507	ENSMUSG00000039116.4	Gpr126	ENSMUST00000041168.4	protein_coding	-
chr10_14424555_14425780	chr10	14424555	14425780	ENSMUSG00000019868.9	Vta1	ENSMUST00000151805.1	processed_transcript	-
chr10_14424555_14425780	chr10	14424555	14425780	ENSMUSG00000019868.9	Vta1	ENSMUST00000149485.1	protein_coding	-
chr10_14424555_14425780	chr10	14424555	14425780	ENSMUSG00000019868.9	Vta1	ENSMUST00000020018.5	nonsense_mediated_decay	-
chr10_14424555_14425780	chr10	14424555	14425780	ENSMUSG00000019868.9	Vta1	ENSMUST00000100058.4	protein_coding	-
chr10_14424555_14425780	chr10	14424555	14425780	ENSMUSG00000019868.9	Vta1	ENSMUST00000154132.1	protein_coding	-
chr10_14479334_14480723	chr10	14479334	14480723	ENSMUSG00000019865.3	Nmbr	ENSMUST00000020015.3	protein_coding	+
chr10_14479334_14480723	chr10	14479334	14480723	ENSMUSG00000090645.1	B230364G03Rik	ENSMUST00000164901.1	lincRNA	-
chr10_17441433_17443579	chr10	17441433	17443579	ENSMUSG00000039910.8	Cited2	ENSMUST00000038107.7	protein_coding	+
chr10_17441433_17443579	chr10	17441433	17443579	ENSMUSG00000039910.8	Cited2	ENSMUST00000105529.1	protein_coding	+
chr10_17443622_17444413	chr10	17443622	17444413	ENSMUSG00000039910.8	Cited2	ENSMUST00000105529.1	protein_coding	+
chr10_17515263_17517764	chr10	17515263	17517764	ENSMUSG00000039891.5	Txlnb	ENSMUST00000037964.5	protein_coding	+
chr10_17666630_17668624	chr10	17666630	17668624	ENSMUSG00000039879.7	Heca	ENSMUST00000037879.6	protein_coding	-
chr10_17741413_17743341	chr10	17741413	17743341	ENSMUSG00000078453.2	3110003A17Rik	ENSMUST00000020002.7	protein_coding	-
chr10_17774746_17776694	chr10	17774746	17776694	ENSMUSG00000019854.9	Reps1	ENSMUST00000154718.1	protein_coding	+
chr10_17774746_17776694	chr10	17774746	17776694	ENSMUSG00000019854.9	Reps1	ENSMUST00000155284.1	nonsense_mediated_decay	+
chr10_17774746_17776694	chr10	17774746	17776694	ENSMUSG00000019854.9	Reps1	ENSMUST00000126390.1	protein_coding	+
chr10_17774746_17776694	chr10	17774746	17776694	ENSMUSG00000019854.9	Reps1	ENSMUST00000164556.1	protein_coding	+
chr10_17774746_17776694	chr10	17774746	17776694	ENSMUSG00000019854.9	Reps1	ENSMUST00000020001.7	protein_coding	+
chr10_17774746_17776694	chr10	17774746	17776694	ENSMUSG00000019854.9	Reps1	ENSMUST00000150029.1	protein_coding	+
chr10_17939236_17939507	chr10	17939236	17939507	ENSMUSG00000059554.6	Ccdc28a	ENSMUST00000173962.1	protein_coding	-
chr10_17954125_17955580	chr10	17954125	17955580	ENSMUSG00000075308.2	Gm10827	ENSMUST00000100055.2	lincRNA	+
chr10_17954125_17955580	chr10	17954125	17955580	ENSMUSG00000059554.6	Ccdc28a	ENSMUST00000052648.8	protein_coding	-
chr10_17954125_17955580	chr10	17954125	17955580	ENSMUSG00000059554.6	Ccdc28a	ENSMUST00000173243.1	protein_coding	-
chr10_17954125_17955580	chr10	17954125	17955580	ENSMUSG00000059554.6	Ccdc28a	ENSMUST00000080860.6	protein_coding	-
chr10_18109780_18110147	chr10	18109780	18110147	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000159299.1	nonsense_mediated_decay	+
chr10_18126624_18127839	chr10	18126624	18127839	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000161510.1	processed_transcript	+
chr10_18126624_18127839	chr10	18126624	18127839	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000037341.7	protein_coding	+
chr10_18126624_18127839	chr10	18126624	18127839	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000160602.1	retained_intron	+
chr10_18188990_18190831	chr10	18188990	18190831	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000160547.1	retained_intron	+
chr10_18188990_18190831	chr10	18188990	18190831	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000160600.1	processed_transcript	+
chr10_18188990_18190831	chr10	18188990	18190831	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000162891.1	protein_coding	+
chr10_18188990_18190831	chr10	18188990	18190831	ENSMUSG00000039835.9	Nhsl1	ENSMUST00000100054.3	protein_coding	+
chr10_18265237_18266377	chr10	18265237	18266377	ENSMUSG00000019853.5	Hebp2	ENSMUST00000020000.5	protein_coding	-
chr10_18462996_18463991	chr10	18462996	18463991	ENSMUSG00000019852.6	D10Bwg1379e	ENSMUST00000019999.5	protein_coding	-
chr10_18504646_18504870	chr10	18504646	18504870	ENSMUSG00000044624.6	Gm4922	ENSMUST00000055107.6	protein_coding	-
chr10_18563967_18567169	chr10	18563967	18567169	ENSMUSG00000019851.7	Perp	ENSMUST00000019998.7	protein_coding	+
chr10_18727671_18728864	chr10	18727671	18728864	ENSMUSG00000019850.5	Tnfaip3	ENSMUST00000154749.1	retained_intron	-
chr10_18731602_18731870	chr10	18731602	18731870	ENSMUSG00000019850.5	Tnfaip3	ENSMUST00000105527.1	protein_coding	-
chr10_18734027_18736035	chr10	18734027	18736035	ENSMUSG00000019850.5	Tnfaip3	ENSMUST00000146388.1	protein_coding	-
chr10_18734027_18736035	chr10	18734027	18736035	ENSMUSG00000019850.5	Tnfaip3	ENSMUST00000122863.1	protein_coding	-
chr10_18734027_18736035	chr10	18734027	18736035	ENSMUSG00000019850.5	Tnfaip3	ENSMUST00000154590.1	retained_intron	-
chr10_18734027_18736035	chr10	18734027	18736035	ENSMUSG00000019850.5	Tnfaip3	ENSMUST00000019997.4	protein_coding	-
chr10_19075703_19077301	chr10	19075703	19077301	ENSMUSG00000045591.5	Olig3	ENSMUST00000053225.5	protein_coding	+
chr10_19311090_19312663	chr10	19311090	19312663	ENSMUSG00000020009.6	Ifngr1	ENSMUST00000020188.6	protein_coding	+
chr10_19311090_19312663	chr10	19311090	19312663	ENSMUSG00000020009.6	Ifngr1	ENSMUST00000110989.2	retained_intron	+
chr10_19311090_19312663	chr10	19311090	19312663	ENSMUSG00000020009.6	Ifngr1	ENSMUST00000164591.1	nonsense_mediated_decay	+
chr10_19311090_19312663	chr10	19311090	19312663	ENSMUSG00000020009.6	Ifngr1	ENSMUST00000171772.1	nonsense_mediated_decay	+
chr10_19311090_19312663	chr10	19311090	19312663	ENSMUSG00000020009.6	Ifngr1	ENSMUST00000172253.1	nonsense_mediated_decay	+
chr10_19341235_19341631	chr10	19341235	19341631	ENSMUSG00000039760.8	Il22ra2	ENSMUST00000036564.7	protein_coding	+
chr10_19364417_19365281	chr10	19364417	19365281	ENSMUSG00000042940.7	9230106D20Rik	ENSMUST00000052806.7	protein_coding	+
chr10_19431835_19432847	chr10	19431835	19432847	ENSMUSG00000020007.3	Il20ra	ENSMUST00000020185.3	protein_coding	+
chr10_19570266_19572121	chr10	19570266	19572121	ENSMUSG00000050473.4	Slc35d3	ENSMUST00000059805.4	protein_coding	-
chr10_19626837_19628644	chr10	19626837	19628644	ENSMUSG00000020003.9	Pex7	ENSMUST00000134220.1	protein_coding	-
chr10_19626837_19628644	chr10	19626837	19628644	ENSMUSG00000020003.9	Pex7	ENSMUST00000166511.1	protein_coding	-
chr10_19626837_19628644	chr10	19626837	19628644	ENSMUSG00000020003.9	Pex7	ENSMUST00000020182.8	protein_coding	-
chr10_19653188_19655449	chr10	19653188	19655449	ENSMUSG00000071369.4	Map3k5	ENSMUST00000095806.3	protein_coding	+
chr10_19653188_19655449	chr10	19653188	19655449	ENSMUSG00000071369.4	Map3k5	ENSMUST00000120259.1	protein_coding	+
chr10_19653188_19655449	chr10	19653188	19655449	ENSMUSG00000071369.4	Map3k5	ENSMUST00000129437.1	protein_coding	+
chr10_19844362_19845572	chr10	19844362	19845572	ENSMUSG00000071369.4	Map3k5	ENSMUST00000156369.1	retained_intron	+
chr10_19847136_19847914	chr10	19847136	19847914	ENSMUSG00000071369.4	Map3k5	ENSMUST00000142726.1	retained_intron	+
chr10_19867623_19870498	chr10	19867623	19870498	ENSMUSG00000019996.9	Mtap7	ENSMUST00000116259.2	protein_coding	+
chr10_19867623_19870498	chr10	19867623	19870498	ENSMUSG00000019996.9	Mtap7	ENSMUST00000020173.7	protein_coding	+
chr10_20067145_20068174	chr10	20067145	20068174	ENSMUSG00000019992.6	Fam54a	ENSMUST00000169712.1	protein_coding	+
chr10_20067145_20068174	chr10	20067145	20068174	ENSMUSG00000019992.6	Fam54a	ENSMUST00000020167.6	protein_coding	+
chr10_20237223_20238138	chr10	20237223	20238138	ENSMUSG00000068638.2	4930403O15Rik	ENSMUST00000097355.3	processed_transcript	-
chr10_20267501_20269294	chr10	20267501	20269294	ENSMUSG00000019990.8	Pde7b	ENSMUST00000164195.1	protein_coding	-
chr10_20267501_20269294	chr10	20267501	20269294	ENSMUSG00000019990.8	Pde7b	ENSMUST00000169404.1	protein_coding	-
chr10_20267501_20269294	chr10	20267501	20269294	ENSMUSG00000019990.8	Pde7b	ENSMUST00000169016.1	nonsense_mediated_decay	-
chr10_20444144_20445899	chr10	20444144	20445899	ENSMUSG00000019990.8	Pde7b	ENSMUST00000166147.1	retained_intron	-
chr10_20444144_20445899	chr10	20444144	20445899	ENSMUSG00000019990.8	Pde7b	ENSMUST00000170683.1	retained_intron	-
chr10_20444144_20445899	chr10	20444144	20445899	ENSMUSG00000019990.8	Pde7b	ENSMUST00000170265.1	protein_coding	-
chr10_20444144_20445899	chr10	20444144	20445899	ENSMUSG00000019990.8	Pde7b	ENSMUST00000020165.7	protein_coding	-
chr10_20671447_20673135	chr10	20671447	20673135	ENSMUSG00000019986.9	Ahi1	ENSMUST00000105525.3	protein_coding	+
chr10_20671447_20673135	chr10	20671447	20673135	ENSMUSG00000019986.9	Ahi1	ENSMUST00000095801.5	protein_coding	+
chr10_20864208_20865498	chr10	20864208	20865498	ENSMUSG00000084914.1	Gm16786	ENSMUST00000142886.1	lincRNA	+
chr10_20880327_20881659	chr10	20880327	20881659	ENSMUSG00000019982.7	Myb	ENSMUST00000169315.1	protein_coding	-
chr10_20880327_20881659	chr10	20880327	20881659	ENSMUSG00000019982.7	Myb	ENSMUST00000020158.6	protein_coding	-
chr10_20880327_20881659	chr10	20880327	20881659	ENSMUSG00000019982.7	Myb	ENSMUST00000020156.6	protein_coding	-
chr10_21015212_21016511	chr10	21015212	21016511	ENSMUSG00000019977.9	Hbs1l	ENSMUST00000020153.8	protein_coding	+
chr10_21015212_21016511	chr10	21015212	21016511	ENSMUSG00000019977.9	Hbs1l	ENSMUST00000092674.6	protein_coding	+
chr10_21096439_21097767	chr10	21096439	21097767	ENSMUSG00000037542.7	Aldh8a1	ENSMUST00000042699.7	protein_coding	+
chr10_21096439_21097767	chr10	21096439	21097767	ENSMUSG00000037542.7	Aldh8a1	ENSMUST00000161285.1	retained_intron	+
chr10_21096439_21097767	chr10	21096439	21097767	ENSMUSG00000037542.7	Aldh8a1	ENSMUST00000159163.1	protein_coding	+
chr10_21144248_21144944	chr10	21144248	21144944	ENSMUSG00000037535.3	1700021A07Rik	ENSMUST00000042671.3	protein_coding	+
chr10_21308205_21308980	chr10	21308205	21308980	ENSMUSG00000088467.1	snoU13	ENSMUST00000157842.1	snoRNA	+
chr10_21312766_21313335	chr10	21312766	21313335	ENSMUSG00000050844.4	1700020N01Rik	ENSMUST00000057341.4	protein_coding	+
chr10_21563777_21564811	chr10	21563777	21564811	ENSMUSG00000085422.1	Gm6846	ENSMUST00000128552.1	lincRNA	-
chr10_21601388_21603021	chr10	21601388	21603021	ENSMUSG00000019970.9	Sgk1	ENSMUST00000120509.1	protein_coding	+
chr10_21601388_21603021	chr10	21601388	21603021	ENSMUSG00000019970.9	Sgk1	ENSMUST00000143094.1	processed_transcript	+
chr10_21712804_21715014	chr10	21712804	21715014	ENSMUSG00000019970.9	Sgk1	ENSMUST00000092673.4	protein_coding	+
chr10_21712804_21715014	chr10	21712804	21715014	ENSMUSG00000019970.9	Sgk1	ENSMUST00000020145.5	protein_coding	+
chr10_21712804_21715014	chr10	21712804	21715014	ENSMUSG00000019970.9	Sgk1	ENSMUST00000141218.1	retained_intron	+
chr10_21712804_21715014	chr10	21712804	21715014	ENSMUSG00000019970.9	Sgk1	ENSMUST00000126560.1	retained_intron	+
chr10_21712804_21715014	chr10	21712804	21715014	ENSMUSG00000019970.9	Sgk1	ENSMUST00000124350.1	protein_coding	+
chr10_21768219_21768503	chr10	21768219	21768503	ENSMUSG00000090535.1	Gm8540	ENSMUST00000168952.1	transcribed_unprocessed_pseudogene	-
chr10_21787445_21787895	chr10	21787445	21787895	ENSMUSG00000069712.3	4930444G20Rik	ENSMUST00000092672.3	protein_coding	-
chr10_21868078_21869992	chr10	21868078	21869992	ENSMUSG00000055657.7	E030030I06Rik	ENSMUST00000069372.5	protein_coding	-
chr10_21873792_21874058	chr10	21873792	21874058	ENSMUSG00000044268.2	Gm4895	ENSMUST00000053212.2	retrotransposed	-
chr10_21878115_21878518	chr10	21878115	21878518	ENSMUSG00000075297.4	H60b	ENSMUST00000105522.2	protein_coding	+
chr10_21992870_21994348	chr10	21992870	21994348	ENSMUSG00000075297.4	H60b	ENSMUST00000131558.1	protein_coding	+
chr10_22080925_22081709	chr10	22080925	22081709	ENSMUSG00000078452.2	Raet1d	ENSMUST00000095795.3	protein_coding	+
chr10_22364021_22365569	chr10	22364021	22365569	ENSMUSG00000037490.5	Slc2a12	ENSMUST00000042261.4	protein_coding	+
chr10_22368401_22368996	chr10	22368401	22368996	ENSMUSG00000037490.5	Slc2a12	ENSMUST00000159174.1	processed_transcript	+
chr10_22425655_22426251	chr10	22425655	22426251	ENSMUSG00000071359.6	Tbpl1	ENSMUST00000141569.1	processed_transcript	-
chr10_22450109_22452346	chr10	22450109	22452346	ENSMUSG00000071359.6	Tbpl1	ENSMUST00000138022.1	retained_intron	-
chr10_22450109_22452346	chr10	22450109	22452346	ENSMUSG00000071359.6	Tbpl1	ENSMUST00000095794.3	protein_coding	-
chr10_22450109_22452346	chr10	22450109	22452346	ENSMUSG00000071359.6	Tbpl1	ENSMUST00000092668.6	protein_coding	-
chr10_22450109_22452346	chr10	22450109	22452346	ENSMUSG00000071359.6	Tbpl1	ENSMUST00000127698.1	protein_coding	-
chr10_22539297_22540378	chr10	22539297	22540378	ENSMUSG00000045680.7	Tcf21	ENSMUST00000049930.7	protein_coding	-
chr10_23068235_23070676	chr10	23068235	23070676	ENSMUSG00000010461.7	Eya4	ENSMUST00000074366.5	protein_coding	-
chr10_23068235_23070676	chr10	23068235	23070676	ENSMUSG00000010461.7	Eya4	ENSMUST00000092665.4	protein_coding	-
chr10_23506442_23508353	chr10	23506442	23508353	ENSMUSG00000077440.1	SNORD101	ENSMUST00000104252.1	snoRNA	-
chr10_23506442_23508353	chr10	23506442	23508353	ENSMUSG00000061983.5	Rps12	ENSMUST00000073926.5	protein_coding	-
chr10_23515987_23517660	chr10	23515987	23517660	ENSMUSG00000037455.9	1110021L09Rik	ENSMUST00000119597.1	protein_coding	+
chr10_23515987_23517660	chr10	23515987	23517660	ENSMUSG00000037455.9	1110021L09Rik	ENSMUST00000134170.1	nonsense_mediated_decay	+
chr10_23515987_23517660	chr10	23515987	23517660	ENSMUSG00000037455.9	1110021L09Rik	ENSMUST00000133289.1	protein_coding	+
chr10_23571036_23572775	chr10	23571036	23572775	ENSMUSG00000020010.7	Vnn3	ENSMUST00000020190.7	protein_coding	+
chr10_23613867_23615154	chr10	23613867	23615154	ENSMUSG00000037440.7	Vnn1	ENSMUST00000041416.7	protein_coding	+
chr10_23658255_23658552	chr10	23658255	23658552	ENSMUSG00000059763.4	Taar2	ENSMUST00000079134.4	protein_coding	+
chr10_23669328_23670001	chr10	23669328	23670001	ENSMUSG00000069708.2	Taar3	ENSMUST00000045152.4	protein_coding	+
chr10_23868569_23870447	chr10	23868569	23870447	ENSMUSG00000019998.5	Stx7	ENSMUST00000020174.5	protein_coding	+
chr10_23943168_23943805	chr10	23943168	23943805	ENSMUSG00000020000.7	Moxd1	ENSMUST00000095784.2	protein_coding	+
chr10_23943168_23943805	chr10	23943168	23943805	ENSMUSG00000020000.7	Moxd1	ENSMUST00000154916.1	processed_transcript	+
chr10_24166974_24168743	chr10	24166974	24168743	ENSMUSG00000086148.1	Gm15271	ENSMUST00000134627.1	lincRNA	+
chr10_24313311_24313688	chr10	24313311	24313688	ENSMUSG00000087400.1	Gm15270	ENSMUST00000141076.1	processed_transcript	-
chr10_24315026_24317316	chr10	24315026	24317316	ENSMUSG00000019997.4	Ctgf	ENSMUST00000020171.4	protein_coding	+
chr10_24315026_24317316	chr10	24315026	24317316	ENSMUSG00000019997.4	Ctgf	ENSMUST00000129142.1	retained_intron	+
chr10_24315026_24317316	chr10	24315026	24317316	ENSMUSG00000087400.1	Gm15270	ENSMUST00000125158.1	processed_transcript	-
chr10_24315026_24317316	chr10	24315026	24317316	ENSMUSG00000087400.1	Gm15270	ENSMUST00000148709.1	processed_transcript	-
chr10_24315026_24317316	chr10	24315026	24317316	ENSMUSG00000087400.1	Gm15270	ENSMUST00000136908.1	processed_transcript	-
chr10_24394056_24394556	chr10	24394056	24394556	ENSMUSG00000037370.7	Enpp1	ENSMUST00000142974.1	retained_intron	-
chr10_24430590_24432781	chr10	24430590	24432781	ENSMUSG00000037370.7	Enpp1	ENSMUST00000150570.1	retained_intron	-
chr10_24430590_24432781	chr10	24430590	24432781	ENSMUSG00000037370.7	Enpp1	ENSMUST00000135846.1	protein_coding	-
chr10_24430590_24432781	chr10	24430590	24432781	ENSMUSG00000037370.7	Enpp1	ENSMUST00000039882.6	nonsense_mediated_decay	-
chr10_24430590_24432781	chr10	24430590	24432781	ENSMUSG00000037370.7	Enpp1	ENSMUST00000105520.1	protein_coding	-
chr10_24555465_24556587	chr10	24555465	24556587	ENSMUSG00000019989.7	Enpp3	ENSMUST00000020169.7	protein_coding	-
chr10_24589301_24590308	chr10	24589301	24590308	ENSMUSG00000019984.8	Med23	ENSMUST00000092646.5	protein_coding	+
chr10_24589301_24590308	chr10	24589301	24590308	ENSMUSG00000019984.8	Med23	ENSMUST00000020159.7	protein_coding	+
chr10_24589301_24590308	chr10	24589301	24590308	ENSMUSG00000019984.8	Med23	ENSMUST00000168046.1	protein_coding	+
chr10_24589301_24590308	chr10	24589301	24590308	ENSMUSG00000019984.8	Med23	ENSMUST00000171625.1	protein_coding	+
chr10_24646821_24647552	chr10	24646821	24647552	ENSMUSG00000019987.8	Arg1	ENSMUST00000020161.8	protein_coding	-
chr10_24917969_24920880	chr10	24917969	24920880	ENSMUSG00000039166.8	Akap7	ENSMUST00000100012.1	protein_coding	-
chr10_25016111_25019439	chr10	25016111	25019439	ENSMUSG00000039166.8	Akap7	ENSMUST00000095779.3	protein_coding	-
chr10_25016111_25019439	chr10	25016111	25019439	ENSMUSG00000039166.8	Akap7	ENSMUST00000041984.6	protein_coding	-
chr10_25079005_25080726	chr10	25079005	25080726	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000053748.7	protein_coding	+
chr10_25079005_25080726	chr10	25079005	25080726	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000061367.5	protein_coding	+
chr10_25079005_25080726	chr10	25079005	25080726	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000068469.5	protein_coding	+
chr10_25079005_25080726	chr10	25079005	25080726	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000020151.5	protein_coding	+
chr10_25079005_25080726	chr10	25079005	25080726	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000053095.6	protein_coding	+
chr10_25128002_25128258	chr10	25128002	25128258	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000092645.5	protein_coding	+
chr10_25161071_25161992	chr10	25161071	25161992	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000166704.1	protein_coding	+
chr10_25161071_25161992	chr10	25161071	25161992	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000092644.5	protein_coding	+
chr10_25161071_25161992	chr10	25161071	25161992	ENSMUSG00000019978.8	Epb4.1l2	ENSMUST00000061084.6	protein_coding	+
chr10_25796725_25799306	chr10	25796725	25799306	ENSMUSG00000039098.3	Gm9767	ENSMUST00000041011.3	protein_coding	+
chr10_25796725_25799306	chr10	25796725	25799306	ENSMUSG00000092001.1	Tmem200a	ENSMUST00000163191.1	protein_coding	-
chr10_25949268_25949697	chr10	25949268	25949697	ENSMUSG00000051354.6	Samd3	ENSMUST00000060716.5	protein_coding	+
chr10_25949268_25949697	chr10	25949268	25949697	ENSMUSG00000051354.6	Samd3	ENSMUST00000095777.3	protein_coding	+
chr10_25949268_25949697	chr10	25949268	25949697	ENSMUSG00000051354.6	Samd3	ENSMUST00000164660.1	protein_coding	+
chr10_26033622_26034745	chr10	26033622	26034745	ENSMUSG00000039089.7	L3mbtl3	ENSMUST00000164043.1	protein_coding	-
chr10_26092748_26094328	chr10	26092748	26094328	ENSMUSG00000039089.7	L3mbtl3	ENSMUST00000040219.6	protein_coding	-
chr10_26092748_26094328	chr10	26092748	26094328	ENSMUSG00000039089.7	L3mbtl3	ENSMUST00000105519.3	protein_coding	-
chr10_26094398_26095008	chr10	26094398	26095008	ENSMUSG00000039089.7	L3mbtl3	ENSMUST00000174766.1	protein_coding	-
chr10_26095111_26096723	chr10	26095111	26096723	ENSMUSG00000039089.7	L3mbtl3	ENSMUST00000174766.1	protein_coding	-
chr10_26491708_26493709	chr10	26491708	26493709	ENSMUSG00000039031.8	Arhgap18	ENSMUST00000039557.7	protein_coding	+
chr10_26542216_26542783	chr10	26542216	26542783	ENSMUSG00000039031.8	Arhgap18	ENSMUST00000135866.1	processed_transcript	+
chr10_27335798_27337317	chr10	27335798	27337317	ENSMUSG00000019899.8	Lama2	ENSMUST00000092638.4	protein_coding	-
chr10_27335798_27337317	chr10	27335798	27337317	ENSMUSG00000019899.8	Lama2	ENSMUST00000169199.1	protein_coding	-
chr10_27335798_27337317	chr10	27335798	27337317	ENSMUSG00000019899.8	Lama2	ENSMUST00000092639.5	protein_coding	-
chr10_27793774_27796660	chr10	27793774	27796660	ENSMUSG00000019889.8	Ptprk	ENSMUST00000166468.1	protein_coding	+
chr10_27793774_27796660	chr10	27793774	27796660	ENSMUSG00000019889.8	Ptprk	ENSMUST00000169336.1	protein_coding	+
chr10_27793774_27796660	chr10	27793774	27796660	ENSMUSG00000019889.8	Ptprk	ENSMUST00000020042.8	protein_coding	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000060409.6	protein_coding	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000056097.4	protein_coding	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000162343.1	retained_intron	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000105516.2	protein_coding	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000159927.1	nonsense_mediated_decay	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000162202.1	nonsense_mediated_decay	+
chr10_28387814_28389192	chr10	28387814	28389192	ENSMUSG00000049109.8	Themis	ENSMUST00000161345.1	protein_coding	+
chr10_28863264_28864165	chr10	28863264	28864165	ENSMUSG00000038916.6	6330407J23Rik	ENSMUST00000092629.2	protein_coding	+
chr10_28863264_28864165	chr10	28863264	28864165	ENSMUSG00000056316.2	Gm9996	ENSMUST00000070359.2	protein_coding	-
chr10_28931304_28931913	chr10	28931304	28931913	ENSMUSG00000004360.8	9330159F19Rik	ENSMUST00000092627.4	protein_coding	+
chr10_29031387_29034068	chr10	29031387	29034068	ENSMUSG00000019883.4	Echdc1	ENSMUST00000160399.1	protein_coding	+
chr10_29031387_29034068	chr10	29031387	29034068	ENSMUSG00000019883.4	Echdc1	ENSMUST00000161605.1	protein_coding	+
chr10_29031387_29034068	chr10	29031387	29034068	ENSMUSG00000019883.4	Echdc1	ENSMUST00000020034.4	protein_coding	+
chr10_29031387_29034068	chr10	29031387	29034068	ENSMUSG00000019883.4	Echdc1	ENSMUST00000161426.1	processed_transcript	+
chr10_29080738_29082673	chr10	29080738	29082673	ENSMUSG00000038876.5	Rnf146	ENSMUST00000161508.1	protein_coding	-
chr10_29080738_29082673	chr10	29080738	29082673	ENSMUSG00000038876.5	Rnf146	ENSMUST00000160372.1	protein_coding	-
chr10_29080738_29082673	chr10	29080738	29082673	ENSMUSG00000038876.5	Rnf146	ENSMUST00000160144.1	protein_coding	-
chr10_29080738_29082673	chr10	29080738	29082673	ENSMUSG00000038876.5	Rnf146	ENSMUST00000037548.4	protein_coding	-
chr10_29114743_29115033	chr10	29114743	29115033	ENSMUSG00000088257.1	SNORA17	ENSMUST00000157632.1	snoRNA	+
chr10_29255204_29255783	chr10	29255204	29255783	ENSMUSG00000019880.9	Rspo3	ENSMUST00000092623.3	protein_coding	-
chr10_29919186_29920759	chr10	29919186	29920759	ENSMUSG00000075266.4	Cenpw	ENSMUST00000099985.4	protein_coding	-
chr10_30319626_30321297	chr10	30319626	30321297	ENSMUSG00000019792.6	Trmt11	ENSMUST00000116254.1	protein_coding	-
chr10_30319626_30321297	chr10	30319626	30321297	ENSMUSG00000019792.6	Trmt11	ENSMUST00000019927.6	protein_coding	-
chr10_30337410_30338948	chr10	30337410	30338948	ENSMUSG00000019791.5	Hint3	ENSMUST00000019925.5	protein_coding	-
chr10_30337410_30338948	chr10	30337410	30338948	ENSMUSG00000019791.5	Hint3	ENSMUST00000160646.1	nonsense_mediated_decay	-
chr10_30337410_30338948	chr10	30337410	30338948	ENSMUSG00000019791.5	Hint3	ENSMUST00000161074.1	protein_coding	-
chr10_30374894_30376473	chr10	30374894	30376473	ENSMUSG00000039697.8	Ncoa7	ENSMUST00000099982.2	protein_coding	-
chr10_30374894_30376473	chr10	30374894	30376473	ENSMUSG00000039697.8	Ncoa7	ENSMUST00000092610.4	protein_coding	-
chr10_30374894_30376473	chr10	30374894	30376473	ENSMUSG00000039697.8	Ncoa7	ENSMUST00000105514.2	protein_coding	-
chr10_30521865_30524066	chr10	30521865	30524066	ENSMUSG00000039697.8	Ncoa7	ENSMUST00000068567.4	protein_coding	-
chr10_30561816_30564408	chr10	30561816	30564408	ENSMUSG00000019789.8	Hey2	ENSMUST00000019924.8	protein_coding	-
chr10_31032574_31034039	chr10	31032574	31034039	ENSMUSG00000000295.6	Hddc2	ENSMUST00000000304.6	protein_coding	+
chr10_31032574_31034039	chr10	31032574	31034039	ENSMUSG00000000295.6	Hddc2	ENSMUST00000162076.1	retained_intron	+
chr10_31032574_31034039	chr10	31032574	31034039	ENSMUSG00000000295.6	Hddc2	ENSMUST00000160447.1	retained_intron	+
chr10_31032574_31034039	chr10	31032574	31034039	ENSMUSG00000000295.6	Hddc2	ENSMUST00000159194.1	nonsense_mediated_decay	+
chr10_31165033_31166600	chr10	31165033	31166600	ENSMUSG00000000296.6	Tpd52l1	ENSMUST00000169276.1	protein_coding	-
chr10_31165033_31166600	chr10	31165033	31166600	ENSMUSG00000000296.6	Tpd52l1	ENSMUST00000000305.5	protein_coding	-
chr10_31326721_31329988	chr10	31326721	31329988	ENSMUSG00000063760.6	Rnf217	ENSMUST00000081989.4	protein_coding	-
chr10_32609047_32610961	chr10	32609047	32610961	ENSMUSG00000069670.1	Nkain2	ENSMUST00000092602.1	protein_coding	-
chr10_32802790_32804073	chr10	32802790	32804073	ENSMUSG00000019787.7	Trdn	ENSMUST00000095762.4	protein_coding	+
chr10_32802790_32804073	chr10	32802790	32804073	ENSMUSG00000019787.7	Trdn	ENSMUST00000075979.6	protein_coding	+
chr10_32802790_32804073	chr10	32802790	32804073	ENSMUSG00000019787.7	Trdn	ENSMUST00000050626.7	protein_coding	+
chr10_33343166_33344781	chr10	33343166	33344781	ENSMUSG00000090087.1	Gm15939	ENSMUST00000160756.1	antisense	+
chr10_33343166_33344781	chr10	33343166	33344781	ENSMUSG00000019785.7	Clvs2	ENSMUST00000160299.1	protein_coding	-
chr10_33343166_33344781	chr10	33343166	33344781	ENSMUSG00000019785.7	Clvs2	ENSMUST00000161692.1	processed_transcript	-
chr10_33343166_33344781	chr10	33343166	33344781	ENSMUSG00000019785.7	Clvs2	ENSMUST00000159533.1	processed_transcript	-
chr10_33343166_33344781	chr10	33343166	33344781	ENSMUSG00000019785.7	Clvs2	ENSMUST00000019920.6	protein_coding	-
chr10_33624434_33625692	chr10	33624434	33625692	ENSMUSG00000039552.7	Rsph4a	ENSMUST00000169670.1	protein_coding	+
chr10_33624434_33625692	chr10	33624434	33625692	ENSMUSG00000039552.7	Rsph4a	ENSMUST00000118315.1	protein_coding	+
chr10_33670135_33671475	chr10	33670135	33671475	ENSMUSG00000039531.6	Zufsp	ENSMUST00000048222.4	protein_coding	-
chr10_33670135_33671475	chr10	33670135	33671475	ENSMUSG00000039531.6	Zufsp	ENSMUST00000065640.3	protein_coding	-
chr10_33670135_33671475	chr10	33670135	33671475	ENSMUSG00000039531.6	Zufsp	ENSMUST00000092596.3	protein_coding	-
chr10_33738476_33740081	chr10	33738476	33740081	ENSMUSG00000019782.8	Rwdd1	ENSMUST00000080041.6	protein_coding	-
chr10_33738476_33740081	chr10	33738476	33740081	ENSMUSG00000019782.8	Rwdd1	ENSMUST00000019917.5	protein_coding	-
chr10_33815111_33816922	chr10	33815111	33816922	ENSMUSG00000049872.7	Fam26e	ENSMUST00000069125.6	protein_coding	-
chr10_33846873_33848999	chr10	33846873	33848999	ENSMUSG00000046031.6	Fam26f	ENSMUST00000062784.6	protein_coding	-
chr10_33926195_33928107	chr10	33926195	33928107	ENSMUSG00000039497.7	Dse	ENSMUST00000048010.7	protein_coding	-
chr10_34001035_34003259	chr10	34001035	34003259	ENSMUSG00000047514.5	Tspyl1	ENSMUST00000061372.5	protein_coding	+
chr10_34016535_34018385	chr10	34016535	34018385	ENSMUSG00000039485.6	Tspyl4	ENSMUST00000047935.6	protein_coding	+
chr10_34018494_34018920	chr10	34018494	34018920	ENSMUSG00000091266.1	Gm17321	ENSMUST00000169908.1	lincRNA	-
chr10_34137099_34139018	chr10	34137099	34139018	ENSMUSG00000039480.7	Nt5dc1	ENSMUST00000099973.3	protein_coding	-
chr10_34137099_34139018	chr10	34137099	34139018	ENSMUSG00000039480.7	Nt5dc1	ENSMUST00000130290.1	processed_transcript	-
chr10_34137099_34139018	chr10	34137099	34139018	ENSMUSG00000039480.7	Nt5dc1	ENSMUST00000047885.7	protein_coding	-
chr10_34137099_34139018	chr10	34137099	34139018	ENSMUSG00000039480.7	Nt5dc1	ENSMUST00000105512.1	protein_coding	-
chr10_34202931_34204554	chr10	34202931	34204554	ENSMUSG00000019779.8	Frk	ENSMUST00000170771.1	protein_coding	+
chr10_34202931_34204554	chr10	34202931	34204554	ENSMUSG00000019779.8	Frk	ENSMUST00000019913.7	protein_coding	+
chr10_36225815_36227978	chr10	36225815	36227978	ENSMUSG00000044499.5	Hs3st5	ENSMUST00000167191.1	protein_coding	+
chr10_36225815_36227978	chr10	36225815	36227978	ENSMUSG00000044499.5	Hs3st5	ENSMUST00000058738.4	protein_coding	+
chr10_36225815_36227978	chr10	36225815	36227978	ENSMUSG00000044499.5	Hs3st5	ENSMUST00000172357.1	retained_intron	+
chr10_36225815_36227978	chr10	36225815	36227978	ENSMUSG00000044499.5	Hs3st5	ENSMUST00000168572.1	protein_coding	+
chr10_36225815_36227978	chr10	36225815	36227978	ENSMUSG00000044499.5	Hs3st5	ENSMUST00000171521.1	processed_transcript	+
chr10_36693536_36695420	chr10	36693536	36695420	ENSMUSG00000019777.9	Hdac2	ENSMUST00000019911.7	protein_coding	+
chr10_36693536_36695420	chr10	36693536	36695420	ENSMUSG00000019777.9	Hdac2	ENSMUST00000105510.1	protein_coding	+
chr10_36858625_36859493	chr10	36858625	36859493	ENSMUSG00000046463.3	5930403N24Rik	ENSMUST00000062667.3	protein_coding	+
chr10_36858625_36859493	chr10	36858625	36859493	ENSMUSG00000069662.4	Marcks	ENSMUST00000092584.4	protein_coding	-
chr10_37056836_37058624	chr10	37056836	37058624	ENSMUSG00000087311.1	Gm16988	ENSMUST00000156892.1	lincRNA	+
chr10_38684549_38686473	chr10	38684549	38686473	ENSMUSG00000019846.5	Lama4	ENSMUST00000019992.5	protein_coding	+
chr10_38684549_38686473	chr10	38684549	38686473	ENSMUSG00000019846.5	Lama4	ENSMUST00000159506.1	retained_intron	+
chr10_38684549_38686473	chr10	38684549	38686473	ENSMUSG00000019846.5	Lama4	ENSMUST00000162211.1	retained_intron	+
chr10_38684549_38686473	chr10	38684549	38686473	ENSMUSG00000019846.5	Lama4	ENSMUST00000161303.1	retained_intron	+
chr10_38684549_38686473	chr10	38684549	38686473	ENSMUSG00000019846.5	Lama4	ENSMUST00000159580.1	retained_intron	+
chr10_38841949_38842158	chr10	38841949	38842158	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000136546.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000019845.7	Tube1	ENSMUST00000019991.7	protein_coding	+
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000154981.1	retained_intron	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000125042.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000135785.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000124941.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000149949.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000134279.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000139743.1	protein_coding	-
chr10_38853129_38854342	chr10	38853129	38854342	ENSMUSG00000051736.2	1700025K23Rik	ENSMUST00000063204.2	protein_coding	-
chr10_39089077_39091130	chr10	39089077	39091130	ENSMUSG00000019843.8	Fyn	ENSMUST00000063091.6	protein_coding	+
chr10_39089077_39091130	chr10	39089077	39091130	ENSMUSG00000019843.8	Fyn	ENSMUST00000099967.3	protein_coding	+
chr10_39089077_39091130	chr10	39089077	39091130	ENSMUSG00000019843.8	Fyn	ENSMUST00000126486.1	protein_coding	+
chr10_39144439_39144644	chr10	39144439	39144644	ENSMUSG00000085799.1	Gm6963	ENSMUST00000147879.1	transcribed_processed_pseudogene	-
chr10_39252677_39252972	chr10	39252677	39252972	ENSMUSG00000019843.8	Fyn	ENSMUST00000123205.1	processed_transcript	+
chr10_39277181_39278177	chr10	39277181	39278177	ENSMUSG00000087014.1	Gm16364	ENSMUST00000153722.1	antisense	-
chr10_39332321_39334286	chr10	39332321	39334286	ENSMUSG00000019842.6	Traf3ip2	ENSMUST00000019987.6	protein_coding	+
chr10_39332321_39334286	chr10	39332321	39334286	ENSMUSG00000086915.1	Gm16365	ENSMUST00000143877.1	antisense	-
chr10_39332321_39334286	chr10	39332321	39334286	ENSMUSG00000086915.1	Gm16365	ENSMUST00000124241.1	antisense	-
chr10_39332321_39334286	chr10	39332321	39334286	ENSMUSG00000086915.1	Gm16365	ENSMUST00000142723.1	antisense	-
chr10_39360344_39361105	chr10	39360344	39361105	ENSMUSG00000019842.6	Traf3ip2	ENSMUST00000129693.1	retained_intron	+
chr10_39365696_39367676	chr10	39365696	39367676	ENSMUSG00000019842.6	Traf3ip2	ENSMUST00000131629.1	processed_transcript	+
chr10_39365696_39367676	chr10	39365696	39367676	ENSMUSG00000019842.6	Traf3ip2	ENSMUST00000156016.1	retained_intron	+
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000019841.8	Rev3l	ENSMUST00000019986.6	protein_coding	+
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000019841.8	Rev3l	ENSMUST00000131186.1	nonsense_mediated_decay	+
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000019841.8	Rev3l	ENSMUST00000164763.1	protein_coding	+
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000019841.8	Rev3l	ENSMUST00000171506.1	protein_coding	+
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000153113.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000155482.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000149830.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000145971.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000153261.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000139429.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000133302.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000139356.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000143651.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000151921.1	processed_transcript	-
chr10_39450727_39453633	chr10	39450727	39453633	ENSMUSG00000087177.1	E130307A14Rik	ENSMUST00000129191.1	processed_transcript	-
chr10_39618111_39619518	chr10	39618111	39619518	ENSMUSG00000075243.3	4930547M16Rik	ENSMUST00000099957.3	lincRNA	+
chr10_39646202_39647018	chr10	39646202	39647018	ENSMUSG00000039339.3	2010001E11Rik	ENSMUST00000045526.3	protein_coding	-
chr10_39677948_39680595	chr10	39677948	39680595	ENSMUSG00000071335.4	G630090E17Rik	ENSMUST00000095749.4	protein_coding	-
chr10_39694848_39695261	chr10	39694848	39695261	ENSMUSG00000038528.8	BC021785	ENSMUST00000170505.1	protein_coding	-
chr10_39706143_39706720	chr10	39706143	39706720	ENSMUSG00000038528.8	BC021785	ENSMUST00000045524.6	protein_coding	-
chr10_39706143_39706720	chr10	39706143	39706720	ENSMUSG00000038528.8	BC021785	ENSMUST00000170579.1	protein_coding	-
chr10_39706143_39706720	chr10	39706143	39706720	ENSMUSG00000038528.8	BC021785	ENSMUST00000164566.1	protein_coding	-
chr10_39706143_39706720	chr10	39706143	39706720	ENSMUSG00000038528.8	BC021785	ENSMUST00000073618.5	protein_coding	-
chr10_39730950_39731783	chr10	39730950	39731783	ENSMUSG00000075241.1	Gm8055	ENSMUST00000099956.1	protein_coding	+
chr10_39743319_39745691	chr10	39743319	39745691	ENSMUSG00000038522.4	AI317395	ENSMUST00000163705.1	protein_coding	-
chr10_39743319_39745691	chr10	39743319	39745691	ENSMUSG00000038522.4	AI317395	ENSMUST00000045447.3	protein_coding	-
chr10_39829315_39829594	chr10	39829315	39829594	ENSMUSG00000077200.1	SNORA17	ENSMUST00000104012.1	snoRNA	+
chr10_39860451_39862552	chr10	39860451	39862552	ENSMUSG00000019838.9	Slc16a10	ENSMUST00000045307.5	protein_coding	-
chr10_39860451_39862552	chr10	39860451	39862552	ENSMUSG00000019838.9	Slc16a10	ENSMUST00000092566.6	protein_coding	-
chr10_39966207_39967527	chr10	39966207	39967527	ENSMUSG00000038510.5	Rpf2	ENSMUST00000045114.5	protein_coding	-
chr10_40021840_40022815	chr10	40021840	40022815	ENSMUSG00000075232.3	Amd1	ENSMUST00000099945.3	protein_coding	-
chr10_40068117_40070056	chr10	40068117	40070056	ENSMUSG00000038481.6	Cdk19	ENSMUST00000044672.4	protein_coding	+
chr10_40068117_40070056	chr10	40068117	40070056	ENSMUSG00000038481.6	Cdk19	ENSMUST00000095743.2	protein_coding	+
chr10_40068117_40070056	chr10	40068117	40070056	ENSMUSG00000038491.8	4930520K10Rik	ENSMUST00000044774.7	antisense	-
chr10_40068117_40070056	chr10	40068117	40070056	ENSMUSG00000038491.8	4930520K10Rik	ENSMUST00000143103.1	antisense	-
chr10_40289976_40290176	chr10	40289976	40290176	ENSMUSG00000019834.9	Slc22a16	ENSMUST00000078314.7	protein_coding	+
chr10_40348983_40351327	chr10	40348983	40351327	ENSMUSG00000063428.6	Ddo	ENSMUST00000019977.7	protein_coding	+
chr10_40348983_40351327	chr10	40348983	40351327	ENSMUSG00000063428.6	Ddo	ENSMUST00000044351.5	protein_coding	+
chr10_40348983_40351327	chr10	40348983	40351327	ENSMUSG00000063428.6	Ddo	ENSMUST00000099942.3	protein_coding	+
chr10_40348983_40351327	chr10	40348983	40351327	ENSMUSG00000063428.6	Ddo	ENSMUST00000019976.7	protein_coding	+
chr10_40401728_40404574	chr10	40401728	40404574	ENSMUSG00000045555.3	9030224M15Rik	ENSMUST00000058747.3	protein_coding	+
chr10_40595323_40595544	chr10	40595323	40595544	ENSMUSG00000089186.1	7SK	ENSMUST00000158561.1	misc_RNA	-
chr10_40602184_40603836	chr10	40602184	40603836	ENSMUSG00000019831.8	Wasf1	ENSMUST00000019975.7	protein_coding	+
chr10_40602184_40603836	chr10	40602184	40603836	ENSMUSG00000019831.8	Wasf1	ENSMUST00000105509.1	protein_coding	+
chr10_40602184_40603836	chr10	40602184	40603836	ENSMUSG00000038446.6	Cdc40	ENSMUST00000044166.6	protein_coding	-
chr10_40602184_40603836	chr10	40602184	40603836	ENSMUSG00000038446.6	Cdc40	ENSMUST00000165426.1	protein_coding	-
chr10_40790567_40792649	chr10	40790567	40792649	ENSMUSG00000046922.6	Gpr6	ENSMUST00000061796.6	protein_coding	-
chr10_41022385_41024190	chr10	41022385	41024190	ENSMUSG00000038417.3	Fig4	ENSMUST00000043814.3	protein_coding	-
chr10_41035732_41035955	chr10	41035732	41035955	ENSMUSG00000091415.2	Akd1	ENSMUST00000173517.1	protein_coding	+
chr10_41169175_41171820	chr10	41169175	41171820	ENSMUSG00000019826.9	Zbtb24	ENSMUST00000080771.7	protein_coding	+
chr10_41169175_41171820	chr10	41169175	41171820	ENSMUSG00000019826.9	Zbtb24	ENSMUST00000105508.3	protein_coding	+
chr10_41195811_41196622	chr10	41195811	41196622	ENSMUSG00000019823.11	Mical1	ENSMUST00000119962.1	protein_coding	+
chr10_41195811_41196622	chr10	41195811	41196622	ENSMUSG00000019823.11	Mical1	ENSMUST00000019967.9	protein_coding	+
chr10_41195811_41196622	chr10	41195811	41196622	ENSMUSG00000019823.11	Mical1	ENSMUST00000134010.1	retained_intron	+
chr10_41195811_41196622	chr10	41195811	41196622	ENSMUSG00000019823.11	Mical1	ENSMUST00000099934.4	protein_coding	+
chr10_41195811_41196622	chr10	41195811	41196622	ENSMUSG00000019823.11	Mical1	ENSMUST00000126436.1	nonsense_mediated_decay	+
chr10_41196719_41198240	chr10	41196719	41198240	ENSMUSG00000019823.11	Mical1	ENSMUST00000151486.1	protein_coding	+
chr10_41196719_41198240	chr10	41196719	41198240	ENSMUSG00000019823.11	Mical1	ENSMUST00000130838.1	retained_intron	+
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000078451.3	Ppil6	ENSMUST00000105507.3	protein_coding	+
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000078451.3	Ppil6	ENSMUST00000166698.1	protein_coding	+
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000147738.1	retained_intron	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000132170.1	retained_intron	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000147367.1	retained_intron	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000155411.1	nonsense_mediated_decay	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000141542.1	retained_intron	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000143470.1	retained_intron	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000019965.6	protein_coding	-
chr10_41208825_41210861	chr10	41208825	41210861	ENSMUSG00000019822.6	Smpd2	ENSMUST00000126833.1	retained_intron	-
chr10_41238262_41240216	chr10	41238262	41240216	ENSMUSG00000019818.8	Cd164	ENSMUST00000019962.8	protein_coding	+
chr10_41238262_41240216	chr10	41238262	41240216	ENSMUSG00000019818.8	Cd164	ENSMUST00000165564.1	protein_coding	+
chr10_41271941_41274265	chr10	41271941	41274265	ENSMUSG00000090708.1	Gm17196	ENSMUST00000164074.1	antisense	+
chr10_41271941_41274265	chr10	41271941	41274265	ENSMUSG00000075225.4	Ccdc162	ENSMUST00000159868.1	retained_intron	-
chr10_41271941_41274265	chr10	41271941	41274265	ENSMUSG00000075225.4	Ccdc162	ENSMUST00000159978.1	processed_transcript	-
chr10_41295272_41296776	chr10	41295272	41296776	ENSMUSG00000091370.1	5730435O14Rik	ENSMUST00000165647.1	retained_intron	+
chr10_41298313_41298933	chr10	41298313	41298933	ENSMUSG00000075225.4	Ccdc162	ENSMUST00000095227.3	protein_coding	-
chr10_41307075_41307440	chr10	41307075	41307440	ENSMUSG00000075225.4	Ccdc162	ENSMUST00000160751.1	protein_coding	-
chr10_41428943_41429732	chr10	41428943	41429732	ENSMUSG00000075225.4	Ccdc162	ENSMUST00000019955.8	protein_coding	-
chr10_41428943_41429732	chr10	41428943	41429732	ENSMUSG00000075225.4	Ccdc162	ENSMUST00000099932.3	protein_coding	-
chr10_41528986_41531193	chr10	41528986	41531193	ENSMUSG00000038332.6	Sesn1	ENSMUST00000099931.3	protein_coding	+
chr10_41528986_41531193	chr10	41528986	41531193	ENSMUSG00000019813.8	Cep57l1	ENSMUST00000171049.1	protein_coding	-
chr10_41528986_41531193	chr10	41528986	41531193	ENSMUSG00000019813.8	Cep57l1	ENSMUST00000105505.2	protein_coding	-
chr10_41528986_41531193	chr10	41528986	41531193	ENSMUSG00000019813.8	Cep57l1	ENSMUST00000105504.2	protein_coding	-
chr10_41606354_41607934	chr10	41606354	41607934	ENSMUSG00000038332.6	Sesn1	ENSMUST00000041438.6	protein_coding	+
chr10_41737605_41738950	chr10	41737605	41738950	ENSMUSG00000071324.5	Armc2	ENSMUST00000161081.1	protein_coding	-
chr10_41737605_41738950	chr10	41737605	41738950	ENSMUSG00000071324.5	Armc2	ENSMUST00000162405.1	protein_coding	-
chr10_41737605_41738950	chr10	41737605	41738950	ENSMUSG00000071324.5	Armc2	ENSMUST00000161927.1	nonsense_mediated_decay	-
chr10_41737605_41738950	chr10	41737605	41738950	ENSMUSG00000071324.5	Armc2	ENSMUST00000095729.4	protein_coding	-
chr10_41737605_41738950	chr10	41737605	41738950	ENSMUSG00000071324.5	Armc2	ENSMUST00000160262.2	protein_coding	-
chr10_41775115_41776068	chr10	41775115	41776068	ENSMUSG00000085666.1	Gm9855	ENSMUST00000121229.1	transcribed_processed_pseudogene	-
chr10_41775115_41776068	chr10	41775115	41776068	ENSMUSG00000085666.1	Gm9855	ENSMUST00000061897.4	retrotransposed	-
chr10_41996032_41998386	chr10	41996032	41998386	ENSMUSG00000048756.4	Foxo3	ENSMUST00000105501.1	protein_coding	-
chr10_41996032_41998386	chr10	41996032	41998386	ENSMUSG00000048756.4	Foxo3	ENSMUST00000056974.3	protein_coding	-
chr10_41996032_41998386	chr10	41996032	41998386	ENSMUSG00000048756.4	Foxo3	ENSMUST00000105502.1	protein_coding	-
chr10_42197379_42199288	chr10	42197379	42199288	ENSMUSG00000038302.8	Lace1	ENSMUST00000133326.1	nonsense_mediated_decay	-
chr10_42197379_42199288	chr10	42197379	42199288	ENSMUSG00000038302.8	Lace1	ENSMUST00000041024.8	protein_coding	-
chr10_42197379_42199288	chr10	42197379	42199288	ENSMUSG00000038302.8	Lace1	ENSMUST00000151747.1	protein_coding	-
chr10_42212948_42213428	chr10	42212948	42213428	ENSMUSG00000087891.1	7SK	ENSMUST00000157266.1	misc_RNA	-
chr10_42221069_42223030	chr10	42221069	42223030	ENSMUSG00000019804.6	Snx3	ENSMUST00000105500.1	protein_coding	+
chr10_42221069_42223030	chr10	42221069	42223030	ENSMUSG00000019804.6	Snx3	ENSMUST00000019939.5	protein_coding	+
chr10_42221069_42223030	chr10	42221069	42223030	ENSMUSG00000019804.6	Snx3	ENSMUST00000105499.1	protein_coding	+
chr10_42302540_42303722	chr10	42302540	42303722	ENSMUSG00000019803.5	Nr2e1	ENSMUST00000019938.4	protein_coding	-
chr10_42302540_42303722	chr10	42302540	42303722	ENSMUSG00000038280.6	Ostm1	ENSMUST00000147899.1	processed_transcript	+
chr10_42302540_42303722	chr10	42302540	42303722	ENSMUSG00000038280.6	Ostm1	ENSMUST00000105497.1	protein_coding	+
chr10_42302540_42303722	chr10	42302540	42303722	ENSMUSG00000038280.6	Ostm1	ENSMUST00000144806.1	protein_coding	+
chr10_42398125_42399801	chr10	42398125	42399801	ENSMUSG00000038280.6	Ostm1	ENSMUST00000040718.5	protein_coding	+
chr10_42398125_42399801	chr10	42398125	42399801	ENSMUSG00000038280.6	Ostm1	ENSMUST00000154048.1	retained_intron	+
chr10_42418005_42419296	chr10	42418005	42419296	ENSMUSG00000086434.1	Gm15200	ENSMUST00000149950.1	antisense	-
chr10_42449551_42449760	chr10	42449551	42449760	ENSMUSG00000087888.1	U7	ENSMUST00000157263.1	snRNA	-
chr10_42480798_42482819	chr10	42480798	42482819	ENSMUSG00000019802.6	Sec63	ENSMUST00000019937.4	protein_coding	+
chr10_42480798_42482819	chr10	42480798	42482819	ENSMUSG00000019802.6	Sec63	ENSMUST00000155410.1	retained_intron	+
chr10_42480798_42482819	chr10	42480798	42482819	ENSMUSG00000019802.6	Sec63	ENSMUST00000144228.1	retained_intron	+
chr10_42483134_42483359	chr10	42483134	42483359	ENSMUSG00000091810.1	Gm17442	ENSMUST00000170410.1	lincRNA	-
chr10_42520848_42521235	chr10	42520848	42521235	ENSMUSG00000019802.6	Sec63	ENSMUST00000167329.1	protein_coding	+
chr10_42537502_42537702	chr10	42537502	42537702	ENSMUSG00000019802.6	Sec63	ENSMUST00000124613.1	processed_transcript	+
chr10_42537502_42537702	chr10	42537502	42537702	ENSMUSG00000019802.6	Sec63	ENSMUST00000105496.1	processed_transcript	+
chr10_42579767_42580842	chr10	42579767	42580842	ENSMUSG00000044770.8	Scml4	ENSMUST00000063063.7	protein_coding	+
chr10_42579767_42580842	chr10	42579767	42580842	ENSMUSG00000044770.8	Scml4	ENSMUST00000157071.1	protein_coding	+
chr10_42579767_42580842	chr10	42579767	42580842	ENSMUSG00000044770.8	Scml4	ENSMUST00000105495.1	protein_coding	+
chr10_42579767_42580842	chr10	42579767	42580842	ENSMUSG00000044770.8	Scml4	ENSMUST00000105494.1	protein_coding	+
chr10_42622070_42622365	chr10	42622070	42622365	ENSMUSG00000044770.8	Scml4	ENSMUST00000125576.1	protein_coding	+
chr10_42654211_42654916	chr10	42654211	42654916	ENSMUSG00000044770.8	Scml4	ENSMUST00000130511.1	retained_intron	+
chr10_42654211_42654916	chr10	42654211	42654916	ENSMUSG00000044770.8	Scml4	ENSMUST00000153091.1	retained_intron	+
chr10_42659502_42659863	chr10	42659502	42659863	ENSMUSG00000044770.8	Scml4	ENSMUST00000127675.1	processed_transcript	+
chr10_42892853_42895594	chr10	42892853	42895594	ENSMUSG00000045008.1	9030612E09Rik	ENSMUST00000053792.1	protein_coding	+
chr10_42892853_42895594	chr10	42892853	42895594	ENSMUSG00000038248.7	Sobp	ENSMUST00000040275.7	protein_coding	-
chr10_42940212_42941982	chr10	42940212	42941982	ENSMUSG00000038240.7	Pdss2	ENSMUST00000095725.4	protein_coding	+
chr10_42940212_42941982	chr10	42940212	42941982	ENSMUSG00000038240.7	Pdss2	ENSMUST00000160823.1	nonsense_mediated_decay	+
chr10_42940212_42941982	chr10	42940212	42941982	ENSMUSG00000038240.7	Pdss2	ENSMUST00000160108.1	retained_intron	+
chr10_42940212_42941982	chr10	42940212	42941982	ENSMUSG00000038240.7	Pdss2	ENSMUST00000159139.1	protein_coding	+
chr10_42940212_42941982	chr10	42940212	42941982	ENSMUSG00000038240.7	Pdss2	ENSMUST00000162758.1	retained_intron	+
chr10_43197268_43200294	chr10	43197268	43200294	ENSMUSG00000038214.8	Bend3	ENSMUST00000167488.1	protein_coding	+
chr10_43197268_43200294	chr10	43197268	43200294	ENSMUSG00000038214.8	Bend3	ENSMUST00000040147.7	protein_coding	+
chr10_43259655_43261071	chr10	43259655	43261071	ENSMUSG00000019797.4	1700021F05Rik	ENSMUST00000126463.1	processed_transcript	-
chr10_43259655_43261071	chr10	43259655	43261071	ENSMUSG00000019797.4	1700021F05Rik	ENSMUST00000147196.1	protein_coding	-
chr10_43259655_43261071	chr10	43259655	43261071	ENSMUSG00000019797.4	1700021F05Rik	ENSMUST00000019932.3	protein_coding	-
chr10_43298047_43300096	chr10	43298047	43300096	ENSMUSG00000047139.8	Cd24a	ENSMUST00000058714.8	protein_coding	+
chr10_43313018_43313308	chr10	43313018	43313308	ENSMUSG00000075184.2	F930017D23Rik	ENSMUST00000099888.2	protein_coding	+
chr10_43620774_43622290	chr10	43620774	43622290	ENSMUSG00000019864.7	Rtn4ip1	ENSMUST00000054418.5	protein_coding	+
chr10_43620774_43622290	chr10	43620774	43622290	ENSMUSG00000019863.6	Qrsl1	ENSMUST00000154405.1	retained_intron	-
chr10_43620774_43622290	chr10	43620774	43622290	ENSMUSG00000019863.6	Qrsl1	ENSMUST00000020012.6	protein_coding	-
chr10_43722974_43724511	chr10	43722974	43724511	ENSMUSG00000075162.3	Gm10812	ENSMUST00000099864.3	pseudogene	+
chr10_43722974_43724511	chr10	43722974	43724511	ENSMUSG00000019866.8	Aim1	ENSMUST00000020017.8	protein_coding	-
chr10_43931049_43931475	chr10	43931049	43931475	ENSMUSG00000091358.1	Speer5-ps1	ENSMUST00000169525.1	transcribed_unprocessed_pseudogene	+
chr10_43987329_43988711	chr10	43987329	43988711	ENSMUSG00000038160.5	Atg5	ENSMUST00000039286.4	protein_coding	+
chr10_44177599_44179362	chr10	44177599	44179362	ENSMUSG00000038151.6	Prdm1	ENSMUST00000105490.2	protein_coding	-
chr10_44177599_44179362	chr10	44177599	44179362	ENSMUSG00000038151.6	Prdm1	ENSMUST00000039174.4	protein_coding	-
chr10_44247601_44248160	chr10	44247601	44248160	ENSMUSG00000038151.6	Prdm1	ENSMUST00000167340.1	processed_transcript	-
chr10_44786056_44787816	chr10	44786056	44787816	ENSMUSG00000019849.9	Prep	ENSMUST00000099858.2	protein_coding	+
chr10_44786056_44787816	chr10	44786056	44787816	ENSMUSG00000019849.9	Prep	ENSMUST00000166208.1	protein_coding	+
chr10_45008837_45009950	chr10	45008837	45009950	ENSMUSG00000019848.7	Popdc3	ENSMUST00000019994.6	protein_coding	+
chr10_45008837_45009950	chr10	45008837	45009950	ENSMUSG00000019848.7	Popdc3	ENSMUST00000161803.1	protein_coding	+
chr10_45008837_45009950	chr10	45008837	45009950	ENSMUSG00000090088.1	Gm15934	ENSMUST00000162062.1	antisense	-
chr10_45054729_45056722	chr10	45054729	45056722	ENSMUSG00000071317.3	Bves	ENSMUST00000095715.3	protein_coding	+
chr10_45188843_45190018	chr10	45188843	45190018	ENSMUSG00000063804.6	Lin28b	ENSMUST00000079390.6	protein_coding	-
chr10_45188843_45190018	chr10	45188843	45190018	ENSMUSG00000063804.6	Lin28b	ENSMUST00000105489.2	protein_coding	-
chr10_45190177_45190412	chr10	45190177	45190412	ENSMUSG00000063804.6	Lin28b	ENSMUST00000079390.6	protein_coding	-
chr10_45190177_45190412	chr10	45190177	45190412	ENSMUSG00000063804.6	Lin28b	ENSMUST00000105489.2	protein_coding	-
chr10_45205080_45207038	chr10	45205080	45207038	ENSMUSG00000063804.6	Lin28b	ENSMUST00000099847.1	protein_coding	-
chr10_45205080_45207038	chr10	45205080	45207038	ENSMUSG00000063804.6	Lin28b	ENSMUST00000099849.2	protein_coding	-
chr10_45297094_45298733	chr10	45297094	45298733	ENSMUSG00000038822.8	Hace1	ENSMUST00000037044.6	protein_coding	+
chr10_45297094_45298733	chr10	45297094	45298733	ENSMUSG00000038822.8	Hace1	ENSMUST00000059925.5	protein_coding	+
chr10_45297094_45298733	chr10	45297094	45298733	ENSMUSG00000038822.8	Hace1	ENSMUST00000131568.1	protein_coding	+
chr10_45297094_45298733	chr10	45297094	45298733	ENSMUSG00000038822.8	Hace1	ENSMUST00000136905.1	processed_transcript	+
chr10_45395973_45397174	chr10	45395973	45397174	ENSMUSG00000038822.8	Hace1	ENSMUST00000155368.1	retained_intron	+
chr10_49502415_49503647	chr10	49502415	49503647	ENSMUSG00000056073.7	Grik2	ENSMUST00000095710.1	protein_coding	-
chr10_49502415_49503647	chr10	49502415	49503647	ENSMUSG00000056073.7	Grik2	ENSMUST00000079751.2	protein_coding	-
chr10_49502415_49503647	chr10	49502415	49503647	ENSMUSG00000056073.7	Grik2	ENSMUST00000078692.4	protein_coding	-
chr10_49502415_49503647	chr10	49502415	49503647	ENSMUSG00000056073.7	Grik2	ENSMUST00000105485.1	protein_coding	-
chr10_49502415_49503647	chr10	49502415	49503647	ENSMUSG00000056073.7	Grik2	ENSMUST00000105486.1	protein_coding	-
chr10_49507969_49509142	chr10	49507969	49509142	ENSMUSG00000056073.7	Grik2	ENSMUST00000105483.1	protein_coding	-
chr10_49507969_49509142	chr10	49507969	49509142	ENSMUSG00000056073.7	Grik2	ENSMUST00000105487.1	protein_coding	-
chr10_50311451_50313251	chr10	50311451	50313251	ENSMUSG00000038774.8	Ascc3	ENSMUST00000035606.8	protein_coding	+
chr10_50613967_50615356	chr10	50613967	50615356	ENSMUSG00000019913.3	Sim1	ENSMUST00000020071.3	protein_coding	+
chr10_51199989_51201601	chr10	51199989	51201601	ENSMUSG00000089672.2	Gp49a	ENSMUST00000102894.3	protein_coding	+
chr10_51199989_51201601	chr10	51199989	51201601	ENSMUSG00000062593.8	Lilrb4	ENSMUST00000105481.1	protein_coding	+
chr10_51199989_51201601	chr10	51199989	51201601	ENSMUSG00000062593.8	Lilrb4	ENSMUST00000105482.1	protein_coding	+
chr10_51199989_51201601	chr10	51199989	51201601	ENSMUSG00000089672.2	Gp49a	ENSMUST00000020067.7	protein_coding	+
chr10_51199989_51201601	chr10	51199989	51201601	ENSMUSG00000089672.2	Gp49a	ENSMUST00000139982.1	nonsense_mediated_decay	+
chr10_51199989_51201601	chr10	51199989	51201601	ENSMUSG00000089672.2	Gp49a	ENSMUST00000049800.7	protein_coding	+
chr10_51210276_51211652	chr10	51210276	51211652	ENSMUSG00000062593.8	Lilrb4	ENSMUST00000078778.3	protein_coding	+
chr10_51210276_51211652	chr10	51210276	51211652	ENSMUSG00000062593.8	Lilrb4	ENSMUST00000105479.1	protein_coding	+
chr10_51397241_51398402	chr10	51397241	51398402	ENSMUSG00000019900.10	Rfx6	ENSMUST00000125729.1	retained_intron	+
chr10_51397241_51398402	chr10	51397241	51398402	ENSMUSG00000019900.10	Rfx6	ENSMUST00000122922.1	protein_coding	+
chr10_51397241_51398402	chr10	51397241	51398402	ENSMUSG00000019900.10	Rfx6	ENSMUST00000020054.8	protein_coding	+
chr10_51476817_51477182	chr10	51476817	51477182	ENSMUSG00000062224.4	4933411G06Rik	ENSMUST00000075909.4	protein_coding	-
chr10_51742172_51743483	chr10	51742172	51743483	ENSMUSG00000049641.5	Vgll2	ENSMUST00000163017.1	protein_coding	+
chr10_51742172_51743483	chr10	51742172	51743483	ENSMUSG00000049641.5	Vgll2	ENSMUST00000058347.4	protein_coding	+
chr10_51742172_51743483	chr10	51742172	51743483	ENSMUSG00000049641.5	Vgll2	ENSMUST00000168661.1	protein_coding	+
chr10_51915007_51915559	chr10	51915007	51915559	ENSMUSG00000019893.4	Ros1	ENSMUST00000020045.3	protein_coding	-
chr10_51915007_51915559	chr10	51915007	51915559	ENSMUSG00000019893.4	Ros1	ENSMUST00000117992.1	protein_coding	-
chr10_51951853_51954492	chr10	51951853	51954492	ENSMUSG00000019891.7	Dcbld1	ENSMUST00000069004.5	protein_coding	+
chr10_51951853_51954492	chr10	51951853	51954492	ENSMUSG00000019891.7	Dcbld1	ENSMUST00000140921.1	retained_intron	+
chr10_51951853_51954492	chr10	51951853	51954492	ENSMUSG00000019891.7	Dcbld1	ENSMUST00000105476.2	protein_coding	+
chr10_52100882_52103213	chr10	52100882	52103213	ENSMUSG00000019861.7	Gopc	ENSMUST00000105475.1	protein_coding	-
chr10_52100882_52103213	chr10	52100882	52103213	ENSMUSG00000019861.7	Gopc	ENSMUST00000020008.7	protein_coding	-
chr10_52108572_52109629	chr10	52108572	52109629	ENSMUSG00000038624.10	Nepn	ENSMUST00000160539.1	protein_coding	+
chr10_52136680_52138670	chr10	52136680	52138670	ENSMUSG00000023068.8	Nus1	ENSMUST00000023830.8	protein_coding	+
chr10_52148577_52148887	chr10	52148577	52148887	ENSMUSG00000023068.8	Nus1	ENSMUST00000161678.1	protein_coding	+
chr10_52265412_52265618	chr10	52265412	52265618	ENSMUSG00000049576.4	Zfa	ENSMUST00000055516.4	protein_coding	-
chr10_52409899_52411869	chr10	52409899	52411869	ENSMUSG00000038602.7	Slc35f1	ENSMUST00000105473.2	protein_coding	+
chr10_53057017_53057624	chr10	53057017	53057624	ENSMUSG00000038583.6	Pln	ENSMUST00000163319.1	protein_coding	+
chr10_53057017_53057624	chr10	53057017	53057624	ENSMUSG00000038583.6	Pln	ENSMUST00000046221.6	protein_coding	+
chr10_53060773_53061661	chr10	53060773	53061661	ENSMUSG00000078447.1	Gm10942	ENSMUST00000105471.1	protein_coding	-
chr10_53067730_53069096	chr10	53067730	53069096	ENSMUSG00000038594.7	Gm9766	ENSMUST00000095691.4	protein_coding	-
chr10_53315564_53317808	chr10	53315564	53317808	ENSMUSG00000019857.6	Asf1a	ENSMUST00000020004.6	protein_coding	+
chr10_53348929_53350376	chr10	53348929	53350376	ENSMUSG00000058298.6	Mcm9	ENSMUST00000075540.5	protein_coding	-
chr10_53414543_53414939	chr10	53414543	53414939	ENSMUSG00000019856.7	Fam184a	ENSMUST00000171807.1	protein_coding	-
chr10_53469751_53471819	chr10	53469751	53471819	ENSMUSG00000019856.7	Fam184a	ENSMUST00000170839.1	retained_intron	-
chr10_53469751_53471819	chr10	53469751	53471819	ENSMUSG00000019856.7	Fam184a	ENSMUST00000020003.7	protein_coding	-
chr10_53792748_53796539	chr10	53792748	53796539	ENSMUSG00000084765.1	Gm16998	ENSMUST00000136349.1	lincRNA	+
chr10_53792748_53796539	chr10	53792748	53796539	ENSMUSG00000003746.9	Man1a	ENSMUST00000133330.1	retained_intron	-
chr10_53792748_53796539	chr10	53792748	53796539	ENSMUSG00000003746.9	Man1a	ENSMUST00000105469.1	protein_coding	-
chr10_53792748_53796539	chr10	53792748	53796539	ENSMUSG00000003746.9	Man1a	ENSMUST00000146483.1	retained_intron	-
chr10_53792748_53796539	chr10	53792748	53796539	ENSMUSG00000003746.9	Man1a	ENSMUST00000105470.1	protein_coding	-
chr10_53792748_53796539	chr10	53792748	53796539	ENSMUSG00000003746.9	Man1a	ENSMUST00000003843.8	protein_coding	-
chr10_54432404_54433148	chr10	54432404	54433148	ENSMUSG00000088987.1	U7	ENSMUST00000158362.1	snRNA	-
chr10_55825923_55827454	chr10	55825923	55827454	ENSMUSG00000047669.7	Msl3l2	ENSMUST00000063138.7	protein_coding	+
chr10_55947781_55949428	chr10	55947781	55949428	ENSMUSG00000038122.8	D630037F22Rik	ENSMUST00000099739.3	protein_coding	-
chr10_56096863_56099409	chr10	56096863	56099409	ENSMUSG00000050953.8	Gja1	ENSMUST00000068581.7	protein_coding	+
chr10_56106933_56107199	chr10	56106933	56107199	ENSMUSG00000050953.8	Gja1	ENSMUST00000163792.1	protein_coding	+
chr10_56107277_56108208	chr10	56107277	56108208	ENSMUSG00000050953.8	Gja1	ENSMUST00000163792.1	protein_coding	+
chr10_57205460_57207371	chr10	57205460	57207371	ENSMUSG00000019878.6	Hsf2	ENSMUST00000081139.2	protein_coding	+
chr10_57205460_57207371	chr10	57205460	57207371	ENSMUSG00000019878.6	Hsf2	ENSMUST00000079833.4	protein_coding	+
chr10_57205460_57207371	chr10	57205460	57207371	ENSMUSG00000085621.1	4930467K11Rik	ENSMUST00000150743.1	lincRNA	-
chr10_57250908_57252839	chr10	57250908	57252839	ENSMUSG00000019877.4	Serinc1	ENSMUST00000164400.1	retained_intron	-
chr10_57250908_57252839	chr10	57250908	57252839	ENSMUSG00000019877.4	Serinc1	ENSMUST00000166997.1	retained_intron	-
chr10_57250908_57252839	chr10	57250908	57252839	ENSMUSG00000019877.4	Serinc1	ENSMUST00000170062.1	nonsense_mediated_decay	-
chr10_57250908_57252839	chr10	57250908	57252839	ENSMUSG00000019877.4	Serinc1	ENSMUST00000169122.1	protein_coding	-
chr10_57250908_57252839	chr10	57250908	57252839	ENSMUSG00000019877.4	Serinc1	ENSMUST00000020027.4	protein_coding	-
chr10_57351352_57353064	chr10	57351352	57353064	ENSMUSG00000019876.7	Pkib	ENSMUST00000075992.4	protein_coding	+
chr10_57351352_57353064	chr10	57351352	57353064	ENSMUSG00000019876.7	Pkib	ENSMUST00000165038.1	protein_coding	+
chr10_57365485_57365685	chr10	57365485	57365685	ENSMUSG00000019876.7	Pkib	ENSMUST00000095668.2	protein_coding	+
chr10_57370674_57370874	chr10	57370674	57370874	ENSMUSG00000019876.7	Pkib	ENSMUST00000066028.5	protein_coding	+
chr10_57503073_57505574	chr10	57503073	57505574	ENSMUSG00000019874.5	Fabp7	ENSMUST00000020024.5	protein_coding	+
chr10_57503073_57505574	chr10	57503073	57505574	ENSMUSG00000019874.5	Fabp7	ENSMUST00000165013.1	protein_coding	+
chr10_57513839_57516334	chr10	57513839	57516334	ENSMUSG00000019872.7	Smpdl3a	ENSMUST00000151623.1	protein_coding	+
chr10_57513839_57516334	chr10	57513839	57516334	ENSMUSG00000019872.7	Smpdl3a	ENSMUST00000020022.7	protein_coding	+
chr10_57513839_57516334	chr10	57513839	57516334	ENSMUSG00000019872.7	Smpdl3a	ENSMUST00000125076.1	processed_transcript	+
chr10_57717421_57719068	chr10	57717421	57719068	ENSMUSG00000038039.7	Gcc2	ENSMUST00000057659.7	protein_coding	+
chr10_57717421_57719068	chr10	57717421	57719068	ENSMUSG00000038039.7	Gcc2	ENSMUST00000162984.1	nonsense_mediated_decay	+
chr10_57717421_57719068	chr10	57717421	57719068	ENSMUSG00000038039.7	Gcc2	ENSMUST00000162041.1	protein_coding	+
chr10_57717421_57719068	chr10	57717421	57719068	ENSMUSG00000038039.7	Gcc2	ENSMUST00000162860.1	protein_coding	+
chr10_57717421_57719068	chr10	57717421	57719068	ENSMUSG00000038039.7	Gcc2	ENSMUST00000160427.1	protein_coding	+
chr10_57717421_57719068	chr10	57717421	57719068	ENSMUSG00000038039.7	Gcc2	ENSMUST00000161570.1	processed_transcript	+
chr10_57785480_57786955	chr10	57785480	57786955	ENSMUSG00000019920.10	Lims1	ENSMUST00000020078.7	protein_coding	+
chr10_57814160_57815008	chr10	57814160	57815008	ENSMUSG00000019920.10	Lims1	ENSMUST00000171162.1	protein_coding	+
chr10_57833982_57834938	chr10	57833982	57834938	ENSMUSG00000019920.10	Lims1	ENSMUST00000171062.1	protein_coding	+
chr10_57854932_57857580	chr10	57854932	57857580	ENSMUSG00000019920.10	Lims1	ENSMUST00000020077.4	protein_coding	+
chr10_57854932_57857580	chr10	57854932	57857580	ENSMUSG00000019920.10	Lims1	ENSMUST00000105468.1	protein_coding	+
chr10_57879292_57879817	chr10	57879292	57879817	ENSMUSG00000019920.10	Lims1	ENSMUST00000148799.1	processed_transcript	+
chr10_57908423_57910436	chr10	57908423	57910436	ENSMUSG00000003226.6	Ranbp2	ENSMUST00000003310.5	protein_coding	+
chr10_57960074_57961689	chr10	57960074	57961689	ENSMUSG00000038010.8	Ccdc138	ENSMUST00000036576.8	protein_coding	+
chr10_58137755_58138868	chr10	58137755	58138868	ENSMUSG00000003227.4	Edar	ENSMUST00000003312.4	protein_coding	-
chr10_58274842_58277173	chr10	58274842	58277173	ENSMUSG00000037990.10	Sh3rf3	ENSMUST00000135526.1	protein_coding	+
chr10_58274842_58277173	chr10	58274842	58277173	ENSMUSG00000037990.10	Sh3rf3	ENSMUST00000099724.3	protein_coding	+
chr10_58274842_58277173	chr10	58274842	58277173	ENSMUSG00000037990.10	Sh3rf3	ENSMUST00000153031.1	protein_coding	+
chr10_58274842_58277173	chr10	58274842	58277173	ENSMUSG00000037990.10	Sh3rf3	ENSMUST00000133151.1	retained_intron	+
chr10_58274842_58277173	chr10	58274842	58277173	ENSMUSG00000055958.3	Gm9987	ENSMUST00000069768.3	pseudogene	-
chr10_58528246_58528454	chr10	58528246	58528454	ENSMUSG00000037990.10	Sh3rf3	ENSMUST00000148267.1	processed_transcript	+
chr10_58542556_58542766	chr10	58542556	58542766	ENSMUSG00000037990.10	Sh3rf3	ENSMUST00000152924.1	processed_transcript	+
chr10_58683620_58686037	chr10	58683620	58686037	ENSMUSG00000071286.4	Ankrd57	ENSMUST00000095658.3	pseudogene	+
chr10_58683620_58686037	chr10	58683620	58686037	ENSMUSG00000019917.8	Sept10	ENSMUST00000165971.1	protein_coding	-
chr10_58785423_58787382	chr10	58785423	58787382	ENSMUSG00000019916.8	P4ha1	ENSMUST00000009789.8	protein_coding	+
chr10_58785423_58787382	chr10	58785423	58787382	ENSMUSG00000019916.8	P4ha1	ENSMUST00000092512.4	protein_coding	+
chr10_58785423_58787382	chr10	58785423	58787382	ENSMUSG00000019916.8	P4ha1	ENSMUST00000105466.2	protein_coding	+
chr10_58865515_58867421	chr10	58865515	58867421	ENSMUSG00000009646.7	Pla2g12b	ENSMUST00000009790.7	protein_coding	+
chr10_58893567_58894043	chr10	58893567	58894043	ENSMUSG00000009654.4	Oit3	ENSMUST00000162493.1	retained_intron	-
chr10_58904502_58904868	chr10	58904502	58904868	ENSMUSG00000009654.4	Oit3	ENSMUST00000009798.4	protein_coding	-
chr10_59077361_59080056	chr10	59077361	59080056	ENSMUSG00000071280.1	Gm10322	ENSMUST00000095646.1	protein_coding	+
chr10_59077361_59080056	chr10	59077361	59080056	ENSMUSG00000009647.7	Ccdc109a	ENSMUST00000162012.1	processed_transcript	-
chr10_59077361_59080056	chr10	59077361	59080056	ENSMUSG00000009647.7	Ccdc109a	ENSMUST00000161168.1	processed_transcript	-
chr10_59077361_59080056	chr10	59077361	59080056	ENSMUSG00000009647.7	Ccdc109a	ENSMUST00000161435.1	nonsense_mediated_decay	-
chr10_59077361_59080056	chr10	59077361	59080056	ENSMUSG00000009647.7	Ccdc109a	ENSMUST00000020312.6	protein_coding	-
chr10_59164592_59166048	chr10	59164592	59166048	ENSMUSG00000020111.8	Cbara1	ENSMUST00000165563.1	protein_coding	+
chr10_59164592_59166048	chr10	59164592	59166048	ENSMUSG00000020111.8	Cbara1	ENSMUST00000167872.1	retained_intron	+
chr10_59164592_59166048	chr10	59164592	59166048	ENSMUSG00000020111.8	Cbara1	ENSMUST00000020311.6	protein_coding	+
chr10_59164592_59166048	chr10	59164592	59166048	ENSMUSG00000020111.8	Cbara1	ENSMUST00000092508.5	protein_coding	+
chr10_59164592_59166048	chr10	59164592	59166048	ENSMUSG00000020111.8	Cbara1	ENSMUST00000171409.1	protein_coding	+
chr10_59164592_59166048	chr10	59164592	59166048	ENSMUSG00000020111.8	Cbara1	ENSMUST00000165405.1	retained_intron	+
chr10_59263039_59264105	chr10	59263039	59264105	ENSMUSG00000091184.1	Gm17059	ENSMUST00000168284.1	antisense	-
chr10_59280012_59281388	chr10	59280012	59281388	ENSMUSG00000077520.1	SNORA17	ENSMUST00000104332.1	snoRNA	-
chr10_59324015_59324238	chr10	59324015	59324238	ENSMUSG00000020111.8	Cbara1	ENSMUST00000166565.1	retained_intron	+
chr10_59341635_59343357	chr10	59341635	59343357	ENSMUSG00000020109.7	Dnajb12	ENSMUST00000147914.1	protein_coding	+
chr10_59341635_59343357	chr10	59341635	59343357	ENSMUSG00000020109.7	Dnajb12	ENSMUST00000131810.1	nonsense_mediated_decay	+
chr10_59341635_59343357	chr10	59341635	59343357	ENSMUSG00000020109.7	Dnajb12	ENSMUST00000146590.1	protein_coding	+
chr10_59341635_59343357	chr10	59341635	59343357	ENSMUSG00000020109.7	Dnajb12	ENSMUST00000142819.1	protein_coding	+
chr10_59341635_59343357	chr10	59341635	59343357	ENSMUSG00000020109.7	Dnajb12	ENSMUST00000020309.6	protein_coding	+
chr10_59568493_59571766	chr10	59568493	59571766	ENSMUSG00000058297.9	Spock2	ENSMUST00000138976.2	retained_intron	+
chr10_59568493_59571766	chr10	59568493	59571766	ENSMUSG00000058297.9	Spock2	ENSMUST00000121820.2	protein_coding	+
chr10_59568493_59571766	chr10	59568493	59571766	ENSMUSG00000058297.9	Spock2	ENSMUST00000165024.1	protein_coding	+
chr10_59656470_59656881	chr10	59656470	59656881	ENSMUSG00000057337.6	Chst3	ENSMUST00000167915.1	protein_coding	-
chr10_59681281_59682215	chr10	59681281	59682215	ENSMUSG00000057337.6	Chst3	ENSMUST00000135158.2	protein_coding	-
chr10_59681281_59682215	chr10	59681281	59682215	ENSMUSG00000057337.6	Chst3	ENSMUST00000163556.1	protein_coding	-
chr10_59740058_59741052	chr10	59740058	59741052	ENSMUSG00000004207.7	Psap	ENSMUST00000105465.1	protein_coding	+
chr10_59740058_59741052	chr10	59740058	59741052	ENSMUSG00000004207.7	Psap	ENSMUST00000004316.7	protein_coding	+
chr10_59746910_59749642	chr10	59746910	59749642	ENSMUSG00000004207.7	Psap	ENSMUST00000165878.1	protein_coding	+
chr10_59767471_59768714	chr10	59767471	59768714	ENSMUSG00000012819.8	Cdh23	ENSMUST00000156501.1	retained_intron	-
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000020301.7	protein_coding	+
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000105460.1	protein_coding	+
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000164027.1	processed_transcript	+
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000169621.1	processed_transcript	+
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000169139.1	retained_intron	+
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000170507.1	protein_coding	+
chr10_59808802_59810516	chr10	59808802	59810516	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000164749.1	protein_coding	+
chr10_59811736_59812126	chr10	59811736	59812126	ENSMUSG00000020101.7	4632428N05Rik	ENSMUST00000105459.1	protein_coding	+
chr10_59842786_59843504	chr10	59842786	59843504	ENSMUSG00000012819.8	Cdh23	ENSMUST00000124712.1	processed_transcript	-
chr10_59868236_59869211	chr10	59868236	59869211	ENSMUSG00000012819.8	Cdh23	ENSMUST00000144462.1	processed_transcript	-
chr10_60149505_60150907	chr10	60149505	60150907	ENSMUSG00000012819.8	Cdh23	ENSMUST00000123309.1	processed_transcript	-
chr10_60214798_60216253	chr10	60214798	60216253	ENSMUSG00000020100.9	Slc29a3	ENSMUST00000144989.1	processed_transcript	-
chr10_60214798_60216253	chr10	60214798	60216253	ENSMUSG00000020100.9	Slc29a3	ENSMUST00000150845.1	nonsense_mediated_decay	-
chr10_60214798_60216253	chr10	60214798	60216253	ENSMUSG00000020100.9	Slc29a3	ENSMUST00000119595.1	protein_coding	-
chr10_60214798_60216253	chr10	60214798	60216253	ENSMUSG00000020100.9	Slc29a3	ENSMUST00000117513.1	protein_coding	-
chr10_60293630_60294932	chr10	60293630	60294932	ENSMUSG00000020099.6	Unc5b	ENSMUST00000077925.5	protein_coding	-
chr10_60293630_60294932	chr10	60293630	60294932	ENSMUSG00000020099.6	Unc5b	ENSMUST00000105458.1	protein_coding	-
chr10_60551712_60553481	chr10	60551712	60553481	ENSMUSG00000020098.6	Pcbd1	ENSMUST00000020298.6	protein_coding	+
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000124896.1	retained_intron	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000126307.1	protein_coding	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000142192.1	processed_transcript	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000137833.1	protein_coding	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000155919.1	protein_coding	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000150258.1	nonsense_mediated_decay	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000092498.5	protein_coding	-
chr10_60608604_60611051	chr10	60608604	60611051	ENSMUSG00000020097.8	Sgpl1	ENSMUST00000122259.1	protein_coding	-
chr10_60634270_60634637	chr10	60634270	60634637	ENSMUSG00000020096.12	Tbata	ENSMUST00000122261.1	protein_coding	+
chr10_60634270_60634637	chr10	60634270	60634637	ENSMUSG00000020096.12	Tbata	ENSMUST00000121297.1	protein_coding	+
chr10_60634270_60634637	chr10	60634270	60634637	ENSMUSG00000020096.12	Tbata	ENSMUST00000035894.5	protein_coding	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000143207.1	processed_transcript	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000148181.1	processed_transcript	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000151886.1	processed_transcript	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000079235.5	protein_coding	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000092494.5	protein_coding	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000140456.1	processed_transcript	+
chr10_60637717_60639074	chr10	60637717	60639074	ENSMUSG00000020096.12	Tbata	ENSMUST00000126831.1	nonsense_mediated_decay	+
chr10_60664712_60665045	chr10	60664712	60665045	ENSMUSG00000093069.1	AC123530.1	ENSMUST00000175328.1	miRNA	+
chr10_60735487_60736901	chr10	60735487	60736901	ENSMUSG00000059901.6	Adamts14	ENSMUST00000120336.1	protein_coding	-
chr10_60735487_60736901	chr10	60735487	60736901	ENSMUSG00000059901.6	Adamts14	ENSMUST00000092486.4	protein_coding	-
chr10_60759719_60760848	chr10	60759719	60760848	ENSMUSG00000037202.5	Prf1	ENSMUST00000035419.5	protein_coding	+
chr10_60772552_60772995	chr10	60772552	60772995	ENSMUSG00000061488.3	Rpl27a-ps1	ENSMUST00000075382.3	protein_coding	+
chr10_60845032_60846800	chr10	60845032	60846800	ENSMUSG00000020092.8	X99384	ENSMUST00000020289.8	protein_coding	-
chr10_60913974_60915902	chr10	60913974	60915902	ENSMUSG00000020091.8	Eif4ebp2	ENSMUST00000167087.1	protein_coding	-
chr10_60913974_60915902	chr10	60913974	60915902	ENSMUSG00000020091.8	Eif4ebp2	ENSMUST00000020288.7	protein_coding	-
chr10_60938029_60939782	chr10	60938029	60939782	ENSMUSG00000037151.7	Lrrc20	ENSMUST00000049242.7	protein_coding	+
chr10_60938029_60939782	chr10	60938029	60939782	ENSMUSG00000043126.4	D830039M14Rik	ENSMUST00000051330.4	protein_coding	-
chr10_61057956_61058164	chr10	61057956	61058164	ENSMUSG00000020090.5	Npffr1	ENSMUST00000020287.5	protein_coding	+
chr10_61110364_61112310	chr10	61110364	61112310	ENSMUSG00000020089.7	Ppa1	ENSMUST00000020286.6	protein_coding	+
chr10_61110364_61112310	chr10	61110364	61112310	ENSMUSG00000020089.7	Ppa1	ENSMUST00000160470.1	retained_intron	+
chr10_61110364_61112310	chr10	61110364	61112310	ENSMUSG00000020089.7	Ppa1	ENSMUST00000170726.1	protein_coding	+
chr10_61125121_61125592	chr10	61125121	61125592	ENSMUSG00000020089.7	Ppa1	ENSMUST00000160607.1	processed_transcript	+
chr10_61142239_61143836	chr10	61142239	61143836	ENSMUSG00000020088.9	Sar1a	ENSMUST00000020285.8	protein_coding	+
chr10_61157515_61159335	chr10	61157515	61159335	ENSMUSG00000020087.4	Tysnd1	ENSMUST00000020284.4	protein_coding	+
chr10_61177427_61179668	chr10	61177427	61179668	ENSMUSG00000020085.9	Aifm2	ENSMUST00000105455.2	protein_coding	+
chr10_61177427_61179668	chr10	61177427	61179668	ENSMUSG00000020085.9	Aifm2	ENSMUST00000131361.1	retained_intron	+
chr10_61177427_61179668	chr10	61177427	61179668	ENSMUSG00000020085.9	Aifm2	ENSMUST00000067857.4	protein_coding	+
chr10_61177427_61179668	chr10	61177427	61179668	ENSMUSG00000020085.9	Aifm2	ENSMUST00000099706.2	protein_coding	+
chr10_61177427_61179668	chr10	61177427	61179668	ENSMUSG00000020085.9	Aifm2	ENSMUST00000129809.1	processed_transcript	+
chr10_61183106_61183401	chr10	61183106	61183401	ENSMUSG00000020085.9	Aifm2	ENSMUST00000080099.5	protein_coding	+
chr10_61245378_61247431	chr10	61245378	61247431	ENSMUSG00000020086.5	H2afy2	ENSMUST00000165447.1	protein_coding	-
chr10_61245378_61247431	chr10	61245378	61247431	ENSMUSG00000020086.5	H2afy2	ENSMUST00000020283.4	protein_coding	-
chr10_61245378_61247431	chr10	61245378	61247431	ENSMUSG00000020086.5	H2afy2	ENSMUST00000169265.1	protein_coding	-
chr10_61328645_61329234	chr10	61328645	61329234	ENSMUSG00000058806.7	Col13a1	ENSMUST00000145469.1	protein_coding	-
chr10_61340403_61341386	chr10	61340403	61341386	ENSMUSG00000058806.7	Col13a1	ENSMUST00000105451.1	processed_transcript	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000051826.7	retained_intron	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000105450.2	protein_coding	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000092484.4	protein_coding	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000048320.7	protein_coding	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000105453.1	protein_coding	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000105452.2	protein_coding	-
chr10_61440916_61441970	chr10	61440916	61441970	ENSMUSG00000058806.7	Col13a1	ENSMUST00000105454.2	protein_coding	-
chr10_61533379_61533787	chr10	61533379	61533787	ENSMUSG00000046687.4	Gm5424	ENSMUST00000053865.4	retrotransposed	+
chr10_61573169_61574510	chr10	61573169	61574510	ENSMUSG00000020083.6	2010107G23Rik	ENSMUST00000141144.1	protein_coding	-
chr10_61573169_61574510	chr10	61573169	61574510	ENSMUSG00000020083.6	2010107G23Rik	ENSMUST00000142796.1	protein_coding	-
chr10_61573169_61574510	chr10	61573169	61574510	ENSMUSG00000020083.6	2010107G23Rik	ENSMUST00000124615.1	protein_coding	-
chr10_61573169_61574510	chr10	61573169	61574510	ENSMUSG00000020083.6	2010107G23Rik	ENSMUST00000142821.1	protein_coding	-
chr10_61573169_61574510	chr10	61573169	61574510	ENSMUSG00000020083.6	2010107G23Rik	ENSMUST00000125704.1	protein_coding	-
chr10_61595345_61595649	chr10	61595345	61595649	ENSMUSG00000044312.3	Neurog3	ENSMUST00000050103.1	protein_coding	+
chr10_61693053_61694434	chr10	61693053	61694434	ENSMUSG00000037031.8	Tspan15	ENSMUST00000047883.8	protein_coding	-
chr10_61715291_61715641	chr10	61715291	61715641	ENSMUSG00000020081.5	Tacr2	ENSMUST00000020278.5	protein_coding	+
chr10_61789339_61791020	chr10	61789339	61791020	ENSMUSG00000037012.11	Hk1	ENSMUST00000139228.1	protein_coding	-
chr10_61801850_61803916	chr10	61801850	61803916	ENSMUSG00000085347.1	2210417K05Rik	ENSMUST00000123457.1	antisense	+
chr10_61801850_61803916	chr10	61801850	61803916	ENSMUSG00000085347.1	2210417K05Rik	ENSMUST00000143122.1	antisense	+
chr10_61801850_61803916	chr10	61801850	61803916	ENSMUSG00000085347.1	2210417K05Rik	ENSMUST00000142968.1	antisense	+
chr10_61801850_61803916	chr10	61801850	61803916	ENSMUSG00000037012.11	Hk1	ENSMUST00000072357.6	protein_coding	-
chr10_61801850_61803916	chr10	61801850	61803916	ENSMUSG00000037012.11	Hk1	ENSMUST00000099691.4	protein_coding	-
chr10_61805349_61805648	chr10	61805349	61805648	ENSMUSG00000037012.11	Hk1	ENSMUST00000142527.1	retained_intron	-
chr10_61805349_61805648	chr10	61805349	61805648	ENSMUSG00000037012.11	Hk1	ENSMUST00000143179.1	protein_coding	-
chr10_61805349_61805648	chr10	61805349	61805648	ENSMUSG00000037012.11	Hk1	ENSMUST00000130422.1	protein_coding	-
chr10_61842364_61842759	chr10	61842364	61842759	ENSMUSG00000037012.11	Hk1	ENSMUST00000143236.1	protein_coding	-
chr10_61842364_61842759	chr10	61842364	61842759	ENSMUSG00000037012.11	Hk1	ENSMUST00000133429.1	protein_coding	-
chr10_61842364_61842759	chr10	61842364	61842759	ENSMUSG00000037012.11	Hk1	ENSMUST00000132926.1	protein_coding	-
chr10_61842364_61842759	chr10	61842364	61842759	ENSMUSG00000037012.11	Hk1	ENSMUST00000116238.2	protein_coding	-
chr10_61873340_61876704	chr10	61873340	61876704	ENSMUSG00000020080.8	Hkdc1	ENSMUST00000159454.1	retained_intron	-
chr10_61885014_61885537	chr10	61885014	61885537	ENSMUSG00000020080.8	Hkdc1	ENSMUST00000159579.1	retained_intron	-
chr10_61885014_61885537	chr10	61885014	61885537	ENSMUSG00000020080.8	Hkdc1	ENSMUST00000020277.8	protein_coding	-
chr10_61911849_61913366	chr10	61911849	61913366	ENSMUSG00000020079.9	Supv3l1	ENSMUST00000162023.1	nonsense_mediated_decay	-
chr10_61911849_61913366	chr10	61911849	61913366	ENSMUSG00000020079.9	Supv3l1	ENSMUST00000020273.9	protein_coding	-
chr10_61948564_61950295	chr10	61948564	61950295	ENSMUSG00000020078.8	Vps26a	ENSMUST00000020272.8	protein_coding	-
chr10_61948564_61950295	chr10	61948564	61950295	ENSMUSG00000020078.8	Vps26a	ENSMUST00000105447.3	protein_coding	-
chr10_61948564_61950295	chr10	61948564	61950295	ENSMUSG00000020078.8	Vps26a	ENSMUST00000092473.3	protein_coding	-
chr10_61970214_61971054	chr10	61970214	61971054	ENSMUSG00000020077.8	Srgn	ENSMUST00000159020.1	protein_coding	-
chr10_61970214_61971054	chr10	61970214	61971054	ENSMUSG00000020077.8	Srgn	ENSMUST00000162161.1	protein_coding	-
chr10_61970214_61971054	chr10	61970214	61971054	ENSMUSG00000020077.8	Srgn	ENSMUST00000020271.6	protein_coding	-
chr10_62020566_62020844	chr10	62020566	62020844	ENSMUSG00000093370.1	AC126428.1	ENSMUST00000175629.1	miRNA	+
chr10_62032998_62033616	chr10	62032998	62033616	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000160228.1	retained_intron	-
chr10_62040267_62041836	chr10	62040267	62041836	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000159722.1	retained_intron	-
chr10_62040267_62041836	chr10	62040267	62041836	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000105444.1	protein_coding	-
chr10_62040267_62041836	chr10	62040267	62041836	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000162759.1	protein_coding	-
chr10_62040267_62041836	chr10	62040267	62041836	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000162525.1	protein_coding	-
chr10_62040267_62041836	chr10	62040267	62041836	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000065887.7	protein_coding	-
chr10_62040267_62041836	chr10	62040267	62041836	ENSMUSG00000036955.8	2510003E04Rik	ENSMUST00000159704.1	processed_transcript	-
chr10_62064178_62065822	chr10	62064178	62065822	ENSMUSG00000020075.7	Ddx21	ENSMUST00000045866.7	protein_coding	-
chr10_62113041_62114904	chr10	62113041	62114904	ENSMUSG00000020076.5	Ddx50	ENSMUST00000020270.4	protein_coding	-
chr10_62188337_62189602	chr10	62188337	62189602	ENSMUSG00000036923.6	Stox1	ENSMUST00000126979.1	nonsense_mediated_decay	-
chr10_62188337_62189602	chr10	62188337	62189602	ENSMUSG00000036923.6	Stox1	ENSMUST00000133371.1	protein_coding	-
chr10_62188337_62189602	chr10	62188337	62189602	ENSMUSG00000036923.6	Stox1	ENSMUST00000148720.1	protein_coding	-
chr10_62254177_62256237	chr10	62254177	62256237	ENSMUSG00000020074.5	Ccar1	ENSMUST00000020268.5	protein_coding	-
chr10_62254177_62256237	chr10	62254177	62256237	ENSMUSG00000020074.5	Ccar1	ENSMUST00000105443.2	protein_coding	-
chr10_62327805_62329793	chr10	62327805	62329793	ENSMUSG00000047146.8	Tet1	ENSMUST00000173081.1	processed_transcript	-
chr10_62356402_62356695	chr10	62356402	62356695	ENSMUSG00000084569.1	U6	ENSMUST00000122620.1	snRNA	-
chr10_62381982_62382182	chr10	62381982	62382182	ENSMUSG00000088674.1	7SK	ENSMUST00000158049.1	misc_RNA	+
chr10_62382370_62384048	chr10	62382370	62384048	ENSMUSG00000088674.1	7SK	ENSMUST00000158049.1	misc_RNA	+
chr10_62382370_62384048	chr10	62382370	62384048	ENSMUSG00000071253.2	Slc25a16	ENSMUST00000044977.3	protein_coding	+
chr10_62382370_62384048	chr10	62382370	62384048	ENSMUSG00000071253.2	Slc25a16	ENSMUST00000138597.1	retained_intron	+
chr10_62382370_62384048	chr10	62382370	62384048	ENSMUSG00000071253.2	Slc25a16	ENSMUST00000144459.1	protein_coding	+
chr10_62409238_62410736	chr10	62409238	62410736	ENSMUSG00000036875.8	Dna2	ENSMUST00000131422.1	protein_coding	+
chr10_62409238_62410736	chr10	62409238	62410736	ENSMUSG00000036875.8	Dna2	ENSMUST00000169366.1	protein_coding	+
chr10_62409238_62410736	chr10	62409238	62410736	ENSMUSG00000036875.8	Dna2	ENSMUST00000092462.5	nonsense_mediated_decay	+
chr10_62409238_62410736	chr10	62409238	62410736	ENSMUSG00000036875.8	Dna2	ENSMUST00000131715.1	retained_intron	+
chr10_62409238_62410736	chr10	62409238	62410736	ENSMUSG00000036875.8	Dna2	ENSMUST00000129785.1	retained_intron	+
chr10_62428405_62429532	chr10	62428405	62429532	ENSMUSG00000036875.8	Dna2	ENSMUST00000139212.1	retained_intron	+
chr10_62428405_62429532	chr10	62428405	62429532	ENSMUSG00000036875.8	Dna2	ENSMUST00000137378.1	retained_intron	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000148259.1	retained_intron	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000020264.8	protein_coding	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000131718.1	protein_coding	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000119567.1	protein_coding	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000143594.1	nonsense_mediated_decay	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000122231.1	protein_coding	+
chr10_62442417_62443922	chr10	62442417	62443922	ENSMUSG00000020070.11	Rufy2	ENSMUST00000062600.7	nonsense_mediated_decay	+
chr10_62485413_62487636	chr10	62485413	62487636	ENSMUSG00000020068.4	Pbld2	ENSMUST00000124784.1	protein_coding	+
chr10_62485413_62487636	chr10	62485413	62487636	ENSMUSG00000020068.4	Pbld2	ENSMUST00000020262.4	protein_coding	+
chr10_62485413_62487636	chr10	62485413	62487636	ENSMUSG00000020069.9	Hnrnph3	ENSMUST00000119814.1	protein_coding	-
chr10_62485413_62487636	chr10	62485413	62487636	ENSMUSG00000020069.9	Hnrnph3	ENSMUST00000140743.1	nonsense_mediated_decay	-
chr10_62485413_62487636	chr10	62485413	62487636	ENSMUSG00000020069.9	Hnrnph3	ENSMUST00000020263.7	protein_coding	-
chr10_62485413_62487636	chr10	62485413	62487636	ENSMUSG00000020069.9	Hnrnph3	ENSMUST00000118898.1	protein_coding	-
chr10_62520118_62520537	chr10	62520118	62520537	ENSMUSG00000087030.1	Gm16143	ENSMUST00000155982.1	antisense	-
chr10_62522917_62524812	chr10	62522917	62524812	ENSMUSG00000020072.7	Pbld1	ENSMUST00000020266.7	protein_coding	+
chr10_62562182_62563963	chr10	62562182	62563963	ENSMUSG00000036816.3	Atoh7	ENSMUST00000044059.3	protein_coding	+
chr10_62666153_62666900	chr10	62666153	62666900	ENSMUSG00000020067.7	Mypn	ENSMUST00000095580.2	protein_coding	-
chr10_62705464_62707528	chr10	62705464	62707528	ENSMUSG00000020064.7	Herc4	ENSMUST00000092452.4	protein_coding	+
chr10_62705464_62707528	chr10	62705464	62707528	ENSMUSG00000020064.7	Herc4	ENSMUST00000020258.7	protein_coding	+
chr10_62705464_62707528	chr10	62705464	62707528	ENSMUSG00000045391.3	1700120B22Rik	ENSMUST00000054837.3	protein_coding	-
chr10_62799624_62799998	chr10	62799624	62799998	ENSMUSG00000020063.9	Sirt1	ENSMUST00000131371.1	retained_intron	-
chr10_62799624_62799998	chr10	62799624	62799998	ENSMUSG00000020063.9	Sirt1	ENSMUST00000146028.1	nonsense_mediated_decay	-
chr10_62800801_62802742	chr10	62800801	62802742	ENSMUSG00000020063.9	Sirt1	ENSMUST00000105442.2	protein_coding	-
chr10_62800801_62802742	chr10	62800801	62802742	ENSMUSG00000020063.9	Sirt1	ENSMUST00000020257.6	protein_coding	-
chr10_62844213_62845963	chr10	62844213	62845963	ENSMUSG00000036764.5	Dnajc12	ENSMUST00000129625.1	protein_coding	+
chr10_62844213_62845963	chr10	62844213	62845963	ENSMUSG00000020063.9	Sirt1	ENSMUST00000120239.1	protein_coding	-
chr10_62849158_62850055	chr10	62849158	62850055	ENSMUSG00000036764.5	Dnajc12	ENSMUST00000043317.5	protein_coding	+
chr10_62849158_62850055	chr10	62849158	62850055	ENSMUSG00000036764.5	Dnajc12	ENSMUST00000136832.1	retained_intron	+
chr10_62884686_62884981	chr10	62884686	62884981	ENSMUSG00000048185.4	Gm7075	ENSMUST00000054760.4	protein_coding	-
chr10_62891126_62893332	chr10	62891126	62893332	ENSMUSG00000060843.5	Ctnna3	ENSMUST00000105441.1	protein_coding	+
chr10_62919934_62921411	chr10	62919934	62921411	ENSMUSG00000060843.5	Ctnna3	ENSMUST00000105440.1	protein_coding	+
chr10_63036918_63037355	chr10	63036918	63037355	ENSMUSG00000060843.5	Ctnna3	ENSMUST00000133190.1	processed_transcript	+
chr10_63283560_63283925	chr10	63283560	63283925	ENSMUSG00000060843.5	Ctnna3	ENSMUST00000135474.1	processed_transcript	+
chr10_63552459_63553550	chr10	63552459	63553550	ENSMUSG00000042846.8	Lrrtm3	ENSMUST00000133588.1	protein_coding	-
chr10_63552459_63553550	chr10	63552459	63553550	ENSMUSG00000042846.8	Lrrtm3	ENSMUST00000148712.1	retained_intron	-
chr10_63552459_63553550	chr10	63552459	63553550	ENSMUSG00000042846.8	Lrrtm3	ENSMUST00000131945.1	processed_transcript	-
chr10_63552459_63553550	chr10	63552459	63553550	ENSMUSG00000042846.8	Lrrtm3	ENSMUST00000105439.1	protein_coding	-
chr10_66382631_66385383	chr10	66382631	66385383	ENSMUSG00000091024.1	Gm17351	ENSMUST00000171655.1	lincRNA	+
chr10_66382631_66385383	chr10	66382631	66385383	ENSMUSG00000087275.2	1110002J07Rik	ENSMUST00000152840.1	lincRNA	-
chr10_66558631_66560401	chr10	66558631	66560401	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000174062.1	retained_intron	+
chr10_66558631_66560401	chr10	66558631	66560401	ENSMUSG00000075003.2	Jmjd1c	ENSMUST00000095575.3	protein_coding	+
chr10_66558631_66560401	chr10	66558631	66560401	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000173295.1	retained_intron	+
chr10_66558631_66560401	chr10	66558631	66560401	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000174317.1	protein_coding	+
chr10_66558631_66560401	chr10	66558631	66560401	ENSMUSG00000019873.6	Reep3	ENSMUST00000020023.6	protein_coding	-
chr10_66588640_66590554	chr10	66588640	66590554	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000174408.1	protein_coding	+
chr10_66588640_66590554	chr10	66588640	66590554	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000051446.8	protein_coding	+
chr10_66588640_66590554	chr10	66588640	66590554	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000095573.4	protein_coding	+
chr10_66648209_66649132	chr10	66648209	66649132	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000173661.1	retained_intron	+
chr10_66648209_66649132	chr10	66648209	66649132	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000173689.1	protein_coding	+
chr10_66648209_66649132	chr10	66648209	66649132	ENSMUSG00000037876.9	Jmjd1c	ENSMUST00000173949.1	retained_intron	+
chr10_66746290_66748724	chr10	66746290	66748724	ENSMUSG00000075000.4	Nrbf2	ENSMUST00000159002.1	protein_coding	-
chr10_66746290_66748724	chr10	66746290	66748724	ENSMUSG00000075000.4	Nrbf2	ENSMUST00000172012.1	protein_coding	-
chr10_66746290_66748724	chr10	66746290	66748724	ENSMUSG00000075000.4	Nrbf2	ENSMUST00000077839.6	protein_coding	-
chr10_66998065_66998288	chr10	66998065	66998288	ENSMUSG00000037868.8	Egr2	ENSMUST00000145754.1	protein_coding	+
chr10_66998065_66998288	chr10	66998065	66998288	ENSMUSG00000037868.8	Egr2	ENSMUST00000145936.1	protein_coding	+
chr10_66998382_66998591	chr10	66998382	66998591	ENSMUSG00000037868.8	Egr2	ENSMUST00000145754.1	protein_coding	+
chr10_66998382_66998591	chr10	66998382	66998591	ENSMUSG00000037868.8	Egr2	ENSMUST00000145936.1	protein_coding	+
chr10_66998707_67000716	chr10	66998707	67000716	ENSMUSG00000037868.8	Egr2	ENSMUST00000048289.7	protein_coding	+
chr10_66998707_67000716	chr10	66998707	67000716	ENSMUSG00000037868.8	Egr2	ENSMUST00000169930.1	protein_coding	+
chr10_66998707_67000716	chr10	66998707	67000716	ENSMUSG00000037868.8	Egr2	ENSMUST00000105438.2	protein_coding	+
chr10_66998707_67000716	chr10	66998707	67000716	ENSMUSG00000037868.8	Egr2	ENSMUST00000130933.1	protein_coding	+
chr10_66998707_67000716	chr10	66998707	67000716	ENSMUSG00000037868.8	Egr2	ENSMUST00000146986.1	protein_coding	+
chr10_67001440_67001968	chr10	67001440	67001968	ENSMUSG00000037868.8	Egr2	ENSMUST00000127820.1	protein_coding	+
chr10_67010609_67012681	chr10	67010609	67012681	ENSMUSG00000057134.4	Ado	ENSMUST00000075686.4	protein_coding	-
chr10_67034623_67034823	chr10	67034623	67034823	ENSMUSG00000074999.2	Gm10797	ENSMUST00000099661.2	protein_coding	+
chr10_67360866_67361585	chr10	67360866	67361585	ENSMUSG00000037855.9	Zfp365	ENSMUST00000127869.1	processed_transcript	-
chr10_67361711_67362012	chr10	67361711	67362012	ENSMUSG00000037855.9	Zfp365	ENSMUST00000127869.1	processed_transcript	-
chr10_67373180_67375685	chr10	67373180	67375685	ENSMUSG00000037855.9	Zfp365	ENSMUST00000138543.1	retained_intron	-
chr10_67373180_67375685	chr10	67373180	67375685	ENSMUSG00000037855.9	Zfp365	ENSMUST00000064656.7	protein_coding	-
chr10_67441569_67442921	chr10	67441569	67442921	ENSMUSG00000037846.11	Rtkn2	ENSMUST00000118160.1	protein_coding	+
chr10_67441569_67442921	chr10	67441569	67442921	ENSMUSG00000037846.11	Rtkn2	ENSMUST00000105437.1	protein_coding	+
chr10_67441569_67442921	chr10	67441569	67442921	ENSMUSG00000037846.11	Rtkn2	ENSMUST00000068994.7	nonsense_mediated_decay	+
chr10_67441569_67442921	chr10	67441569	67442921	ENSMUSG00000037846.11	Rtkn2	ENSMUST00000147556.1	nonsense_mediated_decay	+
chr10_67441569_67442921	chr10	67441569	67442921	ENSMUSG00000037846.11	Rtkn2	ENSMUST00000117086.1	protein_coding	+
chr10_67488993_67489595	chr10	67488993	67489595	ENSMUSG00000086838.1	Gm16212	ENSMUST00000143555.1	antisense	-
chr10_67488993_67489595	chr10	67488993	67489595	ENSMUSG00000086838.1	Gm16212	ENSMUST00000136190.1	antisense	-
chr10_67598813_67599957	chr10	67598813	67599957	ENSMUSG00000019947.8	Arid5b	ENSMUST00000165054.1	protein_coding	-
chr10_67741392_67742098	chr10	67741392	67742098	ENSMUSG00000019947.8	Arid5b	ENSMUST00000020106.7	protein_coding	-
chr10_68003465_68005267	chr10	68003465	68005267	ENSMUSG00000019945.3	1700040L02Rik	ENSMUST00000020103.2	protein_coding	-
chr10_68185631_68187662	chr10	68185631	68187662	ENSMUSG00000060044.6	Tmem26	ENSMUST00000080995.6	protein_coding	+
chr10_68185631_68187662	chr10	68185631	68187662	ENSMUSG00000060044.6	Tmem26	ENSMUST00000166611.1	protein_coding	+
chr10_68613756_68614498	chr10	68613756	68614498	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000167286.1	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000020101.5	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000164876.1	retained_intron	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000067908.6	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000167384.1	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000163497.1	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000164212.1	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000168478.1	protein_coding	+
chr10_68675252_68677172	chr10	68675252	68677172	ENSMUSG00000090622.1	A930033H14Rik	ENSMUST00000170048.1	protein_coding	-
chr10_68681290_68683496	chr10	68681290	68683496	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000172261.1	protein_coding	+
chr10_68728033_68728768	chr10	68728033	68728768	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000169569.1	processed_transcript	+
chr10_68741343_68742601	chr10	68741343	68742601	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000163760.1	protein_coding	+
chr10_68741343_68742601	chr10	68741343	68742601	ENSMUSG00000019944.7	Rhobtb1	ENSMUST00000165765.1	processed_transcript	+
chr10_68804263_68805648	chr10	68804263	68805648	ENSMUSG00000019942.6	Cdk1	ENSMUST00000123458.1	retained_intron	-
chr10_68814692_68816217	chr10	68814692	68816217	ENSMUSG00000019942.6	Cdk1	ENSMUST00000124054.1	retained_intron	-
chr10_68814692_68816217	chr10	68814692	68816217	ENSMUSG00000019942.6	Cdk1	ENSMUST00000119827.1	protein_coding	-
chr10_68814692_68816217	chr10	68814692	68816217	ENSMUSG00000019942.6	Cdk1	ENSMUST00000020099.5	protein_coding	-
chr10_68996262_68998900	chr10	68996262	68998900	ENSMUSG00000069601.5	Ank3	ENSMUST00000092434.4	protein_coding	+
chr10_68996262_68998900	chr10	68996262	68998900	ENSMUSG00000069601.5	Ank3	ENSMUST00000092431.4	protein_coding	+
chr10_68996262_68998900	chr10	68996262	68998900	ENSMUSG00000069601.5	Ank3	ENSMUST00000054167.7	protein_coding	+
chr10_68996262_68998900	chr10	68996262	68998900	ENSMUSG00000069601.5	Ank3	ENSMUST00000047061.5	protein_coding	+
chr10_68996262_68998900	chr10	68996262	68998900	ENSMUSG00000069601.5	Ank3	ENSMUST00000092432.5	protein_coding	+
chr10_69247932_69250819	chr10	69247932	69250819	ENSMUSG00000069601.5	Ank3	ENSMUST00000060773.8	protein_coding	+
chr10_69387059_69388923	chr10	69387059	69388923	ENSMUSG00000069601.5	Ank3	ENSMUST00000092433.4	protein_coding	+
chr10_69557710_69560162	chr10	69557710	69560162	ENSMUSG00000048701.7	Ccdc6	ENSMUST00000147545.1	protein_coding	+
chr10_69636759_69637996	chr10	69636759	69637996	ENSMUSG00000048701.7	Ccdc6	ENSMUST00000145990.1	retained_intron	+
chr10_69636759_69637996	chr10	69636759	69637996	ENSMUSG00000048701.7	Ccdc6	ENSMUST00000156001.1	protein_coding	+
chr10_69636759_69637996	chr10	69636759	69637996	ENSMUSG00000048701.7	Ccdc6	ENSMUST00000135607.1	protein_coding	+
chr10_69667069_69668407	chr10	69667069	69668407	ENSMUSG00000019933.1	2310015B20Rik	ENSMUST00000020090.1	protein_coding	+
chr10_69707079_69709277	chr10	69707079	69709277	ENSMUSG00000037762.6	Slc16a9	ENSMUST00000046807.6	protein_coding	+
chr10_69729246_69730056	chr10	69729246	69730056	ENSMUSG00000037762.6	Slc16a9	ENSMUST00000155933.1	retained_intron	+
chr10_69749520_69751455	chr10	69749520	69751455	ENSMUSG00000052426.4	Gm9877	ENSMUST00000064271.4	pseudogene	-
chr10_69902507_69904606	chr10	69902507	69904606	ENSMUSG00000043259.8	Fam13c	ENSMUST00000105436.2	protein_coding	+
chr10_69902507_69904606	chr10	69902507	69904606	ENSMUSG00000043259.8	Fam13c	ENSMUST00000173042.1	protein_coding	+
chr10_69902507_69904606	chr10	69902507	69904606	ENSMUSG00000043259.8	Fam13c	ENSMUST00000062883.6	protein_coding	+
chr10_70055163_70055813	chr10	70055163	70055813	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000162251.1	protein_coding	-
chr10_70060904_70063136	chr10	70060904	70063136	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000163054.1	retained_intron	-
chr10_70060904_70063136	chr10	70060904	70063136	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000162470.1	retained_intron	-
chr10_70060904_70063136	chr10	70060904	70063136	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000046513.3	protein_coding	-
chr10_70118407_70119420	chr10	70118407	70119420	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000161687.1	processed_transcript	-
chr10_70118407_70119420	chr10	70118407	70119420	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000162793.1	protein_coding	-
chr10_70118407_70119420	chr10	70118407	70119420	ENSMUSG00000037747.3	Phyhipl	ENSMUST00000162144.1	protein_coding	-
chr10_70331118_70331438	chr10	70331118	70331438	ENSMUSG00000047692.5	4930533K18Rik	ENSMUST00000058942.5	protein_coding	+
chr10_70411157_70411407	chr10	70411157	70411407	ENSMUSG00000014329.7	Bicc1	ENSMUST00000144740.1	retained_intron	-
chr10_70545752_70546178	chr10	70545752	70546178	ENSMUSG00000090212.1	Gm15647	ENSMUST00000160178.1	antisense	+
chr10_70609462_70610417	chr10	70609462	70610417	ENSMUSG00000014329.7	Bicc1	ENSMUST00000131445.1	protein_coding	-
chr10_70621594_70623704	chr10	70621594	70623704	ENSMUSG00000014329.7	Bicc1	ENSMUST00000014473.5	protein_coding	-
chr10_70621594_70623704	chr10	70621594	70623704	ENSMUSG00000014329.7	Bicc1	ENSMUST00000105434.1	protein_coding	-
chr10_70621594_70623704	chr10	70621594	70623704	ENSMUSG00000014329.7	Bicc1	ENSMUST00000143791.1	protein_coding	-
chr10_70697670_70697910	chr10	70697670	70697910	ENSMUSG00000003923.8	Tfam	ENSMUST00000145220.1	processed_transcript	-
chr10_70700156_70701487	chr10	70700156	70701487	ENSMUSG00000003923.8	Tfam	ENSMUST00000121685.1	protein_coding	-
chr10_70700156_70701487	chr10	70700156	70701487	ENSMUSG00000003923.8	Tfam	ENSMUST00000105432.3	protein_coding	-
chr10_70700156_70701487	chr10	70700156	70701487	ENSMUSG00000003923.8	Tfam	ENSMUST00000092430.4	protein_coding	-
chr10_70746785_70748405	chr10	70746785	70748405	ENSMUSG00000019927.6	Ube2d1	ENSMUST00000144231.1	retained_intron	-
chr10_70746785_70748405	chr10	70746785	70748405	ENSMUSG00000019927.6	Ube2d1	ENSMUST00000020085.6	protein_coding	-
chr10_70807198_70808145	chr10	70807198	70808145	ENSMUSG00000037710.8	Cisd1	ENSMUST00000045887.8	protein_coding	-
chr10_70809899_70812293	chr10	70809899	70812293	ENSMUSG00000060733.7	Ipmk	ENSMUST00000079252.6	protein_coding	+
chr10_70809899_70812293	chr10	70809899	70812293	ENSMUSG00000060733.7	Ipmk	ENSMUST00000118381.1	protein_coding	+
chr10_70809899_70812293	chr10	70809899	70812293	ENSMUSG00000060733.7	Ipmk	ENSMUST00000147277.1	nonsense_mediated_decay	+
chr10_70809899_70812293	chr10	70809899	70812293	ENSMUSG00000060733.7	Ipmk	ENSMUST00000121446.1	protein_coding	+
chr10_70809899_70812293	chr10	70809899	70812293	ENSMUSG00000060733.7	Ipmk	ENSMUST00000141153.1	retained_intron	+
chr10_70844145_70845389	chr10	70844145	70845389	ENSMUSG00000060733.7	Ipmk	ENSMUST00000141984.1	nonsense_mediated_decay	+
chr10_71443310_71443695	chr10	71443310	71443695	ENSMUSG00000043859.4	1700049L16Rik	ENSMUST00000049520.4	retrotransposed	-
chr10_71771882_71772151	chr10	71771882	71772151	ENSMUSG00000053830.2	Gm9923	ENSMUST00000061324.3	retrotransposed	+
chr10_72116923_72118507	chr10	72116923	72118507	ENSMUSG00000019923.6	Zwint	ENSMUST00000020081.4	protein_coding	+
chr10_72116923_72118507	chr10	72116923	72118507	ENSMUSG00000019923.6	Zwint	ENSMUST00000105431.1	protein_coding	+
chr10_72116923_72118507	chr10	72116923	72118507	ENSMUSG00000019923.6	Zwint	ENSMUST00000160337.1	protein_coding	+
chr10_72116923_72118507	chr10	72116923	72118507	ENSMUSG00000019923.6	Zwint	ENSMUST00000161001.1	protein_coding	+
chr10_72116923_72118507	chr10	72116923	72118507	ENSMUSG00000019923.6	Zwint	ENSMUST00000160128.1	retained_intron	+
chr10_72118557_72119041	chr10	72118557	72119041	ENSMUSG00000019923.6	Zwint	ENSMUST00000163046.1	retained_intron	+
chr10_72119126_72119427	chr10	72119126	72119427	ENSMUSG00000019923.6	Zwint	ENSMUST00000163046.1	retained_intron	+
chr10_72119126_72119427	chr10	72119126	72119427	ENSMUSG00000019923.6	Zwint	ENSMUST00000159549.1	processed_transcript	+
chr10_72561854_72562085	chr10	72561854	72562085	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000123398.1	protein_coding	+
chr10_72561854_72562085	chr10	72561854	72562085	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000148572.1	retained_intron	+
chr10_72561854_72562085	chr10	72561854	72562085	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000156999.1	processed_transcript	+
chr10_72561854_72562085	chr10	72561854	72562085	ENSMUSG00000046980.7	Pcdh15	ENSMUST00000053544.7	pseudogene	+
chr10_72562291_72563012	chr10	72562291	72563012	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000148572.1	retained_intron	+
chr10_72562291_72563012	chr10	72562291	72563012	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000156999.1	processed_transcript	+
chr10_72562291_72563012	chr10	72562291	72563012	ENSMUSG00000046980.7	Pcdh15	ENSMUST00000053544.7	pseudogene	+
chr10_72789632_72789925	chr10	72789632	72789925	ENSMUSG00000085456.1	Gm15398	ENSMUST00000147653.1	lincRNA	-
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105430.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105423.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105428.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105427.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105425.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105426.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000092420.5	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000105424.2	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000064562.6	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000136096.1	nonsense_mediated_decay	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000124046.1	protein_coding	+
chr10_73284242_73285346	chr10	73284242	73285346	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000146682.1	processed_transcript	+
chr10_74083967_74084167	chr10	74083967	74084167	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000144302.1	nonsense_mediated_decay	+
chr10_74093298_74093820	chr10	74093298	74093820	ENSMUSG00000052613.8	Pcdh15	ENSMUST00000127928.1	processed_transcript	+
chr10_74429133_74431586	chr10	74429133	74431586	ENSMUSG00000040009.5	Gnaz	ENSMUST00000037813.4	protein_coding	+
chr10_74429133_74431586	chr10	74429133	74431586	ENSMUSG00000040009.5	Gnaz	ENSMUST00000160421.1	processed_transcript	+
chr10_74495132_74495708	chr10	74495132	74495708	ENSMUSG00000009070.7	Rtdr1	ENSMUST00000159761.1	retained_intron	-
chr10_74495132_74495708	chr10	74495132	74495708	ENSMUSG00000009070.7	Rtdr1	ENSMUST00000159994.1	protein_coding	-
chr10_74495132_74495708	chr10	74495132	74495708	ENSMUSG00000009070.7	Rtdr1	ENSMUST00000160072.1	protein_coding	-
chr10_74495132_74495708	chr10	74495132	74495708	ENSMUSG00000009070.7	Rtdr1	ENSMUST00000160450.1	protein_coding	-
chr10_74495132_74495708	chr10	74495132	74495708	ENSMUSG00000009070.7	Rtdr1	ENSMUST00000009214.3	protein_coding	-
chr10_74495132_74495708	chr10	74495132	74495708	ENSMUSG00000009070.7	Rtdr1	ENSMUST00000166088.1	protein_coding	-
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000136944.1	retained_intron	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000147802.1	protein_coding	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000020391.5	protein_coding	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000142507.1	retained_intron	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000122815.1	retained_intron	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000139384.1	protein_coding	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000146440.1	protein_coding	+
chr10_74499367_74500851	chr10	74499367	74500851	ENSMUSG00000020175.7	Rab36	ENSMUST00000151432.1	retained_intron	+
chr10_74521930_74524114	chr10	74521930	74524114	ENSMUSG00000009681.8	Bcr	ENSMUST00000164107.1	protein_coding	+
chr10_74521930_74524114	chr10	74521930	74524114	ENSMUSG00000009681.8	Bcr	ENSMUST00000041070.7	protein_coding	+
chr10_74674133_74675699	chr10	74674133	74675699	ENSMUSG00000033444.7	Specc1l	ENSMUST00000105421.2	protein_coding	+
chr10_74778434_74780896	chr10	74778434	74780896	ENSMUSG00000020178.5	Adora2a	ENSMUST00000105420.1	protein_coding	+
chr10_74868368_74870082	chr10	74868368	74870082	ENSMUSG00000033427.7	Upb1	ENSMUST00000039925.7	protein_coding	+
chr10_74868368_74870082	chr10	74868368	74870082	ENSMUSG00000033427.7	Upb1	ENSMUST00000138058.1	retained_intron	+
chr10_74872662_74872906	chr10	74872662	74872906	ENSMUSG00000033427.7	Upb1	ENSMUST00000132629.1	retained_intron	+
chr10_74891100_74892828	chr10	74891100	74892828	ENSMUSG00000033427.7	Upb1	ENSMUST00000129946.1	retained_intron	+
chr10_74972938_74974047	chr10	74972938	74974047	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000129307.1	retained_intron	-
chr10_74972938_74974047	chr10	74972938	74974047	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000153125.1	protein_coding	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000020180.8	Snrpd3	ENSMUST00000020397.8	protein_coding	+
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000136763.1	nonsense_mediated_decay	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000123505.1	protein_coding	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000147269.1	protein_coding	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000128419.1	protein_coding	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000138122.1	nonsense_mediated_decay	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000118936.1	protein_coding	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000039796.7	protein_coding	-
chr10_74978407_74981126	chr10	74978407	74981126	ENSMUSG00000033416.8	1110038D17Rik	ENSMUST00000145890.1	nonsense_mediated_decay	-
chr10_75021812_75023547	chr10	75021812	75023547	ENSMUSG00000046807.8	AI646023	ENSMUST00000051129.8	protein_coding	-
chr10_75026648_75026849	chr10	75026648	75026849	ENSMUSG00000006345.4	Ggt1	ENSMUST00000141062.1	protein_coding	+
chr10_75026648_75026849	chr10	75026648	75026849	ENSMUSG00000006345.4	Ggt1	ENSMUST00000152657.1	protein_coding	+
chr10_75027643_75029406	chr10	75027643	75029406	ENSMUSG00000006345.4	Ggt1	ENSMUST00000129232.1	protein_coding	+
chr10_75027643_75029406	chr10	75027643	75029406	ENSMUSG00000006345.4	Ggt1	ENSMUST00000143792.1	protein_coding	+
chr10_75031127_75031496	chr10	75031127	75031496	ENSMUSG00000006345.4	Ggt1	ENSMUST00000145928.1	protein_coding	+
chr10_75031127_75031496	chr10	75031127	75031496	ENSMUSG00000006345.4	Ggt1	ENSMUST00000131565.1	protein_coding	+
chr10_75031127_75031496	chr10	75031127	75031496	ENSMUSG00000006345.4	Ggt1	ENSMUST00000134503.1	protein_coding	+
chr10_75031127_75031496	chr10	75031127	75031496	ENSMUSG00000006345.4	Ggt1	ENSMUST00000125770.1	protein_coding	+
chr10_75031127_75031496	chr10	75031127	75031496	ENSMUSG00000006345.4	Ggt1	ENSMUST00000128886.1	protein_coding	+
chr10_75031127_75031496	chr10	75031127	75031496	ENSMUSG00000006345.4	Ggt1	ENSMUST00000151212.1	protein_coding	+
chr10_75033798_75034390	chr10	75033798	75034390	ENSMUSG00000006345.4	Ggt1	ENSMUST00000143226.1	protein_coding	+
chr10_75033798_75034390	chr10	75033798	75034390	ENSMUSG00000006345.4	Ggt1	ENSMUST00000124259.1	protein_coding	+
chr10_75033798_75034390	chr10	75033798	75034390	ENSMUSG00000006345.4	Ggt1	ENSMUST00000148447.1	processed_transcript	+
chr10_75035850_75036396	chr10	75035850	75036396	ENSMUSG00000006345.4	Ggt1	ENSMUST00000006508.3	protein_coding	+
chr10_75036749_75037011	chr10	75036749	75037011	ENSMUSG00000006345.4	Ggt1	ENSMUST00000139459.1	protein_coding	+
chr10_75051871_75052861	chr10	75051871	75052861	ENSMUSG00000006344.9	Ggt5	ENSMUST00000072217.2	protein_coding	+
chr10_75051871_75052861	chr10	75051871	75052861	ENSMUSG00000006344.9	Ggt5	ENSMUST00000105419.3	protein_coding	+
chr10_75051871_75052861	chr10	75051871	75052861	ENSMUSG00000006344.9	Ggt5	ENSMUST00000081083.6	protein_coding	+
chr10_75053238_75053473	chr10	75053238	75053473	ENSMUSG00000055872.1	Gm9985	ENSMUST00000044101.2	pseudogene	-
chr10_75106024_75107516	chr10	75106024	75107516	ENSMUSG00000006342.8	Susd2	ENSMUST00000095541.3	protein_coding	-
chr10_75106024_75107516	chr10	75106024	75107516	ENSMUSG00000006342.8	Susd2	ENSMUST00000077610.4	protein_coding	-
chr10_75128880_75131297	chr10	75128880	75131297	ENSMUSG00000020196.8	Cabin1	ENSMUST00000166935.1	protein_coding	-
chr10_75128880_75131297	chr10	75128880	75131297	ENSMUSG00000020196.8	Cabin1	ENSMUST00000165726.1	protein_coding	-
chr10_75226519_75228222	chr10	75226519	75228222	ENSMUSG00000020196.8	Cabin1	ENSMUST00000092412.5	protein_coding	-
chr10_75226519_75228222	chr10	75226519	75228222	ENSMUSG00000020196.8	Cabin1	ENSMUST00000170044.1	protein_coding	-
chr10_75226519_75228222	chr10	75226519	75228222	ENSMUSG00000020196.8	Cabin1	ENSMUST00000001712.6	protein_coding	-
chr10_75235319_75236801	chr10	75235319	75236801	ENSMUSG00000001666.8	Ddt	ENSMUST00000001716.7	protein_coding	-
chr10_75235319_75236801	chr10	75235319	75236801	ENSMUSG00000001666.8	Ddt	ENSMUST00000172820.1	protein_coding	-
chr10_75242330_75244373	chr10	75242330	75244373	ENSMUSG00000001665.4	Gstt3	ENSMUST00000174187.1	nonsense_mediated_decay	-
chr10_75242330_75244373	chr10	75242330	75244373	ENSMUSG00000001665.4	Gstt3	ENSMUST00000173537.1	protein_coding	-
chr10_75242330_75244373	chr10	75242330	75244373	ENSMUSG00000001665.4	Gstt3	ENSMUST00000001715.3	protein_coding	-
chr10_75242330_75244373	chr10	75242330	75244373	ENSMUSG00000092360.1	RP23-333M15.8	ENSMUST00000173512.1	protein_coding	-
chr10_75260255_75261584	chr10	75260255	75261584	ENSMUSG00000001663.4	Gstt1	ENSMUST00000139724.1	protein_coding	-
chr10_75260255_75261584	chr10	75260255	75261584	ENSMUSG00000001663.4	Gstt1	ENSMUST00000120177.1	protein_coding	-
chr10_75260255_75261584	chr10	75260255	75261584	ENSMUSG00000001663.4	Gstt1	ENSMUST00000001713.3	protein_coding	-
chr10_75285146_75285471	chr10	75285146	75285471	ENSMUSG00000009093.7	Gstt4	ENSMUST00000159241.1	nonsense_mediated_decay	-
chr10_75285146_75285471	chr10	75285146	75285471	ENSMUSG00000009093.7	Gstt4	ENSMUST00000160211.1	protein_coding	-
chr10_75296825_75297604	chr10	75296825	75297604	ENSMUSG00000033318.6	Gstt2	ENSMUST00000038257.6	protein_coding	-
chr10_75321794_75323921	chr10	75321794	75323921	ENSMUSG00000033307.6	Mif	ENSMUST00000038169.6	protein_coding	-
chr10_75355503_75356483	chr10	75355503	75356483	ENSMUSG00000009092.4	Derl3	ENSMUST00000009236.4	protein_coding	+
chr10_75377473_75377794	chr10	75377473	75377794	ENSMUSG00000000902.6	Smarcb1	ENSMUST00000146555.1	nonsense_mediated_decay	-
chr10_75378887_75379134	chr10	75378887	75379134	ENSMUSG00000000902.6	Smarcb1	ENSMUST00000140408.1	retained_intron	-
chr10_75389221_75389491	chr10	75389221	75389491	ENSMUSG00000000901.8	Mmp11	ENSMUST00000152222.1	protein_coding	-
chr10_75394573_75395474	chr10	75394573	75395474	ENSMUSG00000000901.8	Mmp11	ENSMUST00000000924.6	protein_coding	-
chr10_75394573_75395474	chr10	75394573	75395474	ENSMUSG00000000901.8	Mmp11	ENSMUST00000120281.1	protein_coding	-
chr10_75397726_75399357	chr10	75397726	75399357	ENSMUSG00000049422.6	Chchd10	ENSMUST00000058906.6	protein_coding	+
chr10_75405553_75406029	chr10	75405553	75406029	ENSMUSG00000000903.3	Vpreb3	ENSMUST00000121151.1	protein_coding	+
chr10_75408523_75409082	chr10	75408523	75409082	ENSMUSG00000082234.1	Gm16221	ENSMUST00000117331.1	transcribed_processed_pseudogene	-
chr10_75410869_75411376	chr10	75410869	75411376	ENSMUSG00000000903.3	Vpreb3	ENSMUST00000000926.2	protein_coding	+
chr10_75414044_75415051	chr10	75414044	75415051	ENSMUSG00000092740.1	AC134382.1	ENSMUST00000174999.1	miRNA	+
chr10_75416798_75417708	chr10	75416798	75417708	ENSMUSG00000033255.7	Gm5134	ENSMUST00000099577.3	protein_coding	+
chr10_75416798_75417708	chr10	75416798	75417708	ENSMUSG00000033255.7	Gm5134	ENSMUST00000170203.1	protein_coding	+
chr10_75416798_75417708	chr10	75416798	75417708	ENSMUSG00000033255.7	Gm5134	ENSMUST00000037672.5	protein_coding	+
chr10_75494546_75496223	chr10	75494546	75496223	ENSMUSG00000049764.6	Zfp280b	ENSMUST00000166386.1	protein_coding	+
chr10_75494546_75496223	chr10	75494546	75496223	ENSMUSG00000049764.6	Zfp280b	ENSMUST00000061617.6	protein_coding	+
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000137857.1	nonsense_mediated_decay	-
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000169858.1	protein_coding	-
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000128099.1	nonsense_mediated_decay	-
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000099572.3	protein_coding	-
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000020452.5	protein_coding	-
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000105418.1	protein_coding	-
chr10_75700086_75701233	chr10	75700086	75701233	ENSMUSG00000020230.7	Prmt2	ENSMUST00000099571.3	protein_coding	-
chr10_75715772_75717130	chr10	75715772	75717130	ENSMUSG00000033208.7	S100b	ENSMUST00000036387.7	protein_coding	+
chr10_75755000_75755222	chr10	75755000	75755222	ENSMUSG00000020231.8	Dip2a	ENSMUST00000160442.1	nonsense_mediated_decay	-
chr10_75807417_75809277	chr10	75807417	75809277	ENSMUSG00000020231.8	Dip2a	ENSMUST00000162766.1	retained_intron	-
chr10_75807417_75809277	chr10	75807417	75809277	ENSMUSG00000020231.8	Dip2a	ENSMUST00000036033.7	protein_coding	-
chr10_75807417_75809277	chr10	75807417	75809277	ENSMUSG00000020231.8	Dip2a	ENSMUST00000105417.2	protein_coding	-
chr10_75807417_75809277	chr10	75807417	75809277	ENSMUSG00000020231.8	Dip2a	ENSMUST00000160048.1	protein_coding	-
chr10_75911564_75911903	chr10	75911564	75911903	ENSMUSG00000009114.10	2610028H24Rik	ENSMUST00000092406.5	protein_coding	+
chr10_75911564_75911903	chr10	75911564	75911903	ENSMUSG00000009114.10	2610028H24Rik	ENSMUST00000165085.1	protein_coding	+
chr10_75931052_75932340	chr10	75931052	75932340	ENSMUSG00000001150.5	Mcm3ap	ENSMUST00000001178.4	protein_coding	+
chr10_75931052_75932340	chr10	75931052	75932340	ENSMUSG00000001150.5	Mcm3ap	ENSMUST00000170795.1	protein_coding	+
chr10_75931052_75932340	chr10	75931052	75932340	ENSMUSG00000033126.4	Ybey	ENSMUST00000049185.4	protein_coding	-
chr10_75993506_75994923	chr10	75993506	75994923	ENSMUSG00000033105.6	Lss	ENSMUST00000159013.1	processed_transcript	+
chr10_75993506_75994923	chr10	75993506	75994923	ENSMUSG00000033105.6	Lss	ENSMUST00000162475.1	retained_intron	+
chr10_75993506_75994923	chr10	75993506	75994923	ENSMUSG00000033105.6	Lss	ENSMUST00000048678.6	protein_coding	+
chr10_75993506_75994923	chr10	75993506	75994923	ENSMUSG00000033105.6	Lss	ENSMUST00000160671.1	retained_intron	+
chr10_75993506_75994923	chr10	75993506	75994923	ENSMUSG00000033105.6	Lss	ENSMUST00000159172.1	retained_intron	+
chr10_76004127_76004488	chr10	76004127	76004488	ENSMUSG00000033105.6	Lss	ENSMUST00000163049.1	protein_coding	+
chr10_76013228_76013837	chr10	76013228	76013837	ENSMUSG00000033105.6	Lss	ENSMUST00000162848.1	retained_intron	+
chr10_76024824_76025238	chr10	76024824	76025238	ENSMUSG00000009115.5	1700027D21Rik	ENSMUST00000009259.4	protein_coding	+
chr10_76024824_76025238	chr10	76024824	76025238	ENSMUSG00000009115.5	1700027D21Rik	ENSMUST00000105414.1	protein_coding	+
chr10_76024824_76025238	chr10	76024824	76025238	ENSMUSG00000086241.2	4930483K19Rik	ENSMUST00000127576.2	antisense	-
chr10_76032463_76033487	chr10	76032463	76033487	ENSMUSG00000085468.1	Gm15343	ENSMUST00000136382.1	antisense	-
chr10_76037911_76039984	chr10	76037911	76039984	ENSMUSG00000001155.7	Ftcd	ENSMUST00000001183.7	protein_coding	+
chr10_76037911_76039984	chr10	76037911	76039984	ENSMUSG00000001155.7	Ftcd	ENSMUST00000137347.1	retained_intron	+
chr10_76085204_76086494	chr10	76085204	76086494	ENSMUSG00000020241.7	Col6a2	ENSMUST00000137365.1	retained_intron	-
chr10_76085204_76086494	chr10	76085204	76086494	ENSMUSG00000020241.7	Col6a2	ENSMUST00000105413.1	protein_coding	-
chr10_76085204_76086494	chr10	76085204	76086494	ENSMUSG00000020241.7	Col6a2	ENSMUST00000001181.6	protein_coding	-
chr10_76086545_76086891	chr10	76086545	76086891	ENSMUSG00000020241.7	Col6a2	ENSMUST00000001181.6	protein_coding	-
chr10_76188668_76189037	chr10	76188668	76189037	ENSMUSG00000001119.6	Col6a1	ENSMUST00000168127.1	protein_coding	-
chr10_76188668_76189037	chr10	76188668	76189037	ENSMUSG00000001119.6	Col6a1	ENSMUST00000001147.4	protein_coding	-
chr10_76188668_76189037	chr10	76188668	76189037	ENSMUSG00000001119.6	Col6a1	ENSMUST00000105412.1	protein_coding	-
chr10_76279125_76280106	chr10	76279125	76280106	ENSMUSG00000001120.8	Pcbp3	ENSMUST00000092393.5	nonsense_mediated_decay	-
chr10_76281979_76282515	chr10	76281979	76282515	ENSMUSG00000001120.8	Pcbp3	ENSMUST00000165571.1	processed_transcript	-
chr10_76368595_76368944	chr10	76368595	76368944	ENSMUSG00000001120.8	Pcbp3	ENSMUST00000171437.1	processed_transcript	-
chr10_76424027_76425628	chr10	76424027	76425628	ENSMUSG00000001120.8	Pcbp3	ENSMUST00000105411.2	protein_coding	-
chr10_76424027_76425628	chr10	76424027	76425628	ENSMUSG00000001120.8	Pcbp3	ENSMUST00000001148.4	protein_coding	-
chr10_76474144_76474895	chr10	76474144	76474895	ENSMUSG00000074919.2	Gm10787	ENSMUST00000099552.2	protein_coding	+
chr10_76494621_76495068	chr10	76494621	76495068	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000136150.1	protein_coding	+
chr10_76494621_76495068	chr10	76494621	76495068	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000133059.1	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000136150.1	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000133059.1	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000144234.1	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000105410.3	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000136925.1	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000130703.1	protein_coding	+
chr10_76495177_76497097	chr10	76495177	76497097	ENSMUSG00000001436.9	Slc19a1	ENSMUST00000132984.1	protein_coding	+
chr10_76551946_76552656	chr10	76551946	76552656	ENSMUSG00000001435.8	Col18a1	ENSMUST00000156009.1	protein_coding	-
chr10_76575924_76577272	chr10	76575924	76577272	ENSMUSG00000001435.8	Col18a1	ENSMUST00000149744.1	protein_coding	-
chr10_76575924_76577272	chr10	76575924	76577272	ENSMUSG00000001435.8	Col18a1	ENSMUST00000105409.1	protein_coding	-
chr10_76575924_76577272	chr10	76575924	76577272	ENSMUSG00000001435.8	Col18a1	ENSMUST00000072755.4	protein_coding	-
chr10_76628184_76629506	chr10	76628184	76629506	ENSMUSG00000001435.8	Col18a1	ENSMUST00000081654.6	protein_coding	-
chr10_76802630_76803159	chr10	76802630	76803159	ENSMUSG00000020262.9	Adarb1	ENSMUST00000146319.1	retained_intron	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000156583.1	retained_intron	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000150512.1	retained_intron	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000150227.1	retained_intron	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000154607.1	retained_intron	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000149738.1	retained_intron	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000105406.1	protein_coding	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000105404.2	nonsense_mediated_decay	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000144547.1	nonsense_mediated_decay	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000126073.1	nonsense_mediated_decay	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000020496.7	protein_coding	-
chr10_76879518_76881656	chr10	76879518	76881656	ENSMUSG00000020262.9	Adarb1	ENSMUST00000098374.2	protein_coding	-
chr10_76977988_76980344	chr10	76977988	76980344	ENSMUSG00000032977.7	1810008A18Rik	ENSMUST00000099540.2	protein_coding	-
chr10_76977988_76980344	chr10	76977988	76980344	ENSMUSG00000032977.7	1810008A18Rik	ENSMUST00000045454.7	protein_coding	-
chr10_76992603_76994877	chr10	76992603	76994877	ENSMUSG00000000290.7	Itgb2	ENSMUST00000000299.7	protein_coding	+
chr10_76992603_76994877	chr10	76992603	76994877	ENSMUSG00000000290.7	Itgb2	ENSMUST00000131023.1	protein_coding	+
chr10_76992603_76994877	chr10	76992603	76994877	ENSMUSG00000000290.7	Itgb2	ENSMUST00000130059.1	protein_coding	+
chr10_76992603_76994877	chr10	76992603	76994877	ENSMUSG00000000290.7	Itgb2	ENSMUST00000156644.1	nonsense_mediated_decay	+
chr10_76992603_76994877	chr10	76992603	76994877	ENSMUSG00000000290.7	Itgb2	ENSMUST00000153541.1	nonsense_mediated_decay	+
chr10_77046697_77047069	chr10	77046697	77047069	ENSMUSG00000009291.6	Pttg1ip	ENSMUST00000161165.1	protein_coding	+
chr10_77067903_77070468	chr10	77067903	77070468	ENSMUSG00000020265.9	Sumo3	ENSMUST00000020501.8	protein_coding	+
chr10_77067903_77070468	chr10	77067903	77070468	ENSMUSG00000020265.9	Sumo3	ENSMUST00000174113.1	nonsense_mediated_decay	+
chr10_77067903_77070468	chr10	77067903	77070468	ENSMUSG00000020265.9	Sumo3	ENSMUST00000137841.2	nonsense_mediated_decay	+
chr10_77067903_77070468	chr10	77067903	77070468	ENSMUSG00000020265.9	Sumo3	ENSMUST00000129492.1	protein_coding	+
chr10_77067903_77070468	chr10	77067903	77070468	ENSMUSG00000020265.9	Sumo3	ENSMUST00000141228.2	protein_coding	+
chr10_77067903_77070468	chr10	77067903	77070468	ENSMUSG00000020265.9	Sumo3	ENSMUST00000099538.5	protein_coding	+
chr10_77075915_77076792	chr10	77075915	77076792	ENSMUSG00000020265.9	Sumo3	ENSMUST00000124024.2	protein_coding	+
chr10_77084388_77085601	chr10	77084388	77085601	ENSMUSG00000009293.10	Ube2g2	ENSMUST00000174510.1	protein_coding	+
chr10_77084388_77085601	chr10	77084388	77085601	ENSMUSG00000009293.10	Ube2g2	ENSMUST00000172813.1	protein_coding	+
chr10_77084388_77085601	chr10	77084388	77085601	ENSMUSG00000009293.10	Ube2g2	ENSMUST00000174546.1	nonsense_mediated_decay	+
chr10_77084388_77085601	chr10	77084388	77085601	ENSMUSG00000009293.10	Ube2g2	ENSMUST00000009437.9	protein_coding	+
chr10_77084388_77085601	chr10	77084388	77085601	ENSMUSG00000009293.10	Ube2g2	ENSMUST00000172772.1	protein_coding	+
chr10_77326852_77327802	chr10	77326852	77327802	ENSMUSG00000069581.5	C330046G03Rik	ENSMUST00000125241.1	retained_intron	+
chr10_77326852_77327802	chr10	77326852	77327802	ENSMUSG00000069581.5	C330046G03Rik	ENSMUST00000092366.2	protein_coding	+
chr10_77362799_77366534	chr10	77362799	77366534	ENSMUSG00000051652.4	Lrrc3	ENSMUST00000057608.4	protein_coding	-
chr10_77383740_77384439	chr10	77383740	77384439	ENSMUSG00000009292.9	Trpm2	ENSMUST00000138238.1	retained_intron	-
chr10_77432203_77433690	chr10	77432203	77433690	ENSMUSG00000009292.9	Trpm2	ENSMUST00000154996.1	processed_transcript	-
chr10_77432203_77433690	chr10	77432203	77433690	ENSMUSG00000009292.9	Trpm2	ENSMUST00000105399.1	protein_coding	-
chr10_77432203_77433690	chr10	77432203	77433690	ENSMUSG00000009292.9	Trpm2	ENSMUST00000105401.2	protein_coding	-
chr10_77432203_77433690	chr10	77432203	77433690	ENSMUSG00000009292.9	Trpm2	ENSMUST00000020505.6	protein_coding	-
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000105397.3	protein_coding	+
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000020526.8	protein_coding	+
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000149074.1	retained_intron	+
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000123999.1	retained_intron	+
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000105398.1	protein_coding	+
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000136275.1	retained_intron	+
chr10_77440729_77441925	chr10	77440729	77441925	ENSMUSG00000020284.9	1810043G02Rik	ENSMUST00000130949.1	processed_transcript	+
chr10_77471468_77472983	chr10	77471468	77472983	ENSMUSG00000020277.8	Pfkl	ENSMUST00000145716.1	processed_transcript	-
chr10_77471468_77472983	chr10	77471468	77472983	ENSMUSG00000020277.8	Pfkl	ENSMUST00000020522.8	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000154374.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000143735.1	nonsense_mediated_decay	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000105395.2	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000156417.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000105396.2	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000155021.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000140636.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000148469.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000019257.8	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000131028.1	nonsense_mediated_decay	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000145975.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000130972.1	protein_coding	-
chr10_77505343_77506880	chr10	77505343	77506880	ENSMUSG00000000731.9	Aire	ENSMUST00000128241.1	protein_coding	-
chr10_77517066_77518196	chr10	77517066	77518196	ENSMUSG00000000730.7	Dnmt3l	ENSMUST00000144446.1	retained_intron	+
chr10_77517066_77518196	chr10	77517066	77518196	ENSMUSG00000000730.7	Dnmt3l	ENSMUST00000131825.1	protein_coding	+
chr10_77517066_77518196	chr10	77517066	77518196	ENSMUSG00000000730.7	Dnmt3l	ENSMUST00000139539.1	protein_coding	+
chr10_77517066_77518196	chr10	77517066	77518196	ENSMUSG00000000730.7	Dnmt3l	ENSMUST00000123940.1	protein_coding	+
chr10_77531324_77533014	chr10	77531324	77533014	ENSMUSG00000000732.7	Icosl	ENSMUST00000095482.3	protein_coding	+
chr10_77531324_77533014	chr10	77531324	77533014	ENSMUSG00000000732.7	Icosl	ENSMUST00000105393.1	protein_coding	+
chr10_77631898_77633330	chr10	77631898	77633330	ENSMUSG00000053329.6	D10Jhu81e	ENSMUST00000001242.7	protein_coding	-
chr10_77647267_77648690	chr10	77647267	77648690	ENSMUSG00000032834.9	Pwp2	ENSMUST00000042556.9	protein_coding	-
chr10_77647267_77648690	chr10	77647267	77648690	ENSMUSG00000032834.9	Pwp2	ENSMUST00000105392.2	protein_coding	-
chr10_77706325_77708374	chr10	77706325	77708374	ENSMUSG00000000374.7	Trappc10	ENSMUST00000000384.6	protein_coding	-
chr10_77759243_77761993	chr10	77759243	77761993	ENSMUSG00000001211.8	Agpat3	ENSMUST00000105389.1	protein_coding	-
chr10_77782572_77783277	chr10	77782572	77783277	ENSMUSG00000001211.8	Agpat3	ENSMUST00000139282.1	protein_coding	-
chr10_77783331_77783653	chr10	77783331	77783653	ENSMUSG00000001211.8	Agpat3	ENSMUST00000139282.1	protein_coding	-
chr10_77813404_77816293	chr10	77813404	77816293	ENSMUSG00000001211.8	Agpat3	ENSMUST00000146899.1	protein_coding	-
chr10_77813404_77816293	chr10	77813404	77816293	ENSMUSG00000001211.8	Agpat3	ENSMUST00000138035.1	protein_coding	-
chr10_77813404_77816293	chr10	77813404	77816293	ENSMUSG00000001211.8	Agpat3	ENSMUST00000105388.1	protein_coding	-
chr10_77813404_77816293	chr10	77813404	77816293	ENSMUSG00000001211.8	Agpat3	ENSMUST00000105390.1	protein_coding	-
chr10_77813404_77816293	chr10	77813404	77816293	ENSMUSG00000001211.8	Agpat3	ENSMUST00000166360.1	protein_coding	-
chr10_77813404_77816293	chr10	77813404	77816293	ENSMUSG00000001211.8	Agpat3	ENSMUST00000001240.5	protein_coding	-
chr10_77887923_77889448	chr10	77887923	77889448	ENSMUSG00000005054.6	Cstb	ENSMUST00000005185.6	protein_coding	+
chr10_77925885_77928645	chr10	77925885	77928645	ENSMUSG00000032788.8	Pdxk	ENSMUST00000105385.1	protein_coding	-
chr10_77925885_77928645	chr10	77925885	77928645	ENSMUSG00000032788.8	Pdxk	ENSMUST00000041616.8	protein_coding	-
chr10_77950157_77951032	chr10	77950157	77951032	ENSMUSG00000055704.4	Gm9978	ENSMUST00000069431.4	protein_coding	-
chr10_78036772_78038318	chr10	78036772	78038318	ENSMUSG00000032763.9	Ilvbl	ENSMUST00000105384.3	protein_coding	+
chr10_78036772_78038318	chr10	78036772	78038318	ENSMUSG00000032763.9	Ilvbl	ENSMUST00000172436.1	protein_coding	+
chr10_78053441_78055287	chr10	78053441	78055287	ENSMUSG00000032714.6	Syde1	ENSMUST00000040580.6	protein_coding	-
chr10_78080734_78081349	chr10	78080734	78081349	ENSMUSG00000071185.2	Olfr1357	ENSMUST00000095473.2	protein_coding	-
chr10_78180926_78181280	chr10	78180926	78181280	ENSMUSG00000005355.7	Casp14	ENSMUST00000005488.7	protein_coding	-
chr10_78180926_78181280	chr10	78180926	78181280	ENSMUSG00000005355.7	Casp14	ENSMUST00000165019.1	protein_coding	-
chr10_78214847_78216118	chr10	78214847	78216118	ENSMUSG00000078442.2	Ccdc105	ENSMUST00000105383.2	protein_coding	-
chr10_78242045_78244307	chr10	78242045	78244307	ENSMUSG00000005357.8	Slc1a6	ENSMUST00000005490.8	protein_coding	+
chr10_78559249_78560743	chr10	78559249	78560743	ENSMUSG00000060301.5	2610008E11Rik	ENSMUST00000039271.6	protein_coding	-
chr10_78931418_78931649	chr10	78931418	78931649	ENSMUSG00000091381.2	Vmn2r83	ENSMUST00000167976.2	protein_coding	+
chr10_78995175_78996741	chr10	78995175	78996741	ENSMUSG00000052151.5	Ppap2c	ENSMUST00000165233.1	nonsense_mediated_decay	-
chr10_78995175_78996741	chr10	78995175	78996741	ENSMUSG00000052151.5	Ppap2c	ENSMUST00000166804.1	protein_coding	-
chr10_78995175_78996741	chr10	78995175	78996741	ENSMUSG00000052151.5	Ppap2c	ENSMUST00000163602.1	processed_transcript	-
chr10_78995175_78996741	chr10	78995175	78996741	ENSMUSG00000052151.5	Ppap2c	ENSMUST00000063879.5	protein_coding	-
chr10_79004227_79005130	chr10	79004227	79005130	ENSMUSG00000042570.8	Mier2	ENSMUST00000168601.1	retained_intron	-
chr10_79004227_79005130	chr10	79004227	79005130	ENSMUSG00000091854.1	Mier2	ENSMUST00000172158.1	protein_coding	-
chr10_79006961_79007209	chr10	79006961	79007209	ENSMUSG00000042570.8	Mier2	ENSMUST00000170950.1	processed_transcript	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000167689.1	protein_coding	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000170018.1	protein_coding	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000165778.1	protein_coding	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000164895.1	protein_coding	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000167183.1	nonsense_mediated_decay	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000062855.8	protein_coding	-
chr10_79016719_79018544	chr10	79016719	79018544	ENSMUSG00000042570.8	Mier2	ENSMUST00000165028.1	protein_coding	-
chr10_79042639_79043230	chr10	79042639	79043230	ENSMUSG00000020317.8	Theg	ENSMUST00000159782.1	retained_intron	-
chr10_79049744_79050057	chr10	79049744	79050057	ENSMUSG00000020317.8	Theg	ENSMUST00000020566.6	protein_coding	-
chr10_79049744_79050057	chr10	79049744	79050057	ENSMUSG00000020317.8	Theg	ENSMUST00000077433.6	protein_coding	-
chr10_79076297_79077497	chr10	79076297	79077497	ENSMUSG00000045912.7	C2cd4c	ENSMUST00000059699.7	protein_coding	-
chr10_79099346_79102099	chr10	79099346	79102099	ENSMUSG00000020312.5	Shc2	ENSMUST00000020564.5	protein_coding	-
chr10_79099346_79102099	chr10	79099346	79102099	ENSMUSG00000020312.5	Shc2	ENSMUST00000163867.1	protein_coding	-
chr10_79126645_79127164	chr10	79126645	79127164	ENSMUSG00000020310.7	Madcam1	ENSMUST00000020554.6	protein_coding	+
chr10_79126645_79127164	chr10	79126645	79127164	ENSMUSG00000020310.7	Madcam1	ENSMUST00000105382.1	protein_coding	+
chr10_79131251_79133111	chr10	79131251	79133111	ENSMUSG00000020308.5	Gm16517	ENSMUST00000020552.5	protein_coding	+
chr10_79143935_79146416	chr10	79143935	79146416	ENSMUSG00000020307.8	Cdc34	ENSMUST00000020550.5	protein_coding	+
chr10_79143935_79146416	chr10	79143935	79146416	ENSMUSG00000020307.8	Cdc34	ENSMUST00000166603.1	protein_coding	+
chr10_79151772_79152212	chr10	79151772	79152212	ENSMUSG00000054206.2	Gzmm	ENSMUST00000020549.3	protein_coding	+
chr10_79166726_79168090	chr10	79166726	79168090	ENSMUSG00000023175.8	Bsg	ENSMUST00000067036.4	protein_coding	+
chr10_79166726_79168090	chr10	79166726	79168090	ENSMUSG00000023175.8	Bsg	ENSMUST00000105381.3	protein_coding	+
chr10_79178821_79179494	chr10	79178821	79179494	ENSMUSG00000020331.3	Hcn2	ENSMUST00000099513.1	protein_coding	+
chr10_79178821_79179494	chr10	79178821	79179494	ENSMUSG00000020331.3	Hcn2	ENSMUST00000020581.2	protein_coding	+
chr10_79201063_79201345	chr10	79201063	79201345	ENSMUSG00000020329.6	Polrmt	ENSMUST00000162687.1	retained_intron	-
chr10_79208713_79209970	chr10	79208713	79209970	ENSMUSG00000020329.6	Polrmt	ENSMUST00000161375.1	processed_transcript	-
chr10_79208713_79209970	chr10	79208713	79209970	ENSMUSG00000020329.6	Polrmt	ENSMUST00000162694.1	nonsense_mediated_decay	-
chr10_79208713_79209970	chr10	79208713	79209970	ENSMUSG00000020329.6	Polrmt	ENSMUST00000020580.6	protein_coding	-
chr10_79208713_79209970	chr10	79208713	79209970	ENSMUSG00000020329.6	Polrmt	ENSMUST00000159016.1	protein_coding	-
chr10_79208713_79209970	chr10	79208713	79209970	ENSMUSG00000020329.6	Polrmt	ENSMUST00000159082.1	retained_intron	-
chr10_79208713_79209970	chr10	79208713	79209970	ENSMUSG00000020329.6	Polrmt	ENSMUST00000161765.1	retained_intron	-
chr10_79217459_79218585	chr10	79217459	79218585	ENSMUSG00000020327.2	Fgf22	ENSMUST00000170493.1	protein_coding	+
chr10_79217459_79218585	chr10	79217459	79218585	ENSMUSG00000020327.2	Fgf22	ENSMUST00000020577.2	protein_coding	+
chr10_79229089_79231487	chr10	79229089	79231487	ENSMUSG00000035890.7	Rnf126	ENSMUST00000047203.7	protein_coding	-
chr10_79242537_79243980	chr10	79242537	79243980	ENSMUSG00000020325.9	Fstl3	ENSMUST00000168798.1	processed_transcript	+
chr10_79247067_79247560	chr10	79247067	79247560	ENSMUSG00000020323.8	Prss57	ENSMUST00000171681.1	protein_coding	-
chr10_79247067_79247560	chr10	79247067	79247560	ENSMUSG00000020323.8	Prss57	ENSMUST00000167987.1	protein_coding	-
chr10_79250966_79251932	chr10	79250966	79251932	ENSMUSG00000020323.8	Prss57	ENSMUST00000020573.6	protein_coding	-
chr10_79253499_79253699	chr10	79253499	79253699	ENSMUSG00000020323.8	Prss57	ENSMUST00000169684.1	protein_coding	-
chr10_79255677_79258034	chr10	79255677	79258034	ENSMUSG00000035863.7	Palm	ENSMUST00000046945.6	protein_coding	+
chr10_79255677_79258034	chr10	79255677	79258034	ENSMUSG00000035863.7	Palm	ENSMUST00000105379.2	protein_coding	+
chr10_79283487_79283957	chr10	79283487	79283957	ENSMUSG00000035852.4	9130017N09Rik	ENSMUST00000169041.1	protein_coding	+
chr10_79284815_79285509	chr10	79284815	79285509	ENSMUSG00000035852.4	9130017N09Rik	ENSMUST00000046833.4	protein_coding	+
chr10_79321214_79321445	chr10	79321214	79321445	ENSMUSG00000006498.9	Ptbp1	ENSMUST00000169091.1	protein_coding	+
chr10_79322424_79322686	chr10	79322424	79322686	ENSMUSG00000006498.9	Ptbp1	ENSMUST00000165724.1	nonsense_mediated_decay	+
chr10_79323835_79325022	chr10	79323835	79325022	ENSMUSG00000006498.9	Ptbp1	ENSMUST00000164385.1	retained_intron	+
chr10_79323835_79325022	chr10	79323835	79325022	ENSMUSG00000006498.9	Ptbp1	ENSMUST00000169580.1	retained_intron	+
chr10_79327253_79329157	chr10	79327253	79329157	ENSMUSG00000090860.1	Gm17134	ENSMUST00000166593.1	antisense	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000057729.6	Prtn3	ENSMUST00000163188.1	processed_transcript	+
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000166023.1	protein_coding	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000167707.1	protein_coding	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000163111.1	processed_transcript	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000165601.1	protein_coding	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000167897.1	protein_coding	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000113452.2	retained_intron	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000166057.1	retained_intron	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000092325.4	protein_coding	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000046458.6	protein_coding	-
chr10_79336389_79337835	chr10	79336389	79337835	ENSMUSG00000035835.7	BC005764	ENSMUST00000167250.1	protein_coding	-
chr10_79343585_79343790	chr10	79343585	79343790	ENSMUSG00000057729.6	Prtn3	ENSMUST00000165982.1	retained_intron	+
chr10_79343585_79343790	chr10	79343585	79343790	ENSMUSG00000057729.6	Prtn3	ENSMUST00000164134.1	retained_intron	+
chr10_79343585_79343790	chr10	79343585	79343790	ENSMUSG00000057729.6	Prtn3	ENSMUST00000166201.1	protein_coding	+
chr10_79343894_79344205	chr10	79343894	79344205	ENSMUSG00000057729.6	Prtn3	ENSMUST00000165982.1	retained_intron	+
chr10_79343894_79344205	chr10	79343894	79344205	ENSMUSG00000057729.6	Prtn3	ENSMUST00000164134.1	retained_intron	+
chr10_79343894_79344205	chr10	79343894	79344205	ENSMUSG00000057729.6	Prtn3	ENSMUST00000166201.1	protein_coding	+
chr10_79348943_79349347	chr10	79348943	79349347	ENSMUSG00000020125.6	Elane	ENSMUST00000046091.5	protein_coding	+
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000075854.1	U6	ENSMUST00000101905.1	snRNA	+
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000170409.1	protein_coding	-
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000166964.1	protein_coding	-
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000164705.1	protein_coding	-
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000163125.1	retained_intron	-
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000165684.1	protein_coding	-
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000105378.2	protein_coding	-
chr10_79370883_79372368	chr10	79370883	79372368	ENSMUSG00000013833.8	Med16	ENSMUST00000045844.8	protein_coding	-
chr10_79378853_79380327	chr10	79378853	79380327	ENSMUSG00000035773.4	Kiss1r	ENSMUST00000045529.2	protein_coding	+
chr10_79378853_79380327	chr10	79378853	79380327	ENSMUSG00000035781.7	C030046I01Rik	ENSMUST00000171416.1	protein_coding	-
chr10_79378853_79380327	chr10	79378853	79380327	ENSMUSG00000035781.7	C030046I01Rik	ENSMUST00000045628.7	protein_coding	-
chr10_79380970_79381275	chr10	79380970	79381275	ENSMUSG00000035773.4	Kiss1r	ENSMUST00000171725.1	protein_coding	+
chr10_79387991_79390764	chr10	79387991	79390764	ENSMUSG00000019564.6	Arid3a	ENSMUST00000019708.5	protein_coding	+
chr10_79387991_79390764	chr10	79387991	79390764	ENSMUSG00000019564.6	Arid3a	ENSMUST00000105377.1	protein_coding	+
chr10_79387991_79390764	chr10	79387991	79390764	ENSMUSG00000019564.6	Arid3a	ENSMUST00000105376.1	protein_coding	+
chr10_79392908_79393164	chr10	79392908	79393164	ENSMUSG00000019564.6	Arid3a	ENSMUST00000131118.1	protein_coding	+
chr10_79407906_79409146	chr10	79407906	79409146	ENSMUSG00000019564.6	Arid3a	ENSMUST00000135005.1	processed_transcript	+
chr10_79422433_79423623	chr10	79422433	79423623	ENSMUSG00000035754.7	Wdr18	ENSMUST00000045247.7	protein_coding	+
chr10_79433441_79434122	chr10	79433441	79434122	ENSMUSG00000035745.2	Grin3b	ENSMUST00000045085.1	protein_coding	+
chr10_79446147_79446796	chr10	79446147	79446796	ENSMUSG00000013858.7	ORF61	ENSMUST00000124536.1	protein_coding	-
chr10_79446918_79448987	chr10	79446918	79448987	ENSMUSG00000075986.1	U6	ENSMUST00000102032.1	snRNA	+
chr10_79446918_79448987	chr10	79446918	79448987	ENSMUSG00000013858.7	ORF61	ENSMUST00000124536.1	protein_coding	-
chr10_79446918_79448987	chr10	79446918	79448987	ENSMUSG00000013858.7	ORF61	ENSMUST00000105375.1	protein_coding	-
chr10_79446918_79448987	chr10	79446918	79448987	ENSMUSG00000013858.7	ORF61	ENSMUST00000052885.7	protein_coding	-
chr10_79451197_79451473	chr10	79451197	79451473	ENSMUSG00000004665.4	Cnn2	ENSMUST00000004784.4	protein_coding	+
chr10_79451197_79451473	chr10	79451197	79451473	ENSMUSG00000004665.4	Cnn2	ENSMUST00000105374.1	protein_coding	+
chr10_79458661_79461040	chr10	79458661	79461040	ENSMUSG00000035722.9	Abca7	ENSMUST00000132517.1	protein_coding	+
chr10_79458661_79461040	chr10	79458661	79461040	ENSMUSG00000035722.9	Abca7	ENSMUST00000171637.1	protein_coding	+
chr10_79458661_79461040	chr10	79458661	79461040	ENSMUSG00000035722.9	Abca7	ENSMUST00000043866.7	protein_coding	+
chr10_79478997_79480931	chr10	79478997	79480931	ENSMUSG00000035697.8	Hmha1	ENSMUST00000099501.3	protein_coding	+
chr10_79478997_79480931	chr10	79478997	79480931	ENSMUSG00000035697.8	Hmha1	ENSMUST00000140974.1	retained_intron	+
chr10_79478997_79480931	chr10	79478997	79480931	ENSMUSG00000035697.8	Hmha1	ENSMUST00000105373.1	protein_coding	+
chr10_79499479_79500138	chr10	79499479	79500138	ENSMUSG00000004667.11	Polr2e	ENSMUST00000147507.1	retained_intron	-
chr10_79501885_79502906	chr10	79501885	79502906	ENSMUSG00000004667.11	Polr2e	ENSMUST00000165412.1	protein_coding	-
chr10_79501885_79502906	chr10	79501885	79502906	ENSMUSG00000004667.11	Polr2e	ENSMUST00000152843.1	retained_intron	-
chr10_79501885_79502906	chr10	79501885	79502906	ENSMUSG00000004667.11	Polr2e	ENSMUST00000131743.1	retained_intron	-
chr10_79501885_79502906	chr10	79501885	79502906	ENSMUSG00000004667.11	Polr2e	ENSMUST00000004786.9	protein_coding	-
chr10_79501885_79502906	chr10	79501885	79502906	ENSMUSG00000004667.11	Polr2e	ENSMUST00000143438.1	retained_intron	-
chr10_79509879_79510307	chr10	79509879	79510307	ENSMUSG00000075706.3	Gpx4	ENSMUST00000144698.1	processed_transcript	+
chr10_79514361_79517586	chr10	79514361	79517586	ENSMUSG00000075706.3	Gpx4	ENSMUST00000105372.1	protein_coding	+
chr10_79514361_79517586	chr10	79514361	79517586	ENSMUSG00000075706.3	Gpx4	ENSMUST00000145703.1	processed_transcript	+
chr10_79514361_79517586	chr10	79514361	79517586	ENSMUSG00000075706.3	Gpx4	ENSMUST00000097227.3	protein_coding	+
chr10_79537392_79538473	chr10	79537392	79538473	ENSMUSG00000035673.8	Sbno2	ENSMUST00000092316.4	protein_coding	-
chr10_79565091_79566184	chr10	79565091	79566184	ENSMUSG00000035673.8	Sbno2	ENSMUST00000042771.7	protein_coding	-
chr10_79576995_79578992	chr10	79576995	79578992	ENSMUSG00000003068.8	Stk11	ENSMUST00000144883.1	nonsense_mediated_decay	+
chr10_79576995_79578992	chr10	79576995	79578992	ENSMUSG00000003068.8	Stk11	ENSMUST00000003152.7	protein_coding	+
chr10_79576995_79578992	chr10	79576995	79578992	ENSMUSG00000003068.8	Stk11	ENSMUST00000099495.3	protein_coding	+
chr10_79576995_79578992	chr10	79576995	79578992	ENSMUSG00000003068.8	Stk11	ENSMUST00000105371.2	nonsense_mediated_decay	+
chr10_79576995_79578992	chr10	79576995	79578992	ENSMUSG00000003068.8	Stk11	ENSMUST00000128992.1	processed_transcript	+
chr10_79598509_79598776	chr10	79598509	79598776	ENSMUSG00000035640.11	Dos	ENSMUST00000132317.1	retained_intron	-
chr10_79599793_79600002	chr10	79599793	79600002	ENSMUSG00000035640.11	Dos	ENSMUST00000128465.1	processed_transcript	-
chr10_79599793_79600002	chr10	79599793	79600002	ENSMUSG00000035640.11	Dos	ENSMUST00000169546.1	protein_coding	-
chr10_79600430_79601062	chr10	79600430	79601062	ENSMUSG00000035640.11	Dos	ENSMUST00000127515.1	retained_intron	-
chr10_79600430_79601062	chr10	79600430	79601062	ENSMUSG00000035640.11	Dos	ENSMUST00000136260.1	retained_intron	-
chr10_79600430_79601062	chr10	79600430	79601062	ENSMUSG00000035640.11	Dos	ENSMUST00000128488.1	processed_transcript	-
chr10_79600430_79601062	chr10	79600430	79601062	ENSMUSG00000035640.11	Dos	ENSMUST00000149242.1	processed_transcript	-
chr10_79601195_79601588	chr10	79601195	79601588	ENSMUSG00000003072.9	Atp5d	ENSMUST00000150347.1	processed_transcript	+
chr10_79601195_79601588	chr10	79601195	79601588	ENSMUSG00000035640.11	Dos	ENSMUST00000138776.1	processed_transcript	-
chr10_79601844_79602306	chr10	79601844	79602306	ENSMUSG00000035640.11	Dos	ENSMUST00000123967.1	nonsense_mediated_decay	-
chr10_79601844_79602306	chr10	79601844	79602306	ENSMUSG00000035640.11	Dos	ENSMUST00000132523.1	nonsense_mediated_decay	-
chr10_79601844_79602306	chr10	79601844	79602306	ENSMUSG00000035640.11	Dos	ENSMUST00000105369.1	protein_coding	-
chr10_79601844_79602306	chr10	79601844	79602306	ENSMUSG00000035640.11	Dos	ENSMUST00000147778.2	nonsense_mediated_decay	-
chr10_79601844_79602306	chr10	79601844	79602306	ENSMUSG00000035640.11	Dos	ENSMUST00000170219.1	protein_coding	-
chr10_79603869_79605611	chr10	79603869	79605611	ENSMUSG00000003072.9	Atp5d	ENSMUST00000105367.1	protein_coding	+
chr10_79603869_79605611	chr10	79603869	79605611	ENSMUSG00000003072.9	Atp5d	ENSMUST00000003156.8	protein_coding	+
chr10_79603869_79605611	chr10	79603869	79605611	ENSMUSG00000003072.9	Atp5d	ENSMUST00000105366.1	protein_coding	+
chr10_79610518_79613604	chr10	79610518	79613604	ENSMUSG00000035621.7	Midn	ENSMUST00000099492.3	protein_coding	+
chr10_79610518_79613604	chr10	79610518	79613604	ENSMUSG00000035621.7	Midn	ENSMUST00000042057.5	protein_coding	+
chr10_79610518_79613604	chr10	79610518	79613604	ENSMUSG00000035621.7	Midn	ENSMUST00000151202.1	protein_coding	+
chr10_79610518_79613604	chr10	79610518	79613604	ENSMUSG00000035621.7	Midn	ENSMUST00000124179.1	processed_transcript	+
chr10_79610518_79613604	chr10	79610518	79613604	ENSMUSG00000035621.7	Midn	ENSMUST00000153477.1	protein_coding	+
chr10_79613733_79615367	chr10	79613733	79615367	ENSMUSG00000035621.7	Midn	ENSMUST00000146516.1	protein_coding	+
chr10_79613733_79615367	chr10	79613733	79615367	ENSMUSG00000035621.7	Midn	ENSMUST00000144526.1	protein_coding	+
chr10_79630006_79631470	chr10	79630006	79631470	ENSMUSG00000045193.7	Cirbp	ENSMUST00000105365.2	protein_coding	+
chr10_79630006_79631470	chr10	79630006	79631470	ENSMUSG00000045193.7	Cirbp	ENSMUST00000054666.6	protein_coding	+
chr10_79630006_79631470	chr10	79630006	79631470	ENSMUSG00000045193.7	Cirbp	ENSMUST00000139935.1	retained_intron	+
chr10_79630006_79631470	chr10	79630006	79631470	ENSMUSG00000045193.7	Cirbp	ENSMUST00000140774.1	retained_intron	+
chr10_79635373_79636555	chr10	79635373	79636555	ENSMUSG00000035595.6	1600002K03Rik	ENSMUST00000041882.6	protein_coding	+
chr10_79641684_79642961	chr10	79641684	79642961	ENSMUSG00000003070.6	Efna2	ENSMUST00000003154.6	protein_coding	+
chr10_79688675_79691098	chr10	79688675	79691098	ENSMUSG00000020156.10	Mum1	ENSMUST00000020365.8	protein_coding	+
chr10_79688675_79691098	chr10	79688675	79691098	ENSMUSG00000020156.10	Mum1	ENSMUST00000125784.1	retained_intron	+
chr10_79688675_79691098	chr10	79688675	79691098	ENSMUSG00000020156.10	Mum1	ENSMUST00000130260.1	protein_coding	+
chr10_79688675_79691098	chr10	79688675	79691098	ENSMUSG00000020156.10	Mum1	ENSMUST00000141962.1	retained_intron	+
chr10_79688675_79691098	chr10	79688675	79691098	ENSMUSG00000020156.10	Mum1	ENSMUST00000139431.1	retained_intron	+
chr10_79698943_79699449	chr10	79698943	79699449	ENSMUSG00000020156.10	Mum1	ENSMUST00000136208.1	retained_intron	+
chr10_79705354_79705688	chr10	79705354	79705688	ENSMUSG00000020156.10	Mum1	ENSMUST00000136791.1	processed_transcript	+
chr10_79722609_79724761	chr10	79722609	79724761	ENSMUSG00000069565.6	Dazap1	ENSMUST00000156935.1	protein_coding	+
chr10_79722609_79724761	chr10	79722609	79724761	ENSMUSG00000020150.7	Gamt	ENSMUST00000148615.1	retained_intron	-
chr10_79722609_79724761	chr10	79722609	79724761	ENSMUSG00000020150.7	Gamt	ENSMUST00000020359.6	protein_coding	-
chr10_79722609_79724761	chr10	79722609	79724761	ENSMUSG00000020150.7	Gamt	ENSMUST00000105363.1	protein_coding	-
chr10_79727057_79728100	chr10	79727057	79728100	ENSMUSG00000069565.6	Dazap1	ENSMUST00000105362.1	protein_coding	+
chr10_79727057_79728100	chr10	79727057	79728100	ENSMUSG00000069565.6	Dazap1	ENSMUST00000105361.3	protein_coding	+
chr10_79727057_79728100	chr10	79727057	79728100	ENSMUSG00000069565.6	Dazap1	ENSMUST00000092305.5	protein_coding	+
chr10_79727057_79728100	chr10	79727057	79728100	ENSMUSG00000069565.6	Dazap1	ENSMUST00000150328.1	processed_transcript	+
chr10_79743796_79746613	chr10	79743796	79746613	ENSMUSG00000069565.6	Dazap1	ENSMUST00000151619.1	retained_intron	+
chr10_79743796_79746613	chr10	79743796	79746613	ENSMUSG00000087672.1	Gm15122	ENSMUST00000135434.1	antisense	-
chr10_79754918_79755710	chr10	79754918	79755710	ENSMUSG00000063457.7	Rps15	ENSMUST00000077945.5	protein_coding	+
chr10_79754918_79755710	chr10	79754918	79755710	ENSMUSG00000063457.7	Rps15	ENSMUST00000068408.7	protein_coding	+
chr10_79754918_79755710	chr10	79754918	79755710	ENSMUSG00000063457.7	Rps15	ENSMUST00000062674.6	protein_coding	+
chr10_79758143_79759115	chr10	79758143	79759115	ENSMUSG00000020135.7	Apc2	ENSMUST00000105359.1	protein_coding	+
chr10_79761447_79762711	chr10	79761447	79762711	ENSMUSG00000020135.7	Apc2	ENSMUST00000154212.1	protein_coding	+
chr10_79782935_79784086	chr10	79782935	79784086	ENSMUSG00000020133.8	2310011J03Rik	ENSMUST00000020341.8	protein_coding	-
chr10_79785534_79787187	chr10	79785534	79787187	ENSMUSG00000020131.8	Pcsk4	ENSMUST00000147132.1	retained_intron	-
chr10_79785534_79787187	chr10	79785534	79787187	ENSMUSG00000020131.8	Pcsk4	ENSMUST00000130521.1	retained_intron	-
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000035504.10	Reep6	ENSMUST00000105358.1	protein_coding	+
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000035504.10	Reep6	ENSMUST00000105357.1	protein_coding	+
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000035504.10	Reep6	ENSMUST00000105354.1	protein_coding	+
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000035504.10	Reep6	ENSMUST00000105355.1	protein_coding	+
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000035504.10	Reep6	ENSMUST00000153167.1	retained_intron	+
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000035504.10	Reep6	ENSMUST00000040081.6	protein_coding	+
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000020131.8	Pcsk4	ENSMUST00000135071.1	nonsense_mediated_decay	-
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000020131.8	Pcsk4	ENSMUST00000137177.1	retained_intron	-
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000020131.8	Pcsk4	ENSMUST00000128653.1	nonsense_mediated_decay	-
chr10_79792020_79793245	chr10	79792020	79793245	ENSMUSG00000020131.8	Pcsk4	ENSMUST00000020340.8	protein_coding	-
chr10_79802660_79803554	chr10	79802660	79803554	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000137571.1	processed_transcript	-
chr10_79807841_79808162	chr10	79807841	79808162	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000138705.1	protein_coding	-
chr10_79807841_79808162	chr10	79807841	79808162	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000105353.2	protein_coding	-
chr10_79810324_79811628	chr10	79810324	79811628	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000105352.1	protein_coding	-
chr10_79810324_79811628	chr10	79810324	79811628	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000137576.1	retained_intron	-
chr10_79810324_79811628	chr10	79810324	79811628	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000095446.3	protein_coding	-
chr10_79810324_79811628	chr10	79810324	79811628	ENSMUSG00000043822.11	Adamtsl5	ENSMUST00000124789.1	retained_intron	-
chr10_79818210_79819442	chr10	79818210	79819442	ENSMUSG00000035486.8	Plk5	ENSMUST00000039836.8	protein_coding	+
chr10_79818210_79819442	chr10	79818210	79819442	ENSMUSG00000035486.8	Plk5	ENSMUST00000105351.1	protein_coding	+
chr10_79819503_79821428	chr10	79819503	79821428	ENSMUSG00000035486.8	Plk5	ENSMUST00000152544.1	retained_intron	+
chr10_79833952_79834833	chr10	79833952	79834833	ENSMUSG00000087432.1	Gm15123	ENSMUST00000138988.1	antisense	+
chr10_79833952_79834833	chr10	79833952	79834833	ENSMUSG00000085712.1	Gm15124	ENSMUST00000142053.1	antisense	+
chr10_79848914_79850215	chr10	79848914	79850215	ENSMUSG00000048696.9	Mex3d	ENSMUST00000099480.2	protein_coding	-
chr10_79848914_79850215	chr10	79848914	79850215	ENSMUSG00000048696.9	Mex3d	ENSMUST00000062946.6	protein_coding	-
chr10_79848914_79850215	chr10	79848914	79850215	ENSMUSG00000048696.9	Mex3d	ENSMUST00000105350.1	protein_coding	-
chr10_79850242_79851363	chr10	79850242	79851363	ENSMUSG00000048696.9	Mex3d	ENSMUST00000099480.2	protein_coding	-
chr10_79850242_79851363	chr10	79850242	79851363	ENSMUSG00000048696.9	Mex3d	ENSMUST00000062946.6	protein_coding	-
chr10_79850242_79851363	chr10	79850242	79851363	ENSMUSG00000048696.9	Mex3d	ENSMUST00000105350.1	protein_coding	-
chr10_79869138_79870482	chr10	79869138	79870482	ENSMUSG00000020163.6	Uqcr11	ENSMUST00000141683.1	processed_transcript	-
chr10_79869138_79870482	chr10	79869138	79870482	ENSMUSG00000020163.6	Uqcr11	ENSMUST00000138428.1	processed_transcript	-
chr10_79869138_79870482	chr10	79869138	79870482	ENSMUSG00000020163.6	Uqcr11	ENSMUST00000020372.5	protein_coding	-
chr10_79884465_79884933	chr10	79884465	79884933	ENSMUSG00000020167.8	Tcf3	ENSMUST00000156244.1	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000105340.1	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000020379.6	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000105346.3	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000020377.6	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000105342.1	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000105343.1	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000105344.1	protein_coding	-
chr10_79895723_79897295	chr10	79895723	79897295	ENSMUSG00000020167.8	Tcf3	ENSMUST00000105345.3	protein_coding	-
chr10_79957380_79957908	chr10	79957380	79957908	ENSMUSG00000045518.7	Onecut3	ENSMUST00000051773.7	protein_coding	+
chr10_80001481_80002453	chr10	80001481	80002453	ENSMUSG00000003341.7	Atp8b3	ENSMUST00000060793.7	protein_coding	-
chr10_80001481_80002453	chr10	80001481	80002453	ENSMUSG00000003341.7	Atp8b3	ENSMUST00000170528.1	protein_coding	-
chr10_80001481_80002453	chr10	80001481	80002453	ENSMUSG00000003341.7	Atp8b3	ENSMUST00000020383.4	protein_coding	-
chr10_80023203_80024936	chr10	80023203	80024936	ENSMUSG00000047417.9	Rexo1	ENSMUST00000051918.8	protein_coding	-
chr10_80023203_80024936	chr10	80023203	80024936	ENSMUSG00000047417.9	Rexo1	ENSMUST00000038670.8	protein_coding	-
chr10_80023203_80024936	chr10	80023203	80024936	ENSMUSG00000047417.9	Rexo1	ENSMUST00000057910.8	protein_coding	-
chr10_80039607_80042001	chr10	80039607	80042001	ENSMUSG00000079463.2	Gm17682	ENSMUST00000168473.1	lincRNA	+
chr10_80039607_80042001	chr10	80039607	80042001	ENSMUSG00000035397.7	Klf16	ENSMUST00000038558.7	protein_coding	-
chr10_80052064_80053747	chr10	80052064	80053747	ENSMUSG00000003346.7	Fam108a	ENSMUST00000095435.3	protein_coding	-
chr10_80052064_80053747	chr10	80052064	80053747	ENSMUSG00000003346.7	Fam108a	ENSMUST00000003436.5	protein_coding	-
chr10_80065217_80066454	chr10	80065217	80066454	ENSMUSG00000035370.6	Adat3	ENSMUST00000038411.4	protein_coding	+
chr10_80065217_80066454	chr10	80065217	80066454	ENSMUSG00000078441.3	Scamp4	ENSMUST00000079883.4	protein_coding	+
chr10_80092400_80093216	chr10	80092400	80093216	ENSMUSG00000003345.8	Csnk1g2	ENSMUST00000085435.5	protein_coding	+
chr10_80118712_80119959	chr10	80118712	80119959	ENSMUSG00000003344.8	Btbd2	ENSMUST00000131876.1	protein_coding	-
chr10_80118712_80119959	chr10	80118712	80119959	ENSMUSG00000003344.8	Btbd2	ENSMUST00000126980.1	protein_coding	-
chr10_80118712_80119959	chr10	80118712	80119959	ENSMUSG00000003344.8	Btbd2	ENSMUST00000003434.7	protein_coding	-
chr10_80144659_80145150	chr10	80144659	80145150	ENSMUSG00000091778.1	Gm17306	ENSMUST00000167769.1	lincRNA	+
chr10_80204401_80205669	chr10	80204401	80205669	ENSMUSG00000020198.7	Ap3d1	ENSMUST00000020420.7	protein_coding	-
chr10_80217583_80218236	chr10	80217583	80218236	ENSMUSG00000061589.7	Dot1l	ENSMUST00000105336.2	protein_coding	+
chr10_80217583_80218236	chr10	80217583	80218236	ENSMUSG00000061589.7	Dot1l	ENSMUST00000092291.5	protein_coding	+
chr10_80217583_80218236	chr10	80217583	80218236	ENSMUSG00000061589.7	Dot1l	ENSMUST00000127740.1	nonsense_mediated_decay	+
chr10_80217583_80218236	chr10	80217583	80218236	ENSMUSG00000061589.7	Dot1l	ENSMUST00000165427.1	protein_coding	+
chr10_80217583_80218236	chr10	80217583	80218236	ENSMUSG00000061589.7	Dot1l	ENSMUST00000147579.1	retained_intron	+
chr10_80246293_80248312	chr10	80246293	80248312	ENSMUSG00000061589.7	Dot1l	ENSMUST00000163526.1	retained_intron	+
chr10_80254057_80256193	chr10	80254057	80256193	ENSMUSG00000061589.7	Dot1l	ENSMUST00000138505.1	protein_coding	+
chr10_80288715_80289930	chr10	80288715	80289930	ENSMUSG00000035242.8	Oaz1	ENSMUST00000060987.8	protein_coding	+
chr10_80305805_80308339	chr10	80305805	80308339	ENSMUSG00000051067.7	Lingo3	ENSMUST00000053986.7	protein_coding	-
chr10_80317377_80319377	chr10	80317377	80319377	ENSMUSG00000035206.8	3110056O03Rik	ENSMUST00000035597.8	protein_coding	+
chr10_80317377_80319377	chr10	80317377	80319377	ENSMUSG00000035206.8	3110056O03Rik	ENSMUST00000171471.1	protein_coding	+
chr10_80317377_80319377	chr10	80317377	80319377	ENSMUSG00000035215.8	Lsm7	ENSMUST00000035775.8	protein_coding	-
chr10_80380028_80381574	chr10	80380028	80381574	ENSMUSG00000062075.6	Lmnb2	ENSMUST00000159094.1	processed_transcript	-
chr10_80380028_80381574	chr10	80380028	80381574	ENSMUSG00000062075.6	Lmnb2	ENSMUST00000057623.7	protein_coding	-
chr10_80391269_80394321	chr10	80391269	80394321	ENSMUSG00000015312.8	Gadd45b	ENSMUST00000015456.8	protein_coding	+
chr10_80417370_80419693	chr10	80417370	80419693	ENSMUSG00000083808.1	Gm3828	ENSMUST00000121817.1	transcribed_processed_pseudogene	-
chr10_80463938_80464368	chr10	80463938	80464368	ENSMUSG00000048240.8	Gng7	ENSMUST00000118233.1	protein_coding	-
chr10_80463938_80464368	chr10	80463938	80464368	ENSMUSG00000048240.8	Gng7	ENSMUST00000099462.1	protein_coding	-
chr10_80477157_80478178	chr10	80477157	80478178	ENSMUSG00000048240.8	Gng7	ENSMUST00000126317.1	protein_coding	-
chr10_80477157_80478178	chr10	80477157	80478178	ENSMUSG00000048240.8	Gng7	ENSMUST00000117805.1	protein_coding	-
chr10_80477157_80478178	chr10	80477157	80478178	ENSMUSG00000048240.8	Gng7	ENSMUST00000092285.3	protein_coding	-
chr10_80487941_80488235	chr10	80487941	80488235	ENSMUSG00000087114.1	Gm16099	ENSMUST00000151873.1	antisense	+
chr10_80487941_80488235	chr10	80487941	80488235	ENSMUSG00000043670.4	Diras1	ENSMUST00000144640.1	protein_coding	-
chr10_80487941_80488235	chr10	80487941	80488235	ENSMUSG00000043670.4	Diras1	ENSMUST00000055125.4	protein_coding	-
chr10_80499626_80500652	chr10	80499626	80500652	ENSMUSG00000046822.6	Slc39a3	ENSMUST00000152177.1	processed_transcript	-
chr10_80499626_80500652	chr10	80499626	80500652	ENSMUSG00000046822.6	Slc39a3	ENSMUST00000154877.1	processed_transcript	-
chr10_80499626_80500652	chr10	80499626	80500652	ENSMUSG00000046822.6	Slc39a3	ENSMUST00000059551.4	protein_coding	-
chr10_80499626_80500652	chr10	80499626	80500652	ENSMUSG00000046822.6	Slc39a3	ENSMUST00000117276.2	protein_coding	-
chr10_80522140_80523514	chr10	80522140	80523514	ENSMUSG00000004937.5	Sgta	ENSMUST00000005067.5	protein_coding	-
chr10_80532252_80533383	chr10	80532252	80533383	ENSMUSG00000004929.6	Thop1	ENSMUST00000005057.6	protein_coding	+
chr10_80532252_80533383	chr10	80532252	80533383	ENSMUSG00000004929.6	Thop1	ENSMUST00000167658.1	retained_intron	+
chr10_80532252_80533383	chr10	80532252	80533383	ENSMUSG00000004929.6	Thop1	ENSMUST00000171484.1	processed_transcript	+
chr10_80554434_80554797	chr10	80554434	80554797	ENSMUSG00000035041.8	Creb3l3	ENSMUST00000143969.1	retained_intron	-
chr10_80555197_80556032	chr10	80555197	80556032	ENSMUSG00000035041.8	Creb3l3	ENSMUST00000127374.1	retained_intron	-
chr10_80567998_80569585	chr10	80567998	80569585	ENSMUSG00000035027.10	Map2k2	ENSMUST00000143517.1	protein_coding	+
chr10_80567998_80569585	chr10	80567998	80569585	ENSMUSG00000035027.10	Map2k2	ENSMUST00000105331.1	protein_coding	+
chr10_80567998_80569585	chr10	80567998	80569585	ENSMUSG00000035027.10	Map2k2	ENSMUST00000099460.4	protein_coding	+
chr10_80567998_80569585	chr10	80567998	80569585	ENSMUSG00000035027.10	Map2k2	ENSMUST00000048223.7	nonsense_mediated_decay	+
chr10_80567998_80569585	chr10	80567998	80569585	ENSMUSG00000035027.10	Map2k2	ENSMUST00000136743.1	protein_coding	+
chr10_80597786_80598555	chr10	80597786	80598555	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000125261.1	protein_coding	+
chr10_80598703_80599064	chr10	80598703	80599064	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000048128.8	protein_coding	+
chr10_80599201_80601263	chr10	80599201	80601263	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000048128.8	protein_coding	+
chr10_80599201_80601263	chr10	80599201	80601263	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000119606.1	protein_coding	+
chr10_80599201_80601263	chr10	80599201	80601263	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000146895.1	protein_coding	+
chr10_80599201_80601263	chr10	80599201	80601263	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000121840.1	protein_coding	+
chr10_80599201_80601263	chr10	80599201	80601263	ENSMUSG00000035011.9	Zbtb7a	ENSMUST00000117956.1	protein_coding	+
chr10_80617112_80618726	chr10	80617112	80618726	ENSMUSG00000004934.7	Pias4	ENSMUST00000134017.1	retained_intron	-
chr10_80630303_80632033	chr10	80630303	80632033	ENSMUSG00000004934.7	Pias4	ENSMUST00000129549.1	retained_intron	-
chr10_80630303_80632033	chr10	80630303	80632033	ENSMUSG00000004934.7	Pias4	ENSMUST00000146764.1	nonsense_mediated_decay	-
chr10_80630303_80632033	chr10	80630303	80632033	ENSMUSG00000004934.7	Pias4	ENSMUST00000005064.7	protein_coding	-
chr10_80656783_80657592	chr10	80656783	80657592	ENSMUSG00000085779.1	2310050B05Rik	ENSMUST00000129834.1	antisense	+
chr10_80656783_80657592	chr10	80656783	80657592	ENSMUSG00000085779.1	2310050B05Rik	ENSMUST00000129950.1	antisense	+
chr10_80656783_80657592	chr10	80656783	80657592	ENSMUSG00000085779.1	2310050B05Rik	ENSMUST00000150782.1	antisense	+
chr10_80664651_80665095	chr10	80664651	80665095	ENSMUSG00000004939.6	Itgb1bp3	ENSMUST00000005069.6	protein_coding	-
chr10_80679918_80681443	chr10	80679918	80681443	ENSMUSG00000093312.1	AC155932.2	ENSMUST00000175571.1	misc_RNA	-
chr10_80692478_80694326	chr10	80692478	80694326	ENSMUSG00000034958.5	Atcay	ENSMUST00000047408.4	protein_coding	-
chr10_80692478_80694326	chr10	80692478	80694326	ENSMUSG00000034958.5	Atcay	ENSMUST00000146030.1	nonsense_mediated_decay	-
chr10_80695507_80696264	chr10	80695507	80696264	ENSMUSG00000034949.11	Zfr2	ENSMUST00000117798.1	protein_coding	+
chr10_80695507_80696264	chr10	80695507	80696264	ENSMUSG00000034949.11	Zfr2	ENSMUST00000144087.1	protein_coding	+
chr10_80695507_80696264	chr10	80695507	80696264	ENSMUSG00000034949.11	Zfr2	ENSMUST00000092282.3	protein_coding	+
chr10_80695507_80696264	chr10	80695507	80696264	ENSMUSG00000034949.11	Zfr2	ENSMUST00000128182.1	retained_intron	+
chr10_80695507_80696264	chr10	80695507	80696264	ENSMUSG00000034949.11	Zfr2	ENSMUST00000127526.1	nonsense_mediated_decay	+
chr10_80695507_80696264	chr10	80695507	80696264	ENSMUSG00000034949.11	Zfr2	ENSMUST00000132174.1	retained_intron	+
chr10_80710368_80711395	chr10	80710368	80711395	ENSMUSG00000034949.11	Zfr2	ENSMUST00000137999.1	protein_coding	+
chr10_80714513_80716553	chr10	80714513	80716553	ENSMUSG00000004933.10	Matk	ENSMUST00000119547.1	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000105328.3	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000128576.1	nonsense_mediated_decay	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000117488.1	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000121205.1	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000150605.1	retained_intron	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000126720.1	retained_intron	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000105330.3	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000130282.1	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000120265.1	protein_coding	+
chr10_80719876_80721015	chr10	80719876	80721015	ENSMUSG00000004933.10	Matk	ENSMUST00000151660.1	retained_intron	+
chr10_80729039_80730235	chr10	80729039	80730235	ENSMUSG00000034932.4	Mrpl54	ENSMUST00000145452.1	retained_intron	-
chr10_80729039_80730235	chr10	80729039	80730235	ENSMUSG00000034932.4	Mrpl54	ENSMUST00000046114.4	protein_coding	-
chr10_80730745_80731543	chr10	80730745	80731543	ENSMUSG00000004931.9	Apba3	ENSMUST00000057798.8	protein_coding	+
chr10_80730745_80731543	chr10	80730745	80731543	ENSMUSG00000004931.9	Apba3	ENSMUST00000099453.4	protein_coding	+
chr10_80753668_80754215	chr10	80753668	80754215	ENSMUSG00000034917.6	Tjp3	ENSMUST00000092280.4	protein_coding	-
chr10_80753668_80754215	chr10	80753668	80754215	ENSMUSG00000034917.6	Tjp3	ENSMUST00000045744.6	protein_coding	-
chr10_80755119_80756376	chr10	80755119	80756376	ENSMUSG00000034902.11	Pip5k1c	ENSMUST00000163075.1	protein_coding	+
chr10_80755119_80756376	chr10	80755119	80756376	ENSMUSG00000034902.11	Pip5k1c	ENSMUST00000105327.3	protein_coding	+
chr10_80755119_80756376	chr10	80755119	80756376	ENSMUSG00000034902.11	Pip5k1c	ENSMUST00000160291.1	nonsense_mediated_decay	+
chr10_80755119_80756376	chr10	80755119	80756376	ENSMUSG00000034902.11	Pip5k1c	ENSMUST00000161854.1	nonsense_mediated_decay	+
chr10_80755119_80756376	chr10	80755119	80756376	ENSMUSG00000034902.11	Pip5k1c	ENSMUST00000045469.8	protein_coding	+
chr10_80765064_80766863	chr10	80765064	80766863	ENSMUSG00000090230.1	Gm16315	ENSMUST00000163009.1	antisense	-
chr10_80790694_80792673	chr10	80790694	80792673	ENSMUSG00000034881.7	Tbxa2r	ENSMUST00000105325.2	protein_coding	+
chr10_80805804_80806352	chr10	80805804	80806352	ENSMUSG00000034872.5	Gipc3	ENSMUST00000045102.5	protein_coding	-
chr10_80809394_80809836	chr10	80809394	80809836	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000134857.1	retained_intron	-
chr10_80811904_80812171	chr10	80811904	80812171	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000141171.1	protein_coding	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000140160.1	processed_transcript	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000129482.1	retained_intron	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000148839.1	processed_transcript	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000154609.1	protein_coding	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000167481.1	protein_coding	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000122993.1	nonsense_mediated_decay	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000132313.1	retained_intron	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000020454.4	protein_coding	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000105324.2	protein_coding	-
chr10_80812863_80814006	chr10	80812863	80814006	ENSMUSG00000020232.10	Hmg20b	ENSMUST00000105323.1	protein_coding	-
chr10_80818974_80821130	chr10	80818974	80821130	ENSMUSG00000034854.8	F630110N24Rik	ENSMUST00000044844.8	protein_coding	+
chr10_80818974_80821130	chr10	80818974	80821130	ENSMUSG00000034854.8	F630110N24Rik	ENSMUST00000132368.1	nonsense_mediated_decay	+
chr10_80827527_80829544	chr10	80827527	80829544	ENSMUSG00000020234.4	4930404N11Rik	ENSMUST00000130762.1	retained_intron	-
chr10_80827527_80829544	chr10	80827527	80829544	ENSMUSG00000020234.4	4930404N11Rik	ENSMUST00000020456.4	protein_coding	-
chr10_80827527_80829544	chr10	80827527	80829544	ENSMUSG00000020234.4	4930404N11Rik	ENSMUST00000124512.1	retained_intron	-
chr10_80827527_80829544	chr10	80827527	80829544	ENSMUSG00000020234.4	4930404N11Rik	ENSMUST00000131736.1	protein_coding	-
chr10_80840550_80841910	chr10	80840550	80841910	ENSMUSG00000020235.9	Fzr1	ENSMUST00000127203.1	processed_transcript	-
chr10_80840550_80841910	chr10	80840550	80841910	ENSMUSG00000020235.9	Fzr1	ENSMUST00000138343.1	retained_intron	-
chr10_80840550_80841910	chr10	80840550	80841910	ENSMUSG00000020235.9	Fzr1	ENSMUST00000020457.7	nonsense_mediated_decay	-
chr10_80840550_80841910	chr10	80840550	80841910	ENSMUSG00000020235.9	Fzr1	ENSMUST00000168384.1	protein_coding	-
chr10_80840550_80841910	chr10	80840550	80841910	ENSMUSG00000020235.9	Fzr1	ENSMUST00000140901.1	protein_coding	-
chr10_80852159_80852897	chr10	80852159	80852897	ENSMUSG00000078440.3	Dohh	ENSMUST00000156229.1	retained_intron	+
chr10_80855303_80856016	chr10	80855303	80856016	ENSMUSG00000078439.3	2210404O07Rik	ENSMUST00000105322.2	protein_coding	+
chr10_80856206_80856754	chr10	80856206	80856754	ENSMUSG00000078439.3	2210404O07Rik	ENSMUST00000118206.1	protein_coding	+
chr10_80856206_80856754	chr10	80856206	80856754	ENSMUSG00000078439.3	2210404O07Rik	ENSMUST00000129083.1	processed_transcript	+
chr10_80863177_80865245	chr10	80863177	80865245	ENSMUSG00000055053.10	Nfic	ENSMUST00000152670.1	processed_transcript	-
chr10_80870204_80871358	chr10	80870204	80871358	ENSMUSG00000055053.10	Nfic	ENSMUST00000140916.1	protein_coding	-
chr10_80889559_80890031	chr10	80889559	80890031	ENSMUSG00000055053.10	Nfic	ENSMUST00000020461.8	protein_coding	-
chr10_80889559_80890031	chr10	80889559	80890031	ENSMUSG00000055053.10	Nfic	ENSMUST00000078185.7	protein_coding	-
chr10_80889559_80890031	chr10	80889559	80890031	ENSMUSG00000055053.10	Nfic	ENSMUST00000105320.3	protein_coding	-
chr10_80889559_80890031	chr10	80889559	80890031	ENSMUSG00000055053.10	Nfic	ENSMUST00000105319.3	protein_coding	-
chr10_80889559_80890031	chr10	80889559	80890031	ENSMUSG00000055053.10	Nfic	ENSMUST00000105321.3	protein_coding	-
chr10_80893439_80894688	chr10	80893439	80894688	ENSMUSG00000055053.10	Nfic	ENSMUST00000117966.1	protein_coding	-
chr10_80933227_80933733	chr10	80933227	80933733	ENSMUSG00000034818.10	Celf5	ENSMUST00000145375.1	retained_intron	-
chr10_80935650_80936210	chr10	80935650	80936210	ENSMUSG00000034818.10	Celf5	ENSMUST00000147524.1	protein_coding	-
chr10_80935650_80936210	chr10	80935650	80936210	ENSMUSG00000034818.10	Celf5	ENSMUST00000141207.1	retained_intron	-
chr10_80935650_80936210	chr10	80935650	80936210	ENSMUSG00000034818.10	Celf5	ENSMUST00000119060.1	protein_coding	-
chr10_80944800_80945828	chr10	80944800	80945828	ENSMUSG00000034818.10	Celf5	ENSMUST00000128494.1	retained_intron	-
chr10_80944800_80945828	chr10	80944800	80945828	ENSMUSG00000034818.10	Celf5	ENSMUST00000120508.1	protein_coding	-
chr10_80944800_80945828	chr10	80944800	80945828	ENSMUSG00000034818.10	Celf5	ENSMUST00000118763.1	protein_coding	-
chr10_80950589_80951249	chr10	80950589	80951249	ENSMUSG00000020238.8	Ncln	ENSMUST00000136721.1	retained_intron	-
chr10_80950589_80951249	chr10	80950589	80951249	ENSMUSG00000020238.8	Ncln	ENSMUST00000125521.1	retained_intron	-
chr10_80950589_80951249	chr10	80950589	80951249	ENSMUSG00000020238.8	Ncln	ENSMUST00000124437.1	protein_coding	-
chr10_80950589_80951249	chr10	80950589	80951249	ENSMUSG00000020238.8	Ncln	ENSMUST00000151701.1	retained_intron	-
chr10_80958590_80959938	chr10	80958590	80959938	ENSMUSG00000020238.8	Ncln	ENSMUST00000151680.1	retained_intron	-
chr10_80958590_80959938	chr10	80958590	80959938	ENSMUSG00000020238.8	Ncln	ENSMUST00000118498.1	protein_coding	-
chr10_80958590_80959938	chr10	80958590	80959938	ENSMUSG00000020238.8	Ncln	ENSMUST00000020463.7	protein_coding	-
chr10_80962278_80962645	chr10	80962278	80962645	ENSMUSG00000044199.4	S1pr4	ENSMUST00000053646.4	protein_coding	-
chr10_80970492_80971353	chr10	80970492	80971353	ENSMUSG00000034792.8	Gna15	ENSMUST00000147908.1	retained_intron	-
chr10_80986405_80987499	chr10	80986405	80987499	ENSMUSG00000034792.8	Gna15	ENSMUST00000043709.7	protein_coding	-
chr10_81007292_81008737	chr10	81007292	81008737	ENSMUSG00000034781.5	Gna11	ENSMUST00000043604.5	protein_coding	-
chr10_81021642_81024392	chr10	81021642	81024392	ENSMUSG00000054452.8	Aes	ENSMUST00000002518.8	protein_coding	+
chr10_81021642_81024392	chr10	81021642	81024392	ENSMUSG00000054452.8	Aes	ENSMUST00000105318.3	protein_coding	+
chr10_81037873_81038344	chr10	81037873	81038344	ENSMUSG00000034771.9	Tle2	ENSMUST00000129798.1	retained_intron	+
chr10_81037873_81038344	chr10	81037873	81038344	ENSMUSG00000034771.9	Tle2	ENSMUST00000135211.1	protein_coding	+
chr10_81037873_81038344	chr10	81037873	81038344	ENSMUSG00000034771.9	Tle2	ENSMUST00000146916.1	protein_coding	+
chr10_81037873_81038344	chr10	81037873	81038344	ENSMUSG00000034771.9	Tle2	ENSMUST00000136254.1	retained_intron	+
chr10_81037873_81038344	chr10	81037873	81038344	ENSMUSG00000034771.9	Tle2	ENSMUST00000143285.1	protein_coding	+
chr10_81037873_81038344	chr10	81037873	81038344	ENSMUSG00000034771.9	Tle2	ENSMUST00000146358.1	protein_coding	+
chr10_81042897_81044043	chr10	81042897	81044043	ENSMUSG00000034771.9	Tle2	ENSMUST00000145878.1	retained_intron	+
chr10_81059755_81060388	chr10	81059755	81060388	ENSMUSG00000034758.5	Tle6	ENSMUST00000135008.1	processed_transcript	-
chr10_81059755_81060388	chr10	81059755	81060388	ENSMUSG00000034758.5	Tle6	ENSMUST00000149721.1	processed_transcript	-
chr10_81059755_81060388	chr10	81059755	81060388	ENSMUSG00000034758.5	Tle6	ENSMUST00000131530.1	processed_transcript	-
chr10_81059755_81060388	chr10	81059755	81060388	ENSMUSG00000034758.5	Tle6	ENSMUST00000137631.1	processed_transcript	-
chr10_81059755_81060388	chr10	81059755	81060388	ENSMUSG00000034758.5	Tle6	ENSMUST00000128278.1	processed_transcript	-
chr10_81063344_81064193	chr10	81063344	81064193	ENSMUSG00000034758.5	Tle6	ENSMUST00000127546.1	protein_coding	-
chr10_81063344_81064193	chr10	81063344	81064193	ENSMUSG00000034758.5	Tle6	ENSMUST00000151858.1	nonsense_mediated_decay	-
chr10_81063344_81064193	chr10	81063344	81064193	ENSMUSG00000034758.5	Tle6	ENSMUST00000170029.1	protein_coding	-
chr10_81063344_81064193	chr10	81063344	81064193	ENSMUSG00000034758.5	Tle6	ENSMUST00000072020.2	protein_coding	-
chr10_81063344_81064193	chr10	81063344	81064193	ENSMUSG00000034758.5	Tle6	ENSMUST00000142948.1	protein_coding	-
chr10_81067523_81069527	chr10	81067523	81069527	ENSMUSG00000074862.4	BC025920	ENSMUST00000126940.1	processed_transcript	+
chr10_81067523_81069527	chr10	81067523	81069527	ENSMUSG00000074862.4	BC025920	ENSMUST00000119492.1	protein_coding	+
chr10_81067523_81069527	chr10	81067523	81069527	ENSMUSG00000074862.4	BC025920	ENSMUST00000119753.1	protein_coding	+
chr10_81067523_81069527	chr10	81067523	81069527	ENSMUSG00000074862.4	BC025920	ENSMUST00000121138.1	protein_coding	+
chr10_81089618_81091076	chr10	81089618	81091076	ENSMUSG00000034748.10	Sirt6	ENSMUST00000143424.1	protein_coding	-
chr10_81089618_81091076	chr10	81089618	81091076	ENSMUSG00000034748.10	Sirt6	ENSMUST00000126477.1	retained_intron	-
chr10_81089618_81091076	chr10	81089618	81091076	ENSMUSG00000034748.10	Sirt6	ENSMUST00000042923.8	protein_coding	-
chr10_81089618_81091076	chr10	81089618	81091076	ENSMUSG00000034748.10	Sirt6	ENSMUST00000119324.1	protein_coding	-
chr10_81095832_81097024	chr10	81095832	81097024	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000123993.1	nonsense_mediated_decay	+
chr10_81095832_81097024	chr10	81095832	81097024	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000011420.7	protein_coding	+
chr10_81095832_81097024	chr10	81095832	81097024	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000140345.1	protein_coding	+
chr10_81095832_81097024	chr10	81095832	81097024	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000154707.1	retained_intron	+
chr10_81095832_81097024	chr10	81095832	81097024	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000126323.1	protein_coding	+
chr10_81095832_81097024	chr10	81095832	81097024	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000129491.1	retained_intron	+
chr10_81105376_81107094	chr10	81105376	81107094	ENSMUSG00000054708.10	Ankrd24	ENSMUST00000132458.1	protein_coding	+
chr10_81111395_81112572	chr10	81111395	81112572	ENSMUSG00000074860.2	Gm10778	ENSMUST00000099439.2	protein_coding	+
chr10_81640663_81641976	chr10	81640663	81641976	ENSMUSG00000087481.1	Gm15608	ENSMUST00000156803.1	antisense	+
chr10_81703127_81704450	chr10	81703127	81704450	ENSMUSG00000062931.8	Zfp938	ENSMUST00000156218.1	nonsense_mediated_decay	-
chr10_81703127_81704450	chr10	81703127	81704450	ENSMUSG00000062931.8	Zfp938	ENSMUST00000041264.8	protein_coding	-
chr10_82085067_82086862	chr10	82085067	82086862	ENSMUSG00000063320.3	1190007I07Rik	ENSMUST00000079648.3	protein_coding	-
chr10_82091791_82093386	chr10	82091791	82093386	ENSMUSG00000034674.11	Tdg	ENSMUST00000092266.4	protein_coding	+
chr10_82091791_82093386	chr10	82091791	82093386	ENSMUSG00000034674.11	Tdg	ENSMUST00000151390.1	protein_coding	+
chr10_82091791_82093386	chr10	82091791	82093386	ENSMUSG00000034674.11	Tdg	ENSMUST00000133227.1	processed_transcript	+
chr10_82091791_82093386	chr10	82091791	82093386	ENSMUSG00000034674.11	Tdg	ENSMUST00000145370.1	protein_coding	+
chr10_82103447_82104121	chr10	82103447	82104121	ENSMUSG00000034674.11	Tdg	ENSMUST00000148790.1	processed_transcript	+
chr10_82108858_82109719	chr10	82108858	82109719	ENSMUSG00000034674.11	Tdg	ENSMUST00000142658.1	retained_intron	+
chr10_82132769_82133169	chr10	82132769	82133169	ENSMUSG00000020251.7	Glt8d2	ENSMUST00000155529.1	processed_transcript	-
chr10_82151969_82154109	chr10	82151969	82154109	ENSMUSG00000020251.7	Glt8d2	ENSMUST00000140071.1	retained_intron	-
chr10_82151969_82154109	chr10	82151969	82154109	ENSMUSG00000020251.7	Glt8d2	ENSMUST00000125505.1	processed_transcript	-
chr10_82151969_82154109	chr10	82151969	82154109	ENSMUSG00000020251.7	Glt8d2	ENSMUST00000065815.6	protein_coding	-
chr10_82151969_82154109	chr10	82151969	82154109	ENSMUSG00000020251.7	Glt8d2	ENSMUST00000020485.3	protein_coding	-
chr10_82161085_82162938	chr10	82161085	82162938	ENSMUSG00000020246.7	Hcfc2	ENSMUST00000020478.7	protein_coding	+
chr10_82161085_82162938	chr10	82161085	82162938	ENSMUSG00000020246.7	Hcfc2	ENSMUST00000162422.1	nonsense_mediated_decay	+
chr10_82190562_82191519	chr10	82190562	82191519	ENSMUSG00000020246.7	Hcfc2	ENSMUST00000160681.1	protein_coding	+
chr10_82220126_82220420	chr10	82220126	82220420	ENSMUSG00000020248.11	Nfyb	ENSMUST00000128397.1	retained_intron	-
chr10_82225461_82227484	chr10	82225461	82227484	ENSMUSG00000020248.11	Nfyb	ENSMUST00000142523.1	protein_coding	-
chr10_82225461_82227484	chr10	82225461	82227484	ENSMUSG00000020248.11	Nfyb	ENSMUST00000127832.1	processed_transcript	-
chr10_82225461_82227484	chr10	82225461	82227484	ENSMUSG00000020248.11	Nfyb	ENSMUST00000143749.1	retained_intron	-
chr10_82225461_82227484	chr10	82225461	82227484	ENSMUSG00000020248.11	Nfyb	ENSMUST00000105309.3	protein_coding	-
chr10_82225461_82227484	chr10	82225461	82227484	ENSMUSG00000020248.11	Nfyb	ENSMUST00000130911.1	protein_coding	-
chr10_82274557_82275227	chr10	82274557	82275227	ENSMUSG00000056821.6	1700028I16Rik	ENSMUST00000076984.6	protein_coding	+
chr10_82296731_82297016	chr10	82296731	82297016	ENSMUSG00000020250.8	Txnrd1	ENSMUST00000170240.1	protein_coding	+
chr10_82321314_82323807	chr10	82321314	82323807	ENSMUSG00000020250.8	Txnrd1	ENSMUST00000020484.6	protein_coding	+
chr10_82321314_82323807	chr10	82321314	82323807	ENSMUSG00000020250.8	Txnrd1	ENSMUST00000166077.1	protein_coding	+
chr10_82321314_82323807	chr10	82321314	82323807	ENSMUSG00000020250.8	Txnrd1	ENSMUST00000167785.1	protein_coding	+
chr10_82447491_82449791	chr10	82447491	82449791	ENSMUSG00000034612.7	Chst11	ENSMUST00000040110.7	protein_coding	+
chr10_82785134_82786865	chr10	82785134	82786865	ENSMUSG00000034591.5	Slc41a2	ENSMUST00000154926.1	protein_coding	-
chr10_82799451_82801192	chr10	82799451	82801192	ENSMUSG00000034591.5	Slc41a2	ENSMUST00000126617.1	protein_coding	-
chr10_82799451_82801192	chr10	82799451	82801192	ENSMUSG00000034591.5	Slc41a2	ENSMUST00000039956.5	protein_coding	-
chr10_82822189_82823662	chr10	82822189	82823662	ENSMUSG00000020255.7	D10Wsu102e	ENSMUST00000020488.7	protein_coding	+
chr10_82995893_82997255	chr10	82995893	82997255	ENSMUSG00000020256.8	Aldh1l2	ENSMUST00000138858.1	retained_intron	-
chr10_82995893_82997255	chr10	82995893	82997255	ENSMUSG00000020256.8	Aldh1l2	ENSMUST00000146640.1	protein_coding	-
chr10_82995893_82997255	chr10	82995893	82997255	ENSMUSG00000020256.8	Aldh1l2	ENSMUST00000020497.7	protein_coding	-
chr10_83005997_83007310	chr10	83005997	83007310	ENSMUSG00000034560.5	A230046K03Rik	ENSMUST00000038388.5	protein_coding	+
chr10_83100018_83101155	chr10	83100018	83101155	ENSMUSG00000020263.7	Appl2	ENSMUST00000133719.1	processed_transcript	-
chr10_83110608_83112177	chr10	83110608	83112177	ENSMUSG00000020263.7	Appl2	ENSMUST00000150685.1	nonsense_mediated_decay	-
chr10_83110608_83112177	chr10	83110608	83112177	ENSMUSG00000020263.7	Appl2	ENSMUST00000146876.1	protein_coding	-
chr10_83110608_83112177	chr10	83110608	83112177	ENSMUSG00000020263.7	Appl2	ENSMUST00000147582.1	retained_intron	-
chr10_83110608_83112177	chr10	83110608	83112177	ENSMUSG00000020263.7	Appl2	ENSMUST00000020500.7	protein_coding	-
chr10_83184717_83186401	chr10	83184717	83186401	ENSMUSG00000087651.2	1500009L16Rik	ENSMUST00000150459.1	protein_coding	+
chr10_83854794_83855047	chr10	83854794	83855047	ENSMUSG00000020032.8	Nuak1	ENSMUST00000129355.1	protein_coding	-
chr10_83902736_83904462	chr10	83902736	83904462	ENSMUSG00000020032.8	Nuak1	ENSMUST00000020220.8	protein_coding	-
chr10_83950825_83951704	chr10	83950825	83951704	ENSMUSG00000020033.2	4930463O16Rik	ENSMUST00000020222.1	lincRNA	+
chr10_83950825_83951704	chr10	83950825	83951704	ENSMUSG00000020033.2	4930463O16Rik	ENSMUST00000168525.1	lincRNA	+
chr10_83995581_83997704	chr10	83995581	83997704	ENSMUSG00000046841.4	Ckap4	ENSMUST00000167671.1	protein_coding	-
chr10_83995581_83997704	chr10	83995581	83997704	ENSMUSG00000046841.4	Ckap4	ENSMUST00000053871.3	protein_coding	-
chr10_84038689_84040569	chr10	84038689	84040569	ENSMUSG00000020034.7	Tcp11l2	ENSMUST00000020223.7	protein_coding	+
chr10_84038689_84040569	chr10	84038689	84040569	ENSMUSG00000020034.7	Tcp11l2	ENSMUST00000162874.1	retained_intron	+
chr10_84084544_84085968	chr10	84084544	84085968	ENSMUSG00000034453.7	Polr3b	ENSMUST00000077175.5	protein_coding	+
chr10_84084544_84085968	chr10	84084544	84085968	ENSMUSG00000090905.1	Gm17249	ENSMUST00000172217.1	lincRNA	-
chr10_84218434_84219026	chr10	84218434	84219026	ENSMUSG00000020037.9	Rfx4	ENSMUST00000060397.6	protein_coding	+
chr10_84224813_84225181	chr10	84224813	84225181	ENSMUSG00000020037.9	Rfx4	ENSMUST00000165868.2	processed_transcript	+
chr10_84224813_84225181	chr10	84224813	84225181	ENSMUSG00000020037.9	Rfx4	ENSMUST00000173479.1	processed_transcript	+
chr10_84272645_84274616	chr10	84272645	84274616	ENSMUSG00000089451.1	U6	ENSMUST00000158826.1	snRNA	-
chr10_84300675_84301375	chr10	84300675	84301375	ENSMUSG00000020037.9	Rfx4	ENSMUST00000020226.3	processed_transcript	+
chr10_84300675_84301375	chr10	84300675	84301375	ENSMUSG00000020037.9	Rfx4	ENSMUST00000095388.4	protein_coding	+
chr10_84379470_84381019	chr10	84379470	84381019	ENSMUSG00000035620.7	Ric8b	ENSMUST00000038523.7	protein_coding	+
chr10_84379470_84381019	chr10	84379470	84381019	ENSMUSG00000035620.7	Ric8b	ENSMUST00000095385.2	protein_coding	+
chr10_84564543_84566741	chr10	84564543	84566741	ENSMUSG00000060935.5	AI597468	ENSMUST00000095383.4	protein_coding	+
chr10_84564543_84566741	chr10	84564543	84566741	ENSMUSG00000050035.6	Fhl4	ENSMUST00000059383.6	protein_coding	-
chr10_84590224_84591712	chr10	84590224	84591712	ENSMUSG00000049038.1	Mterfd3	ENSMUST00000050813.1	protein_coding	-
chr10_84646191_84648544	chr10	84646191	84648544	ENSMUSG00000020038.9	Cry1	ENSMUST00000020227.9	protein_coding	-
chr10_84849025_84851840	chr10	84849025	84851840	ENSMUSG00000020042.8	Btbd11	ENSMUST00000105307.1	protein_coding	+
chr10_84849025_84851840	chr10	84849025	84851840	ENSMUSG00000020042.8	Btbd11	ENSMUST00000038045.5	protein_coding	+
chr10_84849025_84851840	chr10	84849025	84851840	ENSMUSG00000020042.8	Btbd11	ENSMUST00000020231.3	protein_coding	+
chr10_85060657_85062254	chr10	85060657	85062254	ENSMUSG00000020042.8	Btbd11	ENSMUST00000105306.2	protein_coding	+
chr10_85060657_85062254	chr10	85060657	85062254	ENSMUSG00000020042.8	Btbd11	ENSMUST00000135235.1	processed_transcript	+
chr10_85102385_85102585	chr10	85102385	85102585	ENSMUSG00000020042.8	Btbd11	ENSMUST00000128338.1	processed_transcript	+
chr10_85333896_85335492	chr10	85333896	85335492	ENSMUSG00000001785.5	Pwp1	ENSMUST00000001836.2	protein_coding	+
chr10_85333896_85335492	chr10	85333896	85335492	ENSMUSG00000001785.5	Pwp1	ENSMUST00000164053.1	retained_intron	+
chr10_85333896_85335492	chr10	85333896	85335492	ENSMUSG00000001785.5	Pwp1	ENSMUST00000168509.1	nonsense_mediated_decay	+
chr10_85338572_85338850	chr10	85338572	85338850	ENSMUSG00000001785.5	Pwp1	ENSMUST00000164562.1	retained_intron	+
chr10_85379080_85380508	chr10	85379080	85380508	ENSMUSG00000035529.8	Prdm4	ENSMUST00000165433.1	protein_coding	-
chr10_85379080_85380508	chr10	85379080	85380508	ENSMUSG00000035529.8	Prdm4	ENSMUST00000037646.7	protein_coding	-
chr10_85390007_85392336	chr10	85390007	85392336	ENSMUSG00000085111.2	Ascl4	ENSMUST00000170396.1	antisense	+
chr10_85390007_85392336	chr10	85390007	85392336	ENSMUSG00000085111.2	Ascl4	ENSMUST00000156605.1	antisense	+
chr10_85419734_85420774	chr10	85419734	85420774	ENSMUSG00000001783.3	D10Wsu52e	ENSMUST00000001834.3	protein_coding	-
chr10_85473638_85474533	chr10	85473638	85474533	ENSMUSG00000050108.6	Bpifc	ENSMUST00000105304.1	protein_coding	-
chr10_85473638_85474533	chr10	85473638	85474533	ENSMUSG00000050108.6	Bpifc	ENSMUST00000061699.5	protein_coding	-
chr10_85484035_85485509	chr10	85484035	85485509	ENSMUSG00000001786.8	Fbxo7	ENSMUST00000130320.1	protein_coding	+
chr10_85484035_85485509	chr10	85484035	85485509	ENSMUSG00000001786.8	Fbxo7	ENSMUST00000001837.7	nonsense_mediated_decay	+
chr10_85484035_85485509	chr10	85484035	85485509	ENSMUSG00000001786.8	Fbxo7	ENSMUST00000147168.1	nonsense_mediated_decay	+
chr10_85484035_85485509	chr10	85484035	85485509	ENSMUSG00000001786.8	Fbxo7	ENSMUST00000120344.1	protein_coding	+
chr10_85484035_85485509	chr10	85484035	85485509	ENSMUSG00000001786.8	Fbxo7	ENSMUST00000117597.1	protein_coding	+
chr10_85494993_85495982	chr10	85494993	85495982	ENSMUSG00000001786.8	Fbxo7	ENSMUST00000134490.1	processed_transcript	+
chr10_85763001_85763815	chr10	85763001	85763815	ENSMUSG00000020044.7	Timp3	ENSMUST00000020234.7	protein_coding	+
chr10_85763001_85763815	chr10	85763001	85763815	ENSMUSG00000020044.7	Timp3	ENSMUST00000151134.1	processed_transcript	+
chr10_85763001_85763815	chr10	85763001	85763815	ENSMUSG00000020044.7	Timp3	ENSMUST00000136045.1	processed_transcript	+
chr10_85764451_85766270	chr10	85764451	85766270	ENSMUSG00000020044.7	Timp3	ENSMUST00000132307.1	protein_coding	+
chr10_85954090_85955179	chr10	85954090	85955179	ENSMUSG00000059602.8	Syn3	ENSMUST00000123783.1	retained_intron	-
chr10_85954090_85955179	chr10	85954090	85955179	ENSMUSG00000059602.8	Syn3	ENSMUST00000145864.1	retained_intron	-
chr10_85960361_85962048	chr10	85960361	85962048	ENSMUSG00000059602.8	Syn3	ENSMUST00000139197.1	retained_intron	-
chr10_85960361_85962048	chr10	85960361	85962048	ENSMUSG00000059602.8	Syn3	ENSMUST00000121789.1	protein_coding	-
chr10_85960361_85962048	chr10	85960361	85962048	ENSMUSG00000059602.8	Syn3	ENSMUST00000120638.1	protein_coding	-
chr10_86118692_86118892	chr10	86118692	86118892	ENSMUSG00000090308.1	Gm5174	ENSMUST00000171131.1	protein_coding	+
chr10_86147643_86149042	chr10	86147643	86149042	ENSMUSG00000085814.1	1810014B01Rik	ENSMUST00000147222.1	lincRNA	+
chr10_86240305_86242826	chr10	86240305	86242826	ENSMUSG00000054027.6	Nt5dc3	ENSMUST00000099396.2	protein_coding	+
chr10_86341327_86343796	chr10	86341327	86343796	ENSMUSG00000035459.9	Stab2	ENSMUST00000159023.1	retained_intron	-
chr10_86348280_86348685	chr10	86348280	86348685	ENSMUSG00000035459.9	Stab2	ENSMUST00000159118.1	retained_intron	-
chr10_86371012_86372138	chr10	86371012	86372138	ENSMUSG00000089881.1	Gm16280	ENSMUST00000162458.1	processed_transcript	+
chr10_86371012_86372138	chr10	86371012	86372138	ENSMUSG00000089775.1	Gm16270	ENSMUST00000160327.1	transcribed_processed_pseudogene	+
chr10_86434519_86436384	chr10	86434519	86436384	ENSMUSG00000089656.1	Gm16271	ENSMUST00000162837.1	processed_transcript	+
chr10_86469786_86471484	chr10	86469786	86471484	ENSMUSG00000035459.9	Stab2	ENSMUST00000099390.2	processed_transcript	-
chr10_86469786_86471484	chr10	86469786	86471484	ENSMUSG00000035459.9	Stab2	ENSMUST00000163045.1	processed_transcript	-
chr10_86469786_86471484	chr10	86469786	86471484	ENSMUSG00000035459.9	Stab2	ENSMUST00000035288.8	protein_coding	-
chr10_86519922_86521569	chr10	86519922	86521569	ENSMUSG00000047129.4	1700113H08Rik	ENSMUST00000169849.1	protein_coding	+
chr10_86668608_86668929	chr10	86668608	86668929	ENSMUSG00000047129.4	1700113H08Rik	ENSMUST00000054229.3	protein_coding	+
chr10_86954666_86956691	chr10	86954666	86956691	ENSMUSG00000020052.7	Ascl1	ENSMUST00000020243.7	protein_coding	-
chr10_86984323_86985087	chr10	86984323	86985087	ENSMUSG00000020051.9	Pah	ENSMUST00000020241.8	protein_coding	+
chr10_86984323_86985087	chr10	86984323	86985087	ENSMUSG00000020051.9	Pah	ENSMUST00000142088.1	protein_coding	+
chr10_86984323_86985087	chr10	86984323	86985087	ENSMUSG00000020051.9	Pah	ENSMUST00000143624.1	protein_coding	+
chr10_87008530_87009969	chr10	87008530	87009969	ENSMUSG00000020051.9	Pah	ENSMUST00000133293.1	protein_coding	+
chr10_87290211_87290927	chr10	87290211	87290927	ENSMUSG00000058934.8	Gm16176	ENSMUST00000139652.1	antisense	-
chr10_87320375_87321229	chr10	87320375	87321229	ENSMUSG00000020053.11	Igf1	ENSMUST00000122386.1	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000075330.6	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000095360.4	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000105300.2	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000121952.1	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000126490.1	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000062862.6	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000121161.1	protein_coding	+
chr10_87321544_87324242	chr10	87321544	87324242	ENSMUSG00000020053.11	Igf1	ENSMUST00000122100.1	protein_coding	+
chr10_87325667_87326264	chr10	87325667	87326264	ENSMUSG00000058934.8	Gm16176	ENSMUST00000146581.1	antisense	-
chr10_87608859_87610408	chr10	87608859	87610408	ENSMUSG00000035351.9	Nup37	ENSMUST00000052355.7	protein_coding	+
chr10_87608859_87610408	chr10	87608859	87610408	ENSMUSG00000035351.9	Nup37	ENSMUST00000169309.1	protein_coding	+
chr10_87608859_87610408	chr10	87608859	87610408	ENSMUSG00000035365.9	4930547N16Rik	ENSMUST00000164803.1	protein_coding	-
chr10_87608859_87610408	chr10	87608859	87610408	ENSMUSG00000035365.9	4930547N16Rik	ENSMUST00000168163.1	protein_coding	-
chr10_87608859_87610408	chr10	87608859	87610408	ENSMUSG00000035365.9	4930547N16Rik	ENSMUST00000164121.1	protein_coding	-
chr10_87608859_87610408	chr10	87608859	87610408	ENSMUSG00000035365.9	4930547N16Rik	ENSMUST00000048518.9	protein_coding	-
chr10_87663122_87664759	chr10	87663122	87664759	ENSMUSG00000020056.8	Ccdc53	ENSMUST00000020248.8	protein_coding	+
chr10_87663122_87664759	chr10	87663122	87664759	ENSMUSG00000020056.8	Ccdc53	ENSMUST00000171151.1	protein_coding	+
chr10_87663122_87664759	chr10	87663122	87664759	ENSMUSG00000020056.8	Ccdc53	ENSMUST00000048238.8	protein_coding	+
chr10_87818980_87820646	chr10	87818980	87820646	ENSMUSG00000020057.2	Dram1	ENSMUST00000020249.1	protein_coding	-
chr10_87818980_87820646	chr10	87818980	87820646	ENSMUSG00000020057.2	Dram1	ENSMUST00000156097.1	nonsense_mediated_decay	-
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000127615.1	protein_coding	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000092244.5	protein_coding	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000151273.1	nonsense_mediated_decay	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000130301.1	protein_coding	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000020251.8	protein_coding	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000099382.1	protein_coding	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000035311.9	Gnptab	ENSMUST00000171610.1	protein_coding	+
chr10_87841507_87843772	chr10	87841507	87843772	ENSMUSG00000020057.2	Dram1	ENSMUST00000138159.1	protein_coding	-
chr10_87846342_87846594	chr10	87846342	87846594	ENSMUSG00000091432.1	Gm17338	ENSMUST00000166745.1	lincRNA	-
chr10_87922114_87923654	chr10	87922114	87923654	ENSMUSG00000020059.3	Sycp3	ENSMUST00000020252.3	protein_coding	+
chr10_87922114_87923654	chr10	87922114	87923654	ENSMUSG00000020059.3	Sycp3	ENSMUST00000123244.1	nonsense_mediated_decay	+
chr10_87922114_87923654	chr10	87922114	87923654	ENSMUSG00000020059.3	Sycp3	ENSMUST00000125612.1	retained_intron	+
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000073783.5	protein_coding	-
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000117579.1	protein_coding	-
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000139109.1	nonsense_mediated_decay	-
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000020253.8	protein_coding	-
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000143108.1	nonsense_mediated_decay	-
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000126074.1	nonsense_mediated_decay	-
chr10_87964631_87967218	chr10	87964631	87967218	ENSMUSG00000060002.8	Chpt1	ENSMUST00000117440.1	protein_coding	-
chr10_88067738_88068106	chr10	88067738	88068106	ENSMUSG00000020061.10	Mybpc1	ENSMUST00000119185.1	protein_coding	-
chr10_88067738_88068106	chr10	88067738	88068106	ENSMUSG00000020061.10	Mybpc1	ENSMUST00000121629.1	protein_coding	-
chr10_88145676_88146031	chr10	88145676	88146031	ENSMUSG00000004359.9	Spic	ENSMUST00000144338.1	retained_intron	-
chr10_88145676_88146031	chr10	88145676	88146031	ENSMUSG00000004359.9	Spic	ENSMUST00000133724.1	nonsense_mediated_decay	-
chr10_88145676_88146031	chr10	88145676	88146031	ENSMUSG00000004359.9	Spic	ENSMUST00000004473.8	protein_coding	-
chr10_88193080_88195014	chr10	88193080	88195014	ENSMUSG00000060904.7	Arl1	ENSMUST00000170137.1	protein_coding	+
chr10_88193080_88195014	chr10	88193080	88195014	ENSMUSG00000060904.7	Arl1	ENSMUST00000116234.2	protein_coding	+
chr10_88193080_88195014	chr10	88193080	88195014	ENSMUSG00000060904.7	Arl1	ENSMUST00000095348.5	protein_coding	+
chr10_88193080_88195014	chr10	88193080	88195014	ENSMUSG00000060904.7	Arl1	ENSMUST00000080379.6	protein_coding	+
chr10_88193080_88195014	chr10	88193080	88195014	ENSMUSG00000069540.4	Gm4925	ENSMUST00000092231.3	transcribed_processed_pseudogene	-
chr10_88193080_88195014	chr10	88193080	88195014	ENSMUSG00000069540.4	Gm4925	ENSMUST00000168843.1	antisense	-
chr10_88288839_88290042	chr10	88288839	88290042	ENSMUSG00000004356.7	Utp20	ENSMUST00000004470.7	protein_coding	-
chr10_88348192_88349366	chr10	88348192	88349366	ENSMUSG00000020062.6	Slc5a8	ENSMUST00000020255.6	protein_coding	+
chr10_88719117_88721035	chr10	88719117	88721035	ENSMUSG00000035189.8	Ano4	ENSMUST00000168537.1	protein_coding	-
chr10_88719117_88721035	chr10	88719117	88721035	ENSMUSG00000035189.8	Ano4	ENSMUST00000045601.7	protein_coding	-
chr10_88806192_88808536	chr10	88806192	88808536	ENSMUSG00000091581.1	Gm17277	ENSMUST00000168681.1	lincRNA	-
chr10_88905776_88907440	chr10	88905776	88907440	ENSMUSG00000074802.3	Gas2l3	ENSMUST00000099375.3	protein_coding	-
chr10_88905776_88907440	chr10	88905776	88907440	ENSMUSG00000074802.3	Gas2l3	ENSMUST00000099374.2	protein_coding	-
chr10_88905776_88907440	chr10	88905776	88907440	ENSMUSG00000074802.3	Gas2l3	ENSMUST00000105298.1	protein_coding	-
chr10_88968773_88969902	chr10	88968773	88969902	ENSMUSG00000047638.9	Nr1h4	ENSMUST00000058126.8	protein_coding	-
chr10_88968773_88969902	chr10	88968773	88969902	ENSMUSG00000047638.9	Nr1h4	ENSMUST00000105296.2	protein_coding	-
chr10_88995245_88996909	chr10	88995245	88996909	ENSMUSG00000047638.9	Nr1h4	ENSMUST00000105297.1	protein_coding	-
chr10_89061837_89062939	chr10	89061837	89062939	ENSMUSG00000019935.9	Slc17a8	ENSMUST00000105295.1	protein_coding	-
chr10_89083587_89084481	chr10	89083587	89084481	ENSMUSG00000019935.9	Slc17a8	ENSMUST00000099372.3	protein_coding	-
chr10_89083587_89084481	chr10	89083587	89084481	ENSMUSG00000019935.9	Slc17a8	ENSMUST00000020102.7	protein_coding	-
chr10_89148128_89149955	chr10	89148128	89149955	ENSMUSG00000087686.1	1500026H17Rik	ENSMUST00000123742.1	lincRNA	+
chr10_89148128_89149955	chr10	89148128	89149955	ENSMUSG00000069539.5	Scyl2	ENSMUST00000174429.1	retained_intron	-
chr10_89148128_89149955	chr10	89148128	89149955	ENSMUSG00000069539.5	Scyl2	ENSMUST00000174575.1	retained_intron	-
chr10_89148128_89149955	chr10	89148128	89149955	ENSMUSG00000069539.5	Scyl2	ENSMUST00000092227.5	protein_coding	-
chr10_89148128_89149955	chr10	89148128	89149955	ENSMUSG00000069539.5	Scyl2	ENSMUST00000174252.1	protein_coding	-
chr10_89194146_89195808	chr10	89194146	89195808	ENSMUSG00000019948.3	Actr6	ENSMUST00000020109.3	protein_coding	-
chr10_89206952_89208875	chr10	89206952	89208875	ENSMUSG00000019951.8	Uhrf1bp1l	ENSMUST00000020112.5	protein_coding	+
chr10_89206952_89208875	chr10	89206952	89208875	ENSMUSG00000019951.8	Uhrf1bp1l	ENSMUST00000171648.1	protein_coding	+
chr10_89334920_89337229	chr10	89334920	89337229	ENSMUSG00000058589.6	Anks1b	ENSMUST00000099368.3	protein_coding	+
chr10_90038906_90041035	chr10	90038906	90041035	ENSMUSG00000058589.6	Anks1b	ENSMUST00000099366.3	protein_coding	+
chr10_90038906_90041035	chr10	90038906	90041035	ENSMUSG00000058589.6	Anks1b	ENSMUST00000078569.6	protein_coding	+
chr10_90038906_90041035	chr10	90038906	90041035	ENSMUSG00000058589.6	Anks1b	ENSMUST00000092221.5	protein_coding	+
chr10_90038906_90041035	chr10	90038906	90041035	ENSMUSG00000058589.6	Anks1b	ENSMUST00000099364.3	protein_coding	+
chr10_90462356_90463420	chr10	90462356	90463420	ENSMUSG00000019979.6	Apaf1	ENSMUST00000161095.1	retained_intron	-
chr10_90462356_90463420	chr10	90462356	90463420	ENSMUSG00000019979.6	Apaf1	ENSMUST00000159457.1	processed_transcript	-
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019975.5	Ikbip	ENSMUST00000020150.3	protein_coding	+
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019975.5	Ikbip	ENSMUST00000020149.5	protein_coding	+
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019975.5	Ikbip	ENSMUST00000128371.1	processed_transcript	+
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019975.5	Ikbip	ENSMUST00000135152.1	retained_intron	+
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019979.6	Apaf1	ENSMUST00000160788.1	protein_coding	-
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019979.6	Apaf1	ENSMUST00000161987.1	protein_coding	-
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019979.6	Apaf1	ENSMUST00000162618.1	protein_coding	-
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019979.6	Apaf1	ENSMUST00000020157.6	protein_coding	-
chr10_90544630_90546572	chr10	90544630	90546572	ENSMUSG00000019979.6	Apaf1	ENSMUST00000159110.1	protein_coding	-
chr10_90585956_90587516	chr10	90585956	90587516	ENSMUSG00000061904.6	Slc25a3	ENSMUST00000172442.1	retained_intron	-
chr10_90585956_90587516	chr10	90585956	90587516	ENSMUSG00000061904.6	Slc25a3	ENSMUST00000164505.1	protein_coding	-
chr10_90585956_90587516	chr10	90585956	90587516	ENSMUSG00000061904.6	Slc25a3	ENSMUST00000170810.1	protein_coding	-
chr10_90585956_90587516	chr10	90585956	90587516	ENSMUSG00000061904.6	Slc25a3	ENSMUST00000163246.1	nonsense_mediated_decay	-
chr10_90585956_90587516	chr10	90585956	90587516	ENSMUSG00000061904.6	Slc25a3	ENSMUST00000076694.6	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000020123.5	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000099357.3	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000171713.1	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000072239.7	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000092219.6	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000099355.4	protein_coding	-
chr10_90633085_90634990	chr10	90633085	90634990	ENSMUSG00000019961.9	Tmpo	ENSMUST00000105293.3	protein_coding	-
chr10_91599825_91600120	chr10	91599825	91600120	ENSMUSG00000093227.1	AC125204.1	ENSMUST00000175486.1	miRNA	-
chr10_91624977_91626294	chr10	91624977	91626294	ENSMUSG00000090454.1	Gm17341	ENSMUST00000163916.1	lincRNA	+
chr10_91627675_91628038	chr10	91627675	91628038	ENSMUSG00000086180.1	Rmst	ENSMUST00000133537.1	lincRNA	-
chr10_91627675_91628038	chr10	91627675	91628038	ENSMUSG00000086180.1	Rmst	ENSMUST00000137229.1	lincRNA	-
chr10_92184304_92185932	chr10	92184304	92185932	ENSMUSG00000019988.6	Nedd1	ENSMUST00000020163.6	protein_coding	-
chr10_92532814_92533937	chr10	92532814	92533937	ENSMUSG00000020014.8	4930485B16Rik	ENSMUST00000171781.1	processed_transcript	-
chr10_92543715_92544618	chr10	92543715	92544618	ENSMUSG00000020014.8	4930485B16Rik	ENSMUST00000105292.1	protein_coding	-
chr10_92543715_92544618	chr10	92543715	92544618	ENSMUSG00000020014.8	4930485B16Rik	ENSMUST00000168080.1	retained_intron	-
chr10_92543715_92544618	chr10	92543715	92544618	ENSMUSG00000020014.8	4930485B16Rik	ENSMUST00000168617.1	protein_coding	-
chr10_92543715_92544618	chr10	92543715	92544618	ENSMUSG00000020014.8	4930485B16Rik	ENSMUST00000020200.7	protein_coding	-
chr10_92543715_92544618	chr10	92543715	92544618	ENSMUSG00000020014.8	4930485B16Rik	ENSMUST00000168110.1	protein_coding	-
chr10_92622896_92625427	chr10	92622896	92625427	ENSMUSG00000020015.8	Cdk17	ENSMUST00000069965.7	protein_coding	+
chr10_92622896_92625427	chr10	92622896	92625427	ENSMUSG00000089214.1	Mir1931	ENSMUST00000158589.1	miRNA	+
chr10_92670994_92671315	chr10	92670994	92671315	ENSMUSG00000020015.8	Cdk17	ENSMUST00000170355.1	protein_coding	+
chr10_92772303_92774280	chr10	92772303	92774280	ENSMUSG00000008398.7	Elk3	ENSMUST00000133365.1	retained_intron	-
chr10_92772303_92774280	chr10	92772303	92774280	ENSMUSG00000008398.7	Elk3	ENSMUST00000105291.2	protein_coding	-
chr10_92772303_92774280	chr10	92772303	92774280	ENSMUSG00000008398.7	Elk3	ENSMUST00000151153.1	protein_coding	-
chr10_92772303_92774280	chr10	92772303	92774280	ENSMUSG00000008398.7	Elk3	ENSMUST00000129827.1	nonsense_mediated_decay	-
chr10_92772303_92774280	chr10	92772303	92774280	ENSMUSG00000008398.7	Elk3	ENSMUST00000008542.5	protein_coding	-
chr10_92950858_92952041	chr10	92950858	92952041	ENSMUSG00000020017.8	Hal	ENSMUST00000129421.1	protein_coding	+
chr10_92950858_92952041	chr10	92950858	92952041	ENSMUSG00000020017.8	Hal	ENSMUST00000016031.7	nonsense_mediated_decay	+
chr10_92963475_92964107	chr10	92963475	92964107	ENSMUSG00000020017.8	Hal	ENSMUST00000152883.1	processed_transcript	+
chr10_93002272_93004245	chr10	93002272	93004245	ENSMUSG00000036168.8	Ccdc38	ENSMUST00000092215.5	protein_coding	+
chr10_93002272_93004245	chr10	93002272	93004245	ENSMUSG00000036168.8	Ccdc38	ENSMUST00000048345.4	protein_coding	+
chr10_93002272_93004245	chr10	93002272	93004245	ENSMUSG00000015890.2	Amdhd1	ENSMUST00000016034.2	protein_coding	-
chr10_93027507_93027798	chr10	93027507	93027798	ENSMUSG00000036168.8	Ccdc38	ENSMUST00000128786.1	processed_transcript	+
chr10_93051585_93052999	chr10	93051585	93052999	ENSMUSG00000086419.1	4933408J17Rik	ENSMUST00000123452.1	lincRNA	+
chr10_93051585_93052999	chr10	93051585	93052999	ENSMUSG00000020018.6	Snrpf	ENSMUST00000020203.6	protein_coding	-
chr10_93102834_93105533	chr10	93102834	93105533	ENSMUSG00000020019.4	Ntn4	ENSMUST00000147080.1	protein_coding	+
chr10_93102834_93105533	chr10	93102834	93105533	ENSMUSG00000020019.4	Ntn4	ENSMUST00000020204.4	protein_coding	+
chr10_93353770_93354145	chr10	93353770	93354145	ENSMUSG00000036112.7	Metap2	ENSMUST00000047910.7	protein_coding	-
chr10_93378106_93379317	chr10	93378106	93379317	ENSMUSG00000087798.1	SNORA73	ENSMUST00000157173.1	snoRNA	-
chr10_93426581_93426781	chr10	93426581	93426781	ENSMUSG00000065607.1	Mir331	ENSMUST00000083673.1	miRNA	-
chr10_93437122_93437492	chr10	93437122	93437492	ENSMUSG00000036099.9	Vezt	ENSMUST00000148450.1	protein_coding	-
chr10_93483352_93484114	chr10	93483352	93484114	ENSMUSG00000036099.9	Vezt	ENSMUST00000150344.1	protein_coding	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000020021.4	Fgd6	ENSMUST00000020208.4	protein_coding	+
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000154267.1	processed_transcript	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000132735.1	retained_intron	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000092214.4	protein_coding	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000123201.1	protein_coding	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000150704.1	nonsense_mediated_decay	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000118205.1	protein_coding	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000118077.1	protein_coding	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000047711.6	protein_coding	-
chr10_93497717_93499992	chr10	93497717	93499992	ENSMUSG00000036099.9	Vezt	ENSMUST00000119818.1	protein_coding	-
chr10_93534404_93536140	chr10	93534404	93536140	ENSMUSG00000020021.4	Fgd6	ENSMUST00000141143.1	processed_transcript	+
chr10_93610118_93612131	chr10	93610118	93612131	ENSMUSG00000005897.8	Nr2c1	ENSMUST00000105290.2	protein_coding	+
chr10_93610118_93612131	chr10	93610118	93612131	ENSMUSG00000005897.8	Nr2c1	ENSMUST00000092213.4	protein_coding	+
chr10_93660544_93662567	chr10	93660544	93662567	ENSMUSG00000020022.9	Ndufa12	ENSMUST00000020209.9	protein_coding	+
chr10_93660544_93662567	chr10	93660544	93662567	ENSMUSG00000020022.9	Ndufa12	ENSMUST00000125379.1	retained_intron	+
chr10_93774173_93775612	chr10	93774173	93775612	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000147869.1	retained_intron	+
chr10_93774173_93775612	chr10	93774173	93775612	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000132743.1	protein_coding	+
chr10_93774173_93775612	chr10	93774173	93775612	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000139230.1	processed_transcript	+
chr10_93871238_93873014	chr10	93871238	93873014	ENSMUSG00000085409.1	Gm16155	ENSMUST00000155180.1	sense_intronic	+
chr10_93976852_93978675	chr10	93976852	93978675	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000065060.5	protein_coding	+
chr10_93976852_93978675	chr10	93976852	93978675	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000171392.1	protein_coding	+
chr10_94007657_94009827	chr10	94007657	94009827	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000148823.1	protein_coding	+
chr10_94012215_94014334	chr10	94012215	94014334	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000148910.1	protein_coding	+
chr10_94012215_94014334	chr10	94012215	94014334	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000117460.1	protein_coding	+
chr10_94037300_94038194	chr10	94037300	94038194	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000121471.1	protein_coding	+
chr10_94038417_94039242	chr10	94038417	94039242	ENSMUSG00000020023.10	Tmcc3	ENSMUST00000117929.1	protein_coding	+
chr10_94074840_94075066	chr10	94074840	94075066	ENSMUSG00000086269.1	Gm16154	ENSMUST00000146744.1	antisense	-
chr10_94150400_94152252	chr10	94150400	94152252	ENSMUSG00000020024.6	Ccdc41	ENSMUST00000020212.4	protein_coding	+
chr10_94150400_94152252	chr10	94150400	94152252	ENSMUSG00000086635.1	4932415G12Rik	ENSMUST00000151198.1	lincRNA	-
chr10_94405882_94408374	chr10	94405882	94408374	ENSMUSG00000074785.3	Plxnc1	ENSMUST00000099337.2	protein_coding	-
chr10_94410993_94411380	chr10	94410993	94411380	ENSMUSG00000089146.1	7SK	ENSMUST00000158521.1	misc_RNA	+
chr10_94784524_94787157	chr10	94784524	94787157	ENSMUSG00000045867.8	Cradd	ENSMUST00000099332.4	protein_coding	-
chr10_94784524_94787157	chr10	94784524	94787157	ENSMUSG00000045867.8	Cradd	ENSMUST00000099334.4	protein_coding	-
chr10_94784524_94787157	chr10	94784524	94787157	ENSMUSG00000045867.8	Cradd	ENSMUST00000053594.5	protein_coding	-
chr10_94876971_94877565	chr10	94876971	94877565	ENSMUSG00000020027.11	Socs2	ENSMUST00000134918.1	processed_transcript	-
chr10_94877707_94878978	chr10	94877707	94878978	ENSMUSG00000020027.11	Socs2	ENSMUST00000145847.1	processed_transcript	-
chr10_94877707_94878978	chr10	94877707	94878978	ENSMUSG00000020027.11	Socs2	ENSMUST00000129942.1	protein_coding	-
chr10_94877707_94878978	chr10	94877707	94878978	ENSMUSG00000020027.11	Socs2	ENSMUST00000150432.1	protein_coding	-
chr10_94877707_94878978	chr10	94877707	94878978	ENSMUSG00000020027.11	Socs2	ENSMUST00000119917.1	protein_coding	-
chr10_94877707_94878978	chr10	94877707	94878978	ENSMUSG00000020027.11	Socs2	ENSMUST00000170690.1	protein_coding	-
chr10_94877707_94878978	chr10	94877707	94878978	ENSMUSG00000020027.11	Socs2	ENSMUST00000172070.1	protein_coding	-
chr10_94879040_94880853	chr10	94879040	94880853	ENSMUSG00000020027.11	Socs2	ENSMUST00000128363.1	processed_transcript	-
chr10_94879040_94880853	chr10	94879040	94880853	ENSMUSG00000020027.11	Socs2	ENSMUST00000129942.1	protein_coding	-
chr10_94879040_94880853	chr10	94879040	94880853	ENSMUSG00000020027.11	Socs2	ENSMUST00000020215.9	protein_coding	-
chr10_94879040_94880853	chr10	94879040	94880853	ENSMUSG00000020027.11	Socs2	ENSMUST00000170690.1	protein_coding	-
chr10_94879040_94880853	chr10	94879040	94880853	ENSMUSG00000085613.1	5730420D15Rik	ENSMUST00000133183.1	lincRNA	+
chr10_94879040_94880853	chr10	94879040	94880853	ENSMUSG00000020027.11	Socs2	ENSMUST00000135822.1	protein_coding	-
chr10_94963731_94964827	chr10	94963731	94964827	ENSMUSG00000062981.4	Mrpl42	ENSMUST00000075829.2	protein_coding	-
chr10_94976861_94978646	chr10	94976861	94978646	ENSMUSG00000074781.3	Ube2n	ENSMUST00000163581.1	protein_coding	+
chr10_94976861_94978646	chr10	94976861	94978646	ENSMUSG00000074781.3	Ube2n	ENSMUST00000099329.3	protein_coding	+
chr10_95024944_95027578	chr10	95024944	95027578	ENSMUSG00000020029.5	Nudt4	ENSMUST00000020217.5	protein_coding	-
chr10_95361130_95361740	chr10	95361130	95361740	ENSMUSG00000077268.1	SNORA17	ENSMUST00000104080.1	snoRNA	+
chr10_95402310_95404192	chr10	95402310	95404192	ENSMUSG00000036499.7	Eea1	ENSMUST00000053484.6	protein_coding	+
chr10_95625688_95626903	chr10	95625688	95626903	ENSMUSG00000093038.1	AC131596.1	ENSMUST00000175297.1	miRNA	+
chr10_96078825_96081232	chr10	96078825	96081232	ENSMUSG00000036478.7	Btg1	ENSMUST00000038377.7	protein_coding	+
chr10_96941857_96942459	chr10	96941857	96942459	ENSMUSG00000019929.8	Dcn	ENSMUST00000105287.2	protein_coding	+
chr10_97028031_97028555	chr10	97028031	97028555	ENSMUSG00000036446.4	Lum	ENSMUST00000038160.4	protein_coding	+
chr10_97155379_97157331	chr10	97155379	97157331	ENSMUSG00000047025.4	4921510H08Rik	ENSMUST00000060703.4	protein_coding	+
chr10_97188724_97189196	chr10	97188724	97189196	ENSMUSG00000079183.2	C030005K15Rik	ENSMUST00000166373.1	protein_coding	-
chr10_97206685_97207557	chr10	97206685	97207557	ENSMUSG00000089097.1	SNORA17	ENSMUST00000158472.1	snoRNA	-
chr10_98376001_98378555	chr10	98376001	98378555	ENSMUSG00000019943.8	Atp2b1	ENSMUST00000020107.7	protein_coding	+
chr10_98376001_98378555	chr10	98376001	98378555	ENSMUSG00000019943.8	Atp2b1	ENSMUST00000105284.2	protein_coding	+
chr10_98569067_98571482	chr10	98569067	98571482	ENSMUSG00000019952.8	Poc1b	ENSMUST00000020113.8	protein_coding	+
chr10_98569067_98571482	chr10	98569067	98571482	ENSMUSG00000019952.8	Poc1b	ENSMUST00000159228.1	protein_coding	+
chr10_98569067_98571482	chr10	98569067	98571482	ENSMUSG00000019952.8	Poc1b	ENSMUST00000159990.1	protein_coding	+
chr10_98569067_98571482	chr10	98569067	98571482	ENSMUSG00000090035.1	Galnt4	ENSMUST00000161240.1	protein_coding	+
chr10_98588850_98589130	chr10	98588850	98589130	ENSMUSG00000055108.5	Phxr2	ENSMUST00000060761.5	protein_coding	-
chr10_98725306_98727604	chr10	98725306	98727604	ENSMUSG00000019960.6	Dusp6	ENSMUST00000155150.2	protein_coding	+
chr10_98725306_98727604	chr10	98725306	98727604	ENSMUSG00000019960.6	Dusp6	ENSMUST00000020118.4	protein_coding	+
chr10_98906165_98906453	chr10	98906165	98906453	ENSMUSG00000090665.1	Gad1-ps	ENSMUST00000167243.1	protein_coding	+
chr10_99221231_99222399	chr10	99221231	99222399	ENSMUSG00000046934.4	Csl	ENSMUST00000056085.4	protein_coding	-
chr10_99478010_99479420	chr10	99478010	99479420	ENSMUSG00000019966.10	Kitl	ENSMUST00000105283.1	protein_coding	+
chr10_99478010_99479420	chr10	99478010	99479420	ENSMUSG00000019966.10	Kitl	ENSMUST00000130190.1	protein_coding	+
chr10_99478010_99479420	chr10	99478010	99479420	ENSMUSG00000019966.10	Kitl	ENSMUST00000020129.7	protein_coding	+
chr10_99478010_99479420	chr10	99478010	99479420	ENSMUSG00000019966.10	Kitl	ENSMUST00000099320.3	protein_coding	+
chr10_99606996_99607488	chr10	99606996	99607488	ENSMUSG00000077034.1	AC167229.1	ENSMUST00000103846.1	miRNA	+
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000019971.8	Cep290	ENSMUST00000164751.1	protein_coding	+
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000019971.8	Cep290	ENSMUST00000099316.3	protein_coding	+
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000019971.8	Cep290	ENSMUST00000020148.8	protein_coding	+
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000036676.8	Tmtc3	ENSMUST00000134477.1	protein_coding	-
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000036676.8	Tmtc3	ENSMUST00000128009.1	protein_coding	-
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000036676.8	Tmtc3	ENSMUST00000130883.1	retained_intron	-
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000036676.8	Tmtc3	ENSMUST00000099318.3	protein_coding	-
chr10_99949234_99950834	chr10	99949234	99950834	ENSMUSG00000036676.8	Tmtc3	ENSMUST00000058154.8	protein_coding	-
chr10_100050979_100052296	chr10	100050979	100052296	ENSMUSG00000046567.9	4930430F08Rik	ENSMUST00000054471.8	protein_coding	-
chr10_101006922_101007748	chr10	101006922	101007748	ENSMUSG00000087723.1	SNORA17	ENSMUST00000157098.1	snoRNA	+
chr10_101144061_101145000	chr10	101144061	101145000	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000146230.1	retained_intron	+
chr10_101144061_101145000	chr10	101144061	101145000	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000134930.1	processed_transcript	+
chr10_101144061_101145000	chr10	101144061	101145000	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000127504.1	protein_coding	+
chr10_101144061_101145000	chr10	101144061	101145000	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000156751.1	protein_coding	+
chr10_101621348_101622162	chr10	101621348	101622162	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000138522.1	protein_coding	+
chr10_101621348_101622162	chr10	101621348	101622162	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000163753.1	protein_coding	+
chr10_101621348_101622162	chr10	101621348	101622162	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000130580.1	processed_transcript	+
chr10_101621348_101622162	chr10	101621348	101622162	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000138016.1	protein_coding	+
chr10_101621348_101622162	chr10	101621348	101622162	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000143640.1	processed_transcript	+
chr10_101621348_101622162	chr10	101621348	101622162	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000020039.6	protein_coding	+
chr10_101836608_101837205	chr10	101836608	101837205	ENSMUSG00000019888.8	Mgat4c	ENSMUST00000120748.1	protein_coding	+
chr10_101974041_101975504	chr10	101974041	101975504	ENSMUSG00000044921.4	Rassf9	ENSMUST00000055355.4	protein_coding	+
chr10_102489346_102491510	chr10	102489346	102491510	ENSMUSG00000036602.6	Alx1	ENSMUST00000167156.1	protein_coding	-
chr10_102489346_102491510	chr10	102489346	102491510	ENSMUSG00000036602.6	Alx1	ENSMUST00000040859.5	protein_coding	-
chr10_102489346_102491510	chr10	102489346	102491510	ENSMUSG00000092348.1	Alx1	ENSMUST00000173897.1	protein_coding	-
chr10_102492330_102492921	chr10	102492330	102492921	ENSMUSG00000090638.1	Gm17028	ENSMUST00000170026.1	lincRNA	-
chr10_102698100_102699345	chr10	102698100	102699345	ENSMUSG00000019892.6	Lrriq1	ENSMUST00000123364.1	protein_coding	-
chr10_102698100_102699345	chr10	102698100	102699345	ENSMUSG00000019892.6	Lrriq1	ENSMUST00000020043.5	protein_coding	-
chr10_102698100_102699345	chr10	102698100	102699345	ENSMUSG00000019892.6	Lrriq1	ENSMUST00000166240.1	protein_coding	-
chr10_102829751_102832252	chr10	102829751	102832252	ENSMUSG00000019894.6	Slc6a15	ENSMUST00000074204.3	protein_coding	+
chr10_104302148_104302543	chr10	104302148	104302543	ENSMUSG00000089019.1	U6	ENSMUST00000158394.1	snRNA	-
chr10_104577067_104577308	chr10	104577067	104577308	ENSMUSG00000077407.1	SNORA17	ENSMUST00000104219.1	snoRNA	-
chr10_104675324_104675580	chr10	104675324	104675580	ENSMUSG00000089855.1	Gm15662	ENSMUST00000160554.1	transcribed_unprocessed_pseudogene	+
chr10_104944193_104944501	chr10	104944193	104944501	ENSMUSG00000084399.1	Gm15666	ENSMUST00000118054.1	transcribed_processed_pseudogene	-
chr10_104973015_104973274	chr10	104973015	104973274	ENSMUSG00000036019.8	Tmtc2	ENSMUST00000139741.1	processed_transcript	-
chr10_105010394_105012685	chr10	105010394	105012685	ENSMUSG00000085282.2	Gm15663	ENSMUST00000161364.1	antisense	+
chr10_105010394_105012685	chr10	105010394	105012685	ENSMUSG00000085282.2	Gm15663	ENSMUST00000145794.2	lincRNA	+
chr10_105010394_105012685	chr10	105010394	105012685	ENSMUSG00000036019.8	Tmtc2	ENSMUST00000143691.1	retained_intron	-
chr10_105010394_105012685	chr10	105010394	105012685	ENSMUSG00000036019.8	Tmtc2	ENSMUST00000061506.8	protein_coding	-
chr10_105277684_105279054	chr10	105277684	105279054	ENSMUSG00000019897.8	Ccdc59	ENSMUST00000020049.8	protein_coding	+
chr10_105277684_105279054	chr10	105277684	105279054	ENSMUSG00000019897.8	Ccdc59	ENSMUST00000133538.1	retained_intron	+
chr10_105277684_105279054	chr10	105277684	105279054	ENSMUSG00000019897.8	Ccdc59	ENSMUST00000155406.1	retained_intron	+
chr10_105277684_105279054	chr10	105277684	105279054	ENSMUSG00000036009.8	BC067068	ENSMUST00000046638.8	protein_coding	-
chr10_105277684_105279054	chr10	105277684	105279054	ENSMUSG00000036009.8	BC067068	ENSMUST00000171555.1	protein_coding	-
chr10_105287209_105288475	chr10	105287209	105288475	ENSMUSG00000080525.1	AC132471.1	ENSMUST00000116875.1	miRNA	+
chr10_105492162_105493022	chr10	105492162	105493022	ENSMUSG00000088084.1	SNORA17	ENSMUST00000157459.1	snoRNA	-
chr10_105629808_105630425	chr10	105629808	105630425	ENSMUSG00000056877.2	Gm7263	ENSMUST00000071120.2	protein_coding	-
chr10_105905791_105908398	chr10	105905791	105908398	ENSMUSG00000053825.7	Ppfia2	ENSMUST00000029404.8	protein_coding	+
chr10_105905791_105908398	chr10	105905791	105908398	ENSMUSG00000053825.7	Ppfia2	ENSMUST00000169303.1	protein_coding	+
chr10_105905791_105908398	chr10	105905791	105908398	ENSMUSG00000053825.7	Ppfia2	ENSMUST00000164533.1	protein_coding	+
chr10_105905791_105908398	chr10	105905791	105908398	ENSMUSG00000079044.2	C230021G24Rik	ENSMUST00000164347.1	lincRNA	-
chr10_106558381_106561633	chr10	106558381	106561633	ENSMUSG00000035948.6	Acss3	ENSMUST00000065567.5	processed_transcript	-
chr10_106558381_106561633	chr10	106558381	106561633	ENSMUSG00000035948.6	Acss3	ENSMUST00000044668.4	protein_coding	-
chr10_106558381_106561633	chr10	106558381	106561633	ENSMUSG00000035948.6	Acss3	ENSMUST00000165067.1	protein_coding	-
chr10_106574081_106575277	chr10	106574081	106575277	ENSMUSG00000088465.1	SNORA17	ENSMUST00000157840.1	snoRNA	+
chr10_106708227_106710835	chr10	106708227	106710835	ENSMUSG00000019906.8	Lin7a	ENSMUST00000020057.8	protein_coding	+
chr10_106708227_106710835	chr10	106708227	106710835	ENSMUSG00000019906.8	Lin7a	ENSMUST00000105280.3	protein_coding	+
chr10_106923045_106923298	chr10	106923045	106923298	ENSMUSG00000000435.1	Myf5	ENSMUST00000000445.1	protein_coding	-
chr10_106930162_106931644	chr10	106930162	106931644	ENSMUSG00000035923.3	Myf6	ENSMUST00000044210.3	protein_coding	-
chr10_107156729_107157532	chr10	107156729	107157532	ENSMUSG00000035916.5	Ptprq	ENSMUST00000043930.4	protein_coding	-
chr10_107156729_107157532	chr10	107156729	107157532	ENSMUSG00000035916.5	Ptprq	ENSMUST00000050702.7	protein_coding	-
chr10_107598187_107600571	chr10	107598187	107600571	ENSMUSG00000019907.8	Ppp1r12a	ENSMUST00000105279.2	protein_coding	+
chr10_107598187_107600571	chr10	107598187	107600571	ENSMUSG00000019907.8	Ppp1r12a	ENSMUST00000167874.1	protein_coding	+
chr10_107598187_107600571	chr10	107598187	107600571	ENSMUSG00000019907.8	Ppp1r12a	ENSMUST00000070663.5	protein_coding	+
chr10_107768618_107771052	chr10	107768618	107771052	ENSMUSG00000035873.6	Pawr	ENSMUST00000095313.3	protein_coding	+
chr10_107768618_107771052	chr10	107768618	107771052	ENSMUSG00000035873.6	Pawr	ENSMUST00000105277.1	protein_coding	+
chr10_108446935_108449241	chr10	108446935	108449241	ENSMUSG00000035864.8	Syt1	ENSMUST00000146618.1	retained_intron	-
chr10_108446935_108449241	chr10	108446935	108449241	ENSMUSG00000035864.8	Syt1	ENSMUST00000064054.7	protein_coding	-
chr10_108446935_108449241	chr10	108446935	108449241	ENSMUSG00000035864.8	Syt1	ENSMUST00000105276.1	protein_coding	-
chr10_109201611_109203054	chr10	109201611	109203054	ENSMUSG00000020181.9	Nav3	ENSMUST00000163071.1	protein_coding	-
chr10_109340334_109341704	chr10	109340334	109341704	ENSMUSG00000020181.9	Nav3	ENSMUST00000160159.1	retained_intron	-
chr10_109340334_109341704	chr10	109340334	109341704	ENSMUSG00000020181.9	Nav3	ENSMUST00000161798.1	retained_intron	-
chr10_109437040_109437298	chr10	109437040	109437298	ENSMUSG00000020181.9	Nav3	ENSMUST00000032719.7	protein_coding	-
chr10_110181677_110183072	chr10	110181677	110183072	ENSMUSG00000020185.10	E2f7	ENSMUST00000173294.1	processed_transcript	+
chr10_110181677_110183072	chr10	110181677	110183072	ENSMUSG00000020185.10	E2f7	ENSMUST00000174857.1	protein_coding	+
chr10_110181677_110183072	chr10	110181677	110183072	ENSMUSG00000020185.10	E2f7	ENSMUST00000174810.1	retained_intron	+
chr10_110181677_110183072	chr10	110181677	110183072	ENSMUSG00000020185.10	E2f7	ENSMUST00000073781.5	protein_coding	+
chr10_110181677_110183072	chr10	110181677	110183072	ENSMUSG00000020185.10	E2f7	ENSMUST00000173471.1	protein_coding	+
chr10_110181677_110183072	chr10	110181677	110183072	ENSMUSG00000020185.10	E2f7	ENSMUST00000173634.1	protein_coding	+
chr10_110355506_110358071	chr10	110355506	110358071	ENSMUSG00000020186.5	Csrp2	ENSMUST00000171226.1	protein_coding	+
chr10_110355506_110358071	chr10	110355506	110358071	ENSMUSG00000020186.5	Csrp2	ENSMUST00000020403.4	protein_coding	+
chr10_110446190_110448740	chr10	110446190	110448740	ENSMUSG00000035798.7	Zdhhc17	ENSMUST00000099285.3	protein_coding	-
chr10_110446190_110448740	chr10	110446190	110448740	ENSMUSG00000035798.7	Zdhhc17	ENSMUST00000041723.7	protein_coding	-
chr10_110600990_110603170	chr10	110600990	110603170	ENSMUSG00000020189.7	Osbpl8	ENSMUST00000105275.1	protein_coding	+
chr10_110600990_110603170	chr10	110600990	110603170	ENSMUSG00000020189.7	Osbpl8	ENSMUST00000095310.1	protein_coding	+
chr10_110735025_110737062	chr10	110735025	110737062	ENSMUSG00000035759.3	Bbs10	ENSMUST00000040454.3	protein_coding	+
chr10_110909743_110911487	chr10	110909743	110911487	ENSMUSG00000058799.7	Nap1l1	ENSMUST00000065917.8	protein_coding	+
chr10_110909743_110911487	chr10	110909743	110911487	ENSMUSG00000058799.7	Nap1l1	ENSMUST00000166519.1	protein_coding	+
chr10_110943070_110945308	chr10	110943070	110945308	ENSMUSG00000020205.6	Phlda1	ENSMUST00000164773.1	protein_coding	+
chr10_110943070_110945308	chr10	110943070	110945308	ENSMUSG00000020205.6	Phlda1	ENSMUST00000020424.6	protein_coding	+
chr10_111031102_111033056	chr10	111031102	111033056	ENSMUSG00000087191.1	4933440J02Rik	ENSMUST00000143669.1	lincRNA	-
chr10_111409442_111410393	chr10	111409442	111410393	ENSMUSG00000063334.9	Krr1	ENSMUST00000163048.1	protein_coding	+
chr10_111409442_111410393	chr10	111409442	111410393	ENSMUSG00000063334.9	Krr1	ENSMUST00000162678.1	retained_intron	+
chr10_111409442_111410393	chr10	111409442	111410393	ENSMUSG00000063334.9	Krr1	ENSMUST00000075924.7	retained_intron	+
chr10_111409442_111410393	chr10	111409442	111410393	ENSMUSG00000063334.9	Krr1	ENSMUST00000099281.4	protein_coding	+
chr10_111409442_111410393	chr10	111409442	111410393	ENSMUSG00000063334.9	Krr1	ENSMUST00000174653.1	protein_coding	+
chr10_111432820_111434461	chr10	111432820	111434461	ENSMUSG00000056888.5	Glipr1	ENSMUST00000174201.1	processed_transcript	-
chr10_111432820_111434461	chr10	111432820	111434461	ENSMUSG00000056888.5	Glipr1	ENSMUST00000074805.5	protein_coding	-
chr10_111439071_111440258	chr10	111439071	111440258	ENSMUSG00000056888.5	Glipr1	ENSMUST00000159550.1	processed_transcript	-
chr10_111439071_111440258	chr10	111439071	111440258	ENSMUSG00000056888.5	Glipr1	ENSMUST00000162508.2	protein_coding	-
chr10_111496829_111497619	chr10	111496829	111497619	ENSMUSG00000020213.6	Glipr1l1	ENSMUST00000073617.4	protein_coding	+
chr10_111520235_111520865	chr10	111520235	111520865	ENSMUSG00000020214.4	Glipr1l2	ENSMUST00000148897.1	protein_coding	+
chr10_111520235_111520865	chr10	111520235	111520865	ENSMUSG00000020214.4	Glipr1l2	ENSMUST00000020434.3	protein_coding	+
chr10_111600274_111601024	chr10	111600274	111601024	ENSMUSG00000035694.8	Caps2	ENSMUST00000092176.1	protein_coding	+
chr10_111706906_111709405	chr10	111706906	111709405	ENSMUSG00000035681.6	Kcnc2	ENSMUST00000092175.2	protein_coding	+
chr10_112365349_112366851	chr10	112365349	112366851	ENSMUSG00000074748.2	Atxn7l3b	ENSMUST00000165438.1	processed_transcript	-
chr10_112365349_112366851	chr10	112365349	112366851	ENSMUSG00000074748.2	Atxn7l3b	ENSMUST00000099276.2	protein_coding	-
chr10_114237284_114240400	chr10	114237284	114240400	ENSMUSG00000084865.1	Gm15723	ENSMUST00000139331.1	antisense	+
chr10_114237284_114240400	chr10	114237284	114240400	ENSMUSG00000050663.7	Trhde	ENSMUST00000152282.1	retained_intron	-
chr10_114237284_114240400	chr10	114237284	114240400	ENSMUSG00000050663.7	Trhde	ENSMUST00000152702.1	retained_intron	-
chr10_114237284_114240400	chr10	114237284	114240400	ENSMUSG00000050663.7	Trhde	ENSMUST00000061632.7	protein_coding	-
chr10_114612249_114613265	chr10	114612249	114613265	ENSMUSG00000006764.8	Tph2	ENSMUST00000155794.1	processed_transcript	-
chr10_114621350_114622292	chr10	114621350	114622292	ENSMUSG00000006764.8	Tph2	ENSMUST00000006949.8	protein_coding	-
chr10_114687936_114689795	chr10	114687936	114689795	ENSMUSG00000020130.8	Tbc1d15	ENSMUST00000020339.8	protein_coding	-
chr10_114751133_114753684	chr10	114751133	114753684	ENSMUSG00000020132.8	Rab21	ENSMUST00000163154.1	protein_coding	-
chr10_114751133_114753684	chr10	114751133	114753684	ENSMUSG00000020132.8	Rab21	ENSMUST00000020343.7	protein_coding	-
chr10_114798793_114800716	chr10	114798793	114800716	ENSMUSG00000069520.5	Tmem19	ENSMUST00000092170.5	protein_coding	-
chr10_114820582_114823152	chr10	114820582	114823152	ENSMUSG00000034163.9	Zfc3h1	ENSMUST00000036044.8	protein_coding	+
chr10_114820582_114823152	chr10	114820582	114823152	ENSMUSG00000034163.9	Zfc3h1	ENSMUST00000168293.1	protein_coding	+
chr10_114820582_114823152	chr10	114820582	114823152	ENSMUSG00000020137.4	Thap2	ENSMUST00000020346.4	protein_coding	-
chr10_114864215_114864662	chr10	114864215	114864662	ENSMUSG00000034163.9	Zfc3h1	ENSMUST00000127283.1	retained_intron	+
chr10_115022613_115025376	chr10	115022613	115025376	ENSMUSG00000020140.9	Lgr5	ENSMUST00000129309.1	processed_transcript	-
chr10_115022613_115025376	chr10	115022613	115025376	ENSMUSG00000020140.9	Lgr5	ENSMUST00000149008.1	retained_intron	-
chr10_115022613_115025376	chr10	115022613	115025376	ENSMUSG00000020140.9	Lgr5	ENSMUST00000105272.1	retained_intron	-
chr10_115022613_115025376	chr10	115022613	115025376	ENSMUSG00000020140.9	Lgr5	ENSMUST00000172806.1	protein_coding	-
chr10_115022613_115025376	chr10	115022613	115025376	ENSMUSG00000020140.9	Lgr5	ENSMUST00000173740.1	protein_coding	-
chr10_115022613_115025376	chr10	115022613	115025376	ENSMUSG00000020140.9	Lgr5	ENSMUST00000020350.8	protein_coding	-
chr10_115254057_115255549	chr10	115254057	115255549	ENSMUSG00000034127.7	Tspan8	ENSMUST00000035563.7	protein_coding	+
chr10_115254057_115255549	chr10	115254057	115255549	ENSMUSG00000034127.7	Tspan8	ENSMUST00000080630.3	protein_coding	+
chr10_115454726_115456950	chr10	115454726	115456950	ENSMUSG00000020151.9	Ptprr	ENSMUST00000063470.4	protein_coding	+
chr10_115454726_115456950	chr10	115454726	115456950	ENSMUSG00000020151.9	Ptprr	ENSMUST00000142617.1	processed_transcript	+
chr10_115550637_115551515	chr10	115550637	115551515	ENSMUSG00000074734.2	4933416C03Rik	ENSMUST00000099261.2	protein_coding	-
chr10_115580940_115581329	chr10	115580940	115581329	ENSMUSG00000020151.9	Ptprr	ENSMUST00000105271.2	protein_coding	+
chr10_115614314_115615129	chr10	115614314	115615129	ENSMUSG00000020151.9	Ptprr	ENSMUST00000148731.1	protein_coding	+
chr10_115614314_115615129	chr10	115614314	115615129	ENSMUSG00000020151.9	Ptprr	ENSMUST00000155606.1	protein_coding	+
chr10_115614314_115615129	chr10	115614314	115615129	ENSMUSG00000020151.9	Ptprr	ENSMUST00000128399.1	protein_coding	+
chr10_115633356_115634899	chr10	115633356	115634899	ENSMUSG00000020151.9	Ptprr	ENSMUST00000124369.1	processed_transcript	+
chr10_115712374_115712660	chr10	115712374	115712660	ENSMUSG00000020154.8	Ptprb	ENSMUST00000020363.3	protein_coding	+
chr10_115738285_115738992	chr10	115738285	115738992	ENSMUSG00000020154.8	Ptprb	ENSMUST00000092167.5	protein_coding	+
chr10_115854696_115854919	chr10	115854696	115854919	ENSMUSG00000020164.7	1700058G18Rik	ENSMUST00000134586.1	antisense	+
chr10_115855300_115855552	chr10	115855300	115855552	ENSMUSG00000020164.7	1700058G18Rik	ENSMUST00000134586.1	antisense	+
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000085837.1	4933400F03Rik	ENSMUST00000144020.1	processed_transcript	+
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000059769.7	4933400F03Rik	ENSMUST00000080943.7	pseudogene	+
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000085837.1	4933400F03Rik	ENSMUST00000127070.1	processed_transcript	+
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000085837.1	4933400F03Rik	ENSMUST00000123348.1	processed_transcript	+
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000054934.4	Kcnmb4	ENSMUST00000087965.4	protein_coding	-
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000054934.4	Kcnmb4	ENSMUST00000164271.1	protein_coding	-
chr10_115909237_115911753	chr10	115909237	115911753	ENSMUSG00000054934.4	Kcnmb4	ENSMUST00000068233.4	protein_coding	-
chr10_115965759_115966025	chr10	115965759	115966025	ENSMUSG00000020166.7	Cnot2	ENSMUST00000105266.2	protein_coding	-
chr10_115986134_115986511	chr10	115986134	115986511	ENSMUSG00000020166.7	Cnot2	ENSMUST00000164088.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000052291.7	5330438D12Rik	ENSMUST00000064101.7	pseudogene	+
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000167644.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000165527.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000020374.5	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000171944.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000169507.1	nonsense_mediated_decay	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000166166.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000164383.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000171214.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000169937.1	processed_transcript	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000167706.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000169921.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000105265.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000105267.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000166506.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000169576.1	nonsense_mediated_decay	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000168036.1	protein_coding	-
chr10_116017573_116020250	chr10	116017573	116020250	ENSMUSG00000020166.7	Cnot2	ENSMUST00000064218.3	protein_coding	-
chr10_116111466_116111993	chr10	116111466	116111993	ENSMUSG00000086857.1	Gm16913	ENSMUST00000136869.1	lincRNA	+
chr10_116385984_116387984	chr10	116385984	116387984	ENSMUSG00000064181.4	Rab3ip	ENSMUST00000020375.6	protein_coding	-
chr10_116402363_116403507	chr10	116402363	116403507	ENSMUSG00000031294.2	D630029K05Rik	ENSMUST00000033651.2	protein_coding	+
chr10_116423438_116424843	chr10	116423438	116424843	ENSMUSG00000020169.4	Best3	ENSMUST00000020378.4	protein_coding	+
chr10_116482266_116483805	chr10	116482266	116483805	ENSMUSG00000060187.4	Lrrc10	ENSMUST00000073834.4	protein_coding	+
chr10_116500047_116501241	chr10	116500047	116501241	ENSMUSG00000034024.7	Cct2	ENSMUST00000047672.7	protein_coding	-
chr10_116584895_116586762	chr10	116584895	116586762	ENSMUSG00000020170.3	Frs2	ENSMUST00000020381.3	protein_coding	-
chr10_116660715_116662461	chr10	116660715	116662461	ENSMUSG00000020171.6	Yeats4	ENSMUST00000172290.1	protein_coding	-
chr10_116660715_116662461	chr10	116660715	116662461	ENSMUSG00000020171.6	Yeats4	ENSMUST00000020382.6	protein_coding	-
chr10_116718992_116719537	chr10	116718992	116719537	ENSMUSG00000069516.6	Lyz2	ENSMUST00000092163.6	protein_coding	-
chr10_116812629_116815040	chr10	116812629	116815040	ENSMUSG00000055531.5	Cpsf6	ENSMUST00000069168.5	protein_coding	-
chr10_117065862_117067076	chr10	117065862	117067076	ENSMUSG00000020183.5	Cpm	ENSMUST00000020399.5	protein_coding	+
chr10_117065862_117067076	chr10	117065862	117067076	ENSMUSG00000020183.5	Cpm	ENSMUST00000123374.1	retained_intron	+
chr10_117065862_117067076	chr10	117065862	117067076	ENSMUSG00000020183.5	Cpm	ENSMUST00000138020.1	processed_transcript	+
chr10_117112483_117114441	chr10	117112483	117114441	ENSMUSG00000020183.5	Cpm	ENSMUST00000141991.1	retained_intron	+
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000151725.1	retained_intron	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000147823.1	processed_transcript	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000126022.1	processed_transcript	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000137102.1	processed_transcript	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000132277.1	retained_intron	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000155285.1	nonsense_mediated_decay	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000020408.8	protein_coding	-
chr10_117146449_117149013	chr10	117146449	117149013	ENSMUSG00000020184.8	Mdm2	ENSMUST00000105263.1	protein_coding	-
chr10_117182470_117184477	chr10	117182470	117184477	ENSMUSG00000060181.5	Slc35e3	ENSMUST00000079041.5	protein_coding	-
chr10_117229161_117230941	chr10	117229161	117230941	ENSMUSG00000052798.6	Nup107	ENSMUST00000064848.5	protein_coding	-
chr10_117229161_117230941	chr10	117229161	117230941	ENSMUSG00000052798.6	Nup107	ENSMUST00000167943.1	protein_coding	-
chr10_117281843_117283835	chr10	117281843	117283835	ENSMUSG00000052681.7	Rap1b	ENSMUST00000064667.7	protein_coding	-
chr10_117578183_117579725	chr10	117578183	117579725	ENSMUSG00000020212.7	Mdm1	ENSMUST00000163238.1	protein_coding	+
chr10_117578183_117579725	chr10	117578183	117579725	ENSMUSG00000020212.7	Mdm1	ENSMUST00000020437.5	protein_coding	+
chr10_117578183_117579725	chr10	117578183	117579725	ENSMUSG00000020212.7	Mdm1	ENSMUST00000164077.1	protein_coding	+
chr10_117578183_117579725	chr10	117578183	117579725	ENSMUSG00000020212.7	Mdm1	ENSMUST00000169817.1	protein_coding	+
chr10_117877595_117878254	chr10	117877595	117878254	ENSMUSG00000055170.3	Ifng	ENSMUST00000068592.3	protein_coding	+
chr10_118297443_118297924	chr10	118297443	118297924	ENSMUSG00000050709.4	4932442E05Rik	ENSMUST00000059966.4	protein_coding	+
chr10_118305435_118307700	chr10	118305435	118307700	ENSMUSG00000028630.8	Dyrk2	ENSMUST00000004281.8	protein_coding	-
chr10_118649516_118649868	chr10	118649516	118649868	ENSMUSG00000020114.6	Cand1	ENSMUST00000149155.1	retained_intron	-
chr10_118676087_118678376	chr10	118676087	118678376	ENSMUSG00000020114.6	Cand1	ENSMUST00000126373.1	protein_coding	-
chr10_118676087_118678376	chr10	118676087	118678376	ENSMUSG00000020114.6	Cand1	ENSMUST00000020315.6	protein_coding	-
chr10_118890404_118892723	chr10	118890404	118892723	ENSMUSG00000034813.10	Grip1	ENSMUST00000147356.1	protein_coding	+
chr10_118890404_118892723	chr10	118890404	118892723	ENSMUSG00000034813.10	Grip1	ENSMUST00000077871.6	protein_coding	+
chr10_118890404_118892723	chr10	118890404	118892723	ENSMUSG00000034813.10	Grip1	ENSMUST00000041962.8	protein_coding	+
chr10_118890404_118892723	chr10	118890404	118892723	ENSMUSG00000085454.1	Gm16320	ENSMUST00000146294.1	antisense	-
chr10_118890404_118892723	chr10	118890404	118892723	ENSMUSG00000085454.1	Gm16320	ENSMUST00000127706.1	antisense	-
chr10_118890404_118892723	chr10	118890404	118892723	ENSMUSG00000085454.1	Gm16320	ENSMUST00000154566.1	antisense	-
chr10_119198274_119199776	chr10	119198274	119199776	ENSMUSG00000084764.1	4930564G21Rik	ENSMUST00000153898.1	antisense	-
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000105262.2	protein_coding	+
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000147454.1	protein_coding	+
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000147598.1	retained_intron	+
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000138410.1	protein_coding	+
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000144825.1	protein_coding	+
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000148954.1	protein_coding	+
chr10_119255320_119257302	chr10	119255320	119257302	ENSMUSG00000034813.10	Grip1	ENSMUST00000144959.1	protein_coding	+
chr10_119289239_119289672	chr10	119289239	119289672	ENSMUSG00000085418.1	4930483C13Rik	ENSMUST00000135940.1	antisense	-
chr10_119289239_119289672	chr10	119289239	119289672	ENSMUSG00000085418.1	4930483C13Rik	ENSMUST00000126965.1	antisense	-
chr10_119429840_119430089	chr10	119429840	119430089	ENSMUSG00000034813.10	Grip1	ENSMUST00000130387.1	protein_coding	+
chr10_119429840_119430089	chr10	119429840	119430089	ENSMUSG00000034813.10	Grip1	ENSMUST00000105261.2	protein_coding	+
chr10_119429840_119430089	chr10	119429840	119430089	ENSMUSG00000034813.10	Grip1	ENSMUST00000154238.1	protein_coding	+
chr10_119429840_119430089	chr10	119429840	119430089	ENSMUSG00000034813.10	Grip1	ENSMUST00000081260.2	nonsense_mediated_decay	+
chr10_119548943_119550835	chr10	119548943	119550835	ENSMUSG00000020228.5	Helb	ENSMUST00000154501.1	nonsense_mediated_decay	-
chr10_119548943_119550835	chr10	119548943	119550835	ENSMUSG00000020228.5	Helb	ENSMUST00000020449.5	protein_coding	-
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000156247.1	processed_transcript	+
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000145015.1	processed_transcript	+
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000156877.1	protein_coding	+
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000135794.1	processed_transcript	+
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020227.4	Irak3	ENSMUST00000143100.1	retained_intron	-
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020227.4	Irak3	ENSMUST00000135106.1	nonsense_mediated_decay	-
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020227.4	Irak3	ENSMUST00000145665.1	protein_coding	-
chr10_119638053_119640237	chr10	119638053	119640237	ENSMUSG00000020227.4	Irak3	ENSMUST00000020448.4	protein_coding	-
chr10_119645458_119647505	chr10	119645458	119647505	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000020446.4	protein_coding	+
chr10_119645458_119647505	chr10	119645458	119647505	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000134797.1	protein_coding	+
chr10_119645458_119647505	chr10	119645458	119647505	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000141206.1	nonsense_mediated_decay	+
chr10_119656703_119658221	chr10	119656703	119658221	ENSMUSG00000020225.4	Tmbim4	ENSMUST00000134203.1	retained_intron	+
chr10_119663324_119665062	chr10	119663324	119665062	ENSMUSG00000020224.8	Llph	ENSMUST00000020444.8	protein_coding	+
chr10_119663324_119665062	chr10	119663324	119665062	ENSMUSG00000020224.8	Llph	ENSMUST00000130198.1	protein_coding	+
chr10_119801106_119801328	chr10	119801106	119801328	ENSMUSG00000034764.9	1700006J14Rik	ENSMUST00000041178.5	processed_transcript	+
chr10_119801106_119801328	chr10	119801106	119801328	ENSMUSG00000034764.9	1700006J14Rik	ENSMUST00000160091.1	processed_transcript	+
chr10_119801106_119801328	chr10	119801106	119801328	ENSMUSG00000034764.9	1700006J14Rik	ENSMUST00000159621.1	processed_transcript	+
chr10_119801106_119801328	chr10	119801106	119801328	ENSMUSG00000034764.9	1700006J14Rik	ENSMUST00000161511.1	processed_transcript	+
chr10_119912211_119914404	chr10	119912211	119914404	ENSMUSG00000056758.8	Hmga2	ENSMUST00000159310.1	retained_intron	-
chr10_119912211_119914404	chr10	119912211	119914404	ENSMUSG00000056758.8	Hmga2	ENSMUST00000072777.7	protein_coding	-
chr10_119912211_119914404	chr10	119912211	119914404	ENSMUSG00000056758.8	Hmga2	ENSMUST00000159699.1	protein_coding	-
chr10_120238259_120239332	chr10	120238259	120239332	ENSMUSG00000086444.1	Gm15961	ENSMUST00000156090.1	sense_intronic	-
chr10_120287516_120288974	chr10	120287516	120288974	ENSMUSG00000051236.7	Msrb3	ENSMUST00000139961.1	processed_transcript	-
chr10_120294423_120295390	chr10	120294423	120295390	ENSMUSG00000087480.1	Gm15910	ENSMUST00000127564.1	processed_transcript	+
chr10_120335352_120336776	chr10	120335352	120336776	ENSMUSG00000086522.1	Gm4473	ENSMUST00000145987.1	antisense	+
chr10_120335352_120336776	chr10	120335352	120336776	ENSMUSG00000051236.7	Msrb3	ENSMUST00000092143.5	protein_coding	-
chr10_120365309_120365605	chr10	120365309	120365605	ENSMUSG00000082936.1	Gm16166	ENSMUST00000118291.1	transcribed_processed_pseudogene	+
chr10_120414704_120417237	chr10	120414704	120417237	ENSMUSG00000048661.8	Lemd3	ENSMUST00000119093.1	protein_coding	-
chr10_120414704_120417237	chr10	120414704	120417237	ENSMUSG00000048661.8	Lemd3	ENSMUST00000119944.1	protein_coding	-
chr10_120470166_120471591	chr10	120470166	120471591	ENSMUSG00000020218.4	Wif1	ENSMUST00000020439.4	protein_coding	+
chr10_120520614_120520905	chr10	120520614	120520905	ENSMUSG00000020218.4	Wif1	ENSMUST00000145691.1	processed_transcript	+
chr10_120746808_120748507	chr10	120746808	120748507	ENSMUSG00000052302.5	Tbc1d30	ENSMUST00000064107.5	protein_coding	-
chr10_120779295_120780316	chr10	120779295	120780316	ENSMUSG00000078107.2	Gm4478	ENSMUST00000078515.4	retrotransposed	+
chr10_120801387_120803434	chr10	120801387	120803434	ENSMUSG00000034707.6	Gns	ENSMUST00000040344.6	protein_coding	+
chr10_120911711_120914266	chr10	120911711	120914266	ENSMUSG00000025795.7	Rassf3	ENSMUST00000026902.7	protein_coding	-
chr10_121022877_121024836	chr10	121022877	121024836	ENSMUSG00000020115.2	Tbk1	ENSMUST00000020316.2	protein_coding	-
chr10_121062281_121064177	chr10	121062281	121064177	ENSMUSG00000034667.7	Xpot	ENSMUST00000039810.7	protein_coding	-
chr10_121076772_121079695	chr10	121076772	121079695	ENSMUSG00000047642.7	D930020B18Rik	ENSMUST00000142501.1	protein_coding	+
chr10_121076772_121079695	chr10	121076772	121079695	ENSMUSG00000047642.7	D930020B18Rik	ENSMUST00000140802.1	nonsense_mediated_decay	+
chr10_121076772_121079695	chr10	121076772	121079695	ENSMUSG00000047642.7	D930020B18Rik	ENSMUST00000169344.1	protein_coding	+
chr10_121076772_121079695	chr10	121076772	121079695	ENSMUSG00000047642.7	D930020B18Rik	ENSMUST00000120642.1	protein_coding	+
chr10_121076772_121079695	chr10	121076772	121079695	ENSMUSG00000047642.7	D930020B18Rik	ENSMUST00000132744.1	protein_coding	+
chr10_121176203_121177843	chr10	121176203	121177843	ENSMUSG00000053684.8	BC048403	ENSMUST00000065600.7	protein_coding	+
chr10_121176203_121177843	chr10	121176203	121177843	ENSMUSG00000053684.8	BC048403	ENSMUST00000136432.1	protein_coding	+
chr10_121483551_121485258	chr10	121483551	121485258	ENSMUSG00000020121.8	Srgap1	ENSMUST00000162710.1	retained_intron	-
chr10_121483551_121485258	chr10	121483551	121485258	ENSMUSG00000020121.8	Srgap1	ENSMUST00000081688.5	protein_coding	-
chr10_121483551_121485258	chr10	121483551	121485258	ENSMUSG00000020121.8	Srgap1	ENSMUST00000020322.5	protein_coding	-
chr10_121527445_121528264	chr10	121527445	121528264	ENSMUSG00000034620.10	Tmem5	ENSMUST00000129359.1	retained_intron	-
chr10_121533525_121535166	chr10	121533525	121535166	ENSMUSG00000034620.10	Tmem5	ENSMUST00000135083.1	processed_transcript	-
chr10_121533525_121535166	chr10	121533525	121535166	ENSMUSG00000034620.10	Tmem5	ENSMUST00000092131.4	protein_coding	-
chr10_121533525_121535166	chr10	121533525	121535166	ENSMUSG00000034620.10	Tmem5	ENSMUST00000038772.6	nonsense_mediated_decay	-
chr10_121533525_121535166	chr10	121533525	121535166	ENSMUSG00000034620.10	Tmem5	ENSMUST00000140299.1	protein_coding	-
chr10_121884179_121886953	chr10	121884179	121886953	ENSMUSG00000020123.5	Avpr1a	ENSMUST00000020323.5	protein_coding	+
chr10_122115168_122117967	chr10	122115168	122117967	ENSMUSG00000034613.6	Ppm1h	ENSMUST00000162853.1	retained_intron	+
chr10_122115168_122117967	chr10	122115168	122117967	ENSMUSG00000034613.6	Ppm1h	ENSMUST00000161487.1	protein_coding	+
chr10_122115168_122117967	chr10	122115168	122117967	ENSMUSG00000034613.6	Ppm1h	ENSMUST00000067918.5	protein_coding	+
chr10_122193983_122194456	chr10	122193983	122194456	ENSMUSG00000034613.6	Ppm1h	ENSMUST00000160315.1	processed_transcript	+
chr10_122331560_122332849	chr10	122331560	122332849	ENSMUSG00000034613.6	Ppm1h	ENSMUST00000162969.1	protein_coding	+
chr10_122422246_122424120	chr10	122422246	122424120	ENSMUSG00000065406.1	Mirlet7i	ENSMUST00000083472.1	miRNA	-
chr10_122512482_122514164	chr10	122512482	122514164	ENSMUSG00000034602.7	Mon2	ENSMUST00000073792.3	protein_coding	-
chr10_122512482_122514164	chr10	122512482	122514164	ENSMUSG00000034602.7	Mon2	ENSMUST00000170935.1	protein_coding	-
chr10_122512482_122514164	chr10	122512482	122514164	ENSMUSG00000034602.7	Mon2	ENSMUST00000037557.7	protein_coding	-
chr10_122633001_122635027	chr10	122633001	122635027	ENSMUSG00000020124.8	Usp15	ENSMUST00000105258.1	protein_coding	-
chr10_122633001_122635027	chr10	122633001	122635027	ENSMUSG00000020124.8	Usp15	ENSMUST00000020334.7	protein_coding	-
chr10_122633001_122635027	chr10	122633001	122635027	ENSMUSG00000020124.8	Usp15	ENSMUST00000105259.2	protein_coding	-
chr10_122700474_122701384	chr10	122700474	122701384	ENSMUSG00000044071.6	Fam19a2	ENSMUST00000050756.6	protein_coding	+
chr10_124745767_124746135	chr10	124745767	124746135	ENSMUSG00000020102.8	Slc16a7	ENSMUST00000105257.2	protein_coding	-
chr10_124765120_124766186	chr10	124765120	124766186	ENSMUSG00000020102.8	Slc16a7	ENSMUST00000063318.2	protein_coding	-
chr10_125402780_125404417	chr10	125402780	125404417	ENSMUSG00000020105.8	Lrig3	ENSMUST00000074807.6	protein_coding	+
chr10_126337836_126338955	chr10	126337836	126338955	ENSMUSG00000025436.5	Xrcc6bp1	ENSMUST00000168520.1	protein_coding	-
chr10_126337836_126338955	chr10	126337836	126338955	ENSMUSG00000025436.5	Xrcc6bp1	ENSMUST00000026504.5	protein_coding	-
chr10_126415104_126416138	chr10	126415104	126416138	ENSMUSG00000078429.2	Ctdsp2	ENSMUST00000105256.2	protein_coding	+
chr10_126436940_126438476	chr10	126436940	126438476	ENSMUSG00000025432.5	Avil	ENSMUST00000026500.5	protein_coding	+
chr10_126436940_126438476	chr10	126436940	126438476	ENSMUSG00000025432.5	Avil	ENSMUST00000142698.1	protein_coding	+
chr10_126462074_126462619	chr10	126462074	126462619	ENSMUSG00000040521.5	Tsfm	ENSMUST00000138556.1	retained_intron	-
chr10_126466961_126468427	chr10	126466961	126468427	ENSMUSG00000040521.5	Tsfm	ENSMUST00000134917.1	retained_intron	-
chr10_126466961_126468427	chr10	126466961	126468427	ENSMUSG00000040521.5	Tsfm	ENSMUST00000120547.1	protein_coding	-
chr10_126466961_126468427	chr10	126466961	126468427	ENSMUSG00000040521.5	Tsfm	ENSMUST00000145476.1	retained_intron	-
chr10_126466961_126468427	chr10	126466961	126468427	ENSMUSG00000040521.5	Tsfm	ENSMUST00000140564.1	processed_transcript	-
chr10_126466961_126468427	chr10	126466961	126468427	ENSMUSG00000040521.5	Tsfm	ENSMUST00000040560.4	protein_coding	-
chr10_126466961_126468427	chr10	126466961	126468427	ENSMUSG00000040521.5	Tsfm	ENSMUST00000152054.1	protein_coding	-
chr10_126477813_126479620	chr10	126477813	126479620	ENSMUSG00000006732.8	Mettl1	ENSMUST00000152960.1	protein_coding	+
chr10_126477813_126479620	chr10	126477813	126479620	ENSMUSG00000006732.8	Mettl1	ENSMUST00000006915.7	protein_coding	+
chr10_126477813_126479620	chr10	126477813	126479620	ENSMUSG00000006732.8	Mettl1	ENSMUST00000135655.1	retained_intron	+
chr10_126477813_126479620	chr10	126477813	126479620	ENSMUSG00000006732.8	Mettl1	ENSMUST00000120542.1	protein_coding	+
chr10_126477813_126479620	chr10	126477813	126479620	ENSMUSG00000006732.8	Mettl1	ENSMUST00000139486.1	nonsense_mediated_decay	+
chr10_126477813_126479620	chr10	126477813	126479620	ENSMUSG00000080115.2	Fam119b	ENSMUST00000116231.2	protein_coding	-
chr10_126485502_126487673	chr10	126485502	126487673	ENSMUSG00000006724.5	Cyp27b1	ENSMUST00000165764.1	protein_coding	+
chr10_126485502_126487673	chr10	126485502	126487673	ENSMUSG00000006724.5	Cyp27b1	ENSMUST00000172069.1	nonsense_mediated_decay	+
chr10_126485502_126487673	chr10	126485502	126487673	ENSMUSG00000006724.5	Cyp27b1	ENSMUST00000006907.4	protein_coding	+
chr10_126485502_126487673	chr10	126485502	126487673	ENSMUSG00000006724.5	Cyp27b1	ENSMUST00000171868.1	processed_transcript	+
chr10_126497283_126497893	chr10	126497283	126497893	ENSMUSG00000040502.5	March9	ENSMUST00000040307.5	protein_coding	-
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000006911.5	protein_coding	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000120226.1	protein_coding	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000133115.1	protein_coding	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000142558.1	nonsense_mediated_decay	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000140254.1	retained_intron	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000135179.1	retained_intron	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000125682.1	protein_coding	+
chr10_126500016_126501599	chr10	126500016	126501599	ENSMUSG00000006728.6	Cdk4	ENSMUST00000123456.1	retained_intron	+
chr10_126506104_126508648	chr10	126506104	126508648	ENSMUSG00000006736.8	Tspan31	ENSMUST00000060991.4	protein_coding	-
chr10_126515549_126516151	chr10	126515549	126516151	ENSMUSG00000025422.7	Agap2	ENSMUST00000039259.6	protein_coding	+
chr10_126515549_126516151	chr10	126515549	126516151	ENSMUSG00000025422.7	Agap2	ENSMUST00000105254.1	protein_coding	+
chr10_126557707_126558559	chr10	126557707	126558559	ENSMUSG00000040462.6	Os9	ENSMUST00000164259.1	protein_coding	-
chr10_126557707_126558559	chr10	126557707	126558559	ENSMUSG00000040462.6	Os9	ENSMUST00000080975.4	protein_coding	-
chr10_126575321_126576622	chr10	126575321	126576622	ENSMUSG00000088672.1	U6atac	ENSMUST00000158047.1	snRNA	-
chr10_126601656_126604238	chr10	126601656	126604238	ENSMUSG00000006731.8	B4galnt1	ENSMUST00000006914.8	protein_coding	+
chr10_126617006_126617565	chr10	126617006	126617565	ENSMUSG00000040441.7	Slc26a10	ENSMUST00000095270.2	protein_coding	-
chr10_126617006_126617565	chr10	126617006	126617565	ENSMUSG00000040441.7	Slc26a10	ENSMUST00000038612.7	protein_coding	-
chr10_126625555_126627469	chr10	126625555	126627469	ENSMUSG00000019467.7	Arhgef25	ENSMUST00000019611.7	protein_coding	-
chr10_126625555_126627469	chr10	126625555	126627469	ENSMUSG00000019467.7	Arhgef25	ENSMUST00000167353.1	protein_coding	-
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000040415.9	Dtx3	ENSMUST00000137151.1	protein_coding	-
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000086597.2	F420014N23Rik	ENSMUST00000129742.1	lincRNA	+
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000040415.9	Dtx3	ENSMUST00000125254.1	retained_intron	-
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000040415.9	Dtx3	ENSMUST00000144322.1	protein_coding	-
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000040415.9	Dtx3	ENSMUST00000116229.1	protein_coding	-
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000040415.9	Dtx3	ENSMUST00000038217.7	protein_coding	-
chr10_126631474_126634005	chr10	126631474	126634005	ENSMUSG00000040415.9	Dtx3	ENSMUST00000130855.1	protein_coding	-
chr10_126646036_126649209	chr10	126646036	126649209	ENSMUSG00000025417.7	Pip4k2c	ENSMUST00000013970.7	protein_coding	-
chr10_126699896_126700717	chr10	126699896	126700717	ENSMUSG00000074657.3	Kif5a	ENSMUST00000169813.1	protein_coding	-
chr10_126699896_126700717	chr10	126699896	126700717	ENSMUSG00000074657.3	Kif5a	ENSMUST00000099172.2	protein_coding	-
chr10_126702768_126704271	chr10	126702768	126704271	ENSMUSG00000025410.8	Dctn2	ENSMUST00000026479.8	protein_coding	+
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000092593.1	RP24-341K21.5	ENSMUST00000172591.1	processed_transcript	+
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000025408.9	Ddit3	ENSMUST00000026475.8	protein_coding	+
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000025408.9	Ddit3	ENSMUST00000139091.1	protein_coding	+
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000025408.9	Ddit3	ENSMUST00000134686.1	retained_intron	+
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000092384.1	RP24-341K21.6	ENSMUST00000174141.1	retained_intron	-
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000092384.1	RP24-341K21.6	ENSMUST00000174167.1	processed_transcript	-
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000025409.8	Mbd6	ENSMUST00000156208.1	protein_coding	-
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000025409.8	Mbd6	ENSMUST00000026476.6	protein_coding	-
chr10_126725403_126728572	chr10	126725403	126728572	ENSMUSG00000025409.8	Mbd6	ENSMUST00000119078.1	protein_coding	-
chr10_126734275_126734719	chr10	126734275	126734719	ENSMUSG00000040354.8	Mars	ENSMUST00000139683.1	retained_intron	-
chr10_126734275_126734719	chr10	126734275	126734719	ENSMUSG00000040354.8	Mars	ENSMUST00000134778.2	protein_coding	-
chr10_126734787_126735407	chr10	126734787	126735407	ENSMUSG00000040354.8	Mars	ENSMUST00000139683.1	retained_intron	-
chr10_126734787_126735407	chr10	126734787	126735407	ENSMUSG00000040354.8	Mars	ENSMUST00000134778.2	protein_coding	-
chr10_126748068_126750338	chr10	126748068	126750338	ENSMUSG00000040354.8	Mars	ENSMUST00000145275.1	retained_intron	-
chr10_126748068_126750338	chr10	126748068	126750338	ENSMUSG00000040354.8	Mars	ENSMUST00000171564.1	protein_coding	-
chr10_126748068_126750338	chr10	126748068	126750338	ENSMUSG00000040354.8	Mars	ENSMUST00000037290.5	protein_coding	-
chr10_126758501_126759666	chr10	126758501	126759666	ENSMUSG00000040345.8	Arhgap9	ENSMUST00000069535.3	protein_coding	+
chr10_126760393_126761103	chr10	126760393	126761103	ENSMUSG00000040345.8	Arhgap9	ENSMUST00000069548.5	protein_coding	+
chr10_126778009_126778459	chr10	126778009	126778459	ENSMUSG00000025407.5	Gli1	ENSMUST00000105252.2	protein_coding	-
chr10_126778009_126778459	chr10	126778009	126778459	ENSMUSG00000025407.5	Gli1	ENSMUST00000026474.3	protein_coding	-
chr10_126788785_126789664	chr10	126788785	126789664	ENSMUSG00000047492.4	Inhbe	ENSMUST00000059718.4	protein_coding	-
chr10_126806136_126808082	chr10	126806136	126808082	ENSMUSG00000025405.8	Inhbc	ENSMUST00000026472.8	protein_coding	-
chr10_126816986_126818575	chr10	126816986	126818575	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000170164.1	protein_coding	+
chr10_126816986_126818575	chr10	126816986	126818575	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000166820.1	protein_coding	+
chr10_126816986_126818575	chr10	126816986	126818575	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000111628.2	protein_coding	+
chr10_126857289_126858965	chr10	126857289	126858965	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000171434.1	protein_coding	+
chr10_126857289_126858965	chr10	126857289	126858965	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000064793.6	protein_coding	+
chr10_126857289_126858965	chr10	126857289	126858965	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000170336.1	protein_coding	+
chr10_126857289_126858965	chr10	126857289	126858965	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000168780.1	protein_coding	+
chr10_126918153_126919140	chr10	126918153	126919140	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000164469.1	retained_intron	+
chr10_126927249_126929684	chr10	126927249	126929684	ENSMUSG00000025404.8	R3hdm2	ENSMUST00000171426.1	protein_coding	+
chr10_126951848_126952057	chr10	126951848	126952057	ENSMUSG00000040280.9	Ndufa4l2	ENSMUST00000035735.9	protein_coding	+
chr10_126957589_126959748	chr10	126957589	126959748	ENSMUSG00000025403.3	Shmt2	ENSMUST00000026470.3	protein_coding	-
chr10_126970309_126971737	chr10	126970309	126971737	ENSMUSG00000040258.5	Nxph4	ENSMUST00000095266.2	protein_coding	-
chr10_126970309_126971737	chr10	126970309	126971737	ENSMUSG00000040258.5	Nxph4	ENSMUST00000059904.5	protein_coding	-
chr10_127032098_127034845	chr10	127032098	127034845	ENSMUSG00000086499.1	Gm16217	ENSMUST00000124182.1	antisense	+
chr10_127057888_127059667	chr10	127057888	127059667	ENSMUSG00000040249.9	Lrp1	ENSMUST00000118455.1	protein_coding	-
chr10_127057888_127059667	chr10	127057888	127059667	ENSMUSG00000040249.9	Lrp1	ENSMUST00000121829.1	protein_coding	-
chr10_127057888_127059667	chr10	127057888	127059667	ENSMUSG00000040249.9	Lrp1	ENSMUST00000125480.1	retained_intron	-
chr10_127057888_127059667	chr10	127057888	127059667	ENSMUSG00000040249.9	Lrp1	ENSMUST00000049149.8	protein_coding	-
chr10_127078654_127081432	chr10	127078654	127081432	ENSMUSG00000002147.11	Stat6	ENSMUST00000092074.5	protein_coding	+
chr10_127078654_127081432	chr10	127078654	127081432	ENSMUSG00000002147.11	Stat6	ENSMUST00000120279.1	protein_coding	+
chr10_127090244_127090803	chr10	127090244	127090803	ENSMUSG00000002147.11	Stat6	ENSMUST00000128072.1	retained_intron	+
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000040195.5	Tmem194	ENSMUST00000133505.1	processed_transcript	+
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000040195.5	Tmem194	ENSMUST00000124388.1	processed_transcript	+
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000040195.5	Tmem194	ENSMUST00000118728.1	protein_coding	+
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000040195.5	Tmem194	ENSMUST00000142580.1	processed_transcript	+
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000025402.5	Nab2	ENSMUST00000129252.1	protein_coding	-
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000025402.5	Nab2	ENSMUST00000099156.3	protein_coding	-
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000025402.5	Nab2	ENSMUST00000099157.3	protein_coding	-
chr10_127102991_127106622	chr10	127102991	127106622	ENSMUSG00000025402.5	Nab2	ENSMUST00000026469.2	protein_coding	-
chr10_127113307_127115368	chr10	127113307	127115368	ENSMUSG00000040195.5	Tmem194	ENSMUST00000118612.1	protein_coding	+
chr10_127113307_127115368	chr10	127113307	127115368	ENSMUSG00000040195.5	Tmem194	ENSMUST00000048099.4	protein_coding	+
chr10_127113307_127115368	chr10	127113307	127115368	ENSMUSG00000087163.1	Gm16230	ENSMUST00000155550.1	antisense	-
chr10_127175138_127177421	chr10	127175138	127177421	ENSMUSG00000044617.7	Zbtb39	ENSMUST00000054287.7	protein_coding	+
chr10_127188713_127188922	chr10	127188713	127188922	ENSMUSG00000058396.6	Gpr182	ENSMUST00000171242.1	protein_coding	-
chr10_127188713_127188922	chr10	127188713	127188922	ENSMUSG00000058396.6	Gpr182	ENSMUST00000079692.5	protein_coding	-
chr10_127196117_127196747	chr10	127196117	127196747	ENSMUSG00000089789.1	Rdh1	ENSMUST00000073639.5	protein_coding	+
chr10_127196117_127196747	chr10	127196117	127196747	ENSMUSG00000056148.7	Rdh9	ENSMUST00000128247.1	protein_coding	+
chr10_127212391_127214005	chr10	127212391	127214005	ENSMUSG00000056148.7	Rdh9	ENSMUST00000128133.1	processed_transcript	+
chr10_127212391_127214005	chr10	127212391	127214005	ENSMUSG00000056148.7	Rdh9	ENSMUST00000136223.1	protein_coding	+
chr10_127212391_127214005	chr10	127212391	127214005	ENSMUSG00000056148.7	Rdh9	ENSMUST00000052652.6	protein_coding	+
chr10_127237669_127239039	chr10	127237669	127239039	ENSMUSG00000069456.4	Rdh16	ENSMUST00000155739.1	nonsense_mediated_decay	+
chr10_127237669_127239039	chr10	127237669	127239039	ENSMUSG00000069456.4	Rdh16	ENSMUST00000125163.1	nonsense_mediated_decay	+
chr10_127237669_127239039	chr10	127237669	127239039	ENSMUSG00000069456.4	Rdh16	ENSMUST00000071646.1	protein_coding	+
chr10_127260755_127261449	chr10	127260755	127261449	ENSMUSG00000054031.7	Rdh18-ps	ENSMUST00000137395.1	transcribed_unprocessed_pseudogene	+
chr10_127260755_127261449	chr10	127260755	127261449	ENSMUSG00000054031.7	Rdh18-ps	ENSMUST00000143917.1	processed_transcript	+
chr10_127303077_127304478	chr10	127303077	127304478	ENSMUSG00000074639.5	BC089597	ENSMUST00000092058.3	protein_coding	+
chr10_127303077_127304478	chr10	127303077	127304478	ENSMUSG00000074639.5	BC089597	ENSMUST00000026464.7	protein_coding	+
chr10_127325499_127326195	chr10	127325499	127326195	ENSMUSG00000040134.7	Rdh7	ENSMUST00000130374.1	processed_transcript	-
chr10_127325499_127326195	chr10	127325499	127326195	ENSMUSG00000040134.7	Rdh7	ENSMUST00000047199.4	protein_coding	-
chr10_127325499_127326195	chr10	127325499	127326195	ENSMUSG00000040134.7	Rdh7	ENSMUST00000095258.4	protein_coding	-
chr10_127338669_127339521	chr10	127338669	127339521	ENSMUSG00000040127.7	Sdr9c7	ENSMUST00000155067.1	processed_transcript	+
chr10_127340182_127340548	chr10	127340182	127340548	ENSMUSG00000040127.7	Sdr9c7	ENSMUST00000149849.1	processed_transcript	+
chr10_127451863_127452871	chr10	127451863	127452871	ENSMUSG00000025395.7	Prim1	ENSMUST00000026461.7	protein_coding	+
chr10_127451863_127452871	chr10	127451863	127452871	ENSMUSG00000025395.7	Prim1	ENSMUST00000133285.1	retained_intron	+
chr10_127471803_127474407	chr10	127471803	127474407	ENSMUSG00000061315.7	Naca	ENSMUST00000092048.5	protein_coding	+
chr10_127471803_127474407	chr10	127471803	127474407	ENSMUSG00000061315.7	Naca	ENSMUST00000073868.7	protein_coding	+
chr10_127495188_127497153	chr10	127495188	127497153	ENSMUSG00000071072.5	Ptges3	ENSMUST00000052798.7	protein_coding	+
chr10_127495188_127497153	chr10	127495188	127497153	ENSMUSG00000071072.5	Ptges3	ENSMUST00000171524.1	protein_coding	+
chr10_127495188_127497153	chr10	127495188	127497153	ENSMUSG00000040054.8	Baz2a	ENSMUST00000170054.1	protein_coding	+
chr10_127495188_127497153	chr10	127495188	127497153	ENSMUSG00000040054.8	Baz2a	ENSMUST00000045621.7	protein_coding	+
chr10_127495188_127497153	chr10	127495188	127497153	ENSMUSG00000071072.5	Ptges3	ENSMUST00000084771.2	protein_coding	+
chr10_127506051_127506748	chr10	127506051	127506748	ENSMUSG00000071072.5	Ptges3	ENSMUST00000148943.1	retained_intron	+
chr10_127519218_127521251	chr10	127519218	127521251	ENSMUSG00000025393.5	Atp5b	ENSMUST00000026459.5	protein_coding	+
chr10_127519218_127521251	chr10	127519218	127521251	ENSMUSG00000025393.5	Atp5b	ENSMUST00000127439.1	processed_transcript	+
chr10_127519218_127521251	chr10	127519218	127521251	ENSMUSG00000064778.1	SNORD59	ENSMUST00000082844.1	snoRNA	+
chr10_127525275_127525608	chr10	127525275	127525608	ENSMUSG00000025393.5	Atp5b	ENSMUST00000123803.1	retained_intron	+
chr10_127525275_127525608	chr10	127525275	127525608	ENSMUSG00000025393.5	Atp5b	ENSMUST00000126751.1	processed_transcript	+
chr10_127527747_127530682	chr10	127527747	127530682	ENSMUSG00000040054.8	Baz2a	ENSMUST00000168534.1	protein_coding	+
chr10_127612403_127614043	chr10	127612403	127614043	ENSMUSG00000040043.8	Rbms2	ENSMUST00000076233.5	protein_coding	-
chr10_127612403_127614043	chr10	127612403	127614043	ENSMUSG00000040043.8	Rbms2	ENSMUST00000092033.2	protein_coding	-
chr10_127617164_127617491	chr10	127617164	127617491	ENSMUSG00000040043.8	Rbms2	ENSMUST00000099139.1	protein_coding	-
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000044776.6	protein_coding	+
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000123291.1	protein_coding	+
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000143827.1	nonsense_mediated_decay	+
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000123385.1	nonsense_mediated_decay	+
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000159440.1	nonsense_mediated_decay	+
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000134104.1	nonsense_mediated_decay	+
chr10_127631001_127632828	chr10	127631001	127632828	ENSMUSG00000044005.7	Gls2	ENSMUST00000152928.1	retained_intron	+
chr10_127640581_127640803	chr10	127640581	127640803	ENSMUSG00000044005.7	Gls2	ENSMUST00000145591.1	processed_transcript	+
chr10_127640581_127640803	chr10	127640581	127640803	ENSMUSG00000044005.7	Gls2	ENSMUST00000135441.1	retained_intron	+
chr10_127640858_127641202	chr10	127640858	127641202	ENSMUSG00000044005.7	Gls2	ENSMUST00000145591.1	processed_transcript	+
chr10_127640858_127641202	chr10	127640858	127641202	ENSMUSG00000044005.7	Gls2	ENSMUST00000135441.1	retained_intron	+
chr10_127647917_127649481	chr10	127647917	127649481	ENSMUSG00000051346.8	Spryd4	ENSMUST00000061995.8	protein_coding	-
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000105246.2	protein_coding	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000055539.4	protein_coding	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000145710.1	retained_intron	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000105244.1	protein_coding	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000105243.2	protein_coding	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000125289.1	nonsense_mediated_decay	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000039994.8	Timeless	ENSMUST00000105242.1	protein_coding	+
chr10_127668333_127670246	chr10	127668333	127670246	ENSMUSG00000091500.1	Gm17292	ENSMUST00000165347.1	lincRNA	-
chr10_127674799_127675653	chr10	127674799	127675653	ENSMUSG00000039994.8	Timeless	ENSMUST00000105245.2	protein_coding	+
chr10_127684005_127684682	chr10	127684005	127684682	ENSMUSG00000039994.8	Timeless	ENSMUST00000142484.1	retained_intron	+
chr10_127684005_127684682	chr10	127684005	127684682	ENSMUSG00000039994.8	Timeless	ENSMUST00000105240.1	processed_transcript	+
chr10_127690413_127692402	chr10	127690413	127692402	ENSMUSG00000051716.5	Apon	ENSMUST00000060782.3	protein_coding	+
chr10_127705066_127705284	chr10	127705066	127705284	ENSMUSG00000047631.2	Apof	ENSMUST00000050901.2	protein_coding	+
chr10_127705355_127708265	chr10	127705355	127708265	ENSMUSG00000040033.8	Stat2	ENSMUST00000164569.1	protein_coding	+
chr10_127705355_127708265	chr10	127705355	127708265	ENSMUSG00000040033.8	Stat2	ENSMUST00000085708.2	protein_coding	+
chr10_127705355_127708265	chr10	127705355	127708265	ENSMUSG00000040033.8	Stat2	ENSMUST00000105238.2	protein_coding	+
chr10_127705355_127708265	chr10	127705355	127708265	ENSMUSG00000040033.8	Stat2	ENSMUST00000172030.1	protein_coding	+
chr10_127734278_127735086	chr10	127734278	127735086	ENSMUSG00000025383.1	Il23a	ENSMUST00000026449.1	protein_coding	-
chr10_127739439_127741593	chr10	127739439	127741593	ENSMUSG00000005682.7	Pan2	ENSMUST00000005825.5	protein_coding	+
chr10_127739439_127741593	chr10	127739439	127741593	ENSMUSG00000005682.7	Pan2	ENSMUST00000105236.1	protein_coding	+
chr10_127758782_127760620	chr10	127758782	127760620	ENSMUSG00000025381.2	Cnpy2	ENSMUST00000026446.2	protein_coding	+
chr10_127774259_127775848	chr10	127774259	127775848	ENSMUSG00000005683.7	Cs	ENSMUST00000005826.7	protein_coding	+
chr10_127813332_127815300	chr10	127813332	127815300	ENSMUSG00000014498.3	Ankrd52	ENSMUST00000167990.1	retained_intron	+
chr10_127813332_127815300	chr10	127813332	127815300	ENSMUSG00000014498.3	Ankrd52	ENSMUST00000014642.3	protein_coding	+
chr10_127813332_127815300	chr10	127813332	127815300	ENSMUSG00000088393.1	AC090489.1	ENSMUST00000157768.1	miRNA	-
chr10_127825996_127827097	chr10	127825996	127827097	ENSMUSG00000014498.3	Ankrd52	ENSMUST00000166577.1	protein_coding	+
chr10_127832771_127834904	chr10	127832771	127834904	ENSMUSG00000090761.1	Gm17201	ENSMUST00000167226.1	antisense	-
chr10_127837169_127837876	chr10	127837169	127837876	ENSMUSG00000039878.6	Slc39a5	ENSMUST00000167859.1	protein_coding	-
chr10_127837967_127838501	chr10	127837967	127838501	ENSMUSG00000039878.6	Slc39a5	ENSMUST00000042666.5	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025373.7	Rnf41	ENSMUST00000096386.5	protein_coding	+
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025373.7	Rnf41	ENSMUST00000171342.1	protein_coding	+
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000171370.1	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000171494.1	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000172238.1	nonsense_mediated_decay	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000164664.1	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000172348.1	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000167456.1	retained_intron	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000166608.1	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000164199.1	protein_coding	-
chr10_127846011_127849345	chr10	127846011	127849345	ENSMUSG00000025374.7	Obfc2b	ENSMUST00000026439.7	protein_coding	-
chr10_127871513_127873273	chr10	127871513	127873273	ENSMUSG00000088151.1	SCARNA11	ENSMUST00000157526.1	snoRNA	+
chr10_127895327_127897395	chr10	127895327	127897395	ENSMUSG00000025369.8	Smarcc2	ENSMUST00000105235.2	protein_coding	+
chr10_127895327_127897395	chr10	127895327	127897395	ENSMUSG00000025369.8	Smarcc2	ENSMUST00000099131.3	protein_coding	+
chr10_127895327_127897395	chr10	127895327	127897395	ENSMUSG00000025369.8	Smarcc2	ENSMUST00000026433.7	protein_coding	+
chr10_127929755_127931820	chr10	127929755	127931820	ENSMUSG00000090841.1	Myl6	ENSMUST00000164181.1	protein_coding	-
chr10_127935577_127936817	chr10	127935577	127936817	ENSMUSG00000085446.2	A430046D13Rik	ENSMUST00000151955.1	lincRNA	+
chr10_127935577_127936817	chr10	127935577	127936817	ENSMUSG00000039824.3	Myl6b	ENSMUST00000026428.3	protein_coding	-
chr10_127961315_127963976	chr10	127961315	127963976	ENSMUSG00000025366.6	Esyt1	ENSMUST00000105234.1	protein_coding	-
chr10_127961315_127963976	chr10	127961315	127963976	ENSMUSG00000025366.6	Esyt1	ENSMUST00000026427.6	protein_coding	-
chr10_128024618_128027939	chr10	128024618	128027939	ENSMUSG00000018166.8	Erbb3	ENSMUST00000082059.6	protein_coding	-
chr10_128052052_128052316	chr10	128052052	128052316	ENSMUSG00000091240.1	Gm9182	ENSMUST00000165112.1	protein_coding	+
chr10_128062959_128064513	chr10	128062959	128064513	ENSMUSG00000025362.5	Rps26	ENSMUST00000026420.5	protein_coding	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000091431.1	Gm17336	ENSMUST00000164196.1	lincRNA	+
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000149762.1	processed_transcript	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000153650.1	nonsense_mediated_decay	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000139442.1	nonsense_mediated_decay	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000156052.1	nonsense_mediated_decay	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000119614.1	protein_coding	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000105233.2	nonsense_mediated_decay	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000065334.3	protein_coding	-
chr10_128081617_128084246	chr10	128081617	128084246	ENSMUSG00000002578.8	Ikzf4	ENSMUST00000133342.1	protein_coding	-
chr10_128110082_128112022	chr10	128110082	128112022	ENSMUSG00000049858.7	Suox	ENSMUST00000054764.7	protein_coding	-
chr10_128132616_128134134	chr10	128132616	128134134	ENSMUSG00000000711.2	Rab5b	ENSMUST00000000727.2	protein_coding	-
chr10_128141229_128142996	chr10	128141229	128142996	ENSMUSG00000025358.9	Cdk2	ENSMUST00000026416.7	protein_coding	-
chr10_128141229_128142996	chr10	128141229	128142996	ENSMUSG00000025358.9	Cdk2	ENSMUST00000026415.7	protein_coding	-
chr10_128180219_128182854	chr10	128180219	128182854	ENSMUSG00000025357.7	Dgka	ENSMUST00000026414.7	protein_coding	-
chr10_128184476_128186060	chr10	128184476	128186060	ENSMUSG00000064030.7	Wibg	ENSMUST00000163377.1	protein_coding	+
chr10_128184476_128186060	chr10	128184476	128186060	ENSMUSG00000064030.7	Wibg	ENSMUST00000065210.7	protein_coding	+
chr10_128227411_128228318	chr10	128227411	128228318	ENSMUSG00000025355.6	Mmp19	ENSMUST00000026411.6	protein_coding	+
chr10_128240746_128242942	chr10	128240746	128242942	ENSMUSG00000025354.3	Dnajc14	ENSMUST00000105231.2	protein_coding	+
chr10_128240746_128242942	chr10	128240746	128242942	ENSMUSG00000025354.3	Dnajc14	ENSMUST00000026410.1	protein_coding	+
chr10_128240746_128242942	chr10	128240746	128242942	ENSMUSG00000047090.7	1110012D08Rik	ENSMUST00000139227.1	nonsense_mediated_decay	-
chr10_128240746_128242942	chr10	128240746	128242942	ENSMUSG00000047090.7	1110012D08Rik	ENSMUST00000152966.1	nonsense_mediated_decay	-
chr10_128240746_128242942	chr10	128240746	128242942	ENSMUSG00000047090.7	1110012D08Rik	ENSMUST00000051011.7	protein_coding	-
chr10_128258125_128259512	chr10	128258125	128259512	ENSMUSG00000078427.2	Sarnp	ENSMUST00000105230.2	protein_coding	+
chr10_128258125_128259512	chr10	128258125	128259512	ENSMUSG00000025353.3	Ormdl2	ENSMUST00000116228.1	protein_coding	-
chr10_128258125_128259512	chr10	128258125	128259512	ENSMUSG00000025353.3	Ormdl2	ENSMUST00000026409.3	protein_coding	-
chr10_128327605_128329894	chr10	128327605	128329894	ENSMUSG00000025352.6	Gdf11	ENSMUST00000026408.6	protein_coding	-
chr10_128345854_128347370	chr10	128345854	128347370	ENSMUSG00000025351.7	Cd63	ENSMUST00000105229.1	protein_coding	+
chr10_128345854_128347370	chr10	128345854	128347370	ENSMUSG00000025351.7	Cd63	ENSMUST00000026407.7	protein_coding	+
chr10_128355039_128355705	chr10	128355039	128355705	ENSMUSG00000025350.9	Rdh5	ENSMUST00000145616.1	protein_coding	-
chr10_128355039_128355705	chr10	128355039	128355705	ENSMUSG00000025350.9	Rdh5	ENSMUST00000137747.1	protein_coding	-
chr10_128356079_128356801	chr10	128356079	128356801	ENSMUSG00000025350.9	Rdh5	ENSMUST00000153935.1	retained_intron	-
chr10_128356079_128356801	chr10	128356079	128356801	ENSMUSG00000025350.9	Rdh5	ENSMUST00000149961.1	protein_coding	-
chr10_128356079_128356801	chr10	128356079	128356801	ENSMUSG00000025350.9	Rdh5	ENSMUST00000026406.7	protein_coding	-
chr10_128359229_128361178	chr10	128359229	128361178	ENSMUSG00000090247.1	Bloc1s1	ENSMUST00000143628.1	retained_intron	-
chr10_128359229_128361178	chr10	128359229	128361178	ENSMUSG00000090247.1	Bloc1s1	ENSMUST00000141320.1	processed_transcript	-
chr10_128359229_128361178	chr10	128359229	128361178	ENSMUSG00000090247.1	Bloc1s1	ENSMUST00000131271.1	protein_coding	-
chr10_128359229_128361178	chr10	128359229	128361178	ENSMUSG00000090247.1	Bloc1s1	ENSMUST00000026405.3	protein_coding	-
chr10_128359229_128361178	chr10	128359229	128361178	ENSMUSG00000025350.9	Rdh5	ENSMUST00000135161.1	protein_coding	-
chr10_128359229_128361178	chr10	128359229	128361178	ENSMUSG00000090247.1	Bloc1s1	ENSMUST00000153731.1	protein_coding	-
chr10_128370611_128371805	chr10	128370611	128371805	ENSMUSG00000025348.7	Itga7	ENSMUST00000073153.5	protein_coding	+
chr10_128370611_128371805	chr10	128370611	128371805	ENSMUSG00000025348.7	Itga7	ENSMUST00000099112.2	protein_coding	+
chr10_128370611_128371805	chr10	128370611	128371805	ENSMUSG00000025348.7	Itga7	ENSMUST00000105228.1	protein_coding	+
chr10_128370611_128371805	chr10	128370611	128371805	ENSMUSG00000025348.7	Itga7	ENSMUST00000074708.5	protein_coding	+
chr10_128370611_128371805	chr10	128370611	128371805	ENSMUSG00000025348.7	Itga7	ENSMUST00000076079.5	protein_coding	+
chr10_128397269_128398647	chr10	128397269	128398647	ENSMUSG00000025347.3	Mettl7b	ENSMUST00000026398.3	protein_coding	-
chr10_128548764_128550030	chr10	128548764	128550030	ENSMUSG00000042801.4	Olfr769	ENSMUST00000050915.4	protein_coding	-
chr10_129044128_129045530	chr10	129044128	129045530	ENSMUSG00000052012.3	Olfr796	ENSMUST00000037071.4	protein_coding	-
chr10_129133170_129134823	chr10	129133170	129134823	ENSMUSG00000088147.1	SNORA17	ENSMUST00000157522.1	snoRNA	+
chr10_129716840_129717646	chr10	129716840	129717646	ENSMUSG00000048015.3	Neurod4	ENSMUST00000061571.3	protein_coding	-
chr10_129759262_129760435	chr10	129759262	129760435	ENSMUSG00000034833.8	5830405N20Rik	ENSMUST00000099102.3	protein_coding	+
chr10_129759262_129760435	chr10	129759262	129760435	ENSMUSG00000034833.8	5830405N20Rik	ENSMUST00000042586.8	protein_coding	+
chr10_129849654_129850139	chr10	129849654	129850139	ENSMUSG00000040540.5	Gm9770	ENSMUST00000075147.4	pseudogene	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000020734.4	protein_coding	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000125224.1	retained_intron	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000110049.1	protein_coding	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000131693.1	retained_intron	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000125637.1	protein_coding	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000110048.1	protein_coding	+
chr11_3101805_3103534	chr11	3101805	3103534	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000120721.2	protein_coding	+
chr11_3135008_3135530	chr11	3135008	3135530	ENSMUSG00000020454.10	Eif4enif1	ENSMUST00000147534.1	retained_intron	+
chr11_3165681_3167432	chr11	3165681	3167432	ENSMUSG00000020457.7	Drg1	ENSMUST00000132159.1	nonsense_mediated_decay	-
chr11_3165681_3167432	chr11	3165681	3167432	ENSMUSG00000020457.7	Drg1	ENSMUST00000125424.1	retained_intron	-
chr11_3165681_3167432	chr11	3165681	3167432	ENSMUSG00000020457.7	Drg1	ENSMUST00000166162.1	processed_transcript	-
chr11_3165681_3167432	chr11	3165681	3167432	ENSMUSG00000020457.7	Drg1	ENSMUST00000020741.5	protein_coding	-
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000142561.1	processed_transcript	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000101644.3	processed_transcript	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000144396.1	ambiguous_orf	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000134089.1	ambiguous_orf	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000094471.3	protein_coding	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000110043.1	protein_coding	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000057089.6	protein_coding	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000110045.2	protein_coding	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000093402.5	protein_coding	+
chr11_3187977_3191918	chr11	3187977	3191918	ENSMUSG00000020453.10	Patz1	ENSMUST00000123983.1	processed_transcript	+
chr11_3192076_3192465	chr11	3192076	3192465	ENSMUSG00000020453.10	Patz1	ENSMUST00000153603.1	processed_transcript	+
chr11_3192666_3192906	chr11	3192666	3192906	ENSMUSG00000020453.10	Patz1	ENSMUST00000136285.1	processed_transcript	+
chr11_3197628_3199514	chr11	3197628	3199514	ENSMUSG00000020453.10	Patz1	ENSMUST00000154319.1	protein_coding	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000045153.4	protein_coding	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000149253.1	retained_intron	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000136536.1	protein_coding	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000153733.1	retained_intron	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000093399.4	protein_coding	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000142961.1	retained_intron	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000138907.1	protein_coding	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000136474.1	protein_coding	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000034614.8	Pik3ip1	ENSMUST00000139139.1	processed_transcript	+
chr11_3229548_3232801	chr11	3229548	3232801	ENSMUSG00000053263.3	Gm12592	ENSMUST00000155332.1	processed_transcript	-
chr11_3252534_3253557	chr11	3252534	3253557	ENSMUSG00000020451.11	Limk2	ENSMUST00000148771.1	processed_transcript	-
chr11_3270492_3272203	chr11	3270492	3272203	ENSMUSG00000020451.11	Limk2	ENSMUST00000147344.1	processed_transcript	-
chr11_3270492_3272203	chr11	3270492	3272203	ENSMUSG00000020451.11	Limk2	ENSMUST00000101640.3	protein_coding	-
chr11_3270492_3272203	chr11	3270492	3272203	ENSMUSG00000020451.11	Limk2	ENSMUST00000101642.3	protein_coding	-
chr11_3270492_3272203	chr11	3270492	3272203	ENSMUSG00000020451.11	Limk2	ENSMUST00000134576.1	processed_transcript	-
chr11_3308281_3309780	chr11	3308281	3309780	ENSMUSG00000020451.11	Limk2	ENSMUST00000145223.1	processed_transcript	-
chr11_3308281_3309780	chr11	3308281	3309780	ENSMUSG00000020451.11	Limk2	ENSMUST00000125832.1	processed_transcript	-
chr11_3308281_3309780	chr11	3308281	3309780	ENSMUSG00000020451.11	Limk2	ENSMUST00000101638.3	protein_coding	-
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000034587.8	8430429K09Rik	ENSMUST00000136038.1	processed_transcript	+
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000034587.8	8430429K09Rik	ENSMUST00000144844.1	processed_transcript	+
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000034587.8	8430429K09Rik	ENSMUST00000142397.1	processed_transcript	+
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000034587.8	8430429K09Rik	ENSMUST00000146456.1	processed_transcript	+
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000034587.8	8430429K09Rik	ENSMUST00000154397.1	processed_transcript	+
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000020448.9	Rnf185	ENSMUST00000144055.1	processed_transcript	-
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000020448.9	Rnf185	ENSMUST00000077078.5	protein_coding	-
chr11_3351511_3353085	chr11	3351511	3353085	ENSMUSG00000020448.9	Rnf185	ENSMUST00000064364.2	protein_coding	-
chr11_3371222_3371938	chr11	3371222	3371938	ENSMUSG00000081059.1	Gm11945	ENSMUST00000120551.1	transcribed_processed_pseudogene	-
chr11_3374432_3375179	chr11	3374432	3375179	ENSMUSG00000088519.1	U8	ENSMUST00000157894.1	snoRNA	-
chr11_3387820_3388295	chr11	3387820	3388295	ENSMUSG00000034579.10	Pla2g3	ENSMUST00000064236.5	protein_coding	+
chr11_3387820_3388295	chr11	3387820	3388295	ENSMUSG00000034579.10	Pla2g3	ENSMUST00000064265.6	protein_coding	+
chr11_3387820_3388295	chr11	3387820	3388295	ENSMUSG00000034579.10	Pla2g3	ENSMUST00000044682.6	nonsense_mediated_decay	+
chr11_3388345_3388737	chr11	3388345	3388737	ENSMUSG00000034579.10	Pla2g3	ENSMUST00000064236.5	protein_coding	+
chr11_3388345_3388737	chr11	3388345	3388737	ENSMUSG00000034579.10	Pla2g3	ENSMUST00000064265.6	protein_coding	+
chr11_3388345_3388737	chr11	3388345	3388737	ENSMUSG00000034579.10	Pla2g3	ENSMUST00000044682.6	nonsense_mediated_decay	+
chr11_3402059_3402468	chr11	3402059	3402468	ENSMUSG00000034570.5	Inpp5j	ENSMUST00000148939.1	processed_transcript	-
chr11_3403818_3405343	chr11	3403818	3405343	ENSMUSG00000034570.5	Inpp5j	ENSMUST00000110019.1	protein_coding	-
chr11_3403818_3405343	chr11	3403818	3405343	ENSMUSG00000034570.5	Inpp5j	ENSMUST00000110018.1	protein_coding	-
chr11_3403818_3405343	chr11	3403818	3405343	ENSMUSG00000034570.5	Inpp5j	ENSMUST00000154756.1	processed_transcript	-
chr11_3403818_3405343	chr11	3403818	3405343	ENSMUSG00000034570.5	Inpp5j	ENSMUST00000044507.5	protein_coding	-
chr11_3414302_3416181	chr11	3414302	3416181	ENSMUSG00000075702.9	Selm	ENSMUST00000123677.1	processed_transcript	+
chr11_3414302_3416181	chr11	3414302	3416181	ENSMUSG00000075702.9	Selm	ENSMUST00000131865.1	processed_transcript	+
chr11_3414302_3416181	chr11	3414302	3416181	ENSMUSG00000075702.9	Selm	ENSMUST00000094469.4	protein_coding	+
chr11_3426050_3428223	chr11	3426050	3428223	ENSMUSG00000020439.10	Smtn	ENSMUST00000020718.4	protein_coding	-
chr11_3426050_3428223	chr11	3426050	3428223	ENSMUSG00000020439.10	Smtn	ENSMUST00000110008.2	protein_coding	-
chr11_3429827_3430384	chr11	3429827	3430384	ENSMUSG00000087291.1	Gm11946	ENSMUST00000128806.1	processed_transcript	+
chr11_3436823_3437518	chr11	3436823	3437518	ENSMUSG00000020439.10	Smtn	ENSMUST00000110011.1	protein_coding	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000151804.1	processed_transcript	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000136243.1	protein_coding	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000020721.8	protein_coding	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000075118.3	protein_coding	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000154861.1	processed_transcript	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000167065.1	protein_coding	-
chr11_3438898_3439825	chr11	3438898	3439825	ENSMUSG00000020439.10	Smtn	ENSMUST00000170588.1	protein_coding	-
chr11_3528925_3529563	chr11	3528925	3529563	ENSMUSG00000084310.1	Gm11950	ENSMUST00000121615.1	transcribed_processed_pseudogene	+
chr11_3548292_3550160	chr11	3548292	3550160	ENSMUSG00000034543.8	Morc2a	ENSMUST00000093389.2	protein_coding	+
chr11_3548292_3550160	chr11	3548292	3550160	ENSMUSG00000034543.8	Morc2a	ENSMUST00000140242.1	protein_coding	+
chr11_3548292_3550160	chr11	3548292	3550160	ENSMUSG00000034543.8	Morc2a	ENSMUST00000096441.3	protein_coding	+
chr11_3548292_3550160	chr11	3548292	3550160	ENSMUSG00000056579.9	Tug1	ENSMUST00000144852.1	processed_transcript	-
chr11_3673821_3675831	chr11	3673821	3675831	ENSMUSG00000020435.10	Osbp2	ENSMUST00000155197.1	protein_coding	-
chr11_3673821_3675831	chr11	3673821	3675831	ENSMUSG00000020435.10	Osbp2	ENSMUST00000127371.1	protein_coding	-
chr11_3673821_3675831	chr11	3673821	3675831	ENSMUSG00000020435.10	Osbp2	ENSMUST00000167378.1	protein_coding	-
chr11_3673821_3675831	chr11	3673821	3675831	ENSMUSG00000020435.10	Osbp2	ENSMUST00000101633.1	protein_coding	-
chr11_3763067_3764567	chr11	3763067	3764567	ENSMUSG00000020435.10	Osbp2	ENSMUST00000135250.1	processed_transcript	-
chr11_3763067_3764567	chr11	3763067	3764567	ENSMUSG00000020435.10	Osbp2	ENSMUST00000070552.7	protein_coding	-
chr11_3794468_3796642	chr11	3794468	3796642	ENSMUSG00000047205.6	Dusp18	ENSMUST00000109996.1	protein_coding	+
chr11_3794468_3796642	chr11	3794468	3796642	ENSMUSG00000047205.6	Dusp18	ENSMUST00000055931.4	protein_coding	+
chr11_3794468_3796642	chr11	3794468	3796642	ENSMUSG00000020434.4	4921536K21Rik	ENSMUST00000020712.4	protein_coding	-
chr11_3812848_3814903	chr11	3812848	3814903	ENSMUSG00000048807.2	Slc35e4	ENSMUST00000051207.1	protein_coding	-
chr11_3812848_3814903	chr11	3812848	3814903	ENSMUSG00000048807.2	Slc35e4	ENSMUST00000109995.1	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000109993.2	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000109989.3	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000109990.1	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000109992.1	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000109991.1	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000020710.4	protein_coding	-
chr11_3831369_3832454	chr11	3831369	3832454	ENSMUSG00000020432.6	Tcn2	ENSMUST00000109988.1	protein_coding	-
chr11_3863206_3865140	chr11	3863206	3865140	ENSMUSG00000020430.6	Pes1	ENSMUST00000109985.1	protein_coding	+
chr11_3863206_3865140	chr11	3863206	3865140	ENSMUSG00000020430.6	Pes1	ENSMUST00000020705.4	protein_coding	+
chr11_3863206_3865140	chr11	3863206	3865140	ENSMUSG00000020430.6	Pes1	ENSMUST00000130973.1	processed_transcript	+
chr11_3863206_3865140	chr11	3863206	3865140	ENSMUSG00000020430.6	Pes1	ENSMUST00000137544.1	processed_transcript	+
chr11_3882770_3884637	chr11	3882770	3884637	ENSMUSG00000049721.8	Gal3st1	ENSMUST00000078757.1	protein_coding	+
chr11_3882770_3884637	chr11	3882770	3884637	ENSMUSG00000049721.8	Gal3st1	ENSMUST00000063004.7	protein_coding	+
chr11_3889554_3890446	chr11	3889554	3890446	ENSMUSG00000049721.8	Gal3st1	ENSMUST00000109981.1	protein_coding	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000129689.1	processed_transcript	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000137324.1	processed_transcript	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000126423.1	processed_transcript	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000131171.1	processed_transcript	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000019512.7	protein_coding	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000136222.1	processed_transcript	+
chr11_3931059_3932387	chr11	3931059	3932387	ENSMUSG00000019368.7	Sec14l4	ENSMUST00000125351.1	processed_transcript	+
chr11_3964633_3965078	chr11	3964633	3965078	ENSMUSG00000054986.7	Sec14l3	ENSMUST00000068322.6	protein_coding	+
chr11_3964633_3965078	chr11	3964633	3965078	ENSMUSG00000054986.7	Sec14l3	ENSMUST00000129330.1	retained_intron	+
chr11_3964633_3965078	chr11	3964633	3965078	ENSMUSG00000054986.7	Sec14l3	ENSMUST00000123208.1	processed_transcript	+
chr11_3964633_3965078	chr11	3964633	3965078	ENSMUSG00000054986.7	Sec14l3	ENSMUST00000125898.1	processed_transcript	+
chr11_3994065_3997339	chr11	3994065	3997339	ENSMUSG00000004748.5	Mtfp1	ENSMUST00000123607.1	processed_transcript	-
chr11_3994065_3997339	chr11	3994065	3997339	ENSMUSG00000004748.5	Mtfp1	ENSMUST00000004868.5	protein_coding	-
chr11_4008661_4009122	chr11	4008661	4009122	ENSMUSG00000003585.7	Sec14l2	ENSMUST00000133631.1	processed_transcript	-
chr11_4008661_4009122	chr11	4008661	4009122	ENSMUSG00000003585.7	Sec14l2	ENSMUST00000132421.1	processed_transcript	-
chr11_4016475_4019189	chr11	4016475	4019189	ENSMUSG00000003585.7	Sec14l2	ENSMUST00000136420.1	processed_transcript	-
chr11_4016475_4019189	chr11	4016475	4019189	ENSMUSG00000003585.7	Sec14l2	ENSMUST00000123901.1	processed_transcript	-
chr11_4016475_4019189	chr11	4016475	4019189	ENSMUSG00000003585.7	Sec14l2	ENSMUST00000003681.7	protein_coding	-
chr11_4023055_4024386	chr11	4023055	4024386	ENSMUSG00000003585.7	Sec14l2	ENSMUST00000145173.1	processed_transcript	-
chr11_4034623_4036253	chr11	4034623	4036253	ENSMUSG00000003581.8	Rnf215	ENSMUST00000003677.4	protein_coding	+
chr11_4034623_4036253	chr11	4034623	4036253	ENSMUSG00000003581.8	Rnf215	ENSMUST00000145705.1	protein_coding	+
chr11_4034623_4036253	chr11	4034623	4036253	ENSMUSG00000003581.8	Rnf215	ENSMUST00000124670.1	protein_coding	+
chr11_4034623_4036253	chr11	4034623	4036253	ENSMUSG00000003581.8	Rnf215	ENSMUST00000127165.1	processed_transcript	+
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000002129.5	Sf3a1	ENSMUST00000002198.3	protein_coding	+
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000002129.5	Sf3a1	ENSMUST00000129583.1	processed_transcript	+
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000002129.5	Sf3a1	ENSMUST00000132666.1	retained_intron	+
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000051427.8	Ccdc157	ENSMUST00000132712.1	processed_transcript	-
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000051427.8	Ccdc157	ENSMUST00000133962.1	processed_transcript	-
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000051427.8	Ccdc157	ENSMUST00000139099.1	processed_transcript	-
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000051427.8	Ccdc157	ENSMUST00000093381.4	protein_coding	-
chr11_4059874_4061278	chr11	4059874	4061278	ENSMUSG00000051427.8	Ccdc157	ENSMUST00000101626.2	protein_coding	-
chr11_4077372_4078259	chr11	4077372	4078259	ENSMUSG00000002129.5	Sf3a1	ENSMUST00000133095.1	retained_intron	+
chr11_4086251_4088054	chr11	4086251	4088054	ENSMUSG00000034412.6	Tbc1d10a	ENSMUST00000041042.6	protein_coding	+
chr11_4086251_4088054	chr11	4086251	4088054	ENSMUSG00000034412.6	Tbc1d10a	ENSMUST00000147485.1	processed_transcript	+
chr11_4105014_4105656	chr11	4105014	4105656	ENSMUSG00000034412.6	Tbc1d10a	ENSMUST00000151672.1	processed_transcript	+
chr11_4117784_4118743	chr11	4117784	4118743	ENSMUSG00000020424.3	Gatsl3	ENSMUST00000020699.3	protein_coding	+
chr11_4135732_4138105	chr11	4135732	4138105	ENSMUSG00000058755.3	Osm	ENSMUST00000075221.2	protein_coding	+
chr11_4135732_4138105	chr11	4135732	4138105	ENSMUSG00000058755.3	Osm	ENSMUST00000131764.1	processed_transcript	+
chr11_4156879_4157458	chr11	4156879	4157458	ENSMUSG00000034394.8	Lif	ENSMUST00000066283.5	protein_coding	+
chr11_4157550_4159328	chr11	4157550	4159328	ENSMUSG00000034394.8	Lif	ENSMUST00000066283.5	protein_coding	+
chr11_4166342_4167547	chr11	4166342	4167547	ENSMUSG00000034394.8	Lif	ENSMUST00000154927.1	processed_transcript	+
chr11_4166342_4167547	chr11	4166342	4167547	ENSMUSG00000034394.8	Lif	ENSMUST00000040750.3	protein_coding	+
chr11_4185268_4185940	chr11	4185268	4185940	ENSMUSG00000085512.1	Gm11958	ENSMUST00000127224.1	lincRNA	+
chr11_4340521_4341471	chr11	4340521	4341471	ENSMUSG00000020419.4	Hormad2	ENSMUST00000130174.1	protein_coding	-
chr11_4340521_4341471	chr11	4340521	4341471	ENSMUSG00000020419.4	Hormad2	ENSMUST00000109949.1	protein_coding	-
chr11_4340521_4341471	chr11	4340521	4341471	ENSMUSG00000020419.4	Hormad2	ENSMUST00000109948.1	protein_coding	-
chr11_4340521_4341471	chr11	4340521	4341471	ENSMUSG00000020419.4	Hormad2	ENSMUST00000020689.3	nonsense_mediated_decay	-
chr11_4445976_4446333	chr11	4445976	4446333	ENSMUSG00000034354.10	Mtmr3	ENSMUST00000040448.6	protein_coding	-
chr11_4493507_4495474	chr11	4493507	4495474	ENSMUSG00000034354.10	Mtmr3	ENSMUST00000130716.1	nonsense_mediated_decay	-
chr11_4493507_4495474	chr11	4493507	4495474	ENSMUSG00000034354.10	Mtmr3	ENSMUST00000093376.5	protein_coding	-
chr11_4493507_4495474	chr11	4493507	4495474	ENSMUSG00000034354.10	Mtmr3	ENSMUST00000109943.3	protein_coding	-
chr11_4519966_4521110	chr11	4519966	4521110	ENSMUSG00000079010.1	Gm11032	ENSMUST00000109941.1	protein_coding	+
chr11_4527207_4527952	chr11	4527207	4527952	ENSMUSG00000056288.5	Gm11961	ENSMUST00000135775.1	antisense	-
chr11_4529811_4530352	chr11	4529811	4530352	ENSMUSG00000056288.5	Gm11961	ENSMUST00000141157.1	antisense	-
chr11_4536857_4538525	chr11	4536857	4538525	ENSMUSG00000020412.9	Ascc2	ENSMUST00000070257.7	protein_coding	+
chr11_4536857_4538525	chr11	4536857	4538525	ENSMUSG00000020412.9	Ascc2	ENSMUST00000109930.2	protein_coding	+
chr11_4603383_4605251	chr11	4603383	4605251	ENSMUSG00000009076.4	Zmat5	ENSMUST00000009220.4	protein_coding	+
chr11_4603383_4605251	chr11	4603383	4605251	ENSMUSG00000009076.4	Zmat5	ENSMUST00000154341.1	processed_transcript	+
chr11_4603383_4605251	chr11	4603383	4605251	ENSMUSG00000059534.8	Uqcr10	ENSMUST00000130236.1	processed_transcript	-
chr11_4603383_4605251	chr11	4603383	4605251	ENSMUSG00000059534.8	Uqcr10	ENSMUST00000151559.1	processed_transcript	-
chr11_4603383_4605251	chr11	4603383	4605251	ENSMUSG00000059534.8	Uqcr10	ENSMUST00000058407.5	protein_coding	-
chr11_4684412_4685175	chr11	4684412	4685175	ENSMUSG00000009073.9	Nf2	ENSMUST00000141342.2	retained_intron	-
chr11_4714350_4715411	chr11	4714350	4715411	ENSMUSG00000009073.9	Nf2	ENSMUST00000155600.1	processed_transcript	-
chr11_4714350_4715411	chr11	4714350	4715411	ENSMUSG00000009073.9	Nf2	ENSMUST00000166058.1	protein_coding	-
chr11_4716326_4716856	chr11	4716326	4716856	ENSMUSG00000009073.9	Nf2	ENSMUST00000152656.1	nonsense_mediated_decay	-
chr11_4732955_4733697	chr11	4732955	4733697	ENSMUSG00000009073.9	Nf2	ENSMUST00000109908.1	processed_transcript	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000172305.1	protein_coding	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000164190.1	protein_coding	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000053079.6	protein_coding	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000056290.6	protein_coding	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000167537.1	protein_coding	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000109907.1	protein_coding	-
chr11_4748404_4750010	chr11	4748404	4750010	ENSMUSG00000009073.9	Nf2	ENSMUST00000109910.2	protein_coding	-
chr11_4773566_4775383	chr11	4773566	4775383	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000038570.2	protein_coding	+
chr11_4773566_4775383	chr11	4773566	4775383	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000136552.1	nonsense_mediated_decay	+
chr11_4773566_4775383	chr11	4773566	4775383	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000093371.5	protein_coding	+
chr11_4773566_4775383	chr11	4773566	4775383	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000135405.1	processed_transcript	+
chr11_4782583_4784103	chr11	4782583	4784103	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000139737.1	protein_coding	+
chr11_4782583_4784103	chr11	4782583	4784103	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000149603.1	processed_transcript	+
chr11_4782583_4784103	chr11	4782583	4784103	ENSMUSG00000034285.8	Nipsnap1	ENSMUST00000141269.1	processed_transcript	+
chr11_4794687_4795869	chr11	4794687	4795869	ENSMUSG00000034274.4	Thoc5	ENSMUST00000101615.2	protein_coding	+
chr11_4794687_4795869	chr11	4794687	4795869	ENSMUSG00000034274.4	Thoc5	ENSMUST00000038237.1	protein_coding	+
chr11_4794687_4795869	chr11	4794687	4795869	ENSMUSG00000034274.4	Thoc5	ENSMUST00000109903.1	protein_coding	+
chr11_4846534_4848748	chr11	4846534	4848748	ENSMUSG00000020396.7	Nefh	ENSMUST00000020667.6	protein_coding	-
chr11_4846534_4848748	chr11	4846534	4848748	ENSMUSG00000020396.7	Nefh	ENSMUST00000093369.4	protein_coding	-
chr11_4886511_4887864	chr11	4886511	4887864	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000109897.1	protein_coding	+
chr11_4886511_4887864	chr11	4886511	4887864	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000009234.8	protein_coding	+
chr11_4886511_4887864	chr11	4886511	4887864	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000137292.1	processed_transcript	+
chr11_4886511_4887864	chr11	4886511	4887864	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000133014.1	processed_transcript	+
chr11_4886511_4887864	chr11	4886511	4887864	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000063477.5	protein_coding	+
chr11_4909339_4910380	chr11	4909339	4910380	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000144426.1	processed_transcript	+
chr11_4909339_4910380	chr11	4909339	4910380	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000101613.2	protein_coding	+
chr11_4937176_4937806	chr11	4937176	4937806	ENSMUSG00000009090.10	Ap1b1	ENSMUST00000142325.1	processed_transcript	+
chr11_4957696_4958984	chr11	4957696	4958984	ENSMUSG00000034209.3	Rasl10a	ENSMUST00000037218.1	protein_coding	+
chr11_4957696_4958984	chr11	4957696	4958984	ENSMUSG00000034209.3	Rasl10a	ENSMUST00000166787.1	protein_coding	+
chr11_4957696_4958984	chr11	4957696	4958984	ENSMUSG00000034209.3	Rasl10a	ENSMUST00000126974.1	processed_transcript	+
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000151936.1	processed_transcript	-
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000152257.1	protein_coding	-
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000156196.1	processed_transcript	-
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000109895.1	protein_coding	-
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000056649.6	protein_coding	-
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000037146.3	protein_coding	-
chr11_4964157_4965962	chr11	4964157	4965962	ENSMUSG00000034201.7	Gas2l1	ENSMUST00000122886.1	processed_transcript	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000101610.3	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000137370.1	processed_transcript	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000146879.1	processed_transcript	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000134267.1	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000036320.5	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000150632.1	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000139742.1	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000109878.2	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000148761.1	protein_coding	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000034175.7	Rhbdd3	ENSMUST00000129016.1	processed_transcript	+
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000079004.1	Gm11031	ENSMUST00000109883.1	protein_coding	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000009079.10	Ewsr1	ENSMUST00000151847.1	processed_transcript	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000009079.10	Ewsr1	ENSMUST00000063232.6	protein_coding	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000009079.10	Ewsr1	ENSMUST00000093365.5	protein_coding	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000009079.10	Ewsr1	ENSMUST00000102930.3	protein_coding	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000009079.10	Ewsr1	ENSMUST00000073308.4	protein_coding	-
chr11_4997910_5000286	chr11	4997910	5000286	ENSMUSG00000009079.10	Ewsr1	ENSMUST00000079949.6	protein_coding	-
chr11_5029036_5029580	chr11	5029036	5029580	ENSMUSG00000034164.10	Emid1	ENSMUST00000153308.1	nonsense_mediated_decay	-
chr11_5029036_5029580	chr11	5029036	5029580	ENSMUSG00000034164.10	Emid1	ENSMUST00000132196.1	retained_intron	-
chr11_5029036_5029580	chr11	5029036	5029580	ENSMUSG00000034164.10	Emid1	ENSMUST00000151906.1	protein_coding	-
chr11_5050438_5051287	chr11	5050438	5051287	ENSMUSG00000034164.10	Emid1	ENSMUST00000138551.1	processed_transcript	-
chr11_5051619_5052387	chr11	5051619	5052387	ENSMUSG00000034164.10	Emid1	ENSMUST00000156492.1	nonsense_mediated_decay	-
chr11_5051619_5052387	chr11	5051619	5052387	ENSMUSG00000034164.10	Emid1	ENSMUST00000163299.1	protein_coding	-
chr11_5051619_5052387	chr11	5051619	5052387	ENSMUSG00000034164.10	Emid1	ENSMUST00000036246.8	protein_coding	-
chr11_5051619_5052387	chr11	5051619	5052387	ENSMUSG00000034164.10	Emid1	ENSMUST00000062821.6	protein_coding	-
chr11_5160699_5162539	chr11	5160699	5162539	ENSMUSG00000020393.9	Kremen1	ENSMUST00000020662.8	protein_coding	-
chr11_5281199_5281940	chr11	5281199	5281940	ENSMUSG00000041961.7	Znrf3	ENSMUST00000172492.1	protein_coding	-
chr11_5281199_5281940	chr11	5281199	5281940	ENSMUSG00000041961.7	Znrf3	ENSMUST00000049538.4	protein_coding	-
chr11_5342815_5345815	chr11	5342815	5345815	ENSMUSG00000041961.7	Znrf3	ENSMUST00000143746.2	protein_coding	-
chr11_5342815_5345815	chr11	5342815	5345815	ENSMUSG00000041961.7	Znrf3	ENSMUST00000109867.1	protein_coding	-
chr11_5397972_5401662	chr11	5397972	5401662	ENSMUSG00000085189.1	Gm11963	ENSMUST00000149826.1	antisense	+
chr11_5420306_5422362	chr11	5420306	5422362	ENSMUSG00000020484.11	Xbp1	ENSMUST00000063084.9	protein_coding	+
chr11_5420306_5422362	chr11	5420306	5422362	ENSMUSG00000020484.11	Xbp1	ENSMUST00000167803.1	protein_coding	+
chr11_5420306_5422362	chr11	5420306	5422362	ENSMUSG00000020484.11	Xbp1	ENSMUST00000109866.3	protein_coding	+
chr11_5420306_5422362	chr11	5420306	5422362	ENSMUSG00000020484.11	Xbp1	ENSMUST00000145588.1	processed_transcript	+
chr11_5420306_5422362	chr11	5420306	5422362	ENSMUSG00000020484.11	Xbp1	ENSMUST00000149623.1	processed_transcript	+
chr11_5420306_5422362	chr11	5420306	5422362	ENSMUSG00000020484.11	Xbp1	ENSMUST00000149159.2	protein_coding	+
chr11_5441005_5442725	chr11	5441005	5442725	ENSMUSG00000020482.4	Ccdc117	ENSMUST00000020776.4	protein_coding	-
chr11_5469404_5469791	chr11	5469404	5469791	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000109856.1	protein_coding	+
chr11_5469404_5469791	chr11	5469404	5469791	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000020773.2	protein_coding	+
chr11_5469404_5469791	chr11	5469404	5469791	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000109855.1	protein_coding	+
chr11_5469404_5469791	chr11	5469404	5469791	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000118112.2	protein_coding	+
chr11_5469918_5470119	chr11	5469918	5470119	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000118112.2	protein_coding	+
chr11_5473818_5474184	chr11	5473818	5474184	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000146773.1	processed_transcript	+
chr11_5528598_5528841	chr11	5528598	5528841	ENSMUSG00000020481.8	Ankrd36	ENSMUST00000137933.1	protein_coding	+
chr11_5578339_5578918	chr11	5578339	5578918	ENSMUSG00000081691.1	Gm11965	ENSMUST00000122017.1	transcribed_processed_pseudogene	-
chr11_5606330_5608119	chr11	5606330	5608119	ENSMUSG00000020477.4	Mrps24	ENSMUST00000123697.1	retained_intron	-
chr11_5606330_5608119	chr11	5606330	5608119	ENSMUSG00000020477.4	Mrps24	ENSMUST00000132874.1	retained_intron	-
chr11_5606330_5608119	chr11	5606330	5608119	ENSMUSG00000020477.4	Mrps24	ENSMUST00000020770.4	retained_intron	-
chr11_5606330_5608119	chr11	5606330	5608119	ENSMUSG00000020477.4	Mrps24	ENSMUST00000154330.1	protein_coding	-
chr11_5614956_5615534	chr11	5614956	5615534	ENSMUSG00000020477.4	Mrps24	ENSMUST00000149980.1	processed_transcript	-
chr11_5639744_5641763	chr11	5639744	5641763	ENSMUSG00000049680.10	Urgcp	ENSMUST00000140922.1	protein_coding	-
chr11_5639744_5641763	chr11	5639744	5641763	ENSMUSG00000049680.10	Urgcp	ENSMUST00000093362.5	protein_coding	-
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000083844.2	2210015D19Rik	ENSMUST00000137510.1	antisense	+
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000083844.2	2210015D19Rik	ENSMUST00000142942.1	antisense	+
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000083844.2	2210015D19Rik	ENSMUST00000131130.1	antisense	+
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000083844.2	2210015D19Rik	ENSMUST00000121354.1	transcribed_unprocessed_pseudogene	+
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000049680.10	Urgcp	ENSMUST00000118076.1	protein_coding	-
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000049680.10	Urgcp	ENSMUST00000120306.1	protein_coding	-
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000049680.10	Urgcp	ENSMUST00000170116.1	protein_coding	-
chr11_5661575_5662968	chr11	5661575	5662968	ENSMUSG00000049680.10	Urgcp	ENSMUST00000053427.4	protein_coding	-
chr11_5687895_5689636	chr11	5687895	5689636	ENSMUSG00000020476.8	Dbnl	ENSMUST00000109845.1	protein_coding	+
chr11_5687895_5689636	chr11	5687895	5689636	ENSMUSG00000020476.8	Dbnl	ENSMUST00000020769.7	protein_coding	+
chr11_5687895_5689636	chr11	5687895	5689636	ENSMUSG00000020476.8	Dbnl	ENSMUST00000102928.4	protein_coding	+
chr11_5701818_5704181	chr11	5701818	5704181	ENSMUSG00000020475.3	Pgam2	ENSMUST00000020768.3	protein_coding	-
chr11_5729033_5730431	chr11	5729033	5730431	ENSMUSG00000020474.5	Polm	ENSMUST00000143478.1	processed_transcript	-
chr11_5736211_5736426	chr11	5736211	5736426	ENSMUSG00000020474.5	Polm	ENSMUST00000156913.1	processed_transcript	-
chr11_5737055_5738492	chr11	5737055	5738492	ENSMUSG00000020474.5	Polm	ENSMUST00000153987.1	processed_transcript	-
chr11_5737055_5738492	chr11	5737055	5738492	ENSMUSG00000020474.5	Polm	ENSMUST00000124564.1	processed_transcript	-
chr11_5737055_5738492	chr11	5737055	5738492	ENSMUSG00000020474.5	Polm	ENSMUST00000020767.3	protein_coding	-
chr11_5737055_5738492	chr11	5737055	5738492	ENSMUSG00000020474.5	Polm	ENSMUST00000109837.1	protein_coding	-
chr11_5761564_5762323	chr11	5761564	5762323	ENSMUSG00000020473.7	Aebp1	ENSMUST00000102923.3	protein_coding	+
chr11_5768322_5769088	chr11	5768322	5769088	ENSMUSG00000020473.7	Aebp1	ENSMUST00000138103.1	processed_transcript	+
chr11_5769348_5769575	chr11	5769348	5769575	ENSMUSG00000020473.7	Aebp1	ENSMUST00000138103.1	processed_transcript	+
chr11_5776723_5776950	chr11	5776723	5776950	ENSMUSG00000020471.5	Pold2	ENSMUST00000136714.1	retained_intron	-
chr11_5777456_5778951	chr11	5777456	5778951	ENSMUSG00000020471.5	Pold2	ENSMUST00000134957.1	processed_transcript	-
chr11_5777456_5778951	chr11	5777456	5778951	ENSMUSG00000020471.5	Pold2	ENSMUST00000153995.1	protein_coding	-
chr11_5777456_5778951	chr11	5777456	5778951	ENSMUSG00000020471.5	Pold2	ENSMUST00000102922.3	protein_coding	-
chr11_5798779_5799135	chr11	5798779	5799135	ENSMUSG00000020469.8	Myl7	ENSMUST00000102921.3	protein_coding	-
chr11_5801440_5802897	chr11	5801440	5802897	ENSMUSG00000041798.9	Gck	ENSMUST00000125434.1	protein_coding	-
chr11_5814951_5816676	chr11	5814951	5816676	ENSMUSG00000084819.1	Gm11967	ENSMUST00000135132.1	antisense	+
chr11_5814951_5816676	chr11	5814951	5816676	ENSMUSG00000041798.9	Gck	ENSMUST00000109823.2	protein_coding	-
chr11_5814951_5816676	chr11	5814951	5816676	ENSMUSG00000041798.9	Gck	ENSMUST00000109822.1	protein_coding	-
chr11_5849529_5850316	chr11	5849529	5850316	ENSMUSG00000041798.9	Gck	ENSMUST00000102920.3	protein_coding	-
chr11_5854946_5856364	chr11	5854946	5856364	ENSMUSG00000002741.9	Ykt6	ENSMUST00000002818.8	protein_coding	+
chr11_5883653_5883993	chr11	5883653	5883993	ENSMUSG00000057897.7	Camk2b	ENSMUST00000155755.1	processed_transcript	-
chr11_5899962_5901326	chr11	5899962	5901326	ENSMUSG00000057897.7	Camk2b	ENSMUST00000130427.1	processed_transcript	-
chr11_5899962_5901326	chr11	5899962	5901326	ENSMUSG00000057897.7	Camk2b	ENSMUST00000169173.1	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000129098.1	processed_transcript	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000123391.1	processed_transcript	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000154197.1	processed_transcript	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000101586.2	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000101585.3	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000019133.4	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000066431.7	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000002817.5	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000093355.5	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000109812.2	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000090443.3	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000109815.2	protein_coding	-
chr11_5963949_5966502	chr11	5963949	5966502	ENSMUSG00000057897.7	Camk2b	ENSMUST00000109813.2	protein_coding	-
chr11_6019166_6020008	chr11	6019166	6020008	ENSMUSG00000053838.7	Nudcd3	ENSMUST00000109805.2	protein_coding	-
chr11_6099352_6101029	chr11	6099352	6101029	ENSMUSG00000053838.7	Nudcd3	ENSMUST00000109806.2	protein_coding	-
chr11_6099352_6101029	chr11	6099352	6101029	ENSMUSG00000053838.7	Nudcd3	ENSMUST00000066496.3	protein_coding	-
chr11_6167072_6168370	chr11	6167072	6168370	ENSMUSG00000004393.4	Ddx56	ENSMUST00000155874.1	retained_intron	-
chr11_6167072_6168370	chr11	6167072	6168370	ENSMUSG00000004393.4	Ddx56	ENSMUST00000151446.1	protein_coding	-
chr11_6167072_6168370	chr11	6167072	6168370	ENSMUSG00000004393.4	Ddx56	ENSMUST00000004507.4	protein_coding	-
chr11_6173597_6175618	chr11	6173597	6175618	ENSMUSG00000004394.6	Tmed4	ENSMUST00000132147.1	protein_coding	-
chr11_6173597_6175618	chr11	6173597	6175618	ENSMUSG00000004394.6	Tmed4	ENSMUST00000130621.1	retained_intron	-
chr11_6173597_6175618	chr11	6173597	6175618	ENSMUSG00000004394.6	Tmed4	ENSMUST00000004508.6	protein_coding	-
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000003461.8	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000165203.1	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000109797.2	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000079291.6	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000125929.1	retained_intron	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000101554.2	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000093350.3	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000101555.1	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000140765.1	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000135124.1	protein_coding	+
chr11_6191006_6192974	chr11	6191006	6192974	ENSMUSG00000020456.10	Ogdh	ENSMUST00000081894.4	protein_coding	+
chr11_6288647_6290031	chr11	6288647	6290031	ENSMUSG00000041164.8	Zmiz2	ENSMUST00000109787.1	protein_coding	+
chr11_6288647_6290031	chr11	6288647	6290031	ENSMUSG00000041164.8	Zmiz2	ENSMUST00000012612.4	protein_coding	+
chr11_6288647_6290031	chr11	6288647	6290031	ENSMUSG00000041164.8	Zmiz2	ENSMUST00000109786.1	protein_coding	+
chr11_6295584_6295941	chr11	6295584	6295941	ENSMUSG00000041164.8	Zmiz2	ENSMUST00000109785.1	protein_coding	+
chr11_6314935_6317097	chr11	6314935	6317097	ENSMUSG00000071866.5	Ppia	ENSMUST00000132846.1	protein_coding	+
chr11_6314935_6317097	chr11	6314935	6317097	ENSMUSG00000071866.5	Ppia	ENSMUST00000135789.1	retained_intron	+
chr11_6314935_6317097	chr11	6314935	6317097	ENSMUSG00000071866.5	Ppia	ENSMUST00000090749.6	processed_transcript	+
chr11_6314935_6317097	chr11	6314935	6317097	ENSMUSG00000071866.5	Ppia	ENSMUST00000137829.1	retained_intron	+
chr11_6314935_6317097	chr11	6314935	6317097	ENSMUSG00000071866.5	Ppia	ENSMUST00000155824.1	retained_intron	+
chr11_6343273_6345087	chr11	6343273	6345087	ENSMUSG00000041126.8	H2afv	ENSMUST00000093346.4	protein_coding	-
chr11_6343273_6345087	chr11	6343273	6345087	ENSMUSG00000041126.8	H2afv	ENSMUST00000109737.1	protein_coding	-
chr11_6343273_6345087	chr11	6343273	6345087	ENSMUSG00000041126.8	H2afv	ENSMUST00000060240.7	protein_coding	-
chr11_6343273_6345087	chr11	6343273	6345087	ENSMUSG00000041126.8	H2afv	ENSMUST00000109739.2	protein_coding	-
chr11_6374812_6376649	chr11	6374812	6376649	ENSMUSG00000086839.1	Gm11973	ENSMUST00000127488.1	antisense	+
chr11_6374812_6376649	chr11	6374812	6376649	ENSMUSG00000086839.1	Gm11973	ENSMUST00000155498.1	antisense	+
chr11_6374812_6376649	chr11	6374812	6376649	ENSMUSG00000086839.1	Gm11973	ENSMUST00000124274.1	antisense	+
chr11_6374812_6376649	chr11	6374812	6376649	ENSMUSG00000091207.1	Purb	ENSMUST00000172258.1	protein_coding	-
chr11_6408476_6408845	chr11	6408476	6408845	ENSMUSG00000020437.6	Myo1g	ENSMUST00000134639.1	retained_intron	-
chr11_6419456_6420494	chr11	6419456	6420494	ENSMUSG00000020437.6	Myo1g	ENSMUST00000134489.1	protein_coding	-
chr11_6420609_6421253	chr11	6420609	6421253	ENSMUSG00000020437.6	Myo1g	ENSMUST00000146536.1	nonsense_mediated_decay	-
chr11_6420609_6421253	chr11	6420609	6421253	ENSMUSG00000020437.6	Myo1g	ENSMUST00000156878.1	retained_intron	-
chr11_6420609_6421253	chr11	6420609	6421253	ENSMUSG00000020437.6	Myo1g	ENSMUST00000144725.1	nonsense_mediated_decay	-
chr11_6420609_6421253	chr11	6420609	6421253	ENSMUSG00000020437.6	Myo1g	ENSMUST00000003459.3	protein_coding	-
chr11_6428016_6429230	chr11	6428016	6429230	ENSMUSG00000064513.1	SNORA9	ENSMUST00000082579.1	snoRNA	-
chr11_6428016_6429230	chr11	6428016	6429230	ENSMUSG00000085156.1	Gm11974	ENSMUST00000134527.1	processed_transcript	-
chr11_6428016_6429230	chr11	6428016	6429230	ENSMUSG00000085156.1	Gm11974	ENSMUST00000124818.1	processed_transcript	-
chr11_6428016_6429230	chr11	6428016	6429230	ENSMUSG00000085156.1	Gm11974	ENSMUST00000147762.1	processed_transcript	-
chr11_6446014_6448411	chr11	6446014	6448411	ENSMUSG00000000378.8	Ccm2	ENSMUST00000000388.8	protein_coding	+
chr11_6446014_6448411	chr11	6446014	6448411	ENSMUSG00000000378.8	Ccm2	ENSMUST00000159007.1	protein_coding	+
chr11_6446014_6448411	chr11	6446014	6448411	ENSMUSG00000088688.1	SNORA70	ENSMUST00000158063.1	snoRNA	-
chr11_6460088_6460383	chr11	6460088	6460383	ENSMUSG00000000378.8	Ccm2	ENSMUST00000109722.2	protein_coding	+
chr11_6460591_6461766	chr11	6460591	6461766	ENSMUSG00000000378.8	Ccm2	ENSMUST00000161501.1	nonsense_mediated_decay	+
chr11_6460591_6461766	chr11	6460591	6461766	ENSMUSG00000000378.8	Ccm2	ENSMUST00000144293.1	processed_transcript	+
chr11_6460591_6461766	chr11	6460591	6461766	ENSMUSG00000000378.8	Ccm2	ENSMUST00000160633.1	protein_coding	+
chr11_6468373_6469994	chr11	6468373	6469994	ENSMUSG00000000378.8	Ccm2	ENSMUST00000109721.1	protein_coding	+
chr11_6504882_6506606	chr11	6504882	6506606	ENSMUSG00000041073.3	Nacad	ENSMUST00000045713.3	protein_coding	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000144463.1	protein_coding	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000131815.1	processed_transcript	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000136682.1	protein_coding	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000150697.1	nonsense_mediated_decay	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000093343.5	protein_coding	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000000394.7	protein_coding	-
chr11_6525486_6526849	chr11	6525486	6526849	ENSMUSG00000000384.8	Tbrg4	ENSMUST00000156969.1	nonsense_mediated_decay	-
chr11_6550516_6550893	chr11	6550516	6550893	ENSMUSG00000086373.2	Gm11978	ENSMUST00000122315.1	transcribed_processed_pseudogene	-
chr11_6558169_6558780	chr11	6558169	6558780	ENSMUSG00000041046.7	Ramp3	ENSMUST00000045374.7	protein_coding	+
chr11_6558169_6558780	chr11	6558169	6558780	ENSMUSG00000041046.7	Ramp3	ENSMUST00000139540.1	processed_transcript	+
chr11_6558169_6558780	chr11	6558169	6558780	ENSMUSG00000086373.2	Gm11978	ENSMUST00000143152.1	antisense	-
chr11_6560264_6560553	chr11	6560264	6560553	ENSMUSG00000086373.2	Gm11978	ENSMUST00000142928.1	antisense	-
chr11_6560264_6560553	chr11	6560264	6560553	ENSMUSG00000086373.2	Gm11978	ENSMUST00000127510.2	antisense	-
chr11_6619912_6620338	chr11	6619912	6620338	ENSMUSG00000086808.1	Gm11981	ENSMUST00000139769.1	processed_transcript	-
chr11_6761913_6762755	chr11	6761913	6762755	ENSMUSG00000082333.1	Gm11984	ENSMUST00000118142.1	transcribed_processed_pseudogene	-
chr11_6962543_6963531	chr11	6962543	6963531	ENSMUSG00000020431.5	Adcy1	ENSMUST00000020706.4	protein_coding	+
chr11_6963641_6965864	chr11	6963641	6965864	ENSMUSG00000020431.5	Adcy1	ENSMUST00000020706.4	protein_coding	+
chr11_7097256_7098475	chr11	7097256	7098475	ENSMUSG00000020429.7	Igfbp1	ENSMUST00000020704.7	protein_coding	+
chr11_7112906_7115027	chr11	7112906	7115027	ENSMUSG00000020427.5	Igfbp3	ENSMUST00000135887.2	protein_coding	-
chr11_7112906_7115027	chr11	7112906	7115027	ENSMUSG00000020427.5	Igfbp3	ENSMUST00000020702.4	protein_coding	-
chr11_8367046_8369645	chr11	8367046	8369645	ENSMUSG00000020422.7	Tns3	ENSMUST00000129074.1	processed_transcript	-
chr11_8563436_8565097	chr11	8563436	8565097	ENSMUSG00000020422.7	Tns3	ENSMUST00000020695.6	protein_coding	-
chr11_8763628_8764521	chr11	8763628	8764521	ENSMUSG00000046634.5	Pkd1l1	ENSMUST00000155886.1	processed_transcript	-
chr11_8910201_8911725	chr11	8910201	8911725	ENSMUSG00000020413.5	Hus1	ENSMUST00000127578.1	processed_transcript	-
chr11_8910201_8911725	chr11	8910201	8911725	ENSMUSG00000020413.5	Hus1	ENSMUST00000146002.1	retained_intron	-
chr11_8910201_8911725	chr11	8910201	8911725	ENSMUSG00000020413.5	Hus1	ENSMUST00000139877.1	retained_intron	-
chr11_8910201_8911725	chr11	8910201	8911725	ENSMUSG00000020413.5	Hus1	ENSMUST00000152890.1	retained_intron	-
chr11_8910201_8911725	chr11	8910201	8911725	ENSMUSG00000020413.5	Hus1	ENSMUST00000020683.3	protein_coding	-
chr11_8910201_8911725	chr11	8910201	8911725	ENSMUSG00000020413.5	Hus1	ENSMUST00000129115.1	nonsense_mediated_decay	-
chr11_8938954_8939891	chr11	8938954	8939891	ENSMUSG00000040985.7	Sun3	ENSMUST00000043377.5	protein_coding	-
chr11_8948136_8949505	chr11	8948136	8949505	ENSMUSG00000040978.4	Gm11992	ENSMUST00000043285.4	protein_coding	+
chr11_8948136_8949505	chr11	8948136	8949505	ENSMUSG00000040985.7	Sun3	ENSMUST00000102909.1	protein_coding	-
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000020677.1	protein_coding	+
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000101525.2	protein_coding	+
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000170444.1	protein_coding	+
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000164791.1	protein_coding	+
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000130522.1	protein_coding	+
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000168121.1	retained_intron	+
chr11_9017110_9019390	chr11	9017110	9019390	ENSMUSG00000020407.7	Upp1	ENSMUST00000172452.1	protein_coding	+
chr11_9090811_9092181	chr11	9090811	9092181	ENSMUSG00000004668.7	Abca13	ENSMUST00000042740.6	protein_coding	+
chr11_9090811_9092181	chr11	9090811	9092181	ENSMUSG00000004668.7	Abca13	ENSMUST00000141233.1	processed_transcript	+
chr11_9090811_9092181	chr11	9090811	9092181	ENSMUSG00000004668.7	Abca13	ENSMUST00000109684.1	protein_coding	+
chr11_11013528_11016613	chr11	11013528	11016613	ENSMUSG00000050830.10	Vwc2	ENSMUST00000109681.1	protein_coding	+
chr11_11013528_11016613	chr11	11013528	11016613	ENSMUSG00000050830.10	Vwc2	ENSMUST00000129670.1	nonsense_mediated_decay	+
chr11_11013528_11016613	chr11	11013528	11016613	ENSMUSG00000050830.10	Vwc2	ENSMUST00000056344.3	protein_coding	+
chr11_11013528_11016613	chr11	11013528	11016613	ENSMUSG00000050830.10	Vwc2	ENSMUST00000154155.1	processed_transcript	+
chr11_11361465_11362795	chr11	11361465	11362795	ENSMUSG00000020191.4	4930415F15Rik	ENSMUST00000170661.1	processed_transcript	+
chr11_11361465_11362795	chr11	11361465	11362795	ENSMUSG00000020193.3	Zpbp	ENSMUST00000020413.3	protein_coding	-
chr11_11389380_11389594	chr11	11389380	11389594	ENSMUSG00000020191.4	4930415F15Rik	ENSMUST00000109678.1	protein_coding	+
chr11_11455672_11458225	chr11	11455672	11458225	ENSMUSG00000087452.1	Gm11998	ENSMUST00000146304.1	antisense	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000126058.1	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000141436.1	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000065433.5	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000109673.1	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000095252.4	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000081221.5	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000076700.4	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000048122.6	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000018798.6	protein_coding	+
chr11_11584595_11586490	chr11	11584595	11586490	ENSMUSG00000085652.1	Gm11999	ENSMUST00000145789.1	processed_transcript	-
chr11_11586569_11587056	chr11	11586569	11587056	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000018798.6	protein_coding	+
chr11_11589945_11590953	chr11	11589945	11590953	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000109674.2	protein_coding	+
chr11_11589945_11590953	chr11	11589945	11590953	ENSMUSG00000018654.10	Ikzf1	ENSMUST00000078183.5	protein_coding	+
chr11_11708499_11709702	chr11	11708499	11709702	ENSMUSG00000035455.6	Fignl1	ENSMUST00000150714.1	protein_coding	-
chr11_11708499_11709702	chr11	11708499	11709702	ENSMUSG00000035455.6	Fignl1	ENSMUST00000109664.1	protein_coding	-
chr11_11708499_11709702	chr11	11708499	11709702	ENSMUSG00000035455.6	Fignl1	ENSMUST00000047689.4	protein_coding	-
chr11_11708499_11709702	chr11	11708499	11709702	ENSMUSG00000035455.6	Fignl1	ENSMUST00000171938.1	protein_coding	-
chr11_11708499_11709702	chr11	11708499	11709702	ENSMUSG00000035455.6	Fignl1	ENSMUST00000171080.1	protein_coding	-
chr11_11708499_11709702	chr11	11708499	11709702	ENSMUSG00000035455.6	Fignl1	ENSMUST00000152345.1	processed_transcript	-
chr11_11721668_11722738	chr11	11721668	11722738	ENSMUSG00000020182.9	Ddc	ENSMUST00000136810.1	processed_transcript	-
chr11_11722800_11723055	chr11	11722800	11723055	ENSMUSG00000020182.9	Ddc	ENSMUST00000136810.1	processed_transcript	-
chr11_11736358_11737425	chr11	11736358	11737425	ENSMUSG00000020182.9	Ddc	ENSMUST00000134401.1	processed_transcript	-
chr11_11767774_11768784	chr11	11767774	11768784	ENSMUSG00000086391.1	1700042O10Rik	ENSMUST00000151032.1	antisense	+
chr11_11797519_11798683	chr11	11797519	11798683	ENSMUSG00000020182.9	Ddc	ENSMUST00000066237.3	protein_coding	-
chr11_11846210_11846500	chr11	11846210	11846500	ENSMUSG00000020176.10	Grb10	ENSMUST00000148254.1	processed_transcript	-
chr11_11925293_11927559	chr11	11925293	11927559	ENSMUSG00000020176.10	Grb10	ENSMUST00000143915.1	protein_coding	-
chr11_11925293_11927559	chr11	11925293	11927559	ENSMUSG00000020176.10	Grb10	ENSMUST00000150972.1	protein_coding	-
chr11_11936357_11938147	chr11	11936357	11938147	ENSMUSG00000020176.10	Grb10	ENSMUST00000078449.3	protein_coding	-
chr11_11936357_11938147	chr11	11936357	11938147	ENSMUSG00000020176.10	Grb10	ENSMUST00000079913.5	protein_coding	-
chr11_11936357_11938147	chr11	11936357	11938147	ENSMUSG00000020176.10	Grb10	ENSMUST00000109656.2	protein_coding	-
chr11_11936357_11938147	chr11	11936357	11938147	ENSMUSG00000020176.10	Grb10	ENSMUST00000093321.5	protein_coding	-
chr11_12214323_12215151	chr11	12214323	12215151	ENSMUSG00000086584.2	Gm12002	ENSMUST00000153794.2	antisense	+
chr11_12214323_12215151	chr11	12214323	12215151	ENSMUSG00000086584.2	Gm12002	ENSMUST00000143593.2	antisense	+
chr11_12220601_12222742	chr11	12220601	12222742	ENSMUSG00000086584.2	Gm12002	ENSMUST00000174550.1	antisense	+
chr11_12311982_12312261	chr11	12311982	12312261	ENSMUSG00000020173.10	Cobl	ENSMUST00000174874.1	protein_coding	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000130572.1	retained_intron	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000093316.3	protein_coding	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000172956.1	nonsense_mediated_decay	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000109651.2	protein_coding	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000093315.4	protein_coding	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000109650.1	protein_coding	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000046755.7	protein_coding	-
chr11_12363665_12365701	chr11	12363665	12365701	ENSMUSG00000020173.10	Cobl	ENSMUST00000172919.1	protein_coding	-
chr11_12592738_12593148	chr11	12592738	12593148	ENSMUSG00000088509.1	SNORA17	ENSMUST00000157884.1	snoRNA	+
chr11_12837034_12837278	chr11	12837034	12837278	ENSMUSG00000093365.1	AL663080.1	ENSMUST00000175624.1	miRNA	-
chr11_12837564_12837867	chr11	12837564	12837867	ENSMUSG00000083859.1	Gm12003	ENSMUST00000118518.1	transcribed_processed_pseudogene	-
chr11_14078969_14079600	chr11	14078969	14079600	ENSMUSG00000085452.1	4930554G24Rik	ENSMUST00000126260.1	lincRNA	-
chr11_14498925_14499952	chr11	14498925	14499952	ENSMUSG00000084135.2	Pom121l12	ENSMUST00000165452.1	transcribed_processed_pseudogene	+
chr11_14498925_14499952	chr11	14498925	14499952	ENSMUSG00000084135.2	Pom121l12	ENSMUST00000117584.1	transcribed_processed_pseudogene	+
chr11_14498925_14499952	chr11	14498925	14499952	ENSMUSG00000085561.1	1700046C09Rik	ENSMUST00000139973.1	lincRNA	-
chr11_14949276_14950333	chr11	14949276	14950333	ENSMUSG00000084183.1	Gm12009	ENSMUST00000121361.1	transcribed_processed_pseudogene	+
chr11_16156975_16159056	chr11	16156975	16159056	ENSMUSG00000048834.8	Vstm2a	ENSMUST00000109645.2	protein_coding	+
chr11_16156975_16159056	chr11	16156975	16159056	ENSMUSG00000048834.8	Vstm2a	ENSMUST00000093308.5	protein_coding	+
chr11_16156975_16159056	chr11	16156975	16159056	ENSMUSG00000048834.8	Vstm2a	ENSMUST00000109647.2	protein_coding	+
chr11_16407267_16408899	chr11	16407267	16408899	ENSMUSG00000078974.3	Sec61g	ENSMUST00000138695.1	retained_intron	-
chr11_16407267_16408899	chr11	16407267	16408899	ENSMUSG00000078974.3	Sec61g	ENSMUST00000109641.1	protein_coding	-
chr11_16407267_16408899	chr11	16407267	16408899	ENSMUSG00000078974.3	Sec61g	ENSMUST00000166950.1	protein_coding	-
chr11_16407267_16408899	chr11	16407267	16408899	ENSMUSG00000078974.3	Sec61g	ENSMUST00000109642.1	protein_coding	-
chr11_16407267_16408899	chr11	16407267	16408899	ENSMUSG00000078974.3	Sec61g	ENSMUST00000109643.1	protein_coding	-
chr11_16651214_16653609	chr11	16651214	16653609	ENSMUSG00000020122.9	Egfr	ENSMUST00000102884.3	protein_coding	+
chr11_16651214_16653609	chr11	16651214	16653609	ENSMUSG00000020122.9	Egfr	ENSMUST00000020325.4	protein_coding	+
chr11_16651214_16653609	chr11	16651214	16653609	ENSMUSG00000020122.9	Egfr	ENSMUST00000020329.6	protein_coding	+
chr11_16651214_16653609	chr11	16651214	16653609	ENSMUSG00000020122.9	Egfr	ENSMUST00000139722.1	processed_transcript	+
chr11_16730447_16731153	chr11	16730447	16731153	ENSMUSG00000085091.1	E230015J15Rik	ENSMUST00000150329.1	antisense	-
chr11_16777572_16778324	chr11	16777572	16778324	ENSMUSG00000020122.9	Egfr	ENSMUST00000125984.1	protein_coding	+
chr11_16804356_16805271	chr11	16804356	16805271	ENSMUSG00000020122.9	Egfr	ENSMUST00000138518.1	processed_transcript	+
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000044966.4	Fbxo48	ENSMUST00000109635.1	protein_coding	+
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000044966.4	Fbxo48	ENSMUST00000061327.1	protein_coding	+
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000142777.1	processed_transcript	-
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000139271.1	processed_transcript	-
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000136053.1	processed_transcript	-
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000129735.1	processed_transcript	-
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000123734.1	processed_transcript	-
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000139493.1	processed_transcript	-
chr11_16850584_16851949	chr11	16850584	16851949	ENSMUSG00000087060.1	2810442I21Rik	ENSMUST00000130392.1	processed_transcript	-
chr11_16902575_16903159	chr11	16902575	16903159	ENSMUSG00000020120.9	Plek	ENSMUST00000156101.1	protein_coding	-
chr11_16907449_16909107	chr11	16907449	16909107	ENSMUSG00000020120.9	Plek	ENSMUST00000102881.3	protein_coding	-
chr11_16951133_16953325	chr11	16951133	16953325	ENSMUSG00000044629.5	Cnrip1	ENSMUST00000131515.1	protein_coding	+
chr11_16951133_16953325	chr11	16951133	16953325	ENSMUSG00000044629.5	Cnrip1	ENSMUST00000135637.1	retained_intron	+
chr11_16951133_16953325	chr11	16951133	16953325	ENSMUSG00000044629.5	Cnrip1	ENSMUST00000058159.5	protein_coding	+
chr11_16951133_16953325	chr11	16951133	16953325	ENSMUSG00000020120.9	Plek	ENSMUST00000020321.6	protein_coding	-
chr11_17058627_17060668	chr11	17058627	17060668	ENSMUSG00000033953.10	Ppp3r1	ENSMUST00000102880.4	protein_coding	+
chr11_17092121_17093089	chr11	17092121	17093089	ENSMUSG00000033953.10	Ppp3r1	ENSMUST00000154425.1	processed_transcript	+
chr11_17111152_17112634	chr11	17111152	17112634	ENSMUSG00000078970.4	Wdr92	ENSMUST00000172102.1	protein_coding	+
chr11_17111152_17112634	chr11	17111152	17112634	ENSMUSG00000078970.4	Wdr92	ENSMUST00000046955.6	protein_coding	+
chr11_17111152_17112634	chr11	17111152	17112634	ENSMUSG00000078970.4	Wdr92	ENSMUST00000165160.1	protein_coding	+
chr11_17111152_17112634	chr11	17111152	17112634	ENSMUSG00000020116.7	Pno1	ENSMUST00000123754.1	processed_transcript	-
chr11_17111152_17112634	chr11	17111152	17112634	ENSMUSG00000020116.7	Pno1	ENSMUST00000020317.7	protein_coding	-
chr11_17157391_17158538	chr11	17157391	17158538	ENSMUSG00000000581.2	C1d	ENSMUST00000131227.1	processed_transcript	+
chr11_17157391_17158538	chr11	17157391	17158538	ENSMUSG00000000581.2	C1d	ENSMUST00000135568.1	processed_transcript	+
chr11_17157391_17158538	chr11	17157391	17158538	ENSMUSG00000000581.2	C1d	ENSMUST00000000594.2	protein_coding	+
chr11_17157391_17158538	chr11	17157391	17158538	ENSMUSG00000000581.2	C1d	ENSMUST00000156784.1	protein_coding	+
chr11_17852864_17854290	chr11	17852864	17854290	ENSMUSG00000086468.1	2900053O20Rik	ENSMUST00000140161.1	antisense	+
chr11_17852864_17854290	chr11	17852864	17854290	ENSMUSG00000086468.1	2900053O20Rik	ENSMUST00000148496.1	antisense	+
chr11_17852864_17854290	chr11	17852864	17854290	ENSMUSG00000016984.7	Etaa1	ENSMUST00000076661.6	protein_coding	-
chr11_18393187_18393531	chr11	18393187	18393531	ENSMUSG00000085675.1	Gm12022	ENSMUST00000143311.1	lincRNA	-
chr11_18771008_18772133	chr11	18771008	18772133	ENSMUSG00000085743.1	8430419K02Rik	ENSMUST00000128654.1	processed_transcript	-
chr11_18913356_18913622	chr11	18913356	18913622	ENSMUSG00000087507.1	Gm16141	ENSMUST00000152073.1	antisense	+
chr11_18913774_18914257	chr11	18913774	18914257	ENSMUSG00000087507.1	Gm16141	ENSMUST00000152073.1	antisense	+
chr11_18918376_18921196	chr11	18918376	18921196	ENSMUSG00000020160.10	Meis1	ENSMUST00000137300.1	retained_intron	-
chr11_18918376_18921196	chr11	18918376	18921196	ENSMUSG00000020160.10	Meis1	ENSMUST00000125722.1	retained_intron	-
chr11_18918376_18921196	chr11	18918376	18921196	ENSMUSG00000020160.10	Meis1	ENSMUST00000144988.1	retained_intron	-
chr11_18918376_18921196	chr11	18918376	18921196	ENSMUSG00000020160.10	Meis1	ENSMUST00000102878.3	protein_coding	-
chr11_18918376_18921196	chr11	18918376	18921196	ENSMUSG00000020160.10	Meis1	ENSMUST00000068264.7	protein_coding	-
chr11_19823860_19826679	chr11	19823860	19826679	ENSMUSG00000045671.11	Spred2	ENSMUST00000093299.6	protein_coding	+
chr11_19823860_19826679	chr11	19823860	19826679	ENSMUSG00000045671.11	Spred2	ENSMUST00000093298.5	protein_coding	+
chr11_20012131_20013735	chr11	20012131	20013735	ENSMUSG00000020152.7	Actr2	ENSMUST00000134779.1	retained_intron	-
chr11_20012131_20013735	chr11	20012131	20013735	ENSMUSG00000020152.7	Actr2	ENSMUST00000132022.1	processed_transcript	-
chr11_20012131_20013735	chr11	20012131	20013735	ENSMUSG00000020152.7	Actr2	ENSMUST00000000137.7	protein_coding	-
chr11_20100583_20102179	chr11	20100583	20102179	ENSMUSG00000020149.10	Rab1	ENSMUST00000020358.5	protein_coding	+
chr11_20100583_20102179	chr11	20100583	20102179	ENSMUSG00000020149.10	Rab1	ENSMUST00000109602.1	protein_coding	+
chr11_20100583_20102179	chr11	20100583	20102179	ENSMUSG00000020149.10	Rab1	ENSMUST00000109601.1	protein_coding	+
chr11_20100583_20102179	chr11	20100583	20102179	ENSMUSG00000020149.10	Rab1	ENSMUST00000132285.1	processed_transcript	+
chr11_20100583_20102179	chr11	20100583	20102179	ENSMUSG00000020149.10	Rab1	ENSMUST00000163483.1	protein_coding	+
chr11_20100583_20102179	chr11	20100583	20102179	ENSMUSG00000020149.10	Rab1	ENSMUST00000152728.1	processed_transcript	+
chr11_20114635_20115107	chr11	20114635	20115107	ENSMUSG00000020149.10	Rab1	ENSMUST00000074741.7	protein_coding	+
chr11_20114635_20115107	chr11	20114635	20115107	ENSMUSG00000020149.10	Rab1	ENSMUST00000079816.6	protein_coding	+
chr11_20114635_20115107	chr11	20114635	20115107	ENSMUSG00000020149.10	Rab1	ENSMUST00000109599.2	protein_coding	+
chr11_20148291_20150265	chr11	20148291	20150265	ENSMUSG00000044066.8	Cep68	ENSMUST00000161218.1	retained_intron	-
chr11_20148291_20150265	chr11	20148291	20150265	ENSMUSG00000044066.8	Cep68	ENSMUST00000162811.1	protein_coding	-
chr11_20148291_20150265	chr11	20148291	20150265	ENSMUSG00000044066.8	Cep68	ENSMUST00000109596.1	protein_coding	-
chr11_20148291_20150265	chr11	20148291	20150265	ENSMUSG00000044066.8	Cep68	ENSMUST00000050611.7	protein_coding	-
chr11_20231844_20233548	chr11	20231844	20233548	ENSMUSG00000020142.6	Slc1a4	ENSMUST00000004634.6	protein_coding	-
chr11_20231844_20233548	chr11	20231844	20233548	ENSMUSG00000020142.6	Slc1a4	ENSMUST00000109594.1	protein_coding	-
chr11_20345161_20346716	chr11	20345161	20346716	ENSMUSG00000083878.3	Gm12034	ENSMUST00000119032.1	transcribed_processed_pseudogene	+
chr11_20442082_20444178	chr11	20442082	20444178	ENSMUSG00000049800.7	Sertad2	ENSMUST00000145328.1	processed_transcript	+
chr11_20442082_20444178	chr11	20442082	20444178	ENSMUSG00000049800.7	Sertad2	ENSMUST00000093292.4	protein_coding	+
chr11_20531238_20533484	chr11	20531238	20533484	ENSMUSG00000049800.7	Sertad2	ENSMUST00000109586.2	protein_coding	+
chr11_20547133_20548412	chr11	20547133	20548412	ENSMUSG00000049800.7	Sertad2	ENSMUST00000109585.1	protein_coding	+
chr11_20640479_20642923	chr11	20640479	20642923	ENSMUSG00000049659.7	Aftph	ENSMUST00000094376.2	protein_coding	-
chr11_20640479_20642923	chr11	20640479	20642923	ENSMUSG00000049659.7	Aftph	ENSMUST00000035350.5	protein_coding	-
chr11_20729060_20732082	chr11	20729060	20732082	ENSMUSG00000086749.1	Gm12037	ENSMUST00000123160.1	lincRNA	-
chr11_20729060_20732082	chr11	20729060	20732082	ENSMUSG00000042363.8	1110067D22Rik	ENSMUST00000132928.1	processed_transcript	-
chr11_20729060_20732082	chr11	20729060	20732082	ENSMUSG00000042363.8	1110067D22Rik	ENSMUST00000154300.1	processed_transcript	-
chr11_20729060_20732082	chr11	20729060	20732082	ENSMUSG00000042363.8	1110067D22Rik	ENSMUST00000144441.1	processed_transcript	-
chr11_20729060_20732082	chr11	20729060	20732082	ENSMUSG00000042363.8	1110067D22Rik	ENSMUST00000047028.8	protein_coding	-
chr11_20990837_20992385	chr11	20990837	20992385	ENSMUSG00000020134.7	Peli1	ENSMUST00000093290.5	protein_coding	+
chr11_20990837_20992385	chr11	20990837	20992385	ENSMUSG00000020134.7	Peli1	ENSMUST00000156122.1	retained_intron	+
chr11_20990837_20992385	chr11	20990837	20992385	ENSMUSG00000020134.7	Peli1	ENSMUST00000149675.1	retained_intron	+
chr11_21034582_21035317	chr11	21034582	21035317	ENSMUSG00000020134.7	Peli1	ENSMUST00000101477.1	protein_coding	+
chr11_21127811_21128245	chr11	21127811	21128245	ENSMUSG00000082898.1	Gm12041	ENSMUST00000121606.1	transcribed_processed_pseudogene	+
chr11_21138221_21139815	chr11	21138221	21139815	ENSMUSG00000020128.8	Vps54	ENSMUST00000094375.4	protein_coding	+
chr11_21138221_21139815	chr11	21138221	21139815	ENSMUSG00000020128.8	Vps54	ENSMUST00000006221.7	protein_coding	+
chr11_21138221_21139815	chr11	21138221	21139815	ENSMUSG00000020128.8	Vps54	ENSMUST00000109578.1	protein_coding	+
chr11_21213838_21214857	chr11	21213838	21214857	ENSMUSG00000020128.8	Vps54	ENSMUST00000153159.1	processed_transcript	+
chr11_21244601_21244817	chr11	21244601	21244817	ENSMUSG00000089555.1	Mir1933	ENSMUST00000158930.1	miRNA	-
chr11_21269599_21272021	chr11	21269599	21272021	ENSMUSG00000087253.1	Gm12043	ENSMUST00000131570.1	processed_transcript	+
chr11_21269599_21272021	chr11	21269599	21272021	ENSMUSG00000001891.10	Ugp2	ENSMUST00000060895.5	protein_coding	-
chr11_21269599_21272021	chr11	21269599	21272021	ENSMUSG00000001891.10	Ugp2	ENSMUST00000102875.4	protein_coding	-
chr11_21463524_21464276	chr11	21463524	21464276	ENSMUSG00000020321.9	Mdh1	ENSMUST00000144978.1	processed_transcript	-
chr11_21464781_21465428	chr11	21464781	21465428	ENSMUSG00000093168.1	AL663049.1	ENSMUST00000175427.1	miRNA	-
chr11_21470995_21472587	chr11	21470995	21472587	ENSMUSG00000020319.3	Wdpcp	ENSMUST00000020568.3	protein_coding	+
chr11_21470995_21472587	chr11	21470995	21472587	ENSMUSG00000020319.3	Wdpcp	ENSMUST00000131135.1	protein_coding	+
chr11_21470995_21472587	chr11	21470995	21472587	ENSMUSG00000020319.3	Wdpcp	ENSMUST00000149757.1	processed_transcript	+
chr11_21470995_21472587	chr11	21470995	21472587	ENSMUSG00000020321.9	Mdh1	ENSMUST00000125302.1	protein_coding	-
chr11_21470995_21472587	chr11	21470995	21472587	ENSMUSG00000020321.9	Mdh1	ENSMUST00000102874.4	protein_coding	-
chr11_21901578_21903152	chr11	21901578	21903152	ENSMUSG00000005917.8	Otx1	ENSMUST00000151835.2	nonsense_mediated_decay	-
chr11_21901578_21903152	chr11	21901578	21903152	ENSMUSG00000005917.8	Otx1	ENSMUST00000147486.2	protein_coding	-
chr11_21901578_21903152	chr11	21901578	21903152	ENSMUSG00000005917.8	Otx1	ENSMUST00000172395.2	retained_intron	-
chr11_21901578_21903152	chr11	21901578	21903152	ENSMUSG00000005917.8	Otx1	ENSMUST00000006071.7	protein_coding	-
chr11_22070761_22071686	chr11	22070761	22071686	ENSMUSG00000042302.7	Ehbp1	ENSMUST00000136762.1	processed_transcript	-
chr11_22185636_22188034	chr11	22185636	22188034	ENSMUSG00000042302.7	Ehbp1	ENSMUST00000134293.1	protein_coding	-
chr11_22185636_22188034	chr11	22185636	22188034	ENSMUSG00000042302.7	Ehbp1	ENSMUST00000045167.4	protein_coding	-
chr11_22185636_22188034	chr11	22185636	22188034	ENSMUSG00000042302.7	Ehbp1	ENSMUST00000109563.1	protein_coding	-
chr11_22412098_22413473	chr11	22412098	22413473	ENSMUSG00000049904.7	Tmem17	ENSMUST00000059319.7	protein_coding	+
chr11_22510337_22511475	chr11	22510337	22511475	ENSMUSG00000090797.1	Gm17335	ENSMUST00000167494.1	lincRNA	-
chr11_22517038_22518272	chr11	22517038	22518272	ENSMUSG00000086256.1	Gm12052	ENSMUST00000142151.1	lincRNA	+
chr11_22738889_22739150	chr11	22738889	22739150	ENSMUSG00000092455.1	RP23-242C19.6	ENSMUST00000174690.1	processed_transcript	+
chr11_22739340_22739568	chr11	22739340	22739568	ENSMUSG00000092455.1	RP23-242C19.6	ENSMUST00000174690.1	processed_transcript	+
chr11_22744791_22746842	chr11	22744791	22746842	ENSMUSG00000077621.1	SNORA63	ENSMUST00000104433.1	snoRNA	+
chr11_22746998_22748528	chr11	22746998	22748528	ENSMUSG00000077621.1	SNORA63	ENSMUST00000104433.1	snoRNA	+
chr11_22757851_22760771	chr11	22757851	22760771	ENSMUSG00000092626.1	RP23-242C19.5	ENSMUST00000174568.1	processed_transcript	+
chr11_22757851_22760771	chr11	22757851	22760771	ENSMUSG00000051650.10	B3gnt2	ENSMUST00000173660.1	protein_coding	-
chr11_22757851_22760771	chr11	22757851	22760771	ENSMUSG00000051650.10	B3gnt2	ENSMUST00000055549.3	protein_coding	-
chr11_22757851_22760771	chr11	22757851	22760771	ENSMUSG00000051650.10	B3gnt2	ENSMUST00000062844.10	protein_coding	-
chr11_22757851_22760771	chr11	22757851	22760771	ENSMUSG00000084081.2	Gm12057	ENSMUST00000117244.2	transcribed_processed_pseudogene	-
chr11_22856660_22857450	chr11	22856660	22857450	ENSMUSG00000051355.11	Commd1	ENSMUST00000161944.1	retained_intron	-
chr11_22871764_22873953	chr11	22871764	22873953	ENSMUSG00000044068.4	Zrsr1	ENSMUST00000049506.4	protein_coding	+
chr11_22871764_22873953	chr11	22871764	22873953	ENSMUSG00000051355.11	Commd1	ENSMUST00000162924.1	processed_transcript	-
chr11_22878774_22879064	chr11	22878774	22879064	ENSMUSG00000051355.11	Commd1	ENSMUST00000057843.5	protein_coding	-
chr11_22881516_22882735	chr11	22881516	22882735	ENSMUSG00000051355.11	Commd1	ENSMUST00000093270.5	protein_coding	-
chr11_22881516_22882735	chr11	22881516	22882735	ENSMUSG00000051355.11	Commd1	ENSMUST00000071068.8	protein_coding	-
chr11_22881516_22882735	chr11	22881516	22882735	ENSMUSG00000051355.11	Commd1	ENSMUST00000159081.1	protein_coding	-
chr11_22881516_22882735	chr11	22881516	22882735	ENSMUSG00000051355.11	Commd1	ENSMUST00000160826.1	protein_coding	-
chr11_22890082_22891222	chr11	22890082	22891222	ENSMUSG00000007739.4	Cct4	ENSMUST00000173867.1	protein_coding	+
chr11_22890082_22891222	chr11	22890082	22891222	ENSMUSG00000007739.4	Cct4	ENSMUST00000173853.1	nonsense_mediated_decay	+
chr11_22890082_22891222	chr11	22890082	22891222	ENSMUSG00000007739.4	Cct4	ENSMUST00000174244.1	retained_intron	+
chr11_22890082_22891222	chr11	22890082	22891222	ENSMUSG00000007739.4	Cct4	ENSMUST00000174047.1	nonsense_mediated_decay	+
chr11_22890082_22891222	chr11	22890082	22891222	ENSMUSG00000007739.4	Cct4	ENSMUST00000020562.4	protein_coding	+
chr11_22890082_22891222	chr11	22890082	22891222	ENSMUSG00000007739.4	Cct4	ENSMUST00000174659.1	nonsense_mediated_decay	+
chr11_22907132_22908763	chr11	22907132	22908763	ENSMUSG00000049811.9	Fam161a	ENSMUST00000173923.1	protein_coding	+
chr11_22907132_22908763	chr11	22907132	22908763	ENSMUSG00000049811.9	Fam161a	ENSMUST00000172602.1	protein_coding	+
chr11_22907132_22908763	chr11	22907132	22908763	ENSMUSG00000049811.9	Fam161a	ENSMUST00000109557.2	protein_coding	+
chr11_22920378_22920607	chr11	22920378	22920607	ENSMUSG00000049811.9	Fam161a	ENSMUST00000094363.3	protein_coding	+
chr11_22920378_22920607	chr11	22920378	22920607	ENSMUSG00000049811.9	Fam161a	ENSMUST00000151877.1	protein_coding	+
chr11_22963169_22963537	chr11	22963169	22963537	ENSMUSG00000088010.1	5S_rRNA	ENSMUST00000157385.1	rRNA	-
chr11_22967168_22968804	chr11	22967168	22968804	ENSMUSG00000085665.1	Gm12059	ENSMUST00000128996.1	processed_transcript	+
chr11_23072749_23073011	chr11	23072749	23073011	ENSMUSG00000088495.1	SNORA17	ENSMUST00000157870.1	snoRNA	-
chr11_23154943_23156492	chr11	23154943	23156492	ENSMUSG00000020290.8	Xpo1	ENSMUST00000020538.6	protein_coding	+
chr11_23154943_23156492	chr11	23154943	23156492	ENSMUSG00000020290.8	Xpo1	ENSMUST00000109551.1	protein_coding	+
chr11_23154943_23156492	chr11	23154943	23156492	ENSMUSG00000020290.8	Xpo1	ENSMUST00000102870.1	protein_coding	+
chr11_23154943_23156492	chr11	23154943	23156492	ENSMUSG00000020290.8	Xpo1	ENSMUST00000149371.1	processed_transcript	+
chr11_23154943_23156492	chr11	23154943	23156492	ENSMUSG00000020290.8	Xpo1	ENSMUST00000102869.1	protein_coding	+
chr11_23154943_23156492	chr11	23154943	23156492	ENSMUSG00000020290.8	Xpo1	ENSMUST00000136235.1	protein_coding	+
chr11_23156699_23157741	chr11	23156699	23157741	ENSMUSG00000020290.8	Xpo1	ENSMUST00000136235.1	protein_coding	+
chr11_23205384_23206747	chr11	23205384	23206747	ENSMUSG00000056342.9	Usp34	ENSMUST00000137823.1	protein_coding	+
chr11_23206822_23207660	chr11	23206822	23207660	ENSMUSG00000056342.9	Usp34	ENSMUST00000137823.1	protein_coding	+
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000086459.2	1700030C12Rik	ENSMUST00000125126.1	processed_transcript	+
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000086459.2	1700030C12Rik	ENSMUST00000144783.1	processed_transcript	+
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000086459.2	1700030C12Rik	ENSMUST00000101462.4	processed_transcript	+
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000086459.2	1700030C12Rik	ENSMUST00000133489.1	processed_transcript	+
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000020288.7	Ahsa2	ENSMUST00000128559.1	protein_coding	-
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000020288.7	Ahsa2	ENSMUST00000147157.1	protein_coding	-
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000020288.7	Ahsa2	ENSMUST00000128372.1	protein_coding	-
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000020288.7	Ahsa2	ENSMUST00000020529.6	protein_coding	-
chr11_23396711_23398752	chr11	23396711	23398752	ENSMUSG00000020288.7	Ahsa2	ENSMUST00000109539.1	protein_coding	-
chr11_23419172_23419897	chr11	23419172	23419897	ENSMUSG00000020286.6	1700093K21Rik	ENSMUST00000140122.1	protein_coding	-
chr11_23419172_23419897	chr11	23419172	23419897	ENSMUSG00000020286.6	1700093K21Rik	ENSMUST00000020527.5	protein_coding	-
chr11_23419172_23419897	chr11	23419172	23419897	ENSMUSG00000020286.6	1700093K21Rik	ENSMUST00000169264.1	protein_coding	-
chr11_23420017_23421136	chr11	23420017	23421136	ENSMUSG00000020286.6	1700093K21Rik	ENSMUST00000156629.1	protein_coding	-
chr11_23420017_23421136	chr11	23420017	23421136	ENSMUSG00000020286.6	1700093K21Rik	ENSMUST00000140122.1	protein_coding	-
chr11_23420017_23421136	chr11	23420017	23421136	ENSMUSG00000020286.6	1700093K21Rik	ENSMUST00000169264.1	protein_coding	-
chr11_23532868_23534475	chr11	23532868	23534475	ENSMUSG00000042208.8	0610010F05Rik	ENSMUST00000131612.1	protein_coding	-
chr11_23532868_23534475	chr11	23532868	23534475	ENSMUSG00000042208.8	0610010F05Rik	ENSMUST00000141353.1	protein_coding	-
chr11_23532868_23534475	chr11	23532868	23534475	ENSMUSG00000042208.8	0610010F05Rik	ENSMUST00000109532.2	protein_coding	-
chr11_23532868_23534475	chr11	23532868	23534475	ENSMUSG00000042208.8	0610010F05Rik	ENSMUST00000155903.1	nonsense_mediated_decay	-
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020280.6	Pus10	ENSMUST00000109525.1	protein_coding	+
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020280.6	Pus10	ENSMUST00000020520.4	protein_coding	+
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020280.6	Pus10	ENSMUST00000058163.4	protein_coding	+
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020280.6	Pus10	ENSMUST00000136365.1	retained_intron	+
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020280.6	Pus10	ENSMUST00000143117.1	protein_coding	+
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020283.5	Pex13	ENSMUST00000146533.1	processed_transcript	-
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020283.5	Pex13	ENSMUST00000124839.1	processed_transcript	-
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020283.5	Pex13	ENSMUST00000130811.1	nonsense_mediated_decay	-
chr11_23565183_23566866	chr11	23565183	23566866	ENSMUSG00000020283.5	Pex13	ENSMUST00000020523.3	protein_coding	-
chr11_23617615_23617946	chr11	23617615	23617946	ENSMUSG00000020280.6	Pus10	ENSMUST00000139646.1	retained_intron	+
chr11_23669585_23672041	chr11	23669585	23672041	ENSMUSG00000020275.8	Rel	ENSMUST00000102864.3	protein_coding	-
chr11_23794131_23795798	chr11	23794131	23795798	ENSMUSG00000084769.1	Gm12061	ENSMUST00000151881.1	antisense	+
chr11_23794131_23795798	chr11	23794131	23795798	ENSMUSG00000020273.7	Papolg	ENSMUST00000102863.2	protein_coding	-
chr11_23794131_23795798	chr11	23794131	23795798	ENSMUSG00000020273.7	Papolg	ENSMUST00000020513.3	protein_coding	-
chr11_23974712_23974912	chr11	23974712	23974912	ENSMUSG00000055010.1	A830031A19Rik	ENSMUST00000068360.1	protein_coding	-
chr11_23975960_23977690	chr11	23975960	23977690	ENSMUSG00000085167.1	Gm12063	ENSMUST00000148087.1	lincRNA	+
chr11_23977929_23978152	chr11	23977929	23978152	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000000881.6	protein_coding	+
chr11_23977929_23978152	chr11	23977929	23978152	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000109516.1	protein_coding	+
chr11_23977929_23978152	chr11	23977929	23978152	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000124148.1	retained_intron	+
chr11_23977929_23978152	chr11	23977929	23978152	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000109514.1	protein_coding	+
chr11_23980595_23981703	chr11	23980595	23981703	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000118955.1	protein_coding	+
chr11_24041416_24042278	chr11	24041416	24042278	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000127494.1	processed_transcript	+
chr11_24042336_24042766	chr11	24042336	24042766	ENSMUSG00000000861.9	Bcl11a	ENSMUST00000127494.1	processed_transcript	+
chr11_24072428_24072955	chr11	24072428	24072955	ENSMUSG00000085516.1	4930538E20Rik	ENSMUST00000146717.1	antisense	-
chr11_24072428_24072955	chr11	24072428	24072955	ENSMUSG00000085516.1	4930538E20Rik	ENSMUST00000131383.1	antisense	-
chr11_24579593_24580225	chr11	24579593	24580225	ENSMUSG00000080631.1	AL691457.1	ENSMUST00000116981.1	miRNA	-
chr11_24825965_24826287	chr11	24825965	24826287	ENSMUSG00000087145.1	Gm12665	ENSMUST00000126063.1	lincRNA	-
chr11_24825965_24826287	chr11	24825965	24826287	ENSMUSG00000087145.1	Gm12665	ENSMUST00000130092.1	lincRNA	-
chr11_25200421_25201723	chr11	25200421	25201723	ENSMUSG00000086439.1	Gm12069	ENSMUST00000145127.1	lincRNA	+
chr11_25226047_25226281	chr11	25226047	25226281	ENSMUSG00000033015.9	4933427E13Rik	ENSMUST00000125234.1	lincRNA	+
chr11_25226047_25226281	chr11	25226047	25226281	ENSMUSG00000033015.9	4933427E13Rik	ENSMUST00000125309.1	lincRNA	+
chr11_25584771_25585071	chr11	25584771	25585071	ENSMUSG00000064761.1	SNORA61	ENSMUST00000082827.1	snoRNA	+
chr11_26109514_26111231	chr11	26109514	26111231	ENSMUSG00000073101.3	5730522E02Rik	ENSMUST00000101447.3	protein_coding	-
chr11_26109514_26111231	chr11	26109514	26111231	ENSMUSG00000032985.8	5730522E02Rik	ENSMUST00000125987.1	processed_transcript	-
chr11_26109514_26111231	chr11	26109514	26111231	ENSMUSG00000032985.8	5730522E02Rik	ENSMUST00000125773.1	processed_transcript	-
chr11_26286714_26287832	chr11	26286714	26287832	ENSMUSG00000004018.3	Fancl	ENSMUST00000143471.1	processed_transcript	+
chr11_26286714_26287832	chr11	26286714	26287832	ENSMUSG00000004018.3	Fancl	ENSMUST00000109509.1	protein_coding	+
chr11_26286714_26287832	chr11	26286714	26287832	ENSMUSG00000004018.3	Fancl	ENSMUST00000136830.1	protein_coding	+
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000068314.4	Gm6899	ENSMUST00000089614.4	protein_coding	+
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000064090.7	Vrk2	ENSMUST00000125545.1	processed_transcript	-
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000064090.7	Vrk2	ENSMUST00000156264.1	protein_coding	-
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000064090.7	Vrk2	ENSMUST00000155728.1	retained_intron	-
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000064090.7	Vrk2	ENSMUST00000124294.1	retained_intron	-
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000064090.7	Vrk2	ENSMUST00000078362.6	protein_coding	-
chr11_26492462_26494146	chr11	26492462	26494146	ENSMUSG00000064090.7	Vrk2	ENSMUST00000109505.2	protein_coding	-
chr11_26985665_26987049	chr11	26985665	26987049	ENSMUSG00000088654.1	SNORA17	ENSMUST00000158029.1	snoRNA	-
chr11_27782924_27783339	chr11	27782924	27783339	ENSMUSG00000084064.1	Gm12079	ENSMUST00000112483.2	transcribed_processed_pseudogene	+
chr11_27946178_27946442	chr11	27946178	27946442	ENSMUSG00000083201.1	Gm12080	ENSMUST00000119821.1	transcribed_processed_pseudogene	+
chr11_28239428_28240145	chr11	28239428	28240145	ENSMUSG00000032889.5	Gm6685	ENSMUST00000042595.5	protein_coding	-
chr11_28476550_28477040	chr11	28476550	28477040	ENSMUSG00000032878.10	Ccdc85a	ENSMUST00000140601.2	protein_coding	-
chr11_28483128_28484731	chr11	28483128	28484731	ENSMUSG00000032878.10	Ccdc85a	ENSMUST00000109501.1	retained_intron	-
chr11_28483128_28484731	chr11	28483128	28484731	ENSMUSG00000032878.10	Ccdc85a	ENSMUST00000146385.2	protein_coding	-
chr11_28483128_28484731	chr11	28483128	28484731	ENSMUSG00000032878.10	Ccdc85a	ENSMUST00000042534.8	protein_coding	-
chr11_28483128_28484731	chr11	28483128	28484731	ENSMUSG00000032878.10	Ccdc85a	ENSMUST00000109502.2	protein_coding	-
chr11_28483128_28484731	chr11	28483128	28484731	ENSMUSG00000032878.10	Ccdc85a	ENSMUST00000093253.3	protein_coding	-
chr11_28752969_28754574	chr11	28752969	28754574	ENSMUSG00000020467.8	Efemp1	ENSMUST00000020759.5	protein_coding	+
chr11_28752969_28754574	chr11	28752969	28754574	ENSMUSG00000020467.8	Efemp1	ENSMUST00000093250.4	protein_coding	+
chr11_28752969_28754574	chr11	28752969	28754574	ENSMUSG00000020467.8	Efemp1	ENSMUST00000124103.1	processed_transcript	+
chr11_28856780_28857262	chr11	28856780	28857262	ENSMUSG00000081695.1	Rpsa-ps5	ENSMUST00000121462.1	transcribed_processed_pseudogene	+
chr11_29029932_29031491	chr11	29029932	29031491	ENSMUSG00000020464.9	Pnpt1	ENSMUST00000154924.1	processed_transcript	+
chr11_29029932_29031491	chr11	29029932	29031491	ENSMUSG00000020464.9	Pnpt1	ENSMUST00000020756.8	protein_coding	+
chr11_29029932_29031491	chr11	29029932	29031491	ENSMUSG00000020464.9	Pnpt1	ENSMUST00000148173.1	processed_transcript	+
chr11_29071872_29073720	chr11	29071872	29073720	ENSMUSG00000020463.8	Smek2	ENSMUST00000102856.2	protein_coding	+
chr11_29071872_29073720	chr11	29071872	29073720	ENSMUSG00000020463.8	Smek2	ENSMUST00000020755.5	protein_coding	+
chr11_29071872_29073720	chr11	29071872	29073720	ENSMUSG00000020463.8	Smek2	ENSMUST00000101439.3	protein_coding	+
chr11_29071872_29073720	chr11	29071872	29073720	ENSMUSG00000020463.8	Smek2	ENSMUST00000101438.3	protein_coding	+
chr11_29071872_29073720	chr11	29071872	29073720	ENSMUSG00000020463.8	Smek2	ENSMUST00000156280.1	protein_coding	+
chr11_29071872_29073720	chr11	29071872	29073720	ENSMUSG00000086725.1	A630052C17Rik	ENSMUST00000129876.1	processed_transcript	-
chr11_29146345_29148139	chr11	29146345	29148139	ENSMUSG00000020462.8	Ccdc104	ENSMUST00000144627.1	retained_intron	-
chr11_29146345_29148139	chr11	29146345	29148139	ENSMUSG00000020462.8	Ccdc104	ENSMUST00000134599.1	protein_coding	-
chr11_29146345_29148139	chr11	29146345	29148139	ENSMUSG00000020462.8	Ccdc104	ENSMUST00000127940.1	retained_intron	-
chr11_29146345_29148139	chr11	29146345	29148139	ENSMUSG00000020462.8	Ccdc104	ENSMUST00000141862.1	retained_intron	-
chr11_29146345_29148139	chr11	29146345	29148139	ENSMUSG00000020462.8	Ccdc104	ENSMUST00000020754.3	protein_coding	-
chr11_29273135_29274660	chr11	29273135	29274660	ENSMUSG00000032740.9	Ccdc88a	ENSMUST00000040182.6	protein_coding	+
chr11_29273135_29274660	chr11	29273135	29274660	ENSMUSG00000032740.9	Ccdc88a	ENSMUST00000169616.1	protein_coding	+
chr11_29273135_29274660	chr11	29273135	29274660	ENSMUSG00000032740.9	Ccdc88a	ENSMUST00000072471.5	protein_coding	+
chr11_29273135_29274660	chr11	29273135	29274660	ENSMUSG00000032740.9	Ccdc88a	ENSMUST00000101427.3	protein_coding	+
chr11_29273135_29274660	chr11	29273135	29274660	ENSMUSG00000032740.9	Ccdc88a	ENSMUST00000109477.1	protein_coding	+
chr11_29414144_29415626	chr11	29414144	29415626	ENSMUSG00000085165.1	Gm12089	ENSMUST00000138402.1	antisense	+
chr11_29414144_29415626	chr11	29414144	29415626	ENSMUSG00000032673.4	Prorsd1	ENSMUST00000041448.6	protein_coding	-
chr11_29414144_29415626	chr11	29414144	29415626	ENSMUSG00000032673.4	Prorsd1	ENSMUST00000039900.3	protein_coding	-
chr11_29414144_29415626	chr11	29414144	29415626	ENSMUSG00000032673.4	Prorsd1	ENSMUST00000133103.1	protein_coding	-
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000133452.1	protein_coding	+
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000136351.1	protein_coding	+
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000156352.1	processed_transcript	+
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000020749.6	protein_coding	+
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000144321.1	protein_coding	+
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000093239.4	protein_coding	+
chr11_29425767_29427355	chr11	29425767	29427355	ENSMUSG00000020459.7	Mtif2	ENSMUST00000101423.2	protein_coding	+
chr11_29432050_29433130	chr11	29432050	29433130	ENSMUSG00000020459.7	Mtif2	ENSMUST00000132783.1	protein_coding	+
chr11_29447322_29448883	chr11	29447322	29448883	ENSMUSG00000020461.3	1700034F02Rik	ENSMUST00000020753.3	protein_coding	+
chr11_29447322_29448883	chr11	29447322	29448883	ENSMUSG00000020460.9	Rps27a	ENSMUST00000143418.1	processed_transcript	-
chr11_29447322_29448883	chr11	29447322	29448883	ENSMUSG00000020460.9	Rps27a	ENSMUST00000150739.1	processed_transcript	-
chr11_29447322_29448883	chr11	29447322	29448883	ENSMUSG00000020460.9	Rps27a	ENSMUST00000102845.4	protein_coding	-
chr11_29447322_29448883	chr11	29447322	29448883	ENSMUSG00000020460.9	Rps27a	ENSMUST00000102844.3	protein_coding	-
chr11_29462557_29463822	chr11	29462557	29463822	ENSMUSG00000020461.3	1700034F02Rik	ENSMUST00000131366.1	processed_transcript	+
chr11_29462557_29463822	chr11	29462557	29463822	ENSMUSG00000020461.3	1700034F02Rik	ENSMUST00000123175.1	processed_transcript	+
chr11_29545088_29546092	chr11	29545088	29546092	ENSMUSG00000084850.1	Gm12092	ENSMUST00000125194.1	lincRNA	-
chr11_29592094_29594446	chr11	29592094	29594446	ENSMUSG00000020458.10	Rtn4	ENSMUST00000102843.3	protein_coding	+
chr11_29592094_29594446	chr11	29592094	29594446	ENSMUSG00000020458.10	Rtn4	ENSMUST00000102842.3	protein_coding	+
chr11_29592094_29594446	chr11	29592094	29594446	ENSMUSG00000020458.10	Rtn4	ENSMUST00000078830.4	protein_coding	+
chr11_29592094_29594446	chr11	29592094	29594446	ENSMUSG00000020458.10	Rtn4	ENSMUST00000170731.1	protein_coding	+
chr11_29592094_29594446	chr11	29592094	29594446	ENSMUSG00000020458.10	Rtn4	ENSMUST00000102841.1	protein_coding	+
chr11_29618333_29620129	chr11	29618333	29620129	ENSMUSG00000020458.10	Rtn4	ENSMUST00000060992.5	protein_coding	+
chr11_29633573_29633876	chr11	29633573	29633876	ENSMUSG00000020458.10	Rtn4	ENSMUST00000156217.1	processed_transcript	+
chr11_29633573_29633876	chr11	29633573	29633876	ENSMUSG00000020458.10	Rtn4	ENSMUST00000141719.1	processed_transcript	+
chr11_29649384_29649994	chr11	29649384	29649994	ENSMUSG00000044072.8	Eml6	ENSMUST00000137017.1	retained_intron	-
chr11_29708040_29710103	chr11	29708040	29710103	ENSMUSG00000080386.1	AL929371.1	ENSMUST00000116736.1	miRNA	-
chr11_29725287_29726380	chr11	29725287	29726380	ENSMUSG00000078157.1	4931440F15Rik	ENSMUST00000104962.1	protein_coding	-
chr11_29739608_29740325	chr11	29739608	29740325	ENSMUSG00000080851.1	Gm12094	ENSMUST00000121781.1	transcribed_processed_pseudogene	+
chr11_29740407_29741421	chr11	29740407	29741421	ENSMUSG00000080851.1	Gm12094	ENSMUST00000121781.1	transcribed_processed_pseudogene	+
chr11_29925578_29926690	chr11	29925578	29926690	ENSMUSG00000044072.8	Eml6	ENSMUST00000058902.5	protein_coding	-
chr11_30002290_30003240	chr11	30002290	30003240	ENSMUSG00000020315.11	Spnb2	ENSMUST00000145315.1	retained_intron	-
chr11_30026629_30027402	chr11	30026629	30027402	ENSMUSG00000090842.1	Gm17674	ENSMUST00000165468.1	protein_coding	+
chr11_30097403_30098920	chr11	30097403	30098920	ENSMUSG00000020315.11	Spnb2	ENSMUST00000039018.8	protein_coding	-
chr11_30097403_30098920	chr11	30097403	30098920	ENSMUSG00000020315.11	Spnb2	ENSMUST00000102838.3	protein_coding	-
chr11_30166726_30169279	chr11	30166726	30169279	ENSMUSG00000073073.4	Gm8098	ENSMUST00000146985.1	processed_transcript	+
chr11_30166726_30169279	chr11	30166726	30169279	ENSMUSG00000020315.11	Spnb2	ENSMUST00000149117.1	retained_intron	-
chr11_30166726_30169279	chr11	30166726	30169279	ENSMUSG00000020315.11	Spnb2	ENSMUST00000124231.1	protein_coding	-
chr11_30166726_30169279	chr11	30166726	30169279	ENSMUSG00000020315.11	Spnb2	ENSMUST00000006629.7	protein_coding	-
chr11_30371148_30372898	chr11	30371148	30372898	ENSMUSG00000040919.7	4930505A04Rik	ENSMUST00000041763.7	protein_coding	-
chr11_30371148_30372898	chr11	30371148	30372898	ENSMUSG00000040919.7	4930505A04Rik	ENSMUST00000152718.1	nonsense_mediated_decay	-
chr11_30548490_30549990	chr11	30548490	30549990	ENSMUSG00000060923.5	Acyp2	ENSMUST00000074613.3	protein_coding	-
chr11_30605278_30605881	chr11	30605278	30605881	ENSMUSG00000083655.1	Gm12099	ENSMUST00000118660.1	transcribed_processed_pseudogene	-
chr11_30654612_30656013	chr11	30654612	30656013	ENSMUSG00000083990.1	Gm12101	ENSMUST00000121590.1	transcribed_processed_pseudogene	-
chr11_30671190_30673385	chr11	30671190	30673385	ENSMUSG00000040850.10	Psme4	ENSMUST00000041231.7	protein_coding	+
chr11_30671190_30673385	chr11	30671190	30673385	ENSMUSG00000040850.10	Psme4	ENSMUST00000154757.1	protein_coding	+
chr11_30784743_30786087	chr11	30784743	30786087	ENSMUSG00000043999.5	Gpr75	ENSMUST00000109430.1	protein_coding	+
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020305.7	Asb3	ENSMUST00000020551.6	protein_coding	+
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020305.7	Asb3	ENSMUST00000137306.1	nonsense_mediated_decay	+
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020305.7	Asb3	ENSMUST00000117883.1	protein_coding	+
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020305.7	Asb3	ENSMUST00000148163.1	retained_intron	+
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020311.10	Erlec1	ENSMUST00000152770.1	processed_transcript	-
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020311.10	Erlec1	ENSMUST00000073192.7	protein_coding	-
chr11_30852915_30855092	chr11	30852915	30855092	ENSMUSG00000020311.10	Erlec1	ENSMUST00000170746.1	protein_coding	-
chr11_30885166_30887273	chr11	30885166	30887273	ENSMUSG00000020309.6	Chac2	ENSMUST00000020553.4	protein_coding	-
chr11_30885166_30887273	chr11	30885166	30887273	ENSMUSG00000020309.6	Chac2	ENSMUST00000101394.4	protein_coding	-
chr11_31268499_31270335	chr11	31268499	31270335	ENSMUSG00000020303.2	Stc2	ENSMUST00000134199.1	processed_transcript	-
chr11_31268499_31270335	chr11	31268499	31270335	ENSMUSG00000020303.2	Stc2	ENSMUST00000152094.1	processed_transcript	-
chr11_31268499_31270335	chr11	31268499	31270335	ENSMUSG00000020303.2	Stc2	ENSMUST00000139991.1	processed_transcript	-
chr11_31268499_31270335	chr11	31268499	31270335	ENSMUSG00000020303.2	Stc2	ENSMUST00000020546.2	protein_coding	-
chr11_31571357_31572496	chr11	31571357	31572496	ENSMUSG00000044502.9	Bod1	ENSMUST00000109415.1	protein_coding	-
chr11_31571357_31572496	chr11	31571357	31572496	ENSMUSG00000044502.9	Bod1	ENSMUST00000109417.3	protein_coding	-
chr11_31571357_31572496	chr11	31571357	31572496	ENSMUSG00000044502.9	Bod1	ENSMUST00000058060.7	protein_coding	-
chr11_31724356_31725463	chr11	31724356	31725463	ENSMUSG00000085772.1	D630024D03Rik	ENSMUST00000126265.1	lincRNA	-
chr11_31724356_31725463	chr11	31724356	31725463	ENSMUSG00000085772.1	D630024D03Rik	ENSMUST00000134944.1	lincRNA	-
chr11_31724356_31725463	chr11	31724356	31725463	ENSMUSG00000085772.1	D630024D03Rik	ENSMUST00000129425.1	lincRNA	-
chr11_31730276_31732875	chr11	31730276	31732875	ENSMUSG00000086335.1	Gm12107	ENSMUST00000132857.1	lincRNA	+
chr11_31772309_31772509	chr11	31772309	31772509	ENSMUSG00000020300.7	Cpeb4	ENSMUST00000020543.6	protein_coding	+
chr11_31772309_31772509	chr11	31772309	31772509	ENSMUSG00000020300.7	Cpeb4	ENSMUST00000109413.2	protein_coding	+
chr11_31772309_31772509	chr11	31772309	31772509	ENSMUSG00000020300.7	Cpeb4	ENSMUST00000093220.3	protein_coding	+
chr11_31772309_31772509	chr11	31772309	31772509	ENSMUSG00000020300.7	Cpeb4	ENSMUST00000109412.2	protein_coding	+
chr11_31772611_31773474	chr11	31772611	31773474	ENSMUSG00000020300.7	Cpeb4	ENSMUST00000155278.1	protein_coding	+
chr11_31816771_31817444	chr11	31816771	31817444	ENSMUSG00000020300.7	Cpeb4	ENSMUST00000163611.1	protein_coding	+
chr11_31865332_31866212	chr11	31865332	31866212	ENSMUSG00000020299.6	4930524B15Rik	ENSMUST00000102829.3	protein_coding	+
chr11_31899406_31900791	chr11	31899406	31900791	ENSMUSG00000020297.4	Nsg2	ENSMUST00000020537.2	protein_coding	+
chr11_31899406_31900791	chr11	31899406	31900791	ENSMUSG00000020297.4	Nsg2	ENSMUST00000109409.1	protein_coding	+
chr11_31899406_31900791	chr11	31899406	31900791	ENSMUSG00000020297.4	Nsg2	ENSMUST00000093219.3	protein_coding	+
chr11_32000850_32001577	chr11	32000850	32001577	ENSMUSG00000086386.1	Gm12108	ENSMUST00000145338.1	lincRNA	-
chr11_32099988_32100690	chr11	32099988	32100690	ENSMUSG00000020279.4	Il9r	ENSMUST00000131979.1	retained_intron	-
chr11_32099988_32100690	chr11	32099988	32100690	ENSMUSG00000020279.4	Il9r	ENSMUST00000142396.1	protein_coding	-
chr11_32099988_32100690	chr11	32099988	32100690	ENSMUSG00000020279.4	Il9r	ENSMUST00000128311.1	protein_coding	-
chr11_32099988_32100690	chr11	32099988	32100690	ENSMUSG00000020279.4	Il9r	ENSMUST00000020518.4	nonsense_mediated_decay	-
chr11_32099988_32100690	chr11	32099988	32100690	ENSMUSG00000020279.4	Il9r	ENSMUST00000145401.1	protein_coding	-
chr11_32104796_32105974	chr11	32104796	32105974	ENSMUSG00000040767.4	Snrnp25	ENSMUST00000039601.3	protein_coding	+
chr11_32104796_32105974	chr11	32104796	32105974	ENSMUSG00000040767.4	Snrnp25	ENSMUST00000149043.1	protein_coding	+
chr11_32104796_32105974	chr11	32104796	32105974	ENSMUSG00000040767.4	Snrnp25	ENSMUST00000155736.1	processed_transcript	+
chr11_32104796_32105974	chr11	32104796	32105974	ENSMUSG00000040767.4	Snrnp25	ENSMUST00000121182.1	protein_coding	+
chr11_32116682_32117596	chr11	32116682	32117596	ENSMUSG00000020282.12	Rhbdf1	ENSMUST00000143036.1	retained_intron	-
chr11_32120798_32122455	chr11	32120798	32122455	ENSMUSG00000020282.12	Rhbdf1	ENSMUST00000144902.1	protein_coding	-
chr11_32120798_32122455	chr11	32120798	32122455	ENSMUSG00000020282.12	Rhbdf1	ENSMUST00000150381.1	protein_coding	-
chr11_32120798_32122455	chr11	32120798	32122455	ENSMUSG00000020282.12	Rhbdf1	ENSMUST00000132578.1	nonsense_mediated_decay	-
chr11_32120798_32122455	chr11	32120798	32122455	ENSMUSG00000020282.12	Rhbdf1	ENSMUST00000146179.1	nonsense_mediated_decay	-
chr11_32120798_32122455	chr11	32120798	32122455	ENSMUSG00000020282.12	Rhbdf1	ENSMUST00000020524.8	protein_coding	-
chr11_32126133_32127405	chr11	32126133	32127405	ENSMUSG00000020287.9	Mpg	ENSMUST00000142964.1	nonsense_mediated_decay	+
chr11_32126133_32127405	chr11	32126133	32127405	ENSMUSG00000020287.9	Mpg	ENSMUST00000020528.7	protein_coding	+
chr11_32126133_32127405	chr11	32126133	32127405	ENSMUSG00000020287.9	Mpg	ENSMUST00000144903.1	retained_intron	+
chr11_32126133_32127405	chr11	32126133	32127405	ENSMUSG00000020287.9	Mpg	ENSMUST00000138050.1	nonsense_mediated_decay	+
chr11_32134009_32134270	chr11	32134009	32134270	ENSMUSG00000020289.8	Nprl3	ENSMUST00000148636.1	retained_intron	-
chr11_32137817_32138991	chr11	32137817	32138991	ENSMUSG00000020289.8	Nprl3	ENSMUST00000129573.1	retained_intron	-
chr11_32156039_32156835	chr11	32156039	32156835	ENSMUSG00000020289.8	Nprl3	ENSMUST00000109390.1	processed_transcript	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000132856.1	processed_transcript	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000129010.1	protein_coding	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000149526.1	nonsense_mediated_decay	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000109389.2	protein_coding	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000137950.1	nonsense_mediated_decay	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000093212.4	protein_coding	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000136903.1	nonsense_mediated_decay	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000020530.5	protein_coding	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000141859.1	nonsense_mediated_decay	-
chr11_32166759_32168333	chr11	32166759	32168333	ENSMUSG00000020289.8	Nprl3	ENSMUST00000124640.1	nonsense_mediated_decay	-
chr11_32186420_32187268	chr11	32186420	32187268	ENSMUSG00000073063.3	Hbq1b	ENSMUST00000101387.3	protein_coding	+
chr11_32186420_32187268	chr11	32186420	32187268	ENSMUSG00000073063.3	Hbq1b	ENSMUST00000151724.1	retained_intron	+
chr11_32199756_32200369	chr11	32199756	32200369	ENSMUSG00000020295.1	Hbq1a	ENSMUST00000020535.1	protein_coding	+
chr11_32247273_32248650	chr11	32247273	32248650	ENSMUSG00000040711.7	Sh3pxd2b	ENSMUST00000038753.5	protein_coding	+
chr11_32247273_32248650	chr11	32247273	32248650	ENSMUSG00000040711.7	Sh3pxd2b	ENSMUST00000138771.1	retained_intron	+
chr11_32354413_32356238	chr11	32354413	32356238	ENSMUSG00000044949.4	Ubtd2	ENSMUST00000051053.4	protein_coding	+
chr11_32432012_32434392	chr11	32432012	32434392	ENSMUSG00000020272.8	Stk10	ENSMUST00000102821.3	protein_coding	+
chr11_32432012_32434392	chr11	32432012	32434392	ENSMUSG00000044056.3	Efcab9	ENSMUST00000109377.1	protein_coding	-
chr11_32487284_32489108	chr11	32487284	32489108	ENSMUSG00000020272.8	Stk10	ENSMUST00000143397.1	retained_intron	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000109366.1	protein_coding	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000082313.6	protein_coding	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000137898.1	processed_transcript	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000093205.6	protein_coding	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000076383.7	protein_coding	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000170906.1	protein_coding	+
chr11_32541717_32543536	chr11	32541717	32543536	ENSMUSG00000020271.10	Fbxw11	ENSMUST00000143290.1	nonsense_mediated_decay	+
chr11_32724486_32724695	chr11	32724486	32724695	ENSMUSG00000020270.3	1700008A04Rik	ENSMUST00000020508.2	protein_coding	-
chr11_32724486_32724695	chr11	32724486	32724695	ENSMUSG00000020270.3	1700008A04Rik	ENSMUST00000109365.1	protein_coding	-
chr11_32825440_32826129	chr11	32825440	32826129	ENSMUSG00000085402.1	Gm12111	ENSMUST00000150073.1	lincRNA	-
chr11_33046145_33048940	chr11	33046145	33048940	ENSMUSG00000057967.6	Fgf18	ENSMUST00000109363.1	protein_coding	-
chr11_33046145_33048940	chr11	33046145	33048940	ENSMUSG00000057967.6	Fgf18	ENSMUST00000020507.7	protein_coding	-
chr11_33062029_33063827	chr11	33062029	33063827	ENSMUSG00000057113.7	Npm1	ENSMUST00000101375.4	protein_coding	-
chr11_33062029_33063827	chr11	33062029	33063827	ENSMUSG00000057113.7	Npm1	ENSMUST00000109354.3	protein_coding	-
chr11_33062029_33063827	chr11	33062029	33063827	ENSMUSG00000057113.7	Npm1	ENSMUST00000093201.6	protein_coding	-
chr11_33062029_33063827	chr11	33062029	33063827	ENSMUSG00000057113.7	Npm1	ENSMUST00000075641.3	protein_coding	-
chr11_33103492_33104215	chr11	33103492	33104215	ENSMUSG00000087501.1	Gm12116	ENSMUST00000131851.1	antisense	+
chr11_33103492_33104215	chr11	33103492	33104215	ENSMUSG00000040610.6	Tlx3	ENSMUST00000037746.6	protein_coding	-
chr11_33230061_33230298	chr11	33230061	33230298	ENSMUSG00000040594.11	Ranbp17	ENSMUST00000154808.1	processed_transcript	-
chr11_33412597_33414413	chr11	33412597	33414413	ENSMUSG00000040594.11	Ranbp17	ENSMUST00000147751.1	protein_coding	-
chr11_33412597_33414413	chr11	33412597	33414413	ENSMUSG00000040594.11	Ranbp17	ENSMUST00000037522.7	protein_coding	-
chr11_33412597_33414413	chr11	33412597	33414413	ENSMUSG00000040594.11	Ranbp17	ENSMUST00000129179.1	nonsense_mediated_decay	-
chr11_33412597_33414413	chr11	33412597	33414413	ENSMUSG00000040594.11	Ranbp17	ENSMUST00000102815.3	protein_coding	-
chr11_33412597_33414413	chr11	33412597	33414413	ENSMUSG00000040594.11	Ranbp17	ENSMUST00000169831.1	protein_coding	-
chr11_33742645_33743308	chr11	33742645	33743308	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000101368.2	protein_coding	-
chr11_33743319_33743814	chr11	33743319	33743814	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000109340.2	protein_coding	-
chr11_33743319_33743814	chr11	33743319	33743814	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000065970.5	protein_coding	-
chr11_33743319_33743814	chr11	33743319	33743814	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000166204.1	protein_coding	-
chr11_33743319_33743814	chr11	33743319	33743814	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000101368.2	protein_coding	-
chr11_33862784_33862990	chr11	33862784	33862990	ENSMUSG00000020155.2	Kcnmb1	ENSMUST00000020362.2	protein_coding	+
chr11_33863059_33863353	chr11	33863059	33863353	ENSMUSG00000020155.2	Kcnmb1	ENSMUST00000020362.2	protein_coding	+
chr11_33892930_33893357	chr11	33892930	33893357	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000135034.1	processed_transcript	-
chr11_33892930_33893357	chr11	33892930	33893357	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000154760.1	processed_transcript	-
chr11_33892930_33893357	chr11	33892930	33893357	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000109341.1	protein_coding	-
chr11_33892930_33893357	chr11	33892930	33893357	ENSMUSG00000053519.8	Kcnip1	ENSMUST00000093194.3	protein_coding	-
chr11_33946890_33947991	chr11	33946890	33947991	ENSMUSG00000002699.5	Lcp2	ENSMUST00000052413.4	protein_coding	+
chr11_33946890_33947991	chr11	33946890	33947991	ENSMUSG00000002699.5	Lcp2	ENSMUST00000169878.1	protein_coding	+
chr11_33946890_33947991	chr11	33946890	33947991	ENSMUSG00000002699.5	Lcp2	ENSMUST00000109329.1	protein_coding	+
chr11_33977646_33979028	chr11	33977646	33979028	ENSMUSG00000002699.5	Lcp2	ENSMUST00000133120.1	processed_transcript	+
chr11_33987160_33987411	chr11	33987160	33987411	ENSMUSG00000002699.5	Lcp2	ENSMUST00000146318.1	processed_transcript	+
chr11_33998101_33998871	chr11	33998101	33998871	ENSMUSG00000085684.1	4930469K13Rik	ENSMUST00000141450.1	processed_transcript	-
chr11_34041766_34042214	chr11	34041766	34042214	ENSMUSG00000086243.1	Gm12121	ENSMUST00000131630.1	lincRNA	+
chr11_34107917_34108281	chr11	34107917	34108281	ENSMUSG00000047861.2	Foxi1	ENSMUST00000060271.2	protein_coding	-
chr11_34199628_34199851	chr11	34199628	34199851	ENSMUSG00000087122.1	4930403D09Rik	ENSMUST00000147359.1	antisense	+
chr11_34214420_34215282	chr11	34214420	34215282	ENSMUSG00000069911.4	Fam196b	ENSMUST00000165963.1	protein_coding	+
chr11_34214420_34215282	chr11	34214420	34215282	ENSMUSG00000069911.4	Fam196b	ENSMUST00000093192.3	protein_coding	+
chr11_34595910_34598031	chr11	34595910	34598031	ENSMUSG00000020143.9	Dock2	ENSMUST00000143540.1	nonsense_mediated_decay	-
chr11_34595910_34598031	chr11	34595910	34598031	ENSMUSG00000020143.9	Dock2	ENSMUST00000154178.1	retained_intron	-
chr11_34595910_34598031	chr11	34595910	34598031	ENSMUSG00000020143.9	Dock2	ENSMUST00000101365.2	protein_coding	-
chr11_34595910_34598031	chr11	34595910	34598031	ENSMUSG00000020143.9	Dock2	ENSMUST00000093193.5	protein_coding	-
chr11_34646729_34648071	chr11	34646729	34648071	ENSMUSG00000069910.2	Ccdc99	ENSMUST00000148387.1	retained_intron	-
chr11_34646729_34648071	chr11	34646729	34648071	ENSMUSG00000069910.2	Ccdc99	ENSMUST00000093191.2	protein_coding	-
chr11_34934312_34935235	chr11	34934312	34935235	ENSMUSG00000056427.4	Slit3	ENSMUST00000069837.3	protein_coding	+
chr11_34984825_34985521	chr11	34984825	34985521	ENSMUSG00000056427.4	Slit3	ENSMUST00000156571.1	processed_transcript	+
chr11_34990736_34991122	chr11	34990736	34991122	ENSMUSG00000056427.4	Slit3	ENSMUST00000153098.1	processed_transcript	+
chr11_34991176_34991444	chr11	34991176	34991444	ENSMUSG00000056427.4	Slit3	ENSMUST00000153098.1	processed_transcript	+
chr11_35357724_35358798	chr11	35357724	35358798	ENSMUSG00000056427.4	Slit3	ENSMUST00000124438.1	processed_transcript	+
chr11_35582507_35583992	chr11	35582507	35583992	ENSMUSG00000018846.8	Pank3	ENSMUST00000018990.7	protein_coding	+
chr11_35605819_35606167	chr11	35605819	35606167	ENSMUSG00000082688.1	Gm12124	ENSMUST00000120504.1	transcribed_processed_pseudogene	+
chr11_35611103_35612730	chr11	35611103	35612730	ENSMUSG00000051062.5	Fbll1	ENSMUST00000160726.2	protein_coding	-
chr11_35647412_35648428	chr11	35647412	35648428	ENSMUSG00000018848.4	Rars	ENSMUST00000137815.1	processed_transcript	-
chr11_35647412_35648428	chr11	35647412	35648428	ENSMUSG00000018848.4	Rars	ENSMUST00000018992.3	protein_coding	-
chr11_35667225_35667425	chr11	35667225	35667425	ENSMUSG00000018849.6	Wwc1	ENSMUST00000131001.1	processed_transcript	-
chr11_35792755_35794642	chr11	35792755	35794642	ENSMUSG00000018849.6	Wwc1	ENSMUST00000018993.6	protein_coding	-
chr11_35894144_35894810	chr11	35894144	35894810	ENSMUSG00000087245.1	Gm12126	ENSMUST00000147717.1	antisense	+
chr11_36308368_36309699	chr11	36308368	36309699	ENSMUSG00000049336.9	Odz2	ENSMUST00000155147.1	processed_transcript	-
chr11_36489969_36492060	chr11	36489969	36492060	ENSMUSG00000049336.9	Odz2	ENSMUST00000149787.1	processed_transcript	-
chr11_36535939_36536321	chr11	36535939	36536321	ENSMUSG00000065173.1	U6	ENSMUST00000083239.1	snRNA	+
chr11_37048428_37051315	chr11	37048428	37051315	ENSMUSG00000049336.9	Odz2	ENSMUST00000157030.1	processed_transcript	-
chr11_37048428_37051315	chr11	37048428	37051315	ENSMUSG00000049336.9	Odz2	ENSMUST00000102801.1	protein_coding	-
chr11_37472190_37472510	chr11	37472190	37472510	ENSMUSG00000087388.1	Gm12128	ENSMUST00000131013.1	lincRNA	+
chr11_39541370_39542276	chr11	39541370	39542276	ENSMUSG00000083806.1	Gm12131	ENSMUST00000117479.1	transcribed_processed_pseudogene	-
chr11_40505482_40507366	chr11	40505482	40507366	ENSMUSG00000088256.1	snoMe28S-Cm3227	ENSMUST00000157631.1	snoRNA	-
chr11_40505482_40507366	chr11	40505482	40507366	ENSMUSG00000042032.7	Mat2b	ENSMUST00000109307.1	retained_intron	-
chr11_40505482_40507366	chr11	40505482	40507366	ENSMUSG00000042032.7	Mat2b	ENSMUST00000141830.1	nonsense_mediated_decay	-
chr11_40505482_40507366	chr11	40505482	40507366	ENSMUSG00000042032.7	Mat2b	ENSMUST00000040167.4	protein_coding	-
chr11_40507714_40508829	chr11	40507714	40508829	ENSMUSG00000042032.7	Mat2b	ENSMUST00000135617.1	retained_intron	-
chr11_40507714_40508829	chr11	40507714	40508829	ENSMUSG00000042032.7	Mat2b	ENSMUST00000101347.3	protein_coding	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020328.4	Nudcd2	ENSMUST00000020578.4	protein_coding	+
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020328.4	Nudcd2	ENSMUST00000127057.1	processed_transcript	+
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020328.4	Nudcd2	ENSMUST00000127382.1	protein_coding	+
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020328.4	Nudcd2	ENSMUST00000141839.1	processed_transcript	+
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000152749.1	processed_transcript	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000127705.1	processed_transcript	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000156399.1	processed_transcript	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000020579.7	protein_coding	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000125011.1	nonsense_mediated_decay	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000109303.2	protein_coding	-
chr11_40546586_40548063	chr11	40546586	40548063	ENSMUSG00000020330.8	Hmmr	ENSMUST00000109302.2	protein_coding	-
chr11_40567119_40569733	chr11	40567119	40569733	ENSMUSG00000020326.7	Ccng1	ENSMUST00000151359.1	processed_transcript	-
chr11_40567119_40569733	chr11	40567119	40569733	ENSMUSG00000020326.7	Ccng1	ENSMUST00000020576.7	protein_coding	-
chr11_41776009_41777382	chr11	41776009	41777382	ENSMUSG00000087306.1	A230004M16Rik	ENSMUST00000139508.1	processed_transcript	+
chr11_41812541_41814711	chr11	41812541	41814711	ENSMUSG00000020436.9	Gabrg2	ENSMUST00000109290.1	protein_coding	-
chr11_41812541_41814711	chr11	41812541	41814711	ENSMUSG00000020436.9	Gabrg2	ENSMUST00000070735.2	protein_coding	-
chr11_41812541_41814711	chr11	41812541	41814711	ENSMUSG00000020436.9	Gabrg2	ENSMUST00000070725.4	protein_coding	-
chr11_41812541_41814711	chr11	41812541	41814711	ENSMUSG00000020436.9	Gabrg2	ENSMUST00000163704.1	protein_coding	-
chr11_41812541_41814711	chr11	41812541	41814711	ENSMUSG00000020436.9	Gabrg2	ENSMUST00000109292.2	protein_coding	-
chr11_41994860_41997098	chr11	41994860	41997098	ENSMUSG00000010803.6	Gabra1	ENSMUST00000169305.1	processed_transcript	-
chr11_41994860_41997098	chr11	41994860	41997098	ENSMUSG00000010803.6	Gabra1	ENSMUST00000132971.1	protein_coding	-
chr11_41994860_41997098	chr11	41994860	41997098	ENSMUSG00000010803.6	Gabra1	ENSMUST00000153147.1	protein_coding	-
chr11_41994860_41997098	chr11	41994860	41997098	ENSMUSG00000010803.6	Gabra1	ENSMUST00000020707.5	protein_coding	-
chr11_42134152_42134844	chr11	42134152	42134844	ENSMUSG00000020428.7	Gabra6	ENSMUST00000109286.3	protein_coding	-
chr11_42134152_42134844	chr11	42134152	42134844	ENSMUSG00000020428.7	Gabra6	ENSMUST00000155218.2	protein_coding	-
chr11_42134152_42134844	chr11	42134152	42134844	ENSMUSG00000020428.7	Gabra6	ENSMUST00000020703.6	protein_coding	-
chr11_42232889_42235677	chr11	42232889	42235677	ENSMUSG00000007653.5	Gabrb2	ENSMUST00000007797.4	protein_coding	+
chr11_42232889_42235677	chr11	42232889	42235677	ENSMUSG00000007653.5	Gabrb2	ENSMUST00000169077.1	protein_coding	+
chr11_42232889_42235677	chr11	42232889	42235677	ENSMUSG00000007653.5	Gabrb2	ENSMUST00000140463.1	processed_transcript	+
chr11_42232889_42235677	chr11	42232889	42235677	ENSMUSG00000007653.5	Gabrb2	ENSMUST00000136050.1	processed_transcript	+
chr11_42232889_42235677	chr11	42232889	42235677	ENSMUSG00000007653.5	Gabrb2	ENSMUST00000143626.1	processed_transcript	+
chr11_42963085_42963573	chr11	42963085	42963573	ENSMUSG00000055415.6	Atp10b	ENSMUST00000148911.1	processed_transcript	+
chr11_42968905_42969321	chr11	42968905	42969321	ENSMUSG00000055415.6	Atp10b	ENSMUST00000137991.1	processed_transcript	+
chr11_43045644_43046022	chr11	43045644	43046022	ENSMUSG00000086170.1	Gm12144	ENSMUST00000136288.1	antisense	-
chr11_43198513_43199630	chr11	43198513	43199630	ENSMUSG00000084889.1	Gm12148	ENSMUST00000153791.1	lincRNA	+
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000148130.1	retained_intron	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000150726.1	processed_transcript	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000020685.9	protein_coding	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000152115.1	nonsense_mediated_decay	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000121638.1	protein_coding	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000118368.1	protein_coding	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000101340.4	protein_coding	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000117446.1	protein_coding	-
chr11_43238948_43240726	chr11	43238948	43240726	ENSMUSG00000020415.10	Pttg1	ENSMUST00000020687.8	protein_coding	-
chr11_43246622_43247902	chr11	43246622	43247902	ENSMUSG00000020409.3	Slu7	ENSMUST00000126128.1	protein_coding	+
chr11_43246622_43247902	chr11	43246622	43247902	ENSMUSG00000020409.3	Slu7	ENSMUST00000151880.1	protein_coding	+
chr11_43246622_43247902	chr11	43246622	43247902	ENSMUSG00000020409.3	Slu7	ENSMUST00000020681.3	protein_coding	+
chr11_43254652_43255018	chr11	43254652	43255018	ENSMUSG00000020409.3	Slu7	ENSMUST00000136541.1	processed_transcript	+
chr11_43287074_43288345	chr11	43287074	43288345	ENSMUSG00000046491.4	C1qtnf2	ENSMUST00000173002.1	protein_coding	+
chr11_43287074_43288345	chr11	43287074	43288345	ENSMUSG00000046491.4	C1qtnf2	ENSMUST00000057679.3	protein_coding	+
chr11_43341527_43343260	chr11	43341527	43343260	ENSMUSG00000044707.7	Ccnjl	ENSMUST00000050574.6	protein_coding	+
chr11_43341527_43343260	chr11	43341527	43343260	ENSMUSG00000044707.7	Ccnjl	ENSMUST00000152153.1	processed_transcript	+
chr11_43398554_43400378	chr11	43398554	43400378	ENSMUSG00000045877.2	4933415A04Rik	ENSMUST00000056256.2	protein_coding	+
chr11_43494736_43496425	chr11	43494736	43496425	ENSMUSG00000044950.7	Pwwp2a	ENSMUST00000061070.5	protein_coding	+
chr11_43494736_43496425	chr11	43494736	43496425	ENSMUSG00000044950.7	Pwwp2a	ENSMUST00000094294.4	protein_coding	+
chr11_43494736_43496425	chr11	43494736	43496425	ENSMUSG00000044950.7	Pwwp2a	ENSMUST00000148461.1	processed_transcript	+
chr11_43560846_43562119	chr11	43560846	43562119	ENSMUSG00000041278.4	Ttc1	ENSMUST00000147984.1	processed_transcript	-
chr11_43560846_43562119	chr11	43560846	43562119	ENSMUSG00000041278.4	Ttc1	ENSMUST00000048578.2	protein_coding	-
chr11_43560846_43562119	chr11	43560846	43562119	ENSMUSG00000041278.4	Ttc1	ENSMUST00000109278.1	protein_coding	-
chr11_43648971_43650397	chr11	43648971	43650397	ENSMUSG00000050541.8	Adra1b	ENSMUST00000124306.1	processed_transcript	-
chr11_43648971_43650397	chr11	43648971	43650397	ENSMUSG00000050541.8	Adra1b	ENSMUST00000167574.1	protein_coding	-
chr11_43714214_43715139	chr11	43714214	43715139	ENSMUSG00000050541.8	Adra1b	ENSMUST00000139906.1	protein_coding	-
chr11_43714214_43715139	chr11	43714214	43715139	ENSMUSG00000050541.8	Adra1b	ENSMUST00000067258.2	protein_coding	-
chr11_43771536_43772797	chr11	43771536	43772797	ENSMUSG00000087172.1	Gm12153	ENSMUST00000148504.1	lincRNA	+
chr11_44213282_44213719	chr11	44213282	44213719	ENSMUSG00000004296.8	Il12b	ENSMUST00000102796.3	protein_coding	+
chr11_44213282_44213719	chr11	44213282	44213719	ENSMUSG00000004296.8	Il12b	ENSMUST00000170513.1	protein_coding	+
chr11_44231014_44231528	chr11	44231014	44231528	ENSMUSG00000083521.1	Gm12157	ENSMUST00000121740.1	transcribed_processed_pseudogene	+
chr11_44275009_44275465	chr11	44275009	44275465	ENSMUSG00000041231.9	Ublcp1	ENSMUST00000156551.1	processed_transcript	-
chr11_44283051_44285075	chr11	44283051	44285075	ENSMUSG00000041231.9	Ublcp1	ENSMUST00000102795.3	protein_coding	-
chr11_44331673_44334374	chr11	44331673	44334374	ENSMUSG00000019189.7	Rnf145	ENSMUST00000019333.3	protein_coding	+
chr11_44331673_44334374	chr11	44331673	44334374	ENSMUSG00000019189.7	Rnf145	ENSMUST00000127907.1	processed_transcript	+
chr11_44331673_44334374	chr11	44331673	44334374	ENSMUSG00000019189.7	Rnf145	ENSMUST00000101327.2	protein_coding	+
chr11_44331673_44334374	chr11	44331673	44334374	ENSMUSG00000019189.7	Rnf145	ENSMUST00000124959.1	processed_transcript	+
chr11_44370476_44370931	chr11	44370476	44370931	ENSMUSG00000019189.7	Rnf145	ENSMUST00000150257.1	processed_transcript	+
chr11_44399591_44400195	chr11	44399591	44400195	ENSMUSG00000086501.1	4930597A21Rik	ENSMUST00000128652.1	lincRNA	+
chr11_44430315_44431117	chr11	44430315	44431117	ENSMUSG00000057098.7	Ebf1	ENSMUST00000081265.5	protein_coding	+
chr11_44430315_44431117	chr11	44430315	44431117	ENSMUSG00000057098.7	Ebf1	ENSMUST00000101326.3	protein_coding	+
chr11_44430315_44431117	chr11	44430315	44431117	ENSMUSG00000057098.7	Ebf1	ENSMUST00000109268.1	protein_coding	+
chr11_44430315_44431117	chr11	44430315	44431117	ENSMUSG00000078561.3	Ebf1	ENSMUST00000106085.3	pseudogene	+
chr11_44431610_44432249	chr11	44431610	44432249	ENSMUSG00000057098.7	Ebf1	ENSMUST00000149997.1	processed_transcript	+
chr11_44431610_44432249	chr11	44431610	44432249	ENSMUSG00000057098.7	Ebf1	ENSMUST00000135993.1	processed_transcript	+
chr11_44431610_44432249	chr11	44431610	44432249	ENSMUSG00000057098.7	Ebf1	ENSMUST00000169494.1	protein_coding	+
chr11_44725432_44725663	chr11	44725432	44725663	ENSMUSG00000057098.7	Ebf1	ENSMUST00000140822.1	processed_transcript	+
chr11_44929828_44930898	chr11	44929828	44930898	ENSMUSG00000084773.1	Gm12159	ENSMUST00000143869.1	lincRNA	-
chr11_44974376_44974823	chr11	44974376	44974823	ENSMUSG00000087089.1	Gm12160	ENSMUST00000146372.1	lincRNA	+
chr11_45094266_45094466	chr11	45094266	45094466	ENSMUSG00000080981.1	Gm12161	ENSMUST00000121454.1	transcribed_processed_pseudogene	-
chr11_45620820_45621790	chr11	45620820	45621790	ENSMUSG00000086686.1	F630206G17Rik	ENSMUST00000137002.1	processed_transcript	+
chr11_45664899_45666899	chr11	45664899	45666899	ENSMUSG00000006169.12	Clint1	ENSMUST00000164692.1	protein_coding	+
chr11_45664899_45666899	chr11	45664899	45666899	ENSMUSG00000006169.12	Clint1	ENSMUST00000109261.3	protein_coding	+
chr11_45664899_45666899	chr11	45664899	45666899	ENSMUSG00000006169.12	Clint1	ENSMUST00000109260.1	protein_coding	+
chr11_45756592_45758974	chr11	45756592	45758974	ENSMUSG00000044847.7	Lsm11	ENSMUST00000062458.5	nonsense_mediated_decay	-
chr11_45756592_45758974	chr11	45756592	45758974	ENSMUSG00000044847.7	Lsm11	ENSMUST00000129820.1	protein_coding	-
chr11_45768363_45769359	chr11	45768363	45769359	ENSMUSG00000011254.9	Thg1l	ENSMUST00000131182.1	processed_transcript	-
chr11_45768363_45769359	chr11	45768363	45769359	ENSMUSG00000011254.9	Thg1l	ENSMUST00000133851.1	processed_transcript	-
chr11_45768363_45769359	chr11	45768363	45769359	ENSMUSG00000011254.9	Thg1l	ENSMUST00000170454.1	protein_coding	-
chr11_45768363_45769359	chr11	45768363	45769359	ENSMUSG00000011254.9	Thg1l	ENSMUST00000011398.6	protein_coding	-
chr11_45768363_45769359	chr11	45768363	45769359	ENSMUSG00000011254.9	Thg1l	ENSMUST00000109254.1	protein_coding	-
chr11_45792928_45794810	chr11	45792928	45794810	ENSMUSG00000040489.5	Sox30	ENSMUST00000049038.3	protein_coding	+
chr11_45849899_45850224	chr11	45849899	45850224	ENSMUSG00000082870.1	Gm12165	ENSMUST00000117047.1	transcribed_processed_pseudogene	+
chr11_45865625_45866429	chr11	45865625	45866429	ENSMUSG00000069899.3	Gm12166	ENSMUST00000154156.1	processed_transcript	-
chr11_45865625_45866429	chr11	45865625	45866429	ENSMUSG00000091323.1	Gm12166	ENSMUST00000097417.4	pseudogene	-
chr11_45865625_45866429	chr11	45865625	45866429	ENSMUSG00000069899.3	Gm12166	ENSMUST00000093169.2	protein_coding	-
chr11_45869160_45871145	chr11	45869160	45871145	ENSMUSG00000011256.9	Adam19	ENSMUST00000011400.7	protein_coding	+
chr11_45869160_45871145	chr11	45869160	45871145	ENSMUSG00000011256.9	Adam19	ENSMUST00000137014.1	processed_transcript	+
chr11_45869160_45871145	chr11	45869160	45871145	ENSMUSG00000011256.9	Adam19	ENSMUST00000109251.1	protein_coding	+
chr11_45940717_45942593	chr11	45940717	45942593	ENSMUSG00000011256.9	Adam19	ENSMUST00000151565.1	processed_transcript	+
chr11_45958497_45959864	chr11	45958497	45959864	ENSMUSG00000087607.1	Gm16034	ENSMUST00000156446.1	antisense	-
chr11_45979405_45980328	chr11	45979405	45980328	ENSMUSG00000020411.2	Nipal4	ENSMUST00000020679.2	protein_coding	-
chr11_46048523_46049896	chr11	46048523	46049896	ENSMUSG00000048721.2	C030019I05Rik	ENSMUST00000060185.2	protein_coding	+
chr11_46123661_46126503	chr11	46123661	46126503	ENSMUSG00000020340.9	Cyfip2	ENSMUST00000129474.1	protein_coding	-
chr11_46123661_46126503	chr11	46123661	46126503	ENSMUSG00000020340.9	Cyfip2	ENSMUST00000165599.1	protein_coding	-
chr11_46123661_46126503	chr11	46123661	46126503	ENSMUSG00000020340.9	Cyfip2	ENSMUST00000093165.4	protein_coding	-
chr11_46123661_46126503	chr11	46123661	46126503	ENSMUSG00000020340.9	Cyfip2	ENSMUST00000093166.4	protein_coding	-
chr11_46155393_46156257	chr11	46155393	46156257	ENSMUSG00000085853.1	Gm12167	ENSMUST00000148132.1	antisense	+
chr11_46201573_46203658	chr11	46201573	46203658	ENSMUSG00000020395.7	Itk	ENSMUST00000155991.1	retained_intron	-
chr11_46201573_46203658	chr11	46201573	46203658	ENSMUSG00000020395.7	Itk	ENSMUST00000101306.3	protein_coding	-
chr11_46201573_46203658	chr11	46201573	46203658	ENSMUSG00000020395.7	Itk	ENSMUST00000020664.6	protein_coding	-
chr11_46201573_46203658	chr11	46201573	46203658	ENSMUSG00000020395.7	Itk	ENSMUST00000109237.2	protein_coding	-
chr11_46209020_46210168	chr11	46209020	46210168	ENSMUSG00000020401.6	Fam71b	ENSMUST00000139280.1	processed_transcript	+
chr11_46218000_46219154	chr11	46218000	46219154	ENSMUSG00000020401.6	Fam71b	ENSMUST00000063166.5	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000152119.1	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000140027.1	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000020665.6	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000170928.1	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000109231.1	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000109232.3	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000128940.1	protein_coding	+
chr11_46250174_46251519	chr11	46250174	46251519	ENSMUSG00000020397.9	Med7	ENSMUST00000156073.1	processed_transcript	+
chr11_46268034_46268743	chr11	46268034	46268743	ENSMUSG00000020399.8	Havcr2	ENSMUST00000020668.8	protein_coding	+
chr11_46268034_46268743	chr11	46268034	46268743	ENSMUSG00000020399.8	Havcr2	ENSMUST00000109229.1	protein_coding	+
chr11_46357028_46357945	chr11	46357028	46357945	ENSMUSG00000086981.2	Gm12171	ENSMUST00000150895.1	lincRNA	+
chr11_46384805_46385358	chr11	46384805	46385358	ENSMUSG00000046974.6	BC053393	ENSMUST00000050937.6	protein_coding	+
chr11_46503491_46504113	chr11	46503491	46504113	ENSMUSG00000040413.9	Timd2	ENSMUST00000169584.1	protein_coding	-
chr11_46511911_46512828	chr11	46511911	46512828	ENSMUSG00000040413.9	Timd2	ENSMUST00000109225.2	protein_coding	-
chr11_46519450_46520921	chr11	46519450	46520921	ENSMUSG00000040413.9	Timd2	ENSMUST00000125008.1	protein_coding	-
chr11_46519450_46520921	chr11	46519450	46520921	ENSMUSG00000040413.9	Timd2	ENSMUST00000055102.6	protein_coding	-
chr11_46547969_46548648	chr11	46547969	46548648	ENSMUSG00000040405.7	Havcr1	ENSMUST00000109224.2	protein_coding	+
chr11_46563570_46564183	chr11	46563570	46564183	ENSMUSG00000040405.7	Havcr1	ENSMUST00000109223.1	protein_coding	+
chr11_47192309_47193784	chr11	47192309	47193784	ENSMUSG00000020354.8	Sgcd	ENSMUST00000077221.5	protein_coding	-
chr11_47800908_47803250	chr11	47800908	47803250	ENSMUSG00000020354.8	Sgcd	ENSMUST00000128558.1	processed_transcript	-
chr11_48364299_48365966	chr11	48364299	48365966	ENSMUSG00000083954.1	Gm12179	ENSMUST00000118344.1	transcribed_processed_pseudogene	-
chr11_48612923_48614544	chr11	48612923	48614544	ENSMUSG00000020372.9	Gnb2l1	ENSMUST00000142269.1	retained_intron	+
chr11_48612923_48614544	chr11	48612923	48614544	ENSMUSG00000020372.9	Gnb2l1	ENSMUST00000139959.1	processed_transcript	+
chr11_48612923_48614544	chr11	48612923	48614544	ENSMUSG00000020372.9	Gnb2l1	ENSMUST00000020640.7	protein_coding	+
chr11_48612923_48614544	chr11	48612923	48614544	ENSMUSG00000020372.9	Gnb2l1	ENSMUST00000136703.1	retained_intron	+
chr11_48612923_48614544	chr11	48612923	48614544	ENSMUSG00000064500.1	SNORD95	ENSMUST00000082566.1	snoRNA	+
chr11_48630369_48632426	chr11	48630369	48632426	ENSMUSG00000040365.8	Trim41	ENSMUST00000140800.1	protein_coding	-
chr11_48630369_48632426	chr11	48630369	48632426	ENSMUSG00000040365.8	Trim41	ENSMUST00000047145.7	protein_coding	-
chr11_48639434_48640696	chr11	48639434	48640696	ENSMUSG00000040350.8	Trim7	ENSMUST00000109213.2	protein_coding	+
chr11_48639434_48640696	chr11	48639434	48640696	ENSMUSG00000078154.2	Gm12184	ENSMUST00000161192.2	protein_coding	-
chr11_48639434_48640696	chr11	48639434	48640696	ENSMUSG00000078154.2	Gm12184	ENSMUST00000104959.1	protein_coding	-
chr11_48650484_48652302	chr11	48650484	48652302	ENSMUSG00000040350.8	Trim7	ENSMUST00000046903.5	protein_coding	+
chr11_48650484_48652302	chr11	48650484	48652302	ENSMUSG00000040350.8	Trim7	ENSMUST00000155478.1	nonsense_mediated_decay	+
chr11_48650484_48652302	chr11	48650484	48652302	ENSMUSG00000040350.8	Trim7	ENSMUST00000109215.1	protein_coding	+
chr11_48650484_48652302	chr11	48650484	48652302	ENSMUSG00000040350.8	Trim7	ENSMUST00000149049.1	protein_coding	+
chr11_48650484_48652302	chr11	48650484	48652302	ENSMUSG00000040350.8	Trim7	ENSMUST00000129674.1	protein_coding	+
chr11_48666378_48667818	chr11	48666378	48667818	ENSMUSG00000086245.1	Gm16170	ENSMUST00000156882.1	processed_transcript	-
chr11_48684268_48687594	chr11	48684268	48687594	ENSMUSG00000046879.5	Irgm1	ENSMUST00000097271.2	protein_coding	-
chr11_48684268_48687594	chr11	48684268	48687594	ENSMUSG00000046879.5	Irgm1	ENSMUST00000169066.1	protein_coding	-
chr11_48684268_48687594	chr11	48684268	48687594	ENSMUSG00000046879.5	Irgm1	ENSMUST00000049519.3	protein_coding	-
chr11_48684268_48687594	chr11	48684268	48687594	ENSMUSG00000046879.5	Irgm1	ENSMUST00000147151.1	processed_transcript	-
chr11_48714311_48716048	chr11	48714311	48716048	ENSMUSG00000058163.6	Gm5431	ENSMUST00000109212.1	protein_coding	-
chr11_48714311_48716048	chr11	48714311	48716048	ENSMUSG00000058163.6	Gm5431	ENSMUST00000109210.1	protein_coding	-
chr11_48740135_48740907	chr11	48740135	48740907	ENSMUSG00000048852.7	Gm12185	ENSMUST00000129318.1	processed_transcript	-
chr11_48740135_48740907	chr11	48740135	48740907	ENSMUSG00000048852.7	Gm12185	ENSMUST00000094476.2	protein_coding	-
chr11_48805567_48806727	chr11	48805567	48806727	ENSMUSG00000078922.3	Tgtp1	ENSMUST00000132745.1	processed_transcript	-
chr11_48805567_48806727	chr11	48805567	48806727	ENSMUSG00000078922.3	Tgtp1	ENSMUST00000068063.3	protein_coding	-
chr11_48805567_48806727	chr11	48805567	48806727	ENSMUSG00000048852.7	Gm12185	ENSMUST00000059930.2	protein_coding	-
chr11_48807270_48808036	chr11	48807270	48808036	ENSMUSG00000078922.3	Tgtp1	ENSMUST00000146439.1	protein_coding	-
chr11_48877405_48878243	chr11	48877405	48878243	ENSMUSG00000078921.3	Tgtp2	ENSMUST00000128411.1	processed_transcript	-
chr11_48877405_48878243	chr11	48877405	48878243	ENSMUSG00000078921.3	Tgtp2	ENSMUST00000046745.6	protein_coding	-
chr11_48883727_48884470	chr11	48883727	48884470	ENSMUSG00000083178.1	Gm12187	ENSMUST00000119584.1	transcribed_unprocessed_pseudogene	-
chr11_48889310_48890362	chr11	48889310	48890362	ENSMUSG00000078920.2	Ifi47	ENSMUST00000109202.1	protein_coding	+
chr11_48900202_48900972	chr11	48900202	48900972	ENSMUSG00000078920.2	Ifi47	ENSMUST00000152914.1	processed_transcript	+
chr11_48900202_48900972	chr11	48900202	48900972	ENSMUSG00000078920.2	Ifi47	ENSMUST00000046704.6	protein_coding	+
chr11_48901309_48902255	chr11	48901309	48902255	ENSMUSG00000082116.1	Gm12188	ENSMUST00000117387.1	transcribed_processed_pseudogene	-
chr11_48984065_48984664	chr11	48984065	48984664	ENSMUSG00000040283.8	Btnl9	ENSMUST00000131363.1	retained_intron	-
chr11_49000618_49000967	chr11	49000618	49000967	ENSMUSG00000040283.8	Btnl9	ENSMUST00000128462.1	processed_transcript	-
chr11_49000618_49000967	chr11	49000618	49000967	ENSMUSG00000040283.8	Btnl9	ENSMUST00000153999.1	protein_coding	-
chr11_49000618_49000967	chr11	49000618	49000967	ENSMUSG00000040283.8	Btnl9	ENSMUST00000066531.6	protein_coding	-
chr11_49000618_49000967	chr11	49000618	49000967	ENSMUSG00000040283.8	Btnl9	ENSMUST00000046522.6	protein_coding	-
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000109198.1	protein_coding	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000137061.1	protein_coding	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000157023.1	retained_intron	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000128932.1	processed_transcript	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000150284.1	protein_coding	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000109197.1	protein_coding	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000151228.1	protein_coding	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000133150.1	protein_coding	+
chr11_49015507_49018186	chr11	49015507	49018186	ENSMUSG00000046311.5	Zfp62	ENSMUST00000136539.1	protein_coding	+
chr11_49025453_49027624	chr11	49025453	49027624	ENSMUSG00000046311.5	Zfp62	ENSMUST00000136691.1	protein_coding	+
chr11_49025453_49027624	chr11	49025453	49027624	ENSMUSG00000046311.5	Zfp62	ENSMUST00000061757.2	protein_coding	+
chr11_49056694_49058487	chr11	49056694	49058487	ENSMUSG00000020346.10	Mgat1	ENSMUST00000167400.1	protein_coding	+
chr11_49056694_49058487	chr11	49056694	49058487	ENSMUSG00000020346.10	Mgat1	ENSMUST00000081794.6	protein_coding	+
chr11_49056694_49058487	chr11	49056694	49058487	ENSMUSG00000020346.10	Mgat1	ENSMUST00000135489.1	processed_transcript	+
chr11_49056694_49058487	chr11	49056694	49058487	ENSMUSG00000020346.10	Mgat1	ENSMUST00000152451.1	processed_transcript	+
chr11_49058523_49059454	chr11	49058523	49059454	ENSMUSG00000020346.10	Mgat1	ENSMUST00000156607.1	processed_transcript	+
chr11_49063088_49064807	chr11	49063088	49064807	ENSMUSG00000020346.10	Mgat1	ENSMUST00000101293.4	protein_coding	+
chr11_49063088_49064807	chr11	49063088	49064807	ENSMUSG00000020346.10	Mgat1	ENSMUST00000149406.1	processed_transcript	+
chr11_49063088_49064807	chr11	49063088	49064807	ENSMUSG00000020346.10	Mgat1	ENSMUST00000129541.1	processed_transcript	+
chr11_49063088_49064807	chr11	49063088	49064807	ENSMUSG00000020346.10	Mgat1	ENSMUST00000129588.1	protein_coding	+
chr11_49069755_49070092	chr11	49069755	49070092	ENSMUSG00000020346.10	Mgat1	ENSMUST00000135314.1	processed_transcript	+
chr11_49106011_49106790	chr11	49106011	49106790	ENSMUSG00000050959.3	Olfr1392	ENSMUST00000054866.3	protein_coding	+
chr11_49106897_49107124	chr11	49106897	49107124	ENSMUSG00000050959.3	Olfr1392	ENSMUST00000054866.3	protein_coding	+
chr11_49140094_49140888	chr11	49140094	49140888	ENSMUSG00000044373.1	Olfr1391	ENSMUST00000053387.1	protein_coding	+
chr11_49422506_49423945	chr11	49422506	49423945	ENSMUSG00000020357.3	Flt4	ENSMUST00000020617.2	protein_coding	+
chr11_49422506_49423945	chr11	49422506	49423945	ENSMUSG00000020357.3	Flt4	ENSMUST00000152253.1	processed_transcript	+
chr11_49525514_49527555	chr11	49525514	49527555	ENSMUSG00000020362.7	Cnot6	ENSMUST00000020624.6	protein_coding	-
chr11_49525514_49527555	chr11	49525514	49527555	ENSMUSG00000020362.7	Cnot6	ENSMUST00000145353.1	protein_coding	-
chr11_49585088_49585323	chr11	49585088	49585323	ENSMUSG00000092894.1	AL606479.2	ENSMUST00000175153.1	miRNA	+
chr11_49606670_49608784	chr11	49606670	49608784	ENSMUSG00000020363.6	Gfpt2	ENSMUST00000130129.1	retained_intron	+
chr11_49606670_49608784	chr11	49606670	49608784	ENSMUSG00000020363.6	Gfpt2	ENSMUST00000020629.4	protein_coding	+
chr11_49659488_49661340	chr11	49659488	49661340	ENSMUSG00000020366.11	Mapk9	ENSMUST00000109179.2	protein_coding	+
chr11_49659488_49661340	chr11	49659488	49661340	ENSMUSG00000020366.11	Mapk9	ENSMUST00000164643.1	protein_coding	+
chr11_49659488_49661340	chr11	49659488	49661340	ENSMUSG00000020366.11	Mapk9	ENSMUST00000020634.7	protein_coding	+
chr11_49659488_49661340	chr11	49659488	49661340	ENSMUSG00000020366.11	Mapk9	ENSMUST00000144857.1	processed_transcript	+
chr11_49659488_49661340	chr11	49659488	49661340	ENSMUSG00000020366.11	Mapk9	ENSMUST00000148274.1	processed_transcript	+
chr11_49659488_49661340	chr11	49659488	49661340	ENSMUSG00000020366.11	Mapk9	ENSMUST00000164572.1	protein_coding	+
chr11_49709407_49710177	chr11	49709407	49710177	ENSMUSG00000080487.1	AL606479.1	ENSMUST00000116837.1	miRNA	+
chr11_49714385_49717402	chr11	49714385	49717402	ENSMUSG00000020374.10	Rasgef1c	ENSMUST00000093141.5	protein_coding	+
chr11_49714385_49717402	chr11	49714385	49717402	ENSMUSG00000020374.10	Rasgef1c	ENSMUST00000093142.5	protein_coding	+
chr11_49714385_49717402	chr11	49714385	49717402	ENSMUSG00000020374.10	Rasgef1c	ENSMUST00000063444.2	protein_coding	+
chr11_49837882_49839498	chr11	49837882	49839498	ENSMUSG00000020376.10	Rnf130	ENSMUST00000054684.7	protein_coding	+
chr11_49837882_49839498	chr11	49837882	49839498	ENSMUSG00000020376.10	Rnf130	ENSMUST00000102776.4	protein_coding	+
chr11_49943844_49945773	chr11	49943844	49945773	ENSMUSG00000036644.9	Tbc1d9b	ENSMUST00000093138.6	protein_coding	+
chr11_49943844_49945773	chr11	49943844	49945773	ENSMUSG00000036644.9	Tbc1d9b	ENSMUST00000101270.4	protein_coding	+
chr11_49943844_49945773	chr11	49943844	49945773	ENSMUSG00000036644.9	Tbc1d9b	ENSMUST00000147628.1	processed_transcript	+
chr11_49958757_49959161	chr11	49958757	49959161	ENSMUSG00000036644.9	Tbc1d9b	ENSMUST00000137852.1	processed_transcript	+
chr11_49960607_49961966	chr11	49960607	49961966	ENSMUSG00000036644.9	Tbc1d9b	ENSMUST00000124605.1	processed_transcript	+
chr11_49974711_49976391	chr11	49974711	49976391	ENSMUSG00000036644.9	Tbc1d9b	ENSMUST00000141520.1	processed_transcript	+
chr11_49987735_49988920	chr11	49987735	49988920	ENSMUSG00000020381.4	3010026O09Rik	ENSMUST00000143480.1	processed_transcript	+
chr11_49987735_49988920	chr11	49987735	49988920	ENSMUSG00000020381.4	3010026O09Rik	ENSMUST00000020647.3	protein_coding	+
chr11_49987735_49988920	chr11	49987735	49988920	ENSMUSG00000020381.4	3010026O09Rik	ENSMUST00000123164.1	nonsense_mediated_decay	+
chr11_50018437_50019500	chr11	50018437	50019500	ENSMUSG00000015837.9	Sqstm1	ENSMUST00000131214.1	retained_intron	-
chr11_50023263_50025401	chr11	50023263	50025401	ENSMUSG00000036620.8	Mgat4b	ENSMUST00000147468.1	protein_coding	+
chr11_50023263_50025401	chr11	50023263	50025401	ENSMUSG00000015837.9	Sqstm1	ENSMUST00000143379.1	protein_coding	-
chr11_50023263_50025401	chr11	50023263	50025401	ENSMUSG00000015837.9	Sqstm1	ENSMUST00000102774.4	protein_coding	-
chr11_50023263_50025401	chr11	50023263	50025401	ENSMUSG00000015837.9	Sqstm1	ENSMUST00000015981.5	protein_coding	-
chr11_50037724_50039791	chr11	50037724	50039791	ENSMUSG00000036620.8	Mgat4b	ENSMUST00000041725.7	protein_coding	+
chr11_50049721_50051279	chr11	50049721	50051279	ENSMUSG00000085364.1	Gm16641	ENSMUST00000129438.1	lincRNA	+
chr11_50051838_50052310	chr11	50051838	50052310	ENSMUSG00000020377.8	Ltc4s	ENSMUST00000102772.3	protein_coding	-
chr11_50051838_50052310	chr11	50051838	50052310	ENSMUSG00000020377.8	Ltc4s	ENSMUST00000125555.1	protein_coding	-
chr11_50051838_50052310	chr11	50051838	50052310	ENSMUSG00000020377.8	Ltc4s	ENSMUST00000101265.2	protein_coding	-
chr11_50104058_50106416	chr11	50104058	50106416	ENSMUSG00000050567.9	Maml1	ENSMUST00000102771.3	protein_coding	-
chr11_50104058_50106416	chr11	50104058	50106416	ENSMUSG00000050567.9	Maml1	ENSMUST00000135868.1	protein_coding	-
chr11_50104058_50106416	chr11	50104058	50106416	ENSMUSG00000050567.9	Maml1	ENSMUST00000059458.4	protein_coding	-
chr11_50138210_50140306	chr11	50138210	50140306	ENSMUSG00000020368.8	Canx	ENSMUST00000020637.8	protein_coding	-
chr11_50167911_50169351	chr11	50167911	50169351	ENSMUSG00000050087.3	Cby3	ENSMUST00000164067.1	protein_coding	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000109142.1	protein_coding	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000069304.7	protein_coding	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000126737.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000127964.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000077817.7	protein_coding	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000123371.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000150153.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000129631.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000133435.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000128220.1	processed_transcript	+
chr11_50189955_50192214	chr11	50189955	50192214	ENSMUSG00000007850.10	Hnrnph1	ENSMUST00000134230.1	processed_transcript	+
chr11_50235018_50236200	chr11	50235018	50236200	ENSMUSG00000020375.3	Rufy1	ENSMUST00000129304.1	processed_transcript	-
chr11_50243501_50245452	chr11	50243501	50245452	ENSMUSG00000020375.3	Rufy1	ENSMUST00000020643.3	protein_coding	-
chr11_50415092_50417432	chr11	50415092	50417432	ENSMUSG00000036545.8	Adamts2	ENSMUST00000040523.8	protein_coding	+
chr11_50415092_50417432	chr11	50415092	50417432	ENSMUSG00000085564.1	Gm12198	ENSMUST00000154068.1	processed_transcript	-
chr11_50639743_50641599	chr11	50639743	50641599	ENSMUSG00000044807.7	Zfp354c	ENSMUST00000136333.1	processed_transcript	-
chr11_50639743_50641599	chr11	50639743	50641599	ENSMUSG00000044807.7	Zfp354c	ENSMUST00000139465.1	processed_transcript	-
chr11_50639743_50641599	chr11	50639743	50641599	ENSMUSG00000044807.7	Zfp354c	ENSMUST00000000632.6	protein_coding	-
chr11_50639743_50641599	chr11	50639743	50641599	ENSMUSG00000044807.7	Zfp354c	ENSMUST00000109135.2	protein_coding	-
chr11_50653924_50655433	chr11	50653924	50655433	ENSMUSG00000044296.3	Zfp879	ENSMUST00000109133.1	protein_coding	-
chr11_50653924_50655433	chr11	50653924	50655433	ENSMUSG00000044296.3	Zfp879	ENSMUST00000171301.1	protein_coding	-
chr11_50653924_50655433	chr11	50653924	50655433	ENSMUSG00000044296.3	Zfp879	ENSMUST00000049625.1	protein_coding	-
chr11_50653924_50655433	chr11	50653924	50655433	ENSMUSG00000044296.3	Zfp879	ENSMUST00000109134.1	protein_coding	-
chr11_50662127_50665130	chr11	50662127	50665130	ENSMUSG00000000617.8	Grm6	ENSMUST00000156890.1	processed_transcript	+
chr11_50662127_50665130	chr11	50662127	50665130	ENSMUSG00000000617.8	Grm6	ENSMUST00000171427.1	protein_coding	+
chr11_50662127_50665130	chr11	50662127	50665130	ENSMUSG00000000617.8	Grm6	ENSMUST00000000631.7	protein_coding	+
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000136599.1	processed_transcript	-
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000125749.1	protein_coding	-
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000126718.1	processed_transcript	-
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000050595.6	protein_coding	-
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000109131.1	protein_coding	-
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000170151.1	protein_coding	-
chr11_50700389_50701696	chr11	50700389	50701696	ENSMUSG00000048728.8	Zfp454	ENSMUST00000163301.1	protein_coding	-
chr11_50728984_50730079	chr11	50728984	50730079	ENSMUSG00000049321.10	Zfp2	ENSMUST00000151027.1	processed_transcript	-
chr11_50728984_50730079	chr11	50728984	50730079	ENSMUSG00000049321.10	Zfp2	ENSMUST00000124748.1	processed_transcript	-
chr11_50728984_50730079	chr11	50728984	50730079	ENSMUSG00000049321.10	Zfp2	ENSMUST00000150903.1	processed_transcript	-
chr11_50728984_50730079	chr11	50728984	50730079	ENSMUSG00000049321.10	Zfp2	ENSMUST00000109128.1	protein_coding	-
chr11_50728984_50730079	chr11	50728984	50730079	ENSMUSG00000049321.10	Zfp2	ENSMUST00000116378.1	protein_coding	-
chr11_50743861_50745574	chr11	50743861	50745574	ENSMUSG00000020335.7	Zfp354b	ENSMUST00000152296.1	processed_transcript	-
chr11_50743861_50745574	chr11	50743861	50745574	ENSMUSG00000020335.7	Zfp354b	ENSMUST00000164280.1	protein_coding	-
chr11_50743861_50745574	chr11	50743861	50745574	ENSMUSG00000020335.7	Zfp354b	ENSMUST00000109124.3	protein_coding	-
chr11_50765565_50766193	chr11	50765565	50766193	ENSMUSG00000044542.2	Prop1	ENSMUST00000159179.1	retained_intron	-
chr11_50840339_50840671	chr11	50840339	50840671	ENSMUSG00000059397.1	Olfr54	ENSMUST00000072152.1	protein_coding	+
chr11_50872386_50873627	chr11	50872386	50873627	ENSMUSG00000020364.7	Zfp354a	ENSMUST00000102766.3	protein_coding	+
chr11_50872386_50873627	chr11	50872386	50873627	ENSMUSG00000020364.7	Zfp354a	ENSMUST00000156914.1	processed_transcript	+
chr11_50872386_50873627	chr11	50872386	50873627	ENSMUSG00000020364.7	Zfp354a	ENSMUST00000109122.1	protein_coding	+
chr11_50872386_50873627	chr11	50872386	50873627	ENSMUSG00000020364.7	Zfp354a	ENSMUST00000109119.1	protein_coding	+
chr11_50872386_50873627	chr11	50872386	50873627	ENSMUSG00000020364.7	Zfp354a	ENSMUST00000109121.2	protein_coding	+
chr11_50872386_50873627	chr11	50872386	50873627	ENSMUSG00000020364.7	Zfp354a	ENSMUST00000020628.5	protein_coding	+
chr11_50897884_50898478	chr11	50897884	50898478	ENSMUSG00000072982.1	9230009I02Rik	ENSMUST00000101255.1	protein_coding	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000093132.6	protein_coding	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000126131.1	nonsense_mediated_decay	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000133200.1	retained_intron	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000136587.1	retained_intron	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000148053.1	nonsense_mediated_decay	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000146776.1	retained_intron	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000020385.10	Clk4	ENSMUST00000109113.1	protein_coding	+
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000045942.6	BC049762	ENSMUST00000065950.3	protein_coding	-
chr11_51075915_51077428	chr11	51075915	51077428	ENSMUSG00000045942.6	BC049762	ENSMUST00000054226.2	protein_coding	-
chr11_51102771_51104456	chr11	51102771	51104456	ENSMUSG00000063564.7	Col23a1	ENSMUST00000102765.2	protein_coding	+
chr11_51397466_51399179	chr11	51397466	51399179	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000101250.5	nonsense_mediated_decay	+
chr11_51397466_51399179	chr11	51397466	51399179	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000167797.1	protein_coding	+
chr11_51397466_51399179	chr11	51397466	51399179	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000020625.6	protein_coding	+
chr11_51397466_51399179	chr11	51397466	51399179	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000156128.1	retained_intron	+
chr11_51397466_51399179	chr11	51397466	51399179	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000164864.1	retained_intron	+
chr11_51397466_51399179	chr11	51397466	51399179	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000109105.2	retained_intron	+
chr11_51404739_51405028	chr11	51404739	51405028	ENSMUSG00000020359.7	Agxt2l2	ENSMUST00000169823.1	retained_intron	+
chr11_51419222_51420872	chr11	51419222	51420872	ENSMUSG00000020358.10	Hnrnpab	ENSMUST00000109103.3	protein_coding	-
chr11_51419222_51420872	chr11	51419222	51420872	ENSMUSG00000020358.10	Hnrnpab	ENSMUST00000101249.2	protein_coding	-
chr11_51419222_51420872	chr11	51419222	51420872	ENSMUSG00000020358.10	Hnrnpab	ENSMUST00000074669.3	protein_coding	-
chr11_51419222_51420872	chr11	51419222	51420872	ENSMUSG00000020358.10	Hnrnpab	ENSMUST00000163947.1	protein_coding	-
chr11_51432647_51433684	chr11	51432647	51433684	ENSMUSG00000001056.3	Nhp2	ENSMUST00000127405.1	protein_coding	+
chr11_51432647_51433684	chr11	51432647	51433684	ENSMUSG00000001056.3	Nhp2	ENSMUST00000001083.3	retained_intron	+
chr11_51448798_51450378	chr11	51448798	51450378	ENSMUSG00000001054.3	Rmnd5b	ENSMUST00000132854.1	processed_transcript	-
chr11_51448798_51450378	chr11	51448798	51450378	ENSMUSG00000001054.3	Rmnd5b	ENSMUST00000001081.3	protein_coding	-
chr11_51448798_51450378	chr11	51448798	51450378	ENSMUSG00000001054.3	Rmnd5b	ENSMUST00000136020.1	nonsense_mediated_decay	-
chr11_51463078_51464972	chr11	51463078	51464972	ENSMUSG00000052563.7	D930048N14Rik	ENSMUST00000117859.1	protein_coding	+
chr11_51463078_51464972	chr11	51463078	51464972	ENSMUSG00000052563.7	D930048N14Rik	ENSMUST00000064493.5	protein_coding	+
chr11_51463078_51464972	chr11	51463078	51464972	ENSMUSG00000052563.7	D930048N14Rik	ENSMUST00000170689.1	protein_coding	+
chr11_51463078_51464972	chr11	51463078	51464972	ENSMUSG00000001053.9	N4bp3	ENSMUST00000142721.1	protein_coding	-
chr11_51463078_51464972	chr11	51463078	51464972	ENSMUSG00000001053.9	N4bp3	ENSMUST00000156835.1	protein_coding	-
chr11_51463078_51464972	chr11	51463078	51464972	ENSMUSG00000001053.9	N4bp3	ENSMUST00000001080.9	protein_coding	-
chr11_51501707_51503122	chr11	51501707	51503122	ENSMUSG00000007777.3	0610009B22Rik	ENSMUST00000007921.2	protein_coding	-
chr11_51501707_51503122	chr11	51501707	51503122	ENSMUSG00000007777.3	0610009B22Rik	ENSMUST00000109098.1	protein_coding	-
chr11_51551007_51551302	chr11	51551007	51551302	ENSMUSG00000084744.1	SNORA48	ENSMUST00000122795.1	snoRNA	-
chr11_51551514_51551723	chr11	51551514	51551723	ENSMUSG00000084744.1	SNORA48	ENSMUST00000122795.1	snoRNA	-
chr11_51568934_51570878	chr11	51568934	51570878	ENSMUSG00000036391.9	Sec24a	ENSMUST00000147255.1	retained_intron	-
chr11_51568934_51570878	chr11	51568934	51570878	ENSMUSG00000036391.9	Sec24a	ENSMUST00000109092.1	protein_coding	-
chr11_51568934_51570878	chr11	51568934	51570878	ENSMUSG00000036391.9	Sec24a	ENSMUST00000064297.4	protein_coding	-
chr11_51568934_51570878	chr11	51568934	51570878	ENSMUSG00000036391.9	Sec24a	ENSMUST00000168784.1	protein_coding	-
chr11_51568934_51570878	chr11	51568934	51570878	ENSMUSG00000036391.9	Sec24a	ENSMUST00000038210.5	protein_coding	-
chr11_51568934_51570878	chr11	51568934	51570878	ENSMUSG00000036391.9	Sec24a	ENSMUST00000109097.2	protein_coding	-
chr11_51576553_51577819	chr11	51576553	51577819	ENSMUSG00000020386.5	Sar1b	ENSMUST00000020653.5	protein_coding	+
chr11_51576553_51577819	chr11	51576553	51577819	ENSMUSG00000020386.5	Sar1b	ENSMUST00000136363.1	processed_transcript	+
chr11_51576553_51577819	chr11	51576553	51577819	ENSMUSG00000036391.9	Sec24a	ENSMUST00000154325.1	retained_intron	-
chr11_51668483_51672779	chr11	51668483	51672779	ENSMUSG00000020387.8	Phf15	ENSMUST00000151277.1	processed_transcript	-
chr11_51668483_51672779	chr11	51668483	51672779	ENSMUSG00000020387.8	Phf15	ENSMUST00000109091.1	protein_coding	-
chr11_51668483_51672779	chr11	51668483	51672779	ENSMUSG00000020387.8	Phf15	ENSMUST00000074967.4	protein_coding	-
chr11_51668483_51672779	chr11	51668483	51672779	ENSMUSG00000020387.8	Phf15	ENSMUST00000020655.7	protein_coding	-
chr11_51668483_51672779	chr11	51668483	51672779	ENSMUSG00000020387.8	Phf15	ENSMUST00000109090.1	protein_coding	-
chr11_51780718_51781969	chr11	51780718	51781969	ENSMUSG00000020392.8	Cdkn2aipnl	ENSMUST00000102763.4	protein_coding	+
chr11_51780718_51781969	chr11	51780718	51781969	ENSMUSG00000020392.8	Cdkn2aipnl	ENSMUST00000127136.1	nonsense_mediated_decay	+
chr11_51813003_51814717	chr11	51813003	51814717	ENSMUSG00000086493.1	Gm12204	ENSMUST00000147412.1	antisense	+
chr11_51813003_51814717	chr11	51813003	51814717	ENSMUSG00000020390.6	Ube2b	ENSMUST00000147833.1	processed_transcript	-
chr11_51813003_51814717	chr11	51813003	51814717	ENSMUSG00000020390.6	Ube2b	ENSMUST00000124699.1	processed_transcript	-
chr11_51813003_51814717	chr11	51813003	51814717	ENSMUSG00000020390.6	Ube2b	ENSMUST00000109086.1	protein_coding	-
chr11_51813003_51814717	chr11	51813003	51814717	ENSMUSG00000020390.6	Ube2b	ENSMUST00000020657.6	protein_coding	-
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000121591.1	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000063303.4	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109082.2	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109081.2	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109080.2	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109079.2	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109077.2	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109074.3	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109078.1	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000063321.6	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000135076.1	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000143228.1	nonsense_mediated_decay	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000120374.1	protein_coding	+
chr11_51816770_51818214	chr11	51816770	51818214	ENSMUSG00000020389.11	Cdkl3	ENSMUST00000109076.1	protein_coding	+
chr11_51911182_51913561	chr11	51911182	51913561	ENSMUSG00000020349.4	Ppp2ca	ENSMUST00000020608.2	protein_coding	+
chr11_51911182_51913561	chr11	51911182	51913561	ENSMUSG00000093006.1	AL935177.2	ENSMUST00000175265.1	miRNA	-
chr11_51940808_51941087	chr11	51940808	51941087	ENSMUSG00000092028.1	Gm17500	ENSMUST00000171891.1	lincRNA	-
chr11_52044739_52046438	chr11	52044739	52046438	ENSMUSG00000036309.8	Skp1a	ENSMUST00000147684.1	nonsense_mediated_decay	+
chr11_52044739_52046438	chr11	52044739	52046438	ENSMUSG00000036309.8	Skp1a	ENSMUST00000037324.5	protein_coding	+
chr11_52044739_52046438	chr11	52044739	52046438	ENSMUSG00000036309.8	Skp1a	ENSMUST00000093121.6	retained_intron	+
chr11_52044739_52046438	chr11	52044739	52046438	ENSMUSG00000036309.8	Skp1a	ENSMUST00000166537.1	protein_coding	+
chr11_52044739_52046438	chr11	52044739	52046438	ENSMUSG00000036309.8	Skp1a	ENSMUST00000109072.1	protein_coding	+
chr11_52088275_52090005	chr11	52088275	52090005	ENSMUSG00000086395.1	A630014C17Rik	ENSMUST00000150973.1	antisense	+
chr11_52095601_52098099	chr11	52095601	52098099	ENSMUSG00000000782.8	Tcf7	ENSMUST00000109071.1	protein_coding	-
chr11_52095601_52098099	chr11	52095601	52098099	ENSMUSG00000000782.8	Tcf7	ENSMUST00000170418.1	protein_coding	-
chr11_52095601_52098099	chr11	52095601	52098099	ENSMUSG00000000782.8	Tcf7	ENSMUST00000072425.1	protein_coding	-
chr11_52095601_52098099	chr11	52095601	52098099	ENSMUSG00000000782.8	Tcf7	ENSMUST00000086844.3	protein_coding	-
chr11_52173265_52175524	chr11	52173265	52175524	ENSMUSG00000020402.4	Vdac1	ENSMUST00000102758.1	protein_coding	+
chr11_52173265_52175524	chr11	52173265	52175524	ENSMUSG00000020402.4	Vdac1	ENSMUST00000125694.1	nonsense_mediated_decay	+
chr11_52187317_52188334	chr11	52187317	52188334	ENSMUSG00000020402.4	Vdac1	ENSMUST00000157052.1	processed_transcript	+
chr11_52187317_52188334	chr11	52187317	52188334	ENSMUSG00000020402.4	Vdac1	ENSMUST00000020673.2	protein_coding	+
chr11_52187317_52188334	chr11	52187317	52188334	ENSMUSG00000020402.4	Vdac1	ENSMUST00000109065.1	protein_coding	+
chr11_52209508_52210788	chr11	52209508	52210788	ENSMUSG00000036275.6	9530068E07Rik	ENSMUST00000109057.1	protein_coding	+
chr11_52209508_52210788	chr11	52209508	52210788	ENSMUSG00000036275.6	9530068E07Rik	ENSMUST00000153855.1	processed_transcript	+
chr11_52209508_52210788	chr11	52209508	52210788	ENSMUSG00000036275.6	9530068E07Rik	ENSMUST00000036952.4	protein_coding	+
chr11_52209508_52210788	chr11	52209508	52210788	ENSMUSG00000036275.6	9530068E07Rik	ENSMUST00000166946.1	protein_coding	+
chr11_52209508_52210788	chr11	52209508	52210788	ENSMUSG00000036275.6	9530068E07Rik	ENSMUST00000136303.1	processed_transcript	+
chr11_52577669_52580146	chr11	52577669	52580146	ENSMUSG00000036264.8	Fstl4	ENSMUST00000036796.7	protein_coding	+
chr11_52577669_52580146	chr11	52577669	52580146	ENSMUSG00000036264.8	Fstl4	ENSMUST00000166394.1	protein_coding	+
chr11_53112970_53114973	chr11	53112970	53114973	ENSMUSG00000020361.7	Hspa4	ENSMUST00000151854.1	processed_transcript	-
chr11_53112970_53114973	chr11	53112970	53114973	ENSMUSG00000020361.7	Hspa4	ENSMUST00000020630.7	protein_coding	-
chr11_53137760_53138961	chr11	53137760	53138961	ENSMUSG00000018239.3	Zcchc10	ENSMUST00000018383.3	protein_coding	+
chr11_53140554_53140964	chr11	53140554	53140964	ENSMUSG00000018239.3	Zcchc10	ENSMUST00000141585.1	nonsense_mediated_decay	+
chr11_53158586_53159204	chr11	53158586	53159204	ENSMUSG00000082263.1	Gm11188	ENSMUST00000122382.1	transcribed_processed_pseudogene	-
chr11_53163525_53165973	chr11	53163525	53165973	ENSMUSG00000049470.6	Aff4	ENSMUST00000060945.5	protein_coding	+
chr11_53163525_53165973	chr11	53163525	53165973	ENSMUSG00000049470.6	Aff4	ENSMUST00000167934.1	protein_coding	+
chr11_53236294_53237199	chr11	53236294	53237199	ENSMUSG00000036216.5	Leap2	ENSMUST00000036045.5	protein_coding	-
chr11_53243724_53245538	chr11	53243724	53245538	ENSMUSG00000018238.6	Gdf9	ENSMUST00000156037.1	processed_transcript	+
chr11_53243724_53245538	chr11	53243724	53245538	ENSMUSG00000044894.8	Uqcrq	ENSMUST00000109019.1	protein_coding	-
chr11_53243724_53245538	chr11	53243724	53245538	ENSMUSG00000044894.8	Uqcrq	ENSMUST00000109021.3	protein_coding	-
chr11_53243724_53245538	chr11	53243724	53245538	ENSMUSG00000044894.8	Uqcrq	ENSMUST00000156503.1	processed_transcript	-
chr11_53243724_53245538	chr11	53243724	53245538	ENSMUSG00000044894.8	Uqcrq	ENSMUST00000061326.4	protein_coding	-
chr11_53269964_53271572	chr11	53269964	53271572	ENSMUSG00000018387.6	Shroom1	ENSMUST00000109013.2	protein_coding	+
chr11_53269964_53271572	chr11	53269964	53271572	ENSMUSG00000018387.6	Shroom1	ENSMUST00000018531.5	protein_coding	+
chr11_53269964_53271572	chr11	53269964	53271572	ENSMUSG00000018387.6	Shroom1	ENSMUST00000146001.1	retained_intron	+
chr11_53269964_53271572	chr11	53269964	53271572	ENSMUSG00000018387.6	Shroom1	ENSMUST00000109010.2	retained_intron	+
chr11_53269964_53271572	chr11	53269964	53271572	ENSMUSG00000018387.6	Shroom1	ENSMUST00000093114.4	protein_coding	+
chr11_53269964_53271572	chr11	53269964	53271572	ENSMUSG00000072963.2	Gm10447	ENSMUST00000084653.3	protein_coding	-
chr11_53276811_53277845	chr11	53276811	53277845	ENSMUSG00000085707.1	Gm12212	ENSMUST00000141032.1	antisense	-
chr11_53282680_53284409	chr11	53282680	53284409	ENSMUSG00000049427.2	Gm9837	ENSMUST00000057722.2	protein_coding	-
chr11_53291961_53294119	chr11	53291961	53294119	ENSMUSG00000054450.1	Gm9945	ENSMUST00000067523.1	protein_coding	+
chr11_53291961_53294119	chr11	53291961	53294119	ENSMUSG00000044352.4	Ankrd43	ENSMUST00000050184.3	protein_coding	-
chr11_53291961_53294119	chr11	53291961	53294119	ENSMUSG00000044352.4	Ankrd43	ENSMUST00000104955.1	protein_coding	-
chr11_53332297_53335488	chr11	53332297	53335488	ENSMUSG00000018398.12	Sept8	ENSMUST00000142800.1	protein_coding	+
chr11_53332297_53335488	chr11	53332297	53335488	ENSMUSG00000018398.12	Sept8	ENSMUST00000108987.1	protein_coding	+
chr11_53332297_53335488	chr11	53332297	53335488	ENSMUSG00000018398.12	Sept8	ENSMUST00000121334.1	protein_coding	+
chr11_53332297_53335488	chr11	53332297	53335488	ENSMUSG00000018398.12	Sept8	ENSMUST00000117061.1	protein_coding	+
chr11_53332297_53335488	chr11	53332297	53335488	ENSMUSG00000018398.12	Sept8	ENSMUST00000120878.2	protein_coding	+
chr11_53332297_53335488	chr11	53332297	53335488	ENSMUSG00000018398.12	Sept8	ENSMUST00000147912.1	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000057330.8	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000120613.2	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000173744.1	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000108954.2	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000118353.2	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000140359.2	processed_transcript	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000018395.12	Kif3a	ENSMUST00000132496.2	protein_coding	+
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000086851.1	A430108G06Rik	ENSMUST00000153461.1	processed_transcript	-
chr11_53380293_53381637	chr11	53380293	53381637	ENSMUSG00000086851.1	A430108G06Rik	ENSMUST00000155165.1	processed_transcript	-
chr11_53430618_53431072	chr11	53430618	53431072	ENSMUSG00000000869.6	Il4	ENSMUST00000150568.1	protein_coding	-
chr11_53430618_53431072	chr11	53430618	53431072	ENSMUSG00000000869.6	Il4	ENSMUST00000127858.1	processed_transcript	-
chr11_53431831_53432083	chr11	53431831	53432083	ENSMUSG00000000869.6	Il4	ENSMUST00000140684.1	protein_coding	-
chr11_53431831_53432083	chr11	53431831	53432083	ENSMUSG00000000869.6	Il4	ENSMUST00000000889.6	protein_coding	-
chr11_53519982_53521413	chr11	53519982	53521413	ENSMUSG00000020380.9	Rad50	ENSMUST00000108933.2	protein_coding	-
chr11_53519982_53521413	chr11	53519982	53521413	ENSMUSG00000020380.9	Rad50	ENSMUST00000124352.1	protein_coding	-
chr11_53519982_53521413	chr11	53519982	53521413	ENSMUSG00000020380.9	Rad50	ENSMUST00000128483.1	nonsense_mediated_decay	-
chr11_53519982_53521413	chr11	53519982	53521413	ENSMUSG00000020380.9	Rad50	ENSMUST00000020649.7	protein_coding	-
chr11_53519982_53521413	chr11	53519982	53521413	ENSMUSG00000020380.9	Rad50	ENSMUST00000102756.3	protein_coding	-
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000108920.2	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000140866.1	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000108922.1	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000128336.1	processed_transcript	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000142221.1	nonsense_mediated_decay	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000169660.1	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000138913.1	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000123376.1	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000019043.6	protein_coding	+
chr11_53582715_53585250	chr11	53582715	53585250	ENSMUSG00000018899.9	Irf1	ENSMUST00000133291.1	protein_coding	+
chr11_53606451_53607088	chr11	53606451	53607088	ENSMUSG00000078860.1	Gm11006	ENSMUST00000108919.1	protein_coding	-
chr11_53607398_53609255	chr11	53607398	53609255	ENSMUSG00000081769.2	Gm12216	ENSMUST00000153206.1	processed_transcript	-
chr11_53609341_53610779	chr11	53609341	53610779	ENSMUSG00000081769.2	Gm12216	ENSMUST00000153206.1	processed_transcript	-
chr11_53670935_53673342	chr11	53670935	53673342	ENSMUSG00000081769.2	Gm12216	ENSMUST00000121435.1	protein_coding	-
chr11_53670935_53673342	chr11	53670935	53673342	ENSMUSG00000081769.2	Gm12216	ENSMUST00000120776.1	protein_coding	-
chr11_53670935_53673342	chr11	53670935	53673342	ENSMUSG00000081769.2	Gm12216	ENSMUST00000126535.1	processed_transcript	-
chr11_53670935_53673342	chr11	53670935	53673342	ENSMUSG00000081769.2	Gm12216	ENSMUST00000117316.1	protein_coding	-
chr11_53670935_53673342	chr11	53670935	53673342	ENSMUSG00000081769.2	Gm12216	ENSMUST00000135815.1	nonsense_mediated_decay	-
chr11_53704410_53705968	chr11	53704410	53705968	ENSMUSG00000018900.7	Slc22a5	ENSMUST00000136307.1	nonsense_mediated_decay	-
chr11_53704410_53705968	chr11	53704410	53705968	ENSMUSG00000018900.7	Slc22a5	ENSMUST00000019044.7	protein_coding	-
chr11_53716213_53718350	chr11	53716213	53718350	ENSMUSG00000082380.1	Gm12218	ENSMUST00000117666.1	transcribed_processed_pseudogene	-
chr11_53792808_53794216	chr11	53792808	53794216	ENSMUSG00000063652.4	Slc22a21	ENSMUST00000124221.1	nonsense_mediated_decay	-
chr11_53792808_53794216	chr11	53792808	53794216	ENSMUSG00000063652.4	Slc22a21	ENSMUST00000076493.4	protein_coding	-
chr11_53821081_53822340	chr11	53821081	53822340	ENSMUSG00000020334.6	Slc22a4	ENSMUST00000146351.1	processed_transcript	-
chr11_53840709_53842838	chr11	53840709	53842838	ENSMUSG00000020334.6	Slc22a4	ENSMUST00000154369.1	processed_transcript	-
chr11_53840709_53842838	chr11	53840709	53842838	ENSMUSG00000020334.6	Slc22a4	ENSMUST00000020586.6	protein_coding	-
chr11_53877569_53879083	chr11	53877569	53879083	ENSMUSG00000020388.6	Pdlim4	ENSMUST00000151948.1	processed_transcript	-
chr11_53877569_53879083	chr11	53877569	53879083	ENSMUSG00000020388.6	Pdlim4	ENSMUST00000144477.1	protein_coding	-
chr11_53881266_53883047	chr11	53881266	53883047	ENSMUSG00000020388.6	Pdlim4	ENSMUST00000127271.1	retained_intron	-
chr11_53881266_53883047	chr11	53881266	53883047	ENSMUSG00000020388.6	Pdlim4	ENSMUST00000093109.4	protein_coding	-
chr11_53881266_53883047	chr11	53881266	53883047	ENSMUSG00000020388.6	Pdlim4	ENSMUST00000018755.3	protein_coding	-
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000151218.1	protein_coding	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000093107.5	protein_coding	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000125651.1	retained_intron	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000019050.5	protein_coding	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000135596.2	retained_intron	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000174616.1	protein_coding	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000129499.1	protein_coding	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000126840.1	protein_coding	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000125132.1	nonsense_mediated_decay	+
chr11_53913560_53915558	chr11	53913560	53915558	ENSMUSG00000018906.8	P4ha2	ENSMUST00000135653.1	protein_coding	+
chr11_53920031_53921144	chr11	53920031	53921144	ENSMUSG00000018906.8	P4ha2	ENSMUST00000138477.1	protein_coding	+
chr11_53925451_53927353	chr11	53925451	53927353	ENSMUSG00000018906.8	P4ha2	ENSMUST00000155299.1	processed_transcript	+
chr11_54060927_54061275	chr11	54060927	54061275	ENSMUSG00000085585.1	Gm12223	ENSMUST00000135468.1	antisense	+
chr11_54062552_54063084	chr11	54062552	54063084	ENSMUSG00000018916.5	Csf2	ENSMUST00000019060.5	protein_coding	-
chr11_54117238_54118626	chr11	54117238	54118626	ENSMUSG00000020333.10	Acsl6	ENSMUST00000093106.5	protein_coding	+
chr11_54117238_54118626	chr11	54117238	54118626	ENSMUSG00000020333.10	Acsl6	ENSMUST00000000145.5	protein_coding	+
chr11_54117238_54118626	chr11	54117238	54118626	ENSMUSG00000020333.10	Acsl6	ENSMUST00000138515.1	protein_coding	+
chr11_54117238_54118626	chr11	54117238	54118626	ENSMUSG00000020333.10	Acsl6	ENSMUST00000108904.3	protein_coding	+
chr11_54117238_54118626	chr11	54117238	54118626	ENSMUSG00000020333.10	Acsl6	ENSMUST00000108905.3	protein_coding	+
chr11_54126888_54127562	chr11	54126888	54127562	ENSMUSG00000020333.10	Acsl6	ENSMUST00000149403.1	protein_coding	+
chr11_54128276_54128678	chr11	54128276	54128678	ENSMUSG00000020333.10	Acsl6	ENSMUST00000072178.4	protein_coding	+
chr11_54128276_54128678	chr11	54128276	54128678	ENSMUSG00000020333.10	Acsl6	ENSMUST00000101211.2	protein_coding	+
chr11_54128276_54128678	chr11	54128276	54128678	ENSMUSG00000020333.10	Acsl6	ENSMUST00000101213.2	protein_coding	+
chr11_54128276_54128678	chr11	54128276	54128678	ENSMUSG00000020333.10	Acsl6	ENSMUST00000064690.3	protein_coding	+
chr11_54128276_54128678	chr11	54128276	54128678	ENSMUSG00000020333.10	Acsl6	ENSMUST00000108899.1	protein_coding	+
chr11_54133339_54133896	chr11	54133339	54133896	ENSMUSG00000020333.10	Acsl6	ENSMUST00000094194.3	protein_coding	+
chr11_54133339_54133896	chr11	54133339	54133896	ENSMUSG00000020333.10	Acsl6	ENSMUST00000156252.1	protein_coding	+
chr11_54133339_54133896	chr11	54133339	54133896	ENSMUSG00000020333.10	Acsl6	ENSMUST00000108900.2	protein_coding	+
chr11_54166686_54167196	chr11	54166686	54167196	ENSMUSG00000085888.1	Gm12224	ENSMUST00000127107.1	antisense	-
chr11_54166686_54167196	chr11	54166686	54167196	ENSMUSG00000085888.1	Gm12224	ENSMUST00000124047.1	antisense	-
chr11_54183793_54184431	chr11	54183793	54184431	ENSMUSG00000020332.6	4930404A10Rik	ENSMUST00000094193.2	protein_coding	+
chr11_54183793_54184431	chr11	54183793	54184431	ENSMUSG00000020332.6	4930404A10Rik	ENSMUST00000143919.1	retained_intron	+
chr11_54250808_54253316	chr11	54250808	54253316	ENSMUSG00000035992.9	Fnip1	ENSMUST00000046835.7	protein_coding	+
chr11_54271374_54271615	chr11	54271374	54271615	ENSMUSG00000088437.1	U6	ENSMUST00000157812.1	snRNA	+
chr11_54277646_54278768	chr11	54277646	54278768	ENSMUSG00000035992.9	Fnip1	ENSMUST00000143650.1	protein_coding	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000102743.3	protein_coding	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000166868.1	protein_coding	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000155132.1	processed_transcript	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000108895.1	protein_coding	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000101206.3	protein_coding	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000139360.1	processed_transcript	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000041060.8	protein_coding	+
chr11_54335279_54337034	chr11	54335279	54337034	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000050145.6	protein_coding	+
chr11_54409311_54410924	chr11	54409311	54410924	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000149372.1	processed_transcript	+
chr11_54409311_54410924	chr11	54409311	54410924	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000169718.1	protein_coding	+
chr11_54504606_54505412	chr11	54504606	54505412	ENSMUSG00000037533.10	Rapgef6	ENSMUST00000136494.1	protein_coding	+
chr11_54541627_54542434	chr11	54541627	54542434	ENSMUSG00000086039.1	Gm12227	ENSMUST00000147847.1	antisense	+
chr11_54600252_54601812	chr11	54600252	54601812	ENSMUSG00000052298.6	Cdc42se2	ENSMUST00000135903.1	processed_transcript	-
chr11_54600252_54601812	chr11	54600252	54601812	ENSMUSG00000052298.6	Cdc42se2	ENSMUST00000136059.1	processed_transcript	-
chr11_54600252_54601812	chr11	54600252	54601812	ENSMUSG00000052298.6	Cdc42se2	ENSMUST00000153209.1	protein_coding	-
chr11_54600252_54601812	chr11	54600252	54601812	ENSMUSG00000052298.6	Cdc42se2	ENSMUST00000064104.6	protein_coding	-
chr11_54663436_54664412	chr11	54663436	54664412	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000127887.1	retained_intron	-
chr11_54673300_54674723	chr11	54673300	54674723	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000135853.1	retained_intron	-
chr11_54673300_54674723	chr11	54673300	54674723	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000124351.1	processed_transcript	-
chr11_54673300_54674723	chr11	54673300	54674723	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000141703.1	nonsense_mediated_decay	-
chr11_54673300_54674723	chr11	54673300	54674723	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000144164.1	protein_coding	-
chr11_54673300_54674723	chr11	54673300	54674723	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000020506.3	protein_coding	-
chr11_54673300_54674723	chr11	54673300	54674723	ENSMUSG00000020268.6	Lyrm7	ENSMUST00000148070.1	nonsense_mediated_decay	-
chr11_54679488_54681009	chr11	54679488	54681009	ENSMUSG00000020267.6	Hint1	ENSMUST00000020504.5	protein_coding	+
chr11_54679488_54681009	chr11	54679488	54681009	ENSMUSG00000020267.6	Hint1	ENSMUST00000117710.1	protein_coding	+
chr11_54715904_54716825	chr11	54715904	54716825	ENSMUSG00000018339.5	Gpx3	ENSMUST00000125094.1	protein_coding	+
chr11_54715904_54716825	chr11	54715904	54716825	ENSMUSG00000018339.5	Gpx3	ENSMUST00000082430.3	protein_coding	+
chr11_54715904_54716825	chr11	54715904	54716825	ENSMUSG00000018339.5	Gpx3	ENSMUST00000149324.1	protein_coding	+
chr11_54733682_54735085	chr11	54733682	54735085	ENSMUSG00000020400.10	Tnip1	ENSMUST00000132224.1	retained_intron	-
chr11_54761078_54761734	chr11	54761078	54761734	ENSMUSG00000082180.1	Gm12230	ENSMUST00000118301.1	transcribed_processed_pseudogene	+
chr11_54769031_54770160	chr11	54769031	54770160	ENSMUSG00000020400.10	Tnip1	ENSMUST00000151736.1	processed_transcript	-
chr11_54769031_54770160	chr11	54769031	54770160	ENSMUSG00000020400.10	Tnip1	ENSMUST00000155316.1	protein_coding	-
chr11_54769031_54770160	chr11	54769031	54770160	ENSMUSG00000020400.10	Tnip1	ENSMUST00000126703.1	protein_coding	-
chr11_54769031_54770160	chr11	54769031	54770160	ENSMUSG00000020400.10	Tnip1	ENSMUST00000101203.4	protein_coding	-
chr11_54769031_54770160	chr11	54769031	54770160	ENSMUSG00000020400.10	Tnip1	ENSMUST00000108889.2	protein_coding	-
chr11_54769031_54770160	chr11	54769031	54770160	ENSMUSG00000020400.10	Tnip1	ENSMUST00000124304.1	processed_transcript	-
chr11_54776005_54776826	chr11	54776005	54776826	ENSMUSG00000020400.10	Tnip1	ENSMUST00000132776.1	processed_transcript	-
chr11_54776005_54776826	chr11	54776005	54776826	ENSMUSG00000020400.10	Tnip1	ENSMUST00000108885.1	protein_coding	-
chr11_54776005_54776826	chr11	54776005	54776826	ENSMUSG00000020400.10	Tnip1	ENSMUST00000102730.2	protein_coding	-
chr11_54776005_54776826	chr11	54776005	54776826	ENSMUSG00000020400.10	Tnip1	ENSMUST00000018482.6	protein_coding	-
chr11_54776005_54776826	chr11	54776005	54776826	ENSMUSG00000020400.10	Tnip1	ENSMUST00000108886.1	protein_coding	-
chr11_54776005_54776826	chr11	54776005	54776826	ENSMUSG00000020400.10	Tnip1	ENSMUST00000102731.1	protein_coding	-
chr11_54846030_54847466	chr11	54846030	54847466	ENSMUSG00000018340.7	Anxa6	ENSMUST00000148298.1	processed_transcript	-
chr11_54846030_54847466	chr11	54846030	54847466	ENSMUSG00000018340.7	Anxa6	ENSMUST00000108883.3	protein_coding	-
chr11_54846030_54847466	chr11	54846030	54847466	ENSMUSG00000018340.7	Anxa6	ENSMUST00000102727.2	protein_coding	-
chr11_54890557_54892420	chr11	54890557	54892420	ENSMUSG00000049588.7	Ccdc69	ENSMUST00000108880.1	protein_coding	-
chr11_54890557_54892420	chr11	54890557	54892420	ENSMUSG00000049588.7	Ccdc69	ENSMUST00000055040.6	protein_coding	-
chr11_54910349_54912516	chr11	54910349	54912516	ENSMUSG00000000594.7	Gm2a	ENSMUST00000000608.7	protein_coding	+
chr11_54950025_54951110	chr11	54950025	54951110	ENSMUSG00000085531.1	Gm12233	ENSMUST00000155883.1	antisense	+
chr11_54998203_54998755	chr11	54998203	54998755	ENSMUSG00000020264.5	Slc36a2	ENSMUST00000125560.1	processed_transcript	-
chr11_54998203_54998755	chr11	54998203	54998755	ENSMUSG00000020264.5	Slc36a2	ENSMUST00000039305.5	protein_coding	-
chr11_55011035_55011747	chr11	55011035	55011747	ENSMUSG00000084980.1	4921508A21Rik	ENSMUST00000142953.1	antisense	-
chr11_55011035_55011747	chr11	55011035	55011747	ENSMUSG00000084980.1	4921508A21Rik	ENSMUST00000157010.1	antisense	-
chr11_55017420_55018733	chr11	55017420	55018733	ENSMUSG00000020261.9	Slc36a1	ENSMUST00000108872.2	protein_coding	+
chr11_55017420_55018733	chr11	55017420	55018733	ENSMUSG00000020261.9	Slc36a1	ENSMUST00000152336.1	processed_transcript	+
chr11_55017420_55018733	chr11	55017420	55018733	ENSMUSG00000020261.9	Slc36a1	ENSMUST00000147506.1	protein_coding	+
chr11_55017420_55018733	chr11	55017420	55018733	ENSMUSG00000020261.9	Slc36a1	ENSMUST00000020499.7	protein_coding	+
chr11_55027009_55027413	chr11	55027009	55027413	ENSMUSG00000020261.9	Slc36a1	ENSMUST00000108867.1	protein_coding	+
chr11_55149645_55150566	chr11	55149645	55150566	ENSMUSG00000055333.7	Fat2	ENSMUST00000068853.6	protein_coding	-
chr11_55231355_55233928	chr11	55231355	55233928	ENSMUSG00000018593.6	Sparc	ENSMUST00000125787.1	processed_transcript	-
chr11_55231355_55233928	chr11	55231355	55233928	ENSMUSG00000018593.6	Sparc	ENSMUST00000141530.1	protein_coding	-
chr11_55231355_55233928	chr11	55231355	55233928	ENSMUSG00000018593.6	Sparc	ENSMUST00000018737.6	protein_coding	-
chr11_55231355_55233928	chr11	55231355	55233928	ENSMUSG00000018593.6	Sparc	ENSMUST00000108858.1	protein_coding	-
chr11_55273798_55275305	chr11	55273798	55275305	ENSMUSG00000018585.9	Atox1	ENSMUST00000138412.1	processed_transcript	-
chr11_55273798_55275305	chr11	55273798	55275305	ENSMUSG00000018585.9	Atox1	ENSMUST00000108857.1	protein_coding	-
chr11_55281501_55283966	chr11	55281501	55283966	ENSMUSG00000018583.4	G3bp1	ENSMUST00000018727.3	protein_coding	+
chr11_55281501_55283966	chr11	55281501	55283966	ENSMUSG00000018583.4	G3bp1	ENSMUST00000071288.5	protein_coding	+
chr11_55281501_55283966	chr11	55281501	55283966	ENSMUSG00000018583.4	G3bp1	ENSMUST00000151790.1	processed_transcript	+
chr11_55420604_55422389	chr11	55420604	55422389	ENSMUSG00000000263.9	Glra1	ENSMUST00000108853.1	protein_coding	-
chr11_55420604_55422389	chr11	55420604	55422389	ENSMUSG00000000263.9	Glra1	ENSMUST00000102716.3	protein_coding	-
chr11_55420604_55422389	chr11	55420604	55422389	ENSMUSG00000000263.9	Glra1	ENSMUST00000075603.4	protein_coding	-
chr11_55584857_55586542	chr11	55584857	55586542	ENSMUSG00000086020.1	Gm12239	ENSMUST00000134285.1	antisense	+
chr11_56824442_56827332	chr11	56824442	56827332	ENSMUSG00000020524.10	Gria1	ENSMUST00000125292.1	protein_coding	+
chr11_56824442_56827332	chr11	56824442	56827332	ENSMUSG00000020524.10	Gria1	ENSMUST00000036315.9	protein_coding	+
chr11_56824442_56827332	chr11	56824442	56827332	ENSMUSG00000020524.10	Gria1	ENSMUST00000094179.4	protein_coding	+
chr11_56824442_56827332	chr11	56824442	56827332	ENSMUSG00000020524.10	Gria1	ENSMUST00000151045.2	protein_coding	+
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020522.7	Mfap3	ENSMUST00000108849.1	protein_coding	+
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020522.7	Mfap3	ENSMUST00000128971.1	retained_intron	+
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020522.7	Mfap3	ENSMUST00000020830.7	protein_coding	+
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020523.7	Fam114a2	ENSMUST00000130596.1	processed_transcript	-
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020523.7	Fam114a2	ENSMUST00000108850.1	protein_coding	-
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020523.7	Fam114a2	ENSMUST00000020831.6	protein_coding	-
chr11_57331353_57332662	chr11	57331353	57332662	ENSMUSG00000020523.7	Fam114a2	ENSMUST00000169325.1	protein_coding	-
chr11_57335283_57336307	chr11	57335283	57336307	ENSMUSG00000020522.7	Mfap3	ENSMUST00000108848.1	protein_coding	+
chr11_57457693_57459275	chr11	57457693	57459275	ENSMUSG00000020520.8	Galnt10	ENSMUST00000066987.7	protein_coding	+
chr11_57457693_57459275	chr11	57457693	57459275	ENSMUSG00000020520.8	Galnt10	ENSMUST00000108846.1	protein_coding	+
chr11_57554423_57554857	chr11	57554423	57554857	ENSMUSG00000077155.1	U6	ENSMUST00000103967.1	snRNA	+
chr11_57613852_57616306	chr11	57613852	57616306	ENSMUSG00000020519.5	Sap30l	ENSMUST00000020826.5	protein_coding	+
chr11_57613852_57616306	chr11	57613852	57616306	ENSMUSG00000087165.1	2010001A14Rik	ENSMUST00000140069.1	processed_transcript	-
chr11_57613852_57616306	chr11	57613852	57616306	ENSMUSG00000087165.1	2010001A14Rik	ENSMUST00000132378.1	processed_transcript	-
chr11_57613852_57616306	chr11	57613852	57616306	ENSMUSG00000087165.1	2010001A14Rik	ENSMUST00000152790.1	processed_transcript	-
chr11_57786325_57787901	chr11	57786325	57787901	ENSMUSG00000086666.1	Gm12249	ENSMUST00000132323.1	lincRNA	-
chr11_57821455_57824450	chr11	57821455	57824450	ENSMUSG00000037331.8	Larp1	ENSMUST00000071487.6	protein_coding	+
chr11_57910347_57912153	chr11	57910347	57912153	ENSMUSG00000081223.1	Gm12247	ENSMUST00000117585.1	transcribed_processed_pseudogene	-
chr11_57915997_57918451	chr11	57915997	57918451	ENSMUSG00000020515.7	Cnot8	ENSMUST00000020822.5	protein_coding	+
chr11_57915997_57918451	chr11	57915997	57918451	ENSMUSG00000020515.7	Cnot8	ENSMUST00000108843.1	protein_coding	+
chr11_57915997_57918451	chr11	57915997	57918451	ENSMUSG00000020515.7	Cnot8	ENSMUST00000134896.1	protein_coding	+
chr11_57927075_57927779	chr11	57927075	57927779	ENSMUSG00000020515.7	Cnot8	ENSMUST00000133923.1	processed_transcript	+
chr11_57939585_57940617	chr11	57939585	57940617	ENSMUSG00000087629.1	Gm12246	ENSMUST00000129126.1	antisense	+
chr11_57952276_57953528	chr11	57952276	57953528	ENSMUSG00000037275.8	Gemin5	ENSMUST00000134733.1	processed_transcript	-
chr11_57981423_57982483	chr11	57981423	57982483	ENSMUSG00000037275.8	Gemin5	ENSMUST00000035604.6	protein_coding	-
chr11_57981423_57982483	chr11	57981423	57982483	ENSMUSG00000037275.8	Gemin5	ENSMUST00000102711.2	protein_coding	-
chr11_57981423_57982483	chr11	57981423	57982483	ENSMUSG00000037275.8	Gemin5	ENSMUST00000172035.1	protein_coding	-
chr11_57984736_57985710	chr11	57984736	57985710	ENSMUSG00000020514.2	Mrpl22	ENSMUST00000020820.1	protein_coding	+
chr11_57984736_57985710	chr11	57984736	57985710	ENSMUSG00000020514.2	Mrpl22	ENSMUST00000133038.1	processed_transcript	+
chr11_57984736_57985710	chr11	57984736	57985710	ENSMUSG00000020514.2	Mrpl22	ENSMUST00000140997.1	processed_transcript	+
chr11_57996964_57997804	chr11	57996964	57997804	ENSMUSG00000082292.2	Gm12250	ENSMUST00000164282.1	transcribed_processed_pseudogene	+
chr11_58012553_58014276	chr11	58012553	58014276	ENSMUSG00000078853.2	Igtp	ENSMUST00000035266.4	protein_coding	+
chr11_58012553_58014276	chr11	58012553	58014276	ENSMUSG00000078853.2	Igtp	ENSMUST00000094169.4	protein_coding	+
chr11_58012553_58014276	chr11	58012553	58014276	ENSMUSG00000078853.2	Igtp	ENSMUST00000168280.1	protein_coding	+
chr11_58027671_58028573	chr11	58027671	58028573	ENSMUSG00000069874.5	Irgm2	ENSMUST00000108836.1	protein_coding	+
chr11_58028702_58029177	chr11	58028702	58029177	ENSMUSG00000069874.5	Irgm2	ENSMUST00000108836.1	protein_coding	+
chr11_58120271_58121695	chr11	58120271	58121695	ENSMUSG00000037243.10	Zfp692	ENSMUST00000065632.4	protein_coding	+
chr11_58120271_58121695	chr11	58120271	58121695	ENSMUSG00000037243.10	Zfp692	ENSMUST00000153510.2	protein_coding	+
chr11_58120271_58121695	chr11	58120271	58121695	ENSMUSG00000037243.10	Zfp692	ENSMUST00000049353.8	protein_coding	+
chr11_58136094_58137849	chr11	58136094	58137849	ENSMUSG00000087347.1	1700047K16Rik	ENSMUST00000145068.1	processed_transcript	+
chr11_58136094_58137849	chr11	58136094	58137849	ENSMUSG00000049755.8	Zfp672	ENSMUST00000130217.1	processed_transcript	-
chr11_58136094_58137849	chr11	58136094	58137849	ENSMUSG00000049755.8	Zfp672	ENSMUST00000135097.1	processed_transcript	-
chr11_58136094_58137849	chr11	58136094	58137849	ENSMUSG00000049755.8	Zfp672	ENSMUST00000108829.1	protein_coding	-
chr11_58136094_58137849	chr11	58136094	58137849	ENSMUSG00000049755.8	Zfp672	ENSMUST00000057836.5	protein_coding	-
chr11_58136094_58137849	chr11	58136094	58137849	ENSMUSG00000049755.8	Zfp672	ENSMUST00000064786.5	protein_coding	-
chr11_58143350_58144861	chr11	58143350	58144861	ENSMUSG00000013646.10	Sh3bp5l	ENSMUST00000116376.2	protein_coding	+
chr11_58143350_58144861	chr11	58143350	58144861	ENSMUSG00000013646.10	Sh3bp5l	ENSMUST00000163841.1	protein_coding	+
chr11_58143350_58144861	chr11	58143350	58144861	ENSMUSG00000013646.10	Sh3bp5l	ENSMUST00000073128.6	protein_coding	+
chr11_58143350_58144861	chr11	58143350	58144861	ENSMUSG00000013646.10	Sh3bp5l	ENSMUST00000149701.1	processed_transcript	+
chr11_58143350_58144861	chr11	58143350	58144861	ENSMUSG00000013646.10	Sh3bp5l	ENSMUST00000154278.1	processed_transcript	+
chr11_58143350_58144861	chr11	58143350	58144861	ENSMUSG00000053218.2	Gm9900	ENSMUST00000065533.2	protein_coding	-
chr11_58192177_58192688	chr11	58192177	58192688	ENSMUSG00000013643.7	2210415F13Rik	ENSMUST00000013787.4	protein_coding	+
chr11_58192177_58192688	chr11	58192177	58192688	ENSMUSG00000013643.7	2210415F13Rik	ENSMUST00000108826.2	protein_coding	+
chr11_58206641_58206886	chr11	58206641	58206886	ENSMUSG00000084384.2	Gm12251	ENSMUST00000117893.1	transcribed_processed_pseudogene	-
chr11_58206641_58206886	chr11	58206641	58206886	ENSMUSG00000084384.2	Gm12251	ENSMUST00000168449.1	transcribed_processed_pseudogene	-
chr11_58234390_58234761	chr11	58234390	58234761	ENSMUSG00000013653.2	1810065E05Rik	ENSMUST00000013797.2	protein_coding	+
chr11_58266117_58266826	chr11	58266117	58266826	ENSMUSG00000052642.3	4930504O13Rik	ENSMUST00000064614.3	protein_coding	-
chr11_58303906_58304137	chr11	58303906	58304137	ENSMUSG00000050813.3	Olfr332	ENSMUST00000050287.3	protein_coding	-
chr11_58426850_58427591	chr11	58426850	58427591	ENSMUSG00000037145.8	2210407C18Rik	ENSMUST00000126695.1	processed_transcript	-
chr11_58426850_58427591	chr11	58426850	58427591	ENSMUSG00000037145.8	2210407C18Rik	ENSMUST00000048801.7	protein_coding	-
chr11_58439116_58439402	chr11	58439116	58439402	ENSMUSG00000043880.3	Olfr323	ENSMUST00000070804.2	protein_coding	-
chr11_58453782_58454323	chr11	58453782	58454323	ENSMUSG00000037124.6	Trim58	ENSMUST00000075084.4	protein_coding	+
chr11_58546772_58547527	chr11	58546772	58547527	ENSMUSG00000060030.2	Olfr317	ENSMUST00000075607.2	protein_coding	-
chr11_58615161_58616152	chr11	58615161	58616152	ENSMUSG00000049154.5	Fam183b	ENSMUST00000060581.3	protein_coding	-
chr11_58615161_58616152	chr11	58615161	58616152	ENSMUSG00000049154.5	Fam183b	ENSMUST00000094156.4	protein_coding	-
chr11_58660205_58661871	chr11	58660205	58661871	ENSMUSG00000068869.5	Gm12258	ENSMUST00000139337.1	protein_coding	+
chr11_58660205_58661871	chr11	58660205	58661871	ENSMUSG00000068869.5	Gm12258	ENSMUST00000143407.1	processed_transcript	+
chr11_58680395_58681756	chr11	58680395	58681756	ENSMUSG00000020491.8	2810021J22Rik	ENSMUST00000073924.3	protein_coding	+
chr11_58680395_58681756	chr11	58680395	58681756	ENSMUSG00000020491.8	2810021J22Rik	ENSMUST00000093064.4	protein_coding	+
chr11_58680395_58681756	chr11	58680395	58681756	ENSMUSG00000020491.8	2810021J22Rik	ENSMUST00000132570.1	protein_coding	+
chr11_58703131_58703422	chr11	58703131	58703422	ENSMUSG00000087654.1	Gm12256	ENSMUST00000132394.1	antisense	+
chr11_58716936_58718598	chr11	58716936	58718598	ENSMUSG00000086063.1	Gm12257	ENSMUST00000148244.1	antisense	+
chr11_58716936_58718598	chr11	58716936	58718598	ENSMUSG00000037001.9	Zfp39	ENSMUST00000093063.5	protein_coding	-
chr11_58716936_58718598	chr11	58716936	58718598	ENSMUSG00000037001.9	Zfp39	ENSMUST00000102703.1	protein_coding	-
chr11_58730276_58731638	chr11	58730276	58731638	ENSMUSG00000020490.9	Butr1	ENSMUST00000069941.6	protein_coding	+
chr11_58730276_58731638	chr11	58730276	58731638	ENSMUSG00000020490.9	Butr1	ENSMUST00000142499.1	nonsense_mediated_decay	+
chr11_58730276_58731638	chr11	58730276	58731638	ENSMUSG00000020490.9	Butr1	ENSMUST00000108818.2	protein_coding	+
chr11_58730276_58731638	chr11	58730276	58731638	ENSMUSG00000020490.9	Butr1	ENSMUST00000020792.5	protein_coding	+
chr11_58751225_58753177	chr11	58751225	58753177	ENSMUSG00000020496.8	Rnf187	ENSMUST00000094151.5	protein_coding	-
chr11_58761194_58762866	chr11	58761194	58762866	ENSMUSG00000056895.2	Hist3h2ba	ENSMUST00000078267.2	protein_coding	+
chr11_58766966_58768922	chr11	58766966	58768922	ENSMUSG00000036964.8	Trim17	ENSMUST00000047697.5	protein_coding	+
chr11_58766966_58768922	chr11	58766966	58768922	ENSMUSG00000078851.3	Hist3h2a	ENSMUST00000108817.3	protein_coding	+
chr11_58766966_58768922	chr11	58766966	58768922	ENSMUSG00000080712.3	Hist3h2bb-ps	ENSMUST00000117558.1	transcribed_processed_pseudogene	-
chr11_58775071_58775806	chr11	58775071	58775806	ENSMUSG00000080152.4	Gm12260	ENSMUST00000122447.1	transcribed_unprocessed_pseudogene	+
chr11_58777083_58777410	chr11	58777083	58777410	ENSMUSG00000036964.8	Trim17	ENSMUST00000075141.6	protein_coding	+
chr11_58790758_58793570	chr11	58790758	58793570	ENSMUSG00000020455.10	Trim11	ENSMUST00000108809.1	protein_coding	+
chr11_58790758_58793570	chr11	58790758	58793570	ENSMUSG00000020455.10	Trim11	ENSMUST00000108810.3	protein_coding	+
chr11_58790758_58793570	chr11	58790758	58793570	ENSMUSG00000020455.10	Trim11	ENSMUST00000093061.6	protein_coding	+
chr11_58790758_58793570	chr11	58790758	58793570	ENSMUSG00000085379.1	2310058D17Rik	ENSMUST00000131221.1	processed_transcript	-
chr11_58815647_58816537	chr11	58815647	58816537	ENSMUSG00000072902.4	Gm10435	ENSMUST00000162526.1	antisense	+
chr11_58815647_58816537	chr11	58815647	58816537	ENSMUSG00000072902.4	Gm10435	ENSMUST00000101162.3	antisense	+
chr11_58949091_58950113	chr11	58949091	58950113	ENSMUSG00000061462.8	Obscn	ENSMUST00000081658.4	protein_coding	-
chr11_58949091_58950113	chr11	58949091	58950113	ENSMUSG00000061462.8	Obscn	ENSMUST00000020732.4	protein_coding	-
chr11_58949091_58950113	chr11	58949091	58950113	ENSMUSG00000061462.8	Obscn	ENSMUST00000052872.6	protein_coding	-
chr11_58949091_58950113	chr11	58949091	58950113	ENSMUSG00000061462.8	Obscn	ENSMUST00000047441.6	protein_coding	-
chr11_58976052_58978338	chr11	58976052	58978338	ENSMUSG00000049287.5	A230051G13Rik	ENSMUST00000137433.1	protein_coding	-
chr11_58976052_58978338	chr11	58976052	58978338	ENSMUSG00000049287.5	A230051G13Rik	ENSMUST00000069631.2	protein_coding	-
chr11_58976052_58978338	chr11	58976052	58978338	ENSMUSG00000049287.5	A230051G13Rik	ENSMUST00000054523.5	protein_coding	-
chr11_58996103_58998050	chr11	58996103	58998050	ENSMUSG00000043448.6	Gjc2	ENSMUST00000108793.2	protein_coding	-
chr11_58996103_58998050	chr11	58996103	58998050	ENSMUSG00000043448.6	Gjc2	ENSMUST00000108790.1	protein_coding	-
chr11_58996103_58998050	chr11	58996103	58998050	ENSMUSG00000043448.6	Gjc2	ENSMUST00000075445.1	protein_coding	-
chr11_59001288_59001520	chr11	59001288	59001520	ENSMUSG00000020444.12	Guk1	ENSMUST00000170895.2	protein_coding	-
chr11_59004632_59006034	chr11	59004632	59006034	ENSMUSG00000020444.12	Guk1	ENSMUST00000172714.1	protein_coding	-
chr11_59004632_59006034	chr11	59004632	59006034	ENSMUSG00000020444.12	Guk1	ENSMUST00000130815.1	retained_intron	-
chr11_59004632_59006034	chr11	59004632	59006034	ENSMUSG00000020444.12	Guk1	ENSMUST00000170202.2	protein_coding	-
chr11_59004632_59006034	chr11	59004632	59006034	ENSMUSG00000020444.12	Guk1	ENSMUST00000102702.4	protein_coding	-
chr11_59014962_59016547	chr11	59014962	59016547	ENSMUSG00000036860.8	Mrpl55	ENSMUST00000108786.1	protein_coding	+
chr11_59014962_59016547	chr11	59014962	59016547	ENSMUSG00000036860.8	Mrpl55	ENSMUST00000108787.2	protein_coding	+
chr11_59014962_59016547	chr11	59014962	59016547	ENSMUSG00000036860.8	Mrpl55	ENSMUST00000045697.5	protein_coding	+
chr11_59014962_59016547	chr11	59014962	59016547	ENSMUSG00000036860.8	Mrpl55	ENSMUST00000108785.1	protein_coding	+
chr11_59014962_59016547	chr11	59014962	59016547	ENSMUSG00000036860.8	Mrpl55	ENSMUST00000108784.3	protein_coding	+
chr11_59014962_59016547	chr11	59014962	59016547	ENSMUSG00000085882.1	2610507I01Rik	ENSMUST00000154354.1	processed_transcript	-
chr11_59021408_59022371	chr11	59021408	59022371	ENSMUSG00000020441.6	2310033P09Rik	ENSMUST00000020719.6	protein_coding	+
chr11_59021408_59022371	chr11	59021408	59022371	ENSMUSG00000072898.3	Gm10434	ENSMUST00000101158.3	pseudogene	-
chr11_59040683_59042654	chr11	59040683	59042654	ENSMUSG00000048076.8	Arf1	ENSMUST00000061242.7	protein_coding	-
chr11_59040683_59042654	chr11	59040683	59042654	ENSMUSG00000048076.8	Arf1	ENSMUST00000163300.1	protein_coding	-
chr11_59104142_59104746	chr11	59104142	59104746	ENSMUSG00000009900.7	Wnt3a	ENSMUST00000010044.7	protein_coding	-
chr11_59118300_59120923	chr11	59118300	59120923	ENSMUSG00000000126.5	Wnt9a	ENSMUST00000000128.3	protein_coding	+
chr11_59118300_59120923	chr11	59118300	59120923	ENSMUSG00000000126.5	Wnt9a	ENSMUST00000108783.3	protein_coding	+
chr11_59188770_59189434	chr11	59188770	59189434	ENSMUSG00000086910.1	Gm15755	ENSMUST00000133698.1	antisense	+
chr11_59188770_59189434	chr11	59188770	59189434	ENSMUSG00000049291.6	Prss38	ENSMUST00000061481.6	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000036819.8	Jmjd4	ENSMUST00000108777.3	protein_coding	+
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000036819.8	Jmjd4	ENSMUST00000045279.6	protein_coding	+
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000036819.8	Jmjd4	ENSMUST00000147163.1	nonsense_mediated_decay	+
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000036819.8	Jmjd4	ENSMUST00000126158.1	retained_intron	+
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000125846.1	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000150297.1	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000132969.1	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000136436.1	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000156146.1	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000120940.1	protein_coding	-
chr11_59263185_59264502	chr11	59263185	59264502	ENSMUSG00000009894.9	Snap47	ENSMUST00000010038.3	protein_coding	-
chr11_59284929_59286386	chr11	59284929	59286386	ENSMUSG00000054519.7	Zfp867	ENSMUST00000057799.7	protein_coding	-
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000072893.6	4933439C10Rik	ENSMUST00000138763.1	processed_transcript	+
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000072893.6	4933439C10Rik	ENSMUST00000145533.1	processed_transcript	+
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000072893.6	4933439C10Rik	ENSMUST00000123388.1	processed_transcript	+
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000072893.6	4933439C10Rik	ENSMUST00000137442.1	processed_transcript	+
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000072893.6	4933439C10Rik	ENSMUST00000132226.1	processed_transcript	+
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000020472.8	Zkscan17	ENSMUST00000129941.1	processed_transcript	-
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000020472.8	Zkscan17	ENSMUST00000134522.1	processed_transcript	-
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000020472.8	Zkscan17	ENSMUST00000013262.8	protein_coding	-
chr11_59318732_59320749	chr11	59318732	59320749	ENSMUSG00000020472.8	Zkscan17	ENSMUST00000101150.2	protein_coding	-
chr11_59340080_59341123	chr11	59340080	59341123	ENSMUSG00000020472.8	Zkscan17	ENSMUST00000139707.1	processed_transcript	-
chr11_59340080_59341123	chr11	59340080	59341123	ENSMUSG00000020472.8	Zkscan17	ENSMUST00000139093.1	processed_transcript	-
chr11_59354816_59355199	chr11	59354816	59355199	ENSMUSG00000032691.7	Nlrp3	ENSMUST00000079476.3	protein_coding	+
chr11_59355736_59356371	chr11	59355736	59356371	ENSMUSG00000032691.7	Nlrp3	ENSMUST00000101148.2	protein_coding	+
chr11_59355736_59356371	chr11	59355736	59356371	ENSMUSG00000032691.7	Nlrp3	ENSMUST00000108758.1	protein_coding	+
chr11_59355736_59356371	chr11	59355736	59356371	ENSMUSG00000032691.7	Nlrp3	ENSMUST00000101147.2	protein_coding	+
chr11_59355736_59356371	chr11	59355736	59356371	ENSMUSG00000032691.7	Nlrp3	ENSMUST00000149126.1	protein_coding	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000138234.1	processed_transcript	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000072031.6	protein_coding	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000108750.3	protein_coding	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000116370.2	protein_coding	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000116371.1	protein_coding	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000066330.8	protein_coding	+
chr11_59474519_59477085	chr11	59474519	59477085	ENSMUSG00000005417.10	Mprip	ENSMUST00000108751.1	protein_coding	+
chr11_59545204_59546998	chr11	59545204	59546998	ENSMUSG00000005417.10	Mprip	ENSMUST00000132620.1	protein_coding	+
chr11_59545204_59546998	chr11	59545204	59546998	ENSMUSG00000086330.1	1700007J10Rik	ENSMUST00000139530.1	processed_transcript	-
chr11_59553142_59553861	chr11	59553142	59553861	ENSMUSG00000086330.1	1700007J10Rik	ENSMUST00000153431.1	processed_transcript	-
chr11_59593722_59594198	chr11	59593722	59594198	ENSMUSG00000086536.1	Gm12264	ENSMUST00000123949.1	antisense	-
chr11_59599943_59601387	chr11	59599943	59601387	ENSMUSG00000043648.7	Pld6	ENSMUST00000125307.1	protein_coding	-
chr11_59599943_59601387	chr11	59599943	59601387	ENSMUSG00000043648.7	Pld6	ENSMUST00000051493.7	processed_transcript	-
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000087249.1	Gm16062	ENSMUST00000151825.1	antisense	+
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000032633.6	Flcn	ENSMUST00000151453.1	retained_intron	-
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000032633.6	Flcn	ENSMUST00000047706.2	protein_coding	-
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000032633.6	Flcn	ENSMUST00000133647.1	processed_transcript	-
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000032633.6	Flcn	ENSMUST00000091246.4	protein_coding	-
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000032633.6	Flcn	ENSMUST00000148151.1	retained_intron	-
chr11_59622307_59624313	chr11	59622307	59624313	ENSMUSG00000032633.6	Flcn	ENSMUST00000102697.3	protein_coding	-
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000032615.8	Nt5m	ENSMUST00000149076.1	processed_transcript	+
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000032615.8	Nt5m	ENSMUST00000154699.1	processed_transcript	+
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000019373.4	Cops3	ENSMUST00000133652.1	processed_transcript	-
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000019373.4	Cops3	ENSMUST00000141415.1	protein_coding	-
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000019373.4	Cops3	ENSMUST00000130027.1	processed_transcript	-
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000019373.4	Cops3	ENSMUST00000124101.1	processed_transcript	-
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000019373.4	Cops3	ENSMUST00000167192.1	protein_coding	-
chr11_59652379_59653908	chr11	59652379	59653908	ENSMUSG00000019373.4	Cops3	ENSMUST00000019517.3	protein_coding	-
chr11_59660666_59662367	chr11	59660666	59662367	ENSMUSG00000032615.8	Nt5m	ENSMUST00000102695.3	protein_coding	+
chr11_59660666_59662367	chr11	59660666	59662367	ENSMUSG00000032615.8	Nt5m	ENSMUST00000137695.1	processed_transcript	+
chr11_59711560_59712343	chr11	59711560	59712343	ENSMUSG00000084766.1	Gm12714	ENSMUST00000143391.1	lincRNA	+
chr11_59734439_59735372	chr11	59734439	59735372	ENSMUSG00000085551.1	1810063I02Rik	ENSMUST00000130205.1	lincRNA	+
chr11_59761009_59762562	chr11	59761009	59762562	ENSMUSG00000061650.6	Med9	ENSMUST00000081980.6	protein_coding	+
chr11_59761009_59762562	chr11	59761009	59762562	ENSMUSG00000085260.1	1700013G23Rik	ENSMUST00000129175.1	antisense	-
chr11_59761009_59762562	chr11	59761009	59762562	ENSMUSG00000085260.1	1700013G23Rik	ENSMUST00000139794.1	antisense	-
chr11_59761009_59762562	chr11	59761009	59762562	ENSMUSG00000085260.1	1700013G23Rik	ENSMUST00000146334.1	antisense	-
chr11_59777415_59779707	chr11	59777415	59779707	ENSMUSG00000049892.7	Rasd1	ENSMUST00000062405.7	protein_coding	-
chr11_59834694_59834925	chr11	59834694	59834925	ENSMUSG00000000301.9	Pemt	ENSMUST00000143646.1	processed_transcript	-
chr11_59849778_59850941	chr11	59849778	59850941	ENSMUSG00000000301.9	Pemt	ENSMUST00000136660.1	processed_transcript	-
chr11_59849778_59850941	chr11	59849778	59850941	ENSMUSG00000000301.9	Pemt	ENSMUST00000078045.5	protein_coding	-
chr11_59849778_59850941	chr11	59849778	59850941	ENSMUSG00000000301.9	Pemt	ENSMUST00000102692.3	protein_coding	-
chr11_59859025_59860465	chr11	59859025	59860465	ENSMUSG00000000301.9	Pemt	ENSMUST00000133028.1	processed_transcript	-
chr11_59859025_59860465	chr11	59859025	59860465	ENSMUSG00000000301.9	Pemt	ENSMUST00000148512.1	protein_coding	-
chr11_59859025_59860465	chr11	59859025	59860465	ENSMUSG00000000301.9	Pemt	ENSMUST00000102693.2	protein_coding	-
chr11_59859025_59860465	chr11	59859025	59860465	ENSMUSG00000000301.9	Pemt	ENSMUST00000000310.7	protein_coding	-
chr11_59917985_59920682	chr11	59917985	59920682	ENSMUSG00000062115.9	Rai1	ENSMUST00000149770.1	processed_transcript	+
chr11_59917985_59920682	chr11	59917985	59920682	ENSMUSG00000062115.9	Rai1	ENSMUST00000064190.6	protein_coding	+
chr11_59917985_59920682	chr11	59917985	59920682	ENSMUSG00000062115.9	Rai1	ENSMUST00000132012.1	protein_coding	+
chr11_59927443_59929649	chr11	59927443	59929649	ENSMUSG00000051008.5	4930412M03Rik	ENSMUST00000130746.1	lincRNA	-
chr11_59952524_59954173	chr11	59952524	59954173	ENSMUSG00000062115.9	Rai1	ENSMUST00000171108.1	protein_coding	+
chr11_59952524_59954173	chr11	59952524	59954173	ENSMUSG00000062115.9	Rai1	ENSMUST00000090806.4	protein_coding	+
chr11_59952524_59954173	chr11	59952524	59954173	ENSMUSG00000062115.9	Rai1	ENSMUST00000156902.1	processed_transcript	+
chr11_59988748_59991540	chr11	59988748	59991540	ENSMUSG00000062115.9	Rai1	ENSMUST00000102688.1	protein_coding	+
chr11_60016352_60016879	chr11	60016352	60016879	ENSMUSG00000020538.8	Srebf1	ENSMUST00000136426.1	processed_transcript	-
chr11_60017527_60017727	chr11	60017527	60017727	ENSMUSG00000020538.8	Srebf1	ENSMUST00000149238.1	processed_transcript	-
chr11_60017527_60017727	chr11	60017527	60017727	ENSMUSG00000020538.8	Srebf1	ENSMUST00000154925.1	processed_transcript	-
chr11_60022321_60024693	chr11	60022321	60024693	ENSMUSG00000020538.8	Srebf1	ENSMUST00000147967.1	processed_transcript	-
chr11_60022321_60024693	chr11	60022321	60024693	ENSMUSG00000020538.8	Srebf1	ENSMUST00000144942.1	protein_coding	-
chr11_60022321_60024693	chr11	60022321	60024693	ENSMUSG00000020538.8	Srebf1	ENSMUST00000064158.6	protein_coding	-
chr11_60033178_60034562	chr11	60033178	60034562	ENSMUSG00000020538.8	Srebf1	ENSMUST00000020846.1	protein_coding	-
chr11_60033178_60034562	chr11	60033178	60034562	ENSMUSG00000020538.8	Srebf1	ENSMUST00000108737.1	protein_coding	-
chr11_60035809_60036894	chr11	60035809	60036894	ENSMUSG00000020538.8	Srebf1	ENSMUST00000136215.1	processed_transcript	-
chr11_60044869_60045214	chr11	60044869	60045214	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000151284.1	processed_transcript	-
chr11_60053948_60055603	chr11	60053948	60055603	ENSMUSG00000085132.1	Gm12265	ENSMUST00000139025.1	antisense	+
chr11_60057867_60059337	chr11	60057867	60059337	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000143124.1	protein_coding	-
chr11_60057867_60059337	chr11	60057867	60059337	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000133420.1	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000056598.9	Lrrc48	ENSMUST00000108722.3	protein_coding	+
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000056598.9	Lrrc48	ENSMUST00000070805.6	protein_coding	+
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000056598.9	Lrrc48	ENSMUST00000094140.2	protein_coding	+
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000056598.9	Lrrc48	ENSMUST00000108723.2	protein_coding	+
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000056598.9	Lrrc48	ENSMUST00000128905.1	processed_transcript	+
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000063998.7	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000142225.1	nonsense_mediated_decay	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000102682.4	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000064019.8	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000102683.4	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000093048.6	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000093046.6	protein_coding	-
chr11_60164905_60167031	chr11	60164905	60167031	ENSMUSG00000000538.11	Tom1l2	ENSMUST00000095254.5	protein_coding	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000018415.8	4933439F18Rik	ENSMUST00000139477.1	nonsense_mediated_decay	+
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000018415.8	4933439F18Rik	ENSMUST00000070681.6	protein_coding	+
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000156966.1	processed_transcript	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000141987.1	processed_transcript	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000154387.1	processed_transcript	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000138696.1	processed_transcript	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000145532.1	processed_transcript	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000045675.5	protein_coding	-
chr11_60230048_60231791	chr11	60230048	60231791	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000108721.1	protein_coding	-
chr11_60231901_60232169	chr11	60231901	60232169	ENSMUSG00000042709.7	Atpaf2	ENSMUST00000141987.1	processed_transcript	-
chr11_60267552_60268824	chr11	60267552	60268824	ENSMUSG00000020537.3	Drg2	ENSMUST00000138713.1	retained_intron	+
chr11_60267552_60268824	chr11	60267552	60268824	ENSMUSG00000020537.3	Drg2	ENSMUST00000018568.3	protein_coding	+
chr11_60267552_60268824	chr11	60267552	60268824	ENSMUSG00000020537.3	Drg2	ENSMUST00000147745.1	retained_intron	+
chr11_60322442_60322923	chr11	60322442	60322923	ENSMUSG00000042678.10	Myo15	ENSMUST00000122825.1	retained_intron	+
chr11_60322987_60323392	chr11	60322987	60323392	ENSMUSG00000042678.10	Myo15	ENSMUST00000122825.1	retained_intron	+
chr11_60350007_60352734	chr11	60350007	60352734	ENSMUSG00000042650.3	Alkbh5	ENSMUST00000134770.1	processed_transcript	+
chr11_60350007_60352734	chr11	60350007	60352734	ENSMUSG00000042650.3	Alkbh5	ENSMUST00000044250.3	protein_coding	+
chr11_60385485_60385685	chr11	60385485	60385685	ENSMUSG00000084273.1	Gm12628	ENSMUST00000122193.1	transcribed_unprocessed_pseudogene	-
chr11_60512027_60513728	chr11	60512027	60513728	ENSMUSG00000020536.6	Llgl1	ENSMUST00000052346.3	protein_coding	+
chr11_60512027_60513728	chr11	60512027	60513728	ENSMUSG00000020536.6	Llgl1	ENSMUST00000108719.3	protein_coding	+
chr11_60517359_60517683	chr11	60517359	60517683	ENSMUSG00000020536.6	Llgl1	ENSMUST00000128749.1	retained_intron	+
chr11_60533514_60533739	chr11	60533514	60533739	ENSMUSG00000002812.4	Flii	ENSMUST00000154465.1	retained_intron	-
chr11_60540036_60543271	chr11	60540036	60543271	ENSMUSG00000018599.5	Smcr7	ENSMUST00000018743.4	protein_coding	+
chr11_60540036_60543271	chr11	60540036	60543271	ENSMUSG00000018599.5	Smcr7	ENSMUST00000154890.1	retained_intron	+
chr11_60540036_60543271	chr11	60540036	60543271	ENSMUSG00000018599.5	Smcr7	ENSMUST00000146159.1	processed_transcript	+
chr11_60540036_60543271	chr11	60540036	60543271	ENSMUSG00000092734.1	AL596215.1	ENSMUST00000174993.1	miRNA	+
chr11_60540036_60543271	chr11	60540036	60543271	ENSMUSG00000002812.4	Flii	ENSMUST00000137226.1	retained_intron	-
chr11_60540036_60543271	chr11	60540036	60543271	ENSMUSG00000002812.4	Flii	ENSMUST00000002889.4	protein_coding	-
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000049323.7	Smcr8	ENSMUST00000056907.6	protein_coding	+
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000049323.7	Smcr8	ENSMUST00000102667.3	protein_coding	+
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000002814.8	Top3a	ENSMUST00000130068.1	protein_coding	-
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000002814.8	Top3a	ENSMUST00000120417.1	protein_coding	-
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000002814.8	Top3a	ENSMUST00000101115.3	protein_coding	-
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000002814.8	Top3a	ENSMUST00000102668.3	protein_coding	-
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000002814.8	Top3a	ENSMUST00000117743.1	protein_coding	-
chr11_60589984_60591576	chr11	60589984	60591576	ENSMUSG00000002814.8	Top3a	ENSMUST00000002891.4	protein_coding	-
chr11_60623581_60625240	chr11	60623581	60625240	ENSMUSG00000020534.8	Shmt1	ENSMUST00000172659.1	processed_transcript	-
chr11_60623581_60625240	chr11	60623581	60625240	ENSMUSG00000020534.8	Shmt1	ENSMUST00000173260.1	retained_intron	-
chr11_60623581_60625240	chr11	60623581	60625240	ENSMUSG00000020534.8	Shmt1	ENSMUST00000018744.8	protein_coding	-
chr11_60629875_60630368	chr11	60629875	60630368	ENSMUSG00000081578.1	Gm12611	ENSMUST00000119452.1	transcribed_processed_pseudogene	+
chr11_60643711_60644895	chr11	60643711	60644895	ENSMUSG00000042569.7	Dhrs7b	ENSMUST00000042281.7	protein_coding	+
chr11_60643711_60644895	chr11	60643711	60644895	ENSMUSG00000042569.7	Dhrs7b	ENSMUST00000108718.1	protein_coding	+
chr11_60691535_60693400	chr11	60691535	60693400	ENSMUSG00000091753.1	Gm17432	ENSMUST00000166301.1	lincRNA	+
chr11_60691535_60693400	chr11	60691535	60693400	ENSMUSG00000043284.6	Tmem11	ENSMUST00000155031.1	protein_coding	-
chr11_60691535_60693400	chr11	60691535	60693400	ENSMUSG00000043284.6	Tmem11	ENSMUST00000062677.5	protein_coding	-
chr11_60691535_60693400	chr11	60691535	60693400	ENSMUSG00000043284.6	Tmem11	ENSMUST00000168218.1	protein_coding	-
chr11_60725973_60728180	chr11	60725973	60728180	ENSMUSG00000018931.3	Gm16515	ENSMUST00000143800.1	processed_transcript	-
chr11_60725973_60728180	chr11	60725973	60728180	ENSMUSG00000018931.3	Gm16515	ENSMUST00000019075.3	protein_coding	-
chr11_60728239_60728527	chr11	60728239	60728527	ENSMUSG00000018931.3	Gm16515	ENSMUST00000143800.1	processed_transcript	-
chr11_60744161_60746488	chr11	60744161	60746488	ENSMUSG00000018932.3	Map2k3	ENSMUST00000019076.3	protein_coding	+
chr11_60744161_60746488	chr11	60744161	60746488	ENSMUSG00000018932.3	Map2k3	ENSMUST00000145828.1	retained_intron	+
chr11_60744161_60746488	chr11	60744161	60746488	ENSMUSG00000018932.3	Map2k3	ENSMUST00000137739.1	retained_intron	+
chr11_60744161_60746488	chr11	60744161	60746488	ENSMUSG00000018932.3	Map2k3	ENSMUST00000130269.1	nonsense_mediated_decay	+
chr11_60744161_60746488	chr11	60744161	60746488	ENSMUSG00000042549.10	Gm16516	ENSMUST00000123544.1	antisense	-
chr11_60754617_60756522	chr11	60754617	60756522	ENSMUSG00000018932.3	Map2k3	ENSMUST00000126043.1	processed_transcript	+
chr11_60835002_60837184	chr11	60835002	60837184	ENSMUSG00000042529.8	Kcnj12	ENSMUST00000089184.4	protein_coding	+
chr11_60939856_60940455	chr11	60939856	60940455	ENSMUSG00000010142.6	Tnfrsf13b	ENSMUST00000010286.1	protein_coding	+
chr11_60939856_60940455	chr11	60939856	60940455	ENSMUSG00000010142.6	Tnfrsf13b	ENSMUST00000146033.1	protein_coding	+
chr11_60939856_60940455	chr11	60939856	60940455	ENSMUSG00000010142.6	Tnfrsf13b	ENSMUST00000139422.1	protein_coding	+
chr11_60955710_60957004	chr11	60955710	60957004	ENSMUSG00000010142.6	Tnfrsf13b	ENSMUST00000137832.1	processed_transcript	+
chr11_60955710_60957004	chr11	60955710	60957004	ENSMUSG00000010142.6	Tnfrsf13b	ENSMUST00000130708.1	processed_transcript	+
chr11_60955710_60957004	chr11	60955710	60957004	ENSMUSG00000010142.6	Tnfrsf13b	ENSMUST00000123378.1	processed_transcript	+
chr11_60987598_60989231	chr11	60987598	60989231	ENSMUSG00000042506.9	Usp22	ENSMUST00000174220.1	retained_intron	-
chr11_60987598_60989231	chr11	60987598	60989231	ENSMUSG00000042506.9	Usp22	ENSMUST00000041683.8	protein_coding	-
chr11_61019678_61020029	chr11	61019678	61020029	ENSMUSG00000082626.1	Gm12270	ENSMUST00000117939.1	transcribed_processed_pseudogene	-
chr11_61020930_61021832	chr11	61020930	61021832	ENSMUSG00000019102.4	Aldh3a1	ENSMUST00000147792.1	protein_coding	+
chr11_61021936_61022268	chr11	61021936	61022268	ENSMUSG00000019102.4	Aldh3a1	ENSMUST00000108716.1	protein_coding	+
chr11_61021936_61022268	chr11	61021936	61022268	ENSMUSG00000019102.4	Aldh3a1	ENSMUST00000019246.3	protein_coding	+
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000149298.1	processed_transcript	-
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000128991.1	processed_transcript	-
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000147291.1	processed_transcript	-
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000108715.2	protein_coding	-
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000074127.7	protein_coding	-
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000066277.3	protein_coding	-
chr11_61079963_61081471	chr11	61079963	61081471	ENSMUSG00000010025.11	Aldh3a2	ENSMUST00000071413.4	protein_coding	-
chr11_61155612_61156865	chr11	61155612	61156865	ENSMUSG00000069855.3	Slc47a2	ENSMUST00000147450.1	processed_transcript	-
chr11_61155612_61156865	chr11	61155612	61156865	ENSMUSG00000069855.3	Slc47a2	ENSMUST00000134423.1	protein_coding	-
chr11_61155612_61156865	chr11	61155612	61156865	ENSMUSG00000069855.3	Slc47a2	ENSMUST00000093029.2	protein_coding	-
chr11_61179578_61180926	chr11	61179578	61180926	ENSMUSG00000010122.7	Slc47a1	ENSMUST00000056789.6	protein_coding	-
chr11_61191000_61192930	chr11	61191000	61192930	ENSMUSG00000010122.7	Slc47a1	ENSMUST00000148671.1	protein_coding	-
chr11_61191000_61192930	chr11	61191000	61192930	ENSMUSG00000010122.7	Slc47a1	ENSMUST00000131723.1	nonsense_mediated_decay	-
chr11_61191000_61192930	chr11	61191000	61192930	ENSMUSG00000010122.7	Slc47a1	ENSMUST00000010267.3	protein_coding	-
chr11_61191000_61192930	chr11	61191000	61192930	ENSMUSG00000010122.7	Slc47a1	ENSMUST00000093028.2	protein_coding	-
chr11_61230059_61230529	chr11	61230059	61230529	ENSMUSG00000082032.1	Gm12271	ENSMUST00000121719.1	transcribed_processed_pseudogene	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000130648.1	processed_transcript	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000136966.1	processed_transcript	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000126859.1	processed_transcript	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000152137.1	processed_transcript	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000058348.7	protein_coding	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000060255.7	protein_coding	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000054927.7	protein_coding	-
chr11_61265847_61267902	chr11	61265847	61267902	ENSMUSG00000010086.10	Rnf112	ENSMUST00000102661.3	protein_coding	-
chr11_61297704_61299069	chr11	61297704	61299069	ENSMUSG00000042436.6	Mfap4	ENSMUST00000064783.3	protein_coding	+
chr11_61297704_61299069	chr11	61297704	61299069	ENSMUSG00000042436.6	Mfap4	ENSMUST00000040522.6	protein_coding	+
chr11_61297704_61299069	chr11	61297704	61299069	ENSMUSG00000042436.6	Mfap4	ENSMUST00000127073.1	processed_transcript	+
chr11_61297704_61299069	chr11	61297704	61299069	ENSMUSG00000042436.6	Mfap4	ENSMUST00000126308.1	processed_transcript	+
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000140779.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000139932.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000123360.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000135521.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000139663.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000129272.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000126495.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000101086.4	protein_coding	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000152755.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000101085.2	protein_coding	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000128478.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000125840.1	processed_transcript	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000079080.6	protein_coding	-
chr11_61306753_61308649	chr11	61306753	61308649	ENSMUSG00000001034.10	Mapk7	ENSMUST00000108714.1	protein_coding	-
chr11_61317871_61319350	chr11	61317871	61319350	ENSMUSG00000001039.5	B9d1	ENSMUST00000102657.3	protein_coding	+
chr11_61317871_61319350	chr11	61317871	61319350	ENSMUSG00000001039.5	B9d1	ENSMUST00000001066.3	protein_coding	+
chr11_61317871_61319350	chr11	61317871	61319350	ENSMUSG00000001039.5	B9d1	ENSMUST00000140548.1	processed_transcript	+
chr11_61317871_61319350	chr11	61317871	61319350	ENSMUSG00000001039.5	B9d1	ENSMUST00000138057.1	processed_transcript	+
chr11_61317871_61319350	chr11	61317871	61319350	ENSMUSG00000001039.5	B9d1	ENSMUST00000155176.1	processed_transcript	+
chr11_61317871_61319350	chr11	61317871	61319350	ENSMUSG00000060808.4	3110043A19Rik	ENSMUST00000137010.1	antisense	-
chr11_61357432_61357780	chr11	61357432	61357780	ENSMUSG00000001036.10	Epn2	ENSMUST00000153984.1	protein_coding	-
chr11_61358963_61360519	chr11	61358963	61360519	ENSMUSG00000001036.10	Epn2	ENSMUST00000151545.1	retained_intron	-
chr11_61358963_61360519	chr11	61358963	61360519	ENSMUSG00000001036.10	Epn2	ENSMUST00000148956.1	protein_coding	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000137525.1	processed_transcript	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000141335.1	processed_transcript	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000146455.1	protein_coding	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000147501.1	protein_coding	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000108711.1	protein_coding	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000108712.1	protein_coding	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000001063.8	protein_coding	-
chr11_61391719_61393661	chr11	61391719	61393661	ENSMUSG00000001036.10	Epn2	ENSMUST00000108713.1	protein_coding	-
chr11_61466285_61467113	chr11	61466285	61467113	ENSMUSG00000004837.2	Grap	ENSMUST00000004959.2	protein_coding	+
chr11_61497165_61498288	chr11	61497165	61498288	ENSMUSG00000042377.8	Fam83g	ENSMUST00000070453.1	processed_transcript	+
chr11_61497165_61498288	chr11	61497165	61498288	ENSMUSG00000042377.8	Fam83g	ENSMUST00000093019.5	protein_coding	+
chr11_61533352_61533837	chr11	61533352	61533837	ENSMUSG00000042371.6	Slc5a10	ENSMUST00000148584.1	protein_coding	-
chr11_61533352_61533837	chr11	61533352	61533837	ENSMUSG00000042371.6	Slc5a10	ENSMUST00000151780.1	protein_coding	-
chr11_61534120_61534616	chr11	61534120	61534616	ENSMUSG00000042371.6	Slc5a10	ENSMUST00000051552.4	protein_coding	-
chr11_61534120_61534616	chr11	61534120	61534616	ENSMUSG00000042371.6	Slc5a10	ENSMUST00000128196.1	processed_transcript	-
chr11_61574669_61576147	chr11	61574669	61576147	ENSMUSG00000020528.8	Prpsap2	ENSMUST00000123575.1	processed_transcript	-
chr11_61574669_61576147	chr11	61574669	61576147	ENSMUSG00000020528.8	Prpsap2	ENSMUST00000151966.1	processed_transcript	-
chr11_61574669_61576147	chr11	61574669	61576147	ENSMUSG00000020528.8	Prpsap2	ENSMUST00000004955.7	protein_coding	-
chr11_61574669_61576147	chr11	61574669	61576147	ENSMUSG00000020528.8	Prpsap2	ENSMUST00000168115.1	protein_coding	-
chr11_61667445_61669453	chr11	61667445	61669453	ENSMUSG00000004798.8	Ulk2	ENSMUST00000129025.1	processed_transcript	-
chr11_61667445_61669453	chr11	61667445	61669453	ENSMUSG00000004798.8	Ulk2	ENSMUST00000004920.3	protein_coding	-
chr11_61742863_61745038	chr11	61742863	61745038	ENSMUSG00000047804.8	Akap10	ENSMUST00000143952.1	processed_transcript	-
chr11_61742863_61745038	chr11	61742863	61745038	ENSMUSG00000047804.8	Akap10	ENSMUST00000163117.1	protein_coding	-
chr11_61742863_61745038	chr11	61742863	61745038	ENSMUSG00000047804.8	Akap10	ENSMUST00000108710.1	protein_coding	-
chr11_61742863_61745038	chr11	61742863	61745038	ENSMUSG00000047804.8	Akap10	ENSMUST00000102650.3	protein_coding	-
chr11_61763632_61764841	chr11	61763632	61764841	ENSMUSG00000084805.1	Gm12273	ENSMUST00000137418.1	lincRNA	+
chr11_61770024_61771582	chr11	61770024	61771582	ENSMUSG00000042331.7	Specc1	ENSMUST00000049836.7	protein_coding	+
chr11_61770024_61771582	chr11	61770024	61771582	ENSMUSG00000042331.7	Specc1	ENSMUST00000136971.1	processed_transcript	+
chr11_61787559_61787956	chr11	61787559	61787956	ENSMUSG00000083212.2	Gm12274	ENSMUST00000120062.1	transcribed_processed_pseudogene	-
chr11_61787559_61787956	chr11	61787559	61787956	ENSMUSG00000083212.2	Gm12274	ENSMUST00000166491.1	retrotransposed	-
chr11_61889741_61891352	chr11	61889741	61891352	ENSMUSG00000042331.7	Specc1	ENSMUST00000092415.5	protein_coding	+
chr11_62061586_62063675	chr11	62061586	62063675	ENSMUSG00000018500.2	Adora2b	ENSMUST00000018644.2	protein_coding	+
chr11_62094085_62095853	chr11	62094085	62095853	ENSMUSG00000042298.11	Ttc19	ENSMUST00000136477.1	processed_transcript	+
chr11_62094085_62095853	chr11	62094085	62095853	ENSMUSG00000042298.11	Ttc19	ENSMUST00000037997.7	protein_coding	+
chr11_62094085_62095853	chr11	62094085	62095853	ENSMUSG00000042298.11	Ttc19	ENSMUST00000101075.4	protein_coding	+
chr11_62094085_62095853	chr11	62094085	62095853	ENSMUSG00000042298.11	Ttc19	ENSMUST00000050646.6	protein_coding	+
chr11_62094085_62095853	chr11	62094085	62095853	ENSMUSG00000014243.5	Zswim7	ENSMUST00000072916.4	protein_coding	-
chr11_62118793_62120074	chr11	62118793	62120074	ENSMUSG00000081340.1	Gm12275	ENSMUST00000119805.1	transcribed_processed_pseudogene	-
chr11_62144094_62144525	chr11	62144094	62144525	ENSMUSG00000018501.10	Ncor1	ENSMUST00000161281.1	retained_intron	-
chr11_62173233_62173460	chr11	62173233	62173460	ENSMUSG00000018501.10	Ncor1	ENSMUST00000037575.7	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000014245.6	Pigl	ENSMUST00000145334.1	nonsense_mediated_decay	+
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000014245.6	Pigl	ENSMUST00000014389.5	protein_coding	+
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000014245.6	Pigl	ENSMUST00000167701.1	protein_coding	+
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000014245.6	Pigl	ENSMUST00000147918.1	processed_transcript	+
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000141447.1	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000069456.4	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000164085.1	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000127471.2	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000101069.3	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000108708.1	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000166761.1	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000101066.2	protein_coding	-
chr11_62269963_62272586	chr11	62269963	62272586	ENSMUSG00000018501.10	Ncor1	ENSMUST00000018645.6	protein_coding	-
chr11_62351218_62353278	chr11	62351218	62353278	ENSMUSG00000018509.2	Cenpv	ENSMUST00000138772.1	processed_transcript	-
chr11_62351218_62353278	chr11	62351218	62353278	ENSMUSG00000018509.2	Cenpv	ENSMUST00000123181.1	nonsense_mediated_decay	-
chr11_62351218_62353278	chr11	62351218	62353278	ENSMUSG00000018509.2	Cenpv	ENSMUST00000156349.1	processed_transcript	-
chr11_62351218_62353278	chr11	62351218	62353278	ENSMUSG00000018509.2	Cenpv	ENSMUST00000123542.1	processed_transcript	-
chr11_62351218_62353278	chr11	62351218	62353278	ENSMUSG00000018509.2	Cenpv	ENSMUST00000018653.1	protein_coding	-
chr11_62363148_62365391	chr11	62363148	62365391	ENSMUSG00000019505.6	Ubb	ENSMUST00000019649.3	protein_coding	+
chr11_62363148_62365391	chr11	62363148	62365391	ENSMUSG00000019505.6	Ubb	ENSMUST00000168766.1	protein_coding	+
chr11_62363148_62365391	chr11	62363148	62365391	ENSMUSG00000019505.6	Ubb	ENSMUST00000136938.1	protein_coding	+
chr11_62363148_62365391	chr11	62363148	62365391	ENSMUSG00000087120.1	Gm12279	ENSMUST00000142533.1	antisense	-
chr11_62379372_62379853	chr11	62379372	62379853	ENSMUSG00000085748.1	Gm12280	ENSMUST00000155836.1	antisense	-
chr11_62379968_62380194	chr11	62379968	62380194	ENSMUSG00000085748.1	Gm12280	ENSMUST00000155836.1	antisense	-
chr11_62387732_62388564	chr11	62387732	62388564	ENSMUSG00000018507.10	Trpv2	ENSMUST00000151195.1	processed_transcript	+
chr11_62387732_62388564	chr11	62387732	62388564	ENSMUSG00000018507.10	Trpv2	ENSMUST00000018651.7	protein_coding	+
chr11_62388641_62390670	chr11	62388641	62390670	ENSMUSG00000018507.10	Trpv2	ENSMUST00000130569.1	processed_transcript	+
chr11_62388641_62390670	chr11	62388641	62390670	ENSMUSG00000018507.10	Trpv2	ENSMUST00000102643.1	protein_coding	+
chr11_62415670_62417452	chr11	62415670	62417452	ENSMUSG00000086841.1	2410006H16Rik	ENSMUST00000131787.1	processed_transcript	+
chr11_62415670_62417452	chr11	62415670	62417452	ENSMUSG00000064437.1	Snord49b	ENSMUST00000082503.1	snoRNA	+
chr11_62415670_62417452	chr11	62415670	62417452	ENSMUSG00000065734.1	Snord49a	ENSMUST00000083800.1	snoRNA	+
chr11_62448135_62448627	chr11	62448135	62448627	ENSMUSG00000085170.1	4930557C09Rik	ENSMUST00000142492.1	antisense	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000062860.4	protein_coding	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000148707.1	retained_intron	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000148696.1	processed_transcript	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000142112.1	processed_transcript	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000127589.1	protein_coding	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000155759.2	protein_coding	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000048497.5	Mmgt2	ENSMUST00000129162.2	protein_coding	+
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000046417.8	BC046404	ENSMUST00000143262.1	processed_transcript	-
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000046417.8	BC046404	ENSMUST00000128705.1	processed_transcript	-
chr11_62460134_62462938	chr11	62460134	62462938	ENSMUSG00000046417.8	BC046404	ENSMUST00000057194.8	protein_coding	-
chr11_62544658_62545992	chr11	62544658	62545992	ENSMUSG00000005267.6	Zfp287	ENSMUST00000127732.1	retained_intron	-
chr11_62544658_62545992	chr11	62544658	62545992	ENSMUSG00000005267.6	Zfp287	ENSMUST00000150336.1	protein_coding	-
chr11_62574329_62575911	chr11	62574329	62575911	ENSMUSG00000086674.1	Gm12283	ENSMUST00000128292.1	antisense	+
chr11_62589756_62590742	chr11	62589756	62590742	ENSMUSG00000064692.1	SNORA67	ENSMUST00000082758.1	snoRNA	+
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000149215.1	processed_transcript	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000145474.1	processed_transcript	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000140072.1	processed_transcript	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000152602.1	processed_transcript	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000108705.1	protein_coding	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000163136.1	protein_coding	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000054654.6	protein_coding	-
chr11_62602198_62603523	chr11	62602198	62603523	ENSMUSG00000047342.9	Zfp286	ENSMUST00000139798.1	processed_transcript	-
chr11_62633486_62634971	chr11	62633486	62634971	ENSMUSG00000047821.8	Trim16	ENSMUST00000055006.5	protein_coding	+
chr11_62633486_62634971	chr11	62633486	62634971	ENSMUSG00000047821.8	Trim16	ENSMUST00000072639.2	protein_coding	+
chr11_62633486_62634971	chr11	62633486	62634971	ENSMUSG00000047821.8	Trim16	ENSMUST00000147942.1	processed_transcript	+
chr11_62633486_62634971	chr11	62633486	62634971	ENSMUSG00000047821.8	Trim16	ENSMUST00000108703.1	protein_coding	+
chr11_62633486_62634971	chr11	62633486	62634971	ENSMUSG00000047821.8	Trim16	ENSMUST00000108704.2	protein_coding	+
chr11_62660218_62661677	chr11	62660218	62661677	ENSMUSG00000090173.1	Fbxw10	ENSMUST00000036085.4	protein_coding	+
chr11_62660218_62661677	chr11	62660218	62661677	ENSMUSG00000090173.1	Fbxw10	ENSMUST00000150989.1	protein_coding	+
chr11_62692062_62693680	chr11	62692062	62693680	ENSMUSG00000014177.4	Fam18b	ENSMUST00000014321.4	protein_coding	+
chr11_62692062_62693680	chr11	62692062	62693680	ENSMUSG00000014177.4	Fam18b	ENSMUST00000128698.1	processed_transcript	+
chr11_62692062_62693680	chr11	62692062	62693680	ENSMUSG00000014177.4	Fam18b	ENSMUST00000154176.1	processed_transcript	+
chr11_62734336_62735771	chr11	62734336	62735771	ENSMUSG00000086677.1	Gm12284	ENSMUST00000148598.1	antisense	-
chr11_62764571_62764793	chr11	62764571	62764793	ENSMUSG00000042200.3	Cdrt4	ENSMUST00000035854.3	protein_coding	+
chr11_62764571_62764793	chr11	62764571	62764793	ENSMUSG00000087039.1	Gm14526	ENSMUST00000128675.1	antisense	-
chr11_62817445_62817696	chr11	62817445	62817696	ENSMUSG00000087604.1	4930452L02Rik	ENSMUST00000130177.1	antisense	-
chr11_62817445_62817696	chr11	62817445	62817696	ENSMUSG00000087604.1	4930452L02Rik	ENSMUST00000153180.1	antisense	-
chr11_62874944_62875427	chr11	62874944	62875427	ENSMUSG00000042189.5	Tekt3	ENSMUST00000035732.4	protein_coding	+
chr11_62942334_62942611	chr11	62942334	62942611	ENSMUSG00000018217.6	Pmp22	ENSMUST00000108702.1	protein_coding	+
chr11_62943887_62945167	chr11	62943887	62945167	ENSMUSG00000018217.6	Pmp22	ENSMUST00000018361.3	protein_coding	+
chr11_62945810_62946868	chr11	62945810	62946868	ENSMUSG00000018217.6	Pmp22	ENSMUST00000108701.1	protein_coding	+
chr11_62945810_62946868	chr11	62945810	62946868	ENSMUSG00000018217.6	Pmp22	ENSMUST00000140648.1	processed_transcript	+
chr11_62945810_62946868	chr11	62945810	62946868	ENSMUSG00000018217.6	Pmp22	ENSMUST00000108700.1	protein_coding	+
chr11_62987149_62987439	chr11	62987149	62987439	ENSMUSG00000085532.1	B430319H21Rik	ENSMUST00000123420.1	lincRNA	+
chr11_63226689_63226915	chr11	63226689	63226915	ENSMUSG00000085113.1	B130011K05Rik	ENSMUST00000151765.1	lincRNA	+
chr11_63735316_63736200	chr11	63735316	63736200	ENSMUSG00000070407.5	Hs3st3b1	ENSMUST00000094103.3	protein_coding	-
chr11_63892462_63893808	chr11	63892462	63893808	ENSMUSG00000087497.1	2810001G20Rik	ENSMUST00000135037.1	processed_transcript	+
chr11_63892462_63893808	chr11	63892462	63893808	ENSMUSG00000087497.1	2810001G20Rik	ENSMUST00000146333.1	processed_transcript	+
chr11_63892462_63893808	chr11	63892462	63893808	ENSMUSG00000042148.8	Cox10	ENSMUST00000125702.1	processed_transcript	-
chr11_63892462_63893808	chr11	63892462	63893808	ENSMUSG00000042148.8	Cox10	ENSMUST00000049091.8	protein_coding	-
chr11_64248346_64250164	chr11	64248346	64250164	ENSMUSG00000047759.6	Hs3st3a1	ENSMUST00000058652.5	protein_coding	+
chr11_64248346_64250164	chr11	64248346	64250164	ENSMUSG00000053481.1	F930015N05Rik	ENSMUST00000065935.1	pseudogene	-
chr11_64656069_64657231	chr11	64656069	64657231	ENSMUSG00000086490.1	Gm12292	ENSMUST00000122911.1	lincRNA	-
chr11_64791856_64793229	chr11	64791856	64793229	ENSMUSG00000020549.8	Elac2	ENSMUST00000071891.5	protein_coding	+
chr11_64791856_64793229	chr11	64791856	64793229	ENSMUSG00000020549.8	Elac2	ENSMUST00000108697.1	protein_coding	+
chr11_64791856_64793229	chr11	64791856	64793229	ENSMUSG00000020549.8	Elac2	ENSMUST00000142574.1	processed_transcript	+
chr11_64791856_64793229	chr11	64791856	64793229	ENSMUSG00000020549.8	Elac2	ENSMUST00000101049.2	protein_coding	+
chr11_64791856_64793229	chr11	64791856	64793229	ENSMUSG00000020549.8	Elac2	ENSMUST00000140369.1	processed_transcript	+
chr11_64973358_64973565	chr11	64973358	64973565	ENSMUSG00000020548.4	1700086D15Rik	ENSMUST00000108696.1	protein_coding	-
chr11_64973358_64973565	chr11	64973358	64973565	ENSMUSG00000020548.4	1700086D15Rik	ENSMUST00000020855.3	protein_coding	-
chr11_64974547_64976789	chr11	64974547	64976789	ENSMUSG00000033389.9	Arhgap44	ENSMUST00000093001.4	protein_coding	-
chr11_64974547_64976789	chr11	64974547	64976789	ENSMUSG00000033389.9	Arhgap44	ENSMUST00000093002.5	protein_coding	-
chr11_64974547_64976789	chr11	64974547	64976789	ENSMUSG00000033389.9	Arhgap44	ENSMUST00000166845.1	protein_coding	-
chr11_64974547_64976789	chr11	64974547	64976789	ENSMUSG00000033389.9	Arhgap44	ENSMUST00000093003.4	protein_coding	-
chr11_64974547_64976789	chr11	64974547	64976789	ENSMUSG00000033389.9	Arhgap44	ENSMUST00000047463.8	protein_coding	-
chr11_64983675_64984234	chr11	64983675	64984234	ENSMUSG00000082857.1	Gm12293	ENSMUST00000121898.1	transcribed_processed_pseudogene	-
chr11_65018235_65019249	chr11	65018235	65019249	ENSMUSG00000020542.11	Myocd	ENSMUST00000144399.1	protein_coding	-
chr11_65083030_65084192	chr11	65083030	65084192	ENSMUSG00000020542.11	Myocd	ENSMUST00000150823.1	processed_transcript	-
chr11_65083030_65084192	chr11	65083030	65084192	ENSMUSG00000020542.11	Myocd	ENSMUST00000092999.4	protein_coding	-
chr11_65083030_65084192	chr11	65083030	65084192	ENSMUSG00000020542.11	Myocd	ENSMUST00000108695.2	protein_coding	-
chr11_65083030_65084192	chr11	65083030	65084192	ENSMUSG00000020542.11	Myocd	ENSMUST00000102635.3	protein_coding	-
chr11_65179123_65180641	chr11	65179123	65180641	ENSMUSG00000085162.1	Gm12295	ENSMUST00000130362.1	lincRNA	-
chr11_65548087_65548868	chr11	65548087	65548868	ENSMUSG00000076460.1	Mir744	ENSMUST00000103261.1	miRNA	-
chr11_65558942_65560109	chr11	65558942	65560109	ENSMUSG00000033352.5	Map2k4	ENSMUST00000138093.1	processed_transcript	-
chr11_65600665_65602397	chr11	65600665	65602397	ENSMUSG00000033352.5	Map2k4	ENSMUST00000130009.1	nonsense_mediated_decay	-
chr11_65600665_65602397	chr11	65600665	65602397	ENSMUSG00000033352.5	Map2k4	ENSMUST00000152096.1	protein_coding	-
chr11_65600665_65602397	chr11	65600665	65602397	ENSMUSG00000033352.5	Map2k4	ENSMUST00000140301.1	nonsense_mediated_decay	-
chr11_65600665_65602397	chr11	65600665	65602397	ENSMUSG00000033352.5	Map2k4	ENSMUST00000046963.3	protein_coding	-
chr11_65619744_65621369	chr11	65619744	65621369	ENSMUSG00000018347.9	Zkscan6	ENSMUST00000071465.2	protein_coding	+
chr11_65619744_65621369	chr11	65619744	65621369	ENSMUSG00000018347.9	Zkscan6	ENSMUST00000018491.7	protein_coding	+
chr11_65619744_65621369	chr11	65619744	65621369	ENSMUSG00000018347.9	Zkscan6	ENSMUST00000170408.1	protein_coding	+
chr11_65818432_65818691	chr11	65818432	65818691	ENSMUSG00000056752.9	Dnahc9	ENSMUST00000152386.1	protein_coding	-
chr11_65981046_65982461	chr11	65981046	65982461	ENSMUSG00000084967.1	Gm12296	ENSMUST00000144922.1	processed_transcript	+
chr11_65981046_65982461	chr11	65981046	65982461	ENSMUSG00000056752.9	Dnahc9	ENSMUST00000142836.1	retained_intron	-
chr11_65981046_65982461	chr11	65981046	65982461	ENSMUSG00000056752.9	Dnahc9	ENSMUST00000108691.1	protein_coding	-
chr11_65981046_65982461	chr11	65981046	65982461	ENSMUSG00000056752.9	Dnahc9	ENSMUST00000080665.3	protein_coding	-
chr11_66339040_66339784	chr11	66339040	66339784	ENSMUSG00000053930.7	Shisa6	ENSMUST00000066679.6	protein_coding	-
chr11_66339040_66339784	chr11	66339040	66339784	ENSMUSG00000053930.7	Shisa6	ENSMUST00000123454.1	protein_coding	-
chr11_66725445_66727065	chr11	66725445	66727065	ENSMUSG00000048070.4	Pirt	ENSMUST00000123434.2	protein_coding	+
chr11_66769769_66770275	chr11	66769769	66770275	ENSMUSG00000085683.1	9130409J20Rik	ENSMUST00000150220.1	lincRNA	+
chr11_66771171_66771542	chr11	66771171	66771542	ENSMUSG00000085683.1	9130409J20Rik	ENSMUST00000127166.1	lincRNA	+
chr11_66815428_66815737	chr11	66815428	66815737	ENSMUSG00000085926.1	Gm12299	ENSMUST00000138819.1	processed_transcript	+
chr11_66838074_66839363	chr11	66838074	66839363	ENSMUSG00000050270.6	Tmem220	ENSMUST00000079077.5	protein_coding	+
chr11_66838074_66839363	chr11	66838074	66839363	ENSMUSG00000050270.6	Tmem220	ENSMUST00000061786.5	protein_coding	+
chr11_66853819_66854374	chr11	66853819	66854374	ENSMUSG00000020910.10	2310004I24Rik	ENSMUST00000136013.1	processed_transcript	-
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000069844.6	Sco1	ENSMUST00000108690.3	protein_coding	+
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000069844.6	Sco1	ENSMUST00000092996.4	protein_coding	+
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000020910.10	2310004I24Rik	ENSMUST00000146648.1	processed_transcript	-
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000020910.10	2310004I24Rik	ENSMUST00000148379.1	processed_transcript	-
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000020910.10	2310004I24Rik	ENSMUST00000127407.1	processed_transcript	-
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000020910.10	2310004I24Rik	ENSMUST00000116363.1	protein_coding	-
chr11_66865157_66866634	chr11	66865157	66866634	ENSMUSG00000020910.10	2310004I24Rik	ENSMUST00000146338.1	nonsense_mediated_decay	-
chr11_67033175_67033576	chr11	67033175	67033576	ENSMUSG00000056328.7	Myh1	ENSMUST00000169284.1	protein_coding	+
chr11_67042120_67044156	chr11	67042120	67044156	ENSMUSG00000085348.1	Gm12300	ENSMUST00000137662.1	antisense	-
chr11_67050943_67051340	chr11	67050943	67051340	ENSMUSG00000057003.5	Myh4	ENSMUST00000167177.1	protein_coding	+
chr11_67050943_67051340	chr11	67050943	67051340	ENSMUSG00000057003.5	Myh4	ENSMUST00000018632.4	protein_coding	+
chr11_67050943_67051340	chr11	67050943	67051340	ENSMUSG00000085348.1	Gm12300	ENSMUST00000149070.1	antisense	-
chr11_67050943_67051340	chr11	67050943	67051340	ENSMUSG00000085348.1	Gm12300	ENSMUST00000145021.1	antisense	-
chr11_67268174_67268924	chr11	67268174	67268924	ENSMUSG00000033066.9	Gas7	ENSMUST00000108681.1	protein_coding	+
chr11_67269085_67270018	chr11	67269085	67270018	ENSMUSG00000033066.9	Gas7	ENSMUST00000108681.1	protein_coding	+
chr11_67269085_67270018	chr11	67269085	67270018	ENSMUSG00000033066.9	Gas7	ENSMUST00000136796.1	processed_transcript	+
chr11_67360103_67360496	chr11	67360103	67360496	ENSMUSG00000033066.9	Gas7	ENSMUST00000041611.5	protein_coding	+
chr11_67399504_67400500	chr11	67399504	67400500	ENSMUSG00000033066.9	Gas7	ENSMUST00000145496.1	processed_transcript	+
chr11_67399504_67400500	chr11	67399504	67400500	ENSMUSG00000033066.9	Gas7	ENSMUST00000108682.2	protein_coding	+
chr11_67399504_67400500	chr11	67399504	67400500	ENSMUSG00000033066.9	Gas7	ENSMUST00000108680.1	protein_coding	+
chr11_67409314_67410640	chr11	67409314	67410640	ENSMUSG00000033066.9	Gas7	ENSMUST00000151784.1	processed_transcript	+
chr11_67409314_67410640	chr11	67409314	67410640	ENSMUSG00000033066.9	Gas7	ENSMUST00000147276.1	processed_transcript	+
chr11_67465740_67466839	chr11	67465740	67466839	ENSMUSG00000033066.9	Gas7	ENSMUST00000140863.1	processed_transcript	+
chr11_67508779_67509151	chr11	67508779	67509151	ENSMUSG00000020907.1	Rcvrn	ENSMUST00000021290.1	protein_coding	+
chr11_67569578_67571829	chr11	67569578	67571829	ENSMUSG00000049928.9	Glp2r	ENSMUST00000021289.3	protein_coding	-
chr11_67593819_67594402	chr11	67593819	67594402	ENSMUSG00000070402.5	Gm12302	ENSMUST00000155317.1	lincRNA	+
chr11_67611300_67612411	chr11	67611300	67612411	ENSMUSG00000033044.6	Dhrs7c	ENSMUST00000123862.1	processed_transcript	+
chr11_67611300_67612411	chr11	67611300	67612411	ENSMUSG00000033044.6	Dhrs7c	ENSMUST00000149722.1	processed_transcript	+
chr11_67611300_67612411	chr11	67611300	67612411	ENSMUSG00000033044.6	Dhrs7c	ENSMUST00000168612.1	protein_coding	+
chr11_67611300_67612411	chr11	67611300	67612411	ENSMUSG00000033044.6	Dhrs7c	ENSMUST00000135830.1	processed_transcript	+
chr11_67611300_67612411	chr11	67611300	67612411	ENSMUSG00000033044.6	Dhrs7c	ENSMUST00000142686.1	processed_transcript	+
chr11_67611300_67612411	chr11	67611300	67612411	ENSMUSG00000033044.6	Dhrs7c	ENSMUST00000040574.4	protein_coding	+
chr11_67734664_67736661	chr11	67734664	67736661	ENSMUSG00000055134.5	9130017K11Rik	ENSMUST00000135670.1	processed_transcript	+
chr11_67734664_67736661	chr11	67734664	67736661	ENSMUSG00000055134.5	9130017K11Rik	ENSMUST00000068548.4	processed_transcript	+
chr11_67734664_67736661	chr11	67734664	67736661	ENSMUSG00000020905.5	Usp43	ENSMUST00000152120.1	processed_transcript	-
chr11_67734664_67736661	chr11	67734664	67736661	ENSMUSG00000020905.5	Usp43	ENSMUST00000021288.3	protein_coding	-
chr11_67734664_67736661	chr11	67734664	67736661	ENSMUSG00000020905.5	Usp43	ENSMUST00000108677.1	protein_coding	-
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020903.7	Stx8	ENSMUST00000021285.7	protein_coding	+
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020903.7	Stx8	ENSMUST00000021286.4	protein_coding	+
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020903.7	Stx8	ENSMUST00000108675.1	protein_coding	+
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020903.7	Stx8	ENSMUST00000129992.1	processed_transcript	+
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020903.7	Stx8	ENSMUST00000148642.1	processed_transcript	+
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020903.7	Stx8	ENSMUST00000142649.1	processed_transcript	+
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020904.5	Wdr16	ENSMUST00000126766.1	protein_coding	-
chr11_67778726_67780463	chr11	67778726	67780463	ENSMUSG00000020904.5	Wdr16	ENSMUST00000021287.5	protein_coding	-
chr11_68009176_68010470	chr11	68009176	68010470	ENSMUSG00000087242.1	C78197	ENSMUST00000152781.1	antisense	-
chr11_68023129_68023346	chr11	68023129	68023346	ENSMUSG00000092434.1	RP23-25D18.6	ENSMUST00000173257.1	processed_transcript	-
chr11_68083579_68085035	chr11	68083579	68085035	ENSMUSG00000084993.1	Gm12305	ENSMUST00000151817.1	sense_intronic	-
chr11_68198460_68201080	chr11	68198460	68201080	ENSMUSG00000020902.6	Ntn1	ENSMUST00000135141.1	protein_coding	-
chr11_68198460_68201080	chr11	68198460	68201080	ENSMUSG00000020902.6	Ntn1	ENSMUST00000021284.3	protein_coding	-
chr11_68212714_68214623	chr11	68212714	68214623	ENSMUSG00000020902.6	Ntn1	ENSMUST00000108674.2	protein_coding	-
chr11_68244072_68246561	chr11	68244072	68246561	ENSMUSG00000020901.7	Pik3r5	ENSMUST00000021283.7	protein_coding	+
chr11_68244072_68246561	chr11	68244072	68246561	ENSMUSG00000020901.7	Pik3r5	ENSMUST00000154220.1	processed_transcript	+
chr11_68244072_68246561	chr11	68244072	68246561	ENSMUSG00000020901.7	Pik3r5	ENSMUST00000141716.1	processed_transcript	+
chr11_68288918_68289235	chr11	68288918	68289235	ENSMUSG00000020901.7	Pik3r5	ENSMUST00000155887.1	processed_transcript	+
chr11_68315932_68316947	chr11	68315932	68316947	ENSMUSG00000046207.8	Pik3r6	ENSMUST00000102613.1	protein_coding	+
chr11_68315932_68316947	chr11	68315932	68316947	ENSMUSG00000046207.8	Pik3r6	ENSMUST00000060441.6	protein_coding	+
chr11_68315932_68316947	chr11	68315932	68316947	ENSMUSG00000046207.8	Pik3r6	ENSMUST00000153671.1	processed_transcript	+
chr11_68369366_68370464	chr11	68369366	68370464	ENSMUSG00000048329.6	Mfsd6l	ENSMUST00000053211.6	protein_coding	+
chr11_68400347_68400629	chr11	68400347	68400629	ENSMUSG00000045915.9	Ccdc42	ENSMUST00000154294.1	protein_coding	+
chr11_68400347_68400629	chr11	68400347	68400629	ENSMUSG00000045915.9	Ccdc42	ENSMUST00000063006.5	protein_coding	+
chr11_68400347_68400629	chr11	68400347	68400629	ENSMUSG00000085937.1	4930535C22Rik	ENSMUST00000148019.1	antisense	-
chr11_68407686_68408003	chr11	68407686	68408003	ENSMUSG00000045915.9	Ccdc42	ENSMUST00000102612.1	protein_coding	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000141558.1	processed_transcript	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000102611.3	protein_coding	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000143032.1	processed_transcript	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000108673.1	protein_coding	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000018887.8	protein_coding	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000155765.1	retained_intron	+
chr11_68504602_68506978	chr11	68504602	68506978	ENSMUSG00000020900.9	Myh10	ENSMUST00000092984.5	protein_coding	+
chr11_68627964_68628389	chr11	68627964	68628389	ENSMUSG00000020900.9	Myh10	ENSMUST00000139059.1	processed_transcript	+
chr11_68653086_68653913	chr11	68653086	68653913	ENSMUSG00000018736.8	Ndel1	ENSMUST00000143899.1	processed_transcript	-
chr11_68665160_68668087	chr11	68665160	68668087	ENSMUSG00000018736.8	Ndel1	ENSMUST00000108672.1	protein_coding	-
chr11_68665160_68668087	chr11	68665160	68668087	ENSMUSG00000018736.8	Ndel1	ENSMUST00000018880.7	protein_coding	-
chr11_68673205_68673974	chr11	68673205	68673974	ENSMUSG00000018736.8	Ndel1	ENSMUST00000144300.1	processed_transcript	-
chr11_68678102_68679429	chr11	68678102	68679429	ENSMUSG00000018736.8	Ndel1	ENSMUST00000127469.1	processed_transcript	-
chr11_68685185_68685938	chr11	68685185	68685938	ENSMUSG00000018736.8	Ndel1	ENSMUST00000101017.2	protein_coding	-
chr11_68714575_68715735	chr11	68714575	68715735	ENSMUSG00000060938.8	Rpl26	ENSMUST00000073471.6	protein_coding	+
chr11_68714575_68715735	chr11	68714575	68715735	ENSMUSG00000060938.8	Rpl26	ENSMUST00000101014.2	protein_coding	+
chr11_68714575_68715735	chr11	68714575	68715735	ENSMUSG00000060938.8	Rpl26	ENSMUST00000128952.1	protein_coding	+
chr11_68714575_68715735	chr11	68714575	68715735	ENSMUSG00000060938.8	Rpl26	ENSMUST00000167436.1	protein_coding	+
chr11_68740127_68740700	chr11	68740127	68740700	ENSMUSG00000032921.7	Odf4	ENSMUST00000125134.1	nonsense_mediated_decay	-
chr11_68740127_68740700	chr11	68740127	68740700	ENSMUSG00000032921.7	Odf4	ENSMUST00000156828.1	nonsense_mediated_decay	-
chr11_68740127_68740700	chr11	68740127	68740700	ENSMUSG00000032921.7	Odf4	ENSMUST00000130271.1	nonsense_mediated_decay	-
chr11_68740127_68740700	chr11	68740127	68740700	ENSMUSG00000032921.7	Odf4	ENSMUST00000038932.7	protein_coding	-
chr11_68760041_68761567	chr11	68760041	68761567	ENSMUSG00000052921.6	Arhgef15	ENSMUST00000141747.1	processed_transcript	-
chr11_68760041_68761567	chr11	68760041	68761567	ENSMUSG00000052921.6	Arhgef15	ENSMUST00000151520.1	processed_transcript	-
chr11_68760041_68761567	chr11	68760041	68761567	ENSMUSG00000052921.6	Arhgef15	ENSMUST00000131686.1	processed_transcript	-
chr11_68770236_68770576	chr11	68770236	68770576	ENSMUSG00000052921.6	Arhgef15	ENSMUST00000065040.5	protein_coding	-
chr11_68780618_68781996	chr11	68780618	68781996	ENSMUSG00000018740.8	Slc25a35	ENSMUST00000102606.3	protein_coding	+
chr11_68780618_68781996	chr11	68780618	68781996	ENSMUSG00000018740.8	Slc25a35	ENSMUST00000136520.1	processed_transcript	+
chr11_68780618_68781996	chr11	68780618	68781996	ENSMUSG00000018740.8	Slc25a35	ENSMUST00000018884.5	protein_coding	+
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000133099.1	processed_transcript	-
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000156178.1	processed_transcript	-
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000144271.1	processed_transcript	-
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000143444.1	processed_transcript	-
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000138362.1	processed_transcript	-
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000132093.1	processed_transcript	-
chr11_68786558_68787807	chr11	68786558	68787807	ENSMUSG00000032892.7	Rangrf	ENSMUST00000038644.4	protein_coding	-
chr11_68821465_68822427	chr11	68821465	68822427	ENSMUSG00000020899.8	Pfas	ENSMUST00000172987.1	retained_intron	-
chr11_68821465_68822427	chr11	68821465	68822427	ENSMUSG00000020899.8	Pfas	ENSMUST00000021282.5	protein_coding	-
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000021278.7	protein_coding	+
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000108667.2	protein_coding	+
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000135611.1	retained_intron	+
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000161455.1	protein_coding	+
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000152979.1	nonsense_mediated_decay	+
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000116359.2	protein_coding	+
chr11_68829045_68830277	chr11	68829045	68830277	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000146621.2	processed_transcript	+
chr11_68842293_68842680	chr11	68842293	68842680	ENSMUSG00000020898.11	1500010J02Rik	ENSMUST00000123871.1	processed_transcript	+
chr11_68858921_68859782	chr11	68858921	68859782	ENSMUSG00000020897.6	Aurkb	ENSMUST00000108666.1	protein_coding	+
chr11_68858921_68859782	chr11	68858921	68859782	ENSMUSG00000020897.6	Aurkb	ENSMUST00000021277.5	protein_coding	+
chr11_68858921_68859782	chr11	68858921	68859782	ENSMUSG00000020897.6	Aurkb	ENSMUST00000139457.1	processed_transcript	+
chr11_68858921_68859782	chr11	68858921	68859782	ENSMUSG00000020897.6	Aurkb	ENSMUST00000126576.1	retained_intron	+
chr11_68872603_68873443	chr11	68872603	68873443	ENSMUSG00000045176.2	2310047M10Rik	ENSMUST00000051888.2	protein_coding	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000075980.5	protein_coding	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000094081.4	protein_coding	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000123821.1	processed_transcript	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000152142.1	processed_transcript	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000123038.1	processed_transcript	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000128323.1	processed_transcript	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000146646.1	processed_transcript	+
chr11_68883748_68885036	chr11	68883748	68885036	ENSMUSG00000020895.8	Tmem107	ENSMUST00000125215.1	processed_transcript	+
chr11_68886272_68887674	chr11	68886272	68887674	ENSMUSG00000064899.1	Snord118	ENSMUST00000082965.1	snoRNA	+
chr11_68901506_68903154	chr11	68901506	68903154	ENSMUSG00000020894.10	Vamp2	ENSMUST00000021273.6	protein_coding	+
chr11_68901506_68903154	chr11	68901506	68903154	ENSMUSG00000020894.10	Vamp2	ENSMUST00000117780.1	protein_coding	+
chr11_68901506_68903154	chr11	68901506	68903154	ENSMUSG00000020894.10	Vamp2	ENSMUST00000149780.1	retained_intron	+
chr11_68901506_68903154	chr11	68901506	68903154	ENSMUSG00000020894.10	Vamp2	ENSMUST00000149559.1	processed_transcript	+
chr11_68901506_68903154	chr11	68901506	68903154	ENSMUSG00000020894.10	Vamp2	ENSMUST00000146847.1	retained_intron	+
chr11_68908096_68909498	chr11	68908096	68909498	ENSMUSG00000020893.11	Per1	ENSMUST00000101004.2	protein_coding	+
chr11_68912005_68913062	chr11	68912005	68913062	ENSMUSG00000020893.11	Per1	ENSMUST00000021271.7	protein_coding	+
chr11_68913312_68913794	chr11	68913312	68913794	ENSMUSG00000020893.11	Per1	ENSMUST00000132462.1	protein_coding	+
chr11_68913312_68913794	chr11	68913312	68913794	ENSMUSG00000020893.11	Per1	ENSMUST00000166748.1	protein_coding	+
chr11_68935763_68936521	chr11	68935763	68936521	ENSMUSG00000090920.1	9130213A22Rik	ENSMUST00000165652.1	lincRNA	-
chr11_68938543_68939655	chr11	68938543	68939655	ENSMUSG00000020892.3	Aloxe3	ENSMUST00000021268.2	protein_coding	+
chr11_68938543_68939655	chr11	68938543	68939655	ENSMUSG00000020892.3	Aloxe3	ENSMUST00000155324.2	retained_intron	+
chr11_68947078_68948526	chr11	68947078	68948526	ENSMUSG00000020892.3	Aloxe3	ENSMUST00000156874.1	retained_intron	+
chr11_68970258_68970707	chr11	68970258	68970707	ENSMUSG00000032807.5	Alox12b	ENSMUST00000036424.2	protein_coding	+
chr11_69010195_69011326	chr11	69010195	69011326	ENSMUSG00000020891.5	Alox8	ENSMUST00000156157.1	retained_intron	-
chr11_69010195_69011326	chr11	69010195	69011326	ENSMUSG00000020891.5	Alox8	ENSMUST00000144787.1	retained_intron	-
chr11_69010195_69011326	chr11	69010195	69011326	ENSMUSG00000020891.5	Alox8	ENSMUST00000094078.3	protein_coding	-
chr11_69010195_69011326	chr11	69010195	69011326	ENSMUSG00000020891.5	Alox8	ENSMUST00000021262.3	protein_coding	-
chr11_69118586_69119482	chr11	69118586	69119482	ENSMUSG00000032782.11	Cntrob	ENSMUST00000156175.1	processed_transcript	-
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000049299.8	Trappc1	ENSMUST00000102602.1	protein_coding	+
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000049299.8	Trappc1	ENSMUST00000102601.3	protein_coding	+
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000049299.8	Trappc1	ENSMUST00000060956.6	protein_coding	+
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000049299.8	Trappc1	ENSMUST00000108662.1	protein_coding	+
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000049299.8	Trappc1	ENSMUST00000140555.1	processed_transcript	+
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000032782.11	Cntrob	ENSMUST00000108663.2	protein_coding	-
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000032782.11	Cntrob	ENSMUST00000123176.1	nonsense_mediated_decay	-
chr11_69136601_69138168	chr11	69136601	69138168	ENSMUSG00000032782.11	Cntrob	ENSMUST00000092973.5	protein_coding	-
chr11_69139215_69140188	chr11	69139215	69140188	ENSMUSG00000018470.2	Kcnab3	ENSMUST00000018614.2	protein_coding	+
chr11_69145092_69146294	chr11	69145092	69146294	ENSMUSG00000086900.1	Gm16040	ENSMUST00000136196.1	antisense	-
chr11_69153355_69155009	chr11	69153355	69155009	ENSMUSG00000043419.10	A030009H04Rik	ENSMUST00000129321.1	processed_transcript	+
chr11_69153355_69155009	chr11	69153355	69155009	ENSMUSG00000043419.10	A030009H04Rik	ENSMUST00000151617.1	processed_transcript	+
chr11_69177835_69178239	chr11	69177835	69178239	ENSMUSG00000018474.10	Chd3	ENSMUST00000128981.1	protein_coding	-
chr11_69178291_69179318	chr11	69178291	69179318	ENSMUSG00000018474.10	Chd3	ENSMUST00000128981.1	protein_coding	-
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000059278.3	Lsmd1	ENSMUST00000142126.1	processed_transcript	+
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000059278.3	Lsmd1	ENSMUST00000144531.1	protein_coding	+
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000059278.3	Lsmd1	ENSMUST00000082283.3	processed_transcript	+
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000059278.3	Lsmd1	ENSMUST00000124932.1	processed_transcript	+
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000044795.6	Cyb5d1	ENSMUST00000051620.4	protein_coding	-
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000044795.6	Cyb5d1	ENSMUST00000108660.1	protein_coding	-
chr11_69208229_69210153	chr11	69208229	69210153	ENSMUSG00000044795.6	Cyb5d1	ENSMUST00000134903.1	processed_transcript	-
chr11_69214560_69215627	chr11	69214560	69215627	ENSMUSG00000085178.1	1700064E03Rik	ENSMUST00000129924.1	antisense	+
chr11_69279269_69279469	chr11	69279269	69279469	ENSMUSG00000005237.7	Dnahc2	ENSMUST00000151811.1	processed_transcript	-
chr11_69330274_69330760	chr11	69330274	69330760	ENSMUSG00000005237.7	Dnahc2	ENSMUST00000154985.1	processed_transcript	-
chr11_69372267_69375618	chr11	69372267	69375618	ENSMUSG00000003934.5	Efnb3	ENSMUST00000004036.5	protein_coding	-
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000059552.6	Trp53	ENSMUST00000005371.5	protein_coding	+
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000059552.6	Trp53	ENSMUST00000108658.3	protein_coding	+
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000059552.6	Trp53	ENSMUST00000171247.1	protein_coding	+
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000059552.6	Trp53	ENSMUST00000147512.1	processed_transcript	+
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000059552.6	Trp53	ENSMUST00000108657.3	protein_coding	+
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000041346.5	Wrap53	ENSMUST00000132548.1	protein_coding	-
chr11_69392397_69395219	chr11	69392397	69395219	ENSMUSG00000041346.5	Wrap53	ENSMUST00000048139.5	protein_coding	-
chr11_69417123_69417451	chr11	69417123	69417451	ENSMUSG00000041329.7	Atp1b2	ENSMUST00000144425.1	processed_transcript	-
chr11_69418350_69420117	chr11	69418350	69420117	ENSMUSG00000041329.7	Atp1b2	ENSMUST00000130394.1	processed_transcript	-
chr11_69418350_69420117	chr11	69418350	69420117	ENSMUSG00000041329.7	Atp1b2	ENSMUST00000047889.6	protein_coding	-
chr11_69434990_69436864	chr11	69434990	69436864	ENSMUSG00000069835.4	Sat2	ENSMUST00000108656.2	protein_coding	+
chr11_69434990_69436864	chr11	69434990	69436864	ENSMUSG00000069835.4	Sat2	ENSMUST00000151255.1	retained_intron	+
chr11_69434990_69436864	chr11	69434990	69436864	ENSMUSG00000069835.4	Sat2	ENSMUST00000092969.1	protein_coding	+
chr11_69445657_69447093	chr11	69445657	69447093	ENSMUSG00000018765.5	Fxr2	ENSMUST00000018909.3	protein_coding	+
chr11_69468546_69469552	chr11	69468546	69469552	ENSMUSG00000041287.5	Sox15	ENSMUST00000047373.5	protein_coding	+
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000088752.1	Mir1934	ENSMUST00000158127.1	miRNA	+
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000139155.1	retained_intron	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000137288.1	retained_intron	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000125389.1	nonsense_mediated_decay	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000155200.1	protein_coding	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000148242.1	nonsense_mediated_decay	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000129224.1	protein_coding	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000094073.3	protein_coding	-
chr11_69475513_69476853	chr11	69475513	69476853	ENSMUSG00000018761.7	Mpdu1	ENSMUST00000018905.5	protein_coding	-
chr11_69479492_69480008	chr11	69479492	69480008	ENSMUSG00000018774.7	Cd68	ENSMUST00000108654.2	protein_coding	-
chr11_69479492_69480008	chr11	69479492	69480008	ENSMUSG00000018774.7	Cd68	ENSMUST00000154124.1	processed_transcript	-
chr11_69479492_69480008	chr11	69479492	69480008	ENSMUSG00000018774.7	Cd68	ENSMUST00000018918.5	protein_coding	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000140310.1	processed_transcript	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000129295.1	retained_intron	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000145289.1	retained_intron	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000127677.1	processed_transcript	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000142214.1	processed_transcript	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000139299.1	processed_transcript	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000163666.1	protein_coding	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000123995.1	retained_intron	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000128519.1	retained_intron	-
chr11_69484355_69486461	chr11	69484355	69486461	ENSMUSG00000059796.9	Eif4a1	ENSMUST00000102589.4	protein_coding	-
chr11_69495002_69496786	chr11	69495002	69496786	ENSMUSG00000085890.1	2010012P19Rik	ENSMUST00000144033.1	antisense	+
chr11_69495002_69496786	chr11	69495002	69496786	ENSMUSG00000005204.5	Senp3	ENSMUST00000066760.1	protein_coding	-
chr11_69495002_69496786	chr11	69495002	69496786	ENSMUSG00000005204.5	Senp3	ENSMUST00000005336.2	protein_coding	-
chr11_69495002_69496786	chr11	69495002	69496786	ENSMUSG00000005204.5	Senp3	ENSMUST00000094071.2	protein_coding	-
chr11_69497787_69498048	chr11	69497787	69498048	ENSMUSG00000085890.1	2010012P19Rik	ENSMUST00000140371.1	antisense	+
chr11_69497787_69498048	chr11	69497787	69498048	ENSMUSG00000085890.1	2010012P19Rik	ENSMUST00000145435.1	antisense	+
chr11_69498839_69499721	chr11	69498839	69499721	ENSMUSG00000089669.1	Tnfsf13	ENSMUST00000108648.2	protein_coding	-
chr11_69498839_69499721	chr11	69498839	69499721	ENSMUSG00000089669.1	Tnfsf13	ENSMUST00000018896.7	protein_coding	-
chr11_69508436_69509786	chr11	69508436	69509786	ENSMUSG00000090170.3	Tnfsf12	ENSMUST00000152734.1	protein_coding	-
chr11_69508436_69509786	chr11	69508436	69509786	ENSMUSG00000090170.3	Tnfsf12	ENSMUST00000102587.3	protein_coding	-
chr11_69508436_69509786	chr11	69508436	69509786	ENSMUSG00000018752.12	BC096441	ENSMUST00000108649.1	protein_coding	-
chr11_69508436_69509786	chr11	69508436	69509786	ENSMUSG00000018752.12	BC096441	ENSMUST00000174159.1	protein_coding	-
chr11_69508436_69509786	chr11	69508436	69509786	ENSMUSG00000018752.12	BC096441	ENSMUST00000094070.4	protein_coding	-
chr11_69508436_69509786	chr11	69508436	69509786	ENSMUSG00000018752.12	BC096441	ENSMUST00000108650.2	protein_coding	-
chr11_69571315_69573398	chr11	69571315	69573398	ENSMUSG00000005198.9	Polr2a	ENSMUST00000071213.3	protein_coding	-
chr11_69571315_69573398	chr11	69571315	69573398	ENSMUSG00000005198.9	Polr2a	ENSMUST00000058470.9	protein_coding	-
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000108640.1	protein_coding	+
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000092965.5	protein_coding	+
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000108639.1	protein_coding	+
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000108642.1	protein_coding	+
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000156932.1	protein_coding	+
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000132528.1	protein_coding	+
chr11_69578847_69581615	chr11	69578847	69581615	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000153943.1	protein_coding	+
chr11_69587971_69589040	chr11	69587971	69589040	ENSMUSG00000018750.7	Zbtb4	ENSMUST00000108638.1	protein_coding	+
chr11_69608523_69609545	chr11	69608523	69609545	ENSMUSG00000041189.9	Chrnb1	ENSMUST00000147791.1	processed_transcript	-
chr11_69608523_69609545	chr11	69608523	69609545	ENSMUSG00000041189.9	Chrnb1	ENSMUST00000045971.8	protein_coding	-
chr11_69619002_69619404	chr11	69619002	69619404	ENSMUSG00000089876.3	Tmem102	ENSMUST00000051025.4	protein_coding	-
chr11_69647490_69647924	chr11	69647490	69647924	ENSMUSG00000051790.8	Nlgn2	ENSMUST00000139893.1	protein_coding	-
chr11_69651135_69652699	chr11	69651135	69652699	ENSMUSG00000070394.4	1810027O10Rik	ENSMUST00000133967.1	protein_coding	+
chr11_69651135_69652699	chr11	69651135	69652699	ENSMUSG00000070394.4	1810027O10Rik	ENSMUST00000094065.4	protein_coding	+
chr11_69651135_69652699	chr11	69651135	69652699	ENSMUSG00000070394.4	1810027O10Rik	ENSMUST00000156556.1	processed_transcript	+
chr11_69651135_69652699	chr11	69651135	69652699	ENSMUSG00000070394.4	1810027O10Rik	ENSMUST00000139085.1	processed_transcript	+
chr11_69651135_69652699	chr11	69651135	69652699	ENSMUSG00000070394.4	1810027O10Rik	ENSMUST00000128281.1	processed_transcript	+
chr11_69651135_69652699	chr11	69651135	69652699	ENSMUSG00000051790.8	Nlgn2	ENSMUST00000108634.2	protein_coding	-
chr11_69659088_69660822	chr11	69659088	69660822	ENSMUSG00000019461.6	Plscr3	ENSMUST00000108632.1	protein_coding	+
chr11_69659088_69660822	chr11	69659088	69660822	ENSMUSG00000019461.6	Plscr3	ENSMUST00000152566.1	protein_coding	+
chr11_69659088_69660822	chr11	69659088	69660822	ENSMUSG00000019461.6	Plscr3	ENSMUST00000108633.2	protein_coding	+
chr11_69659088_69660822	chr11	69659088	69660822	ENSMUSG00000019461.6	Plscr3	ENSMUST00000019605.2	protein_coding	+
chr11_69668875_69669457	chr11	69668875	69669457	ENSMUSG00000001583.6	Tnk1	ENSMUST00000156507.1	protein_coding	-
chr11_69671627_69672940	chr11	69671627	69672940	ENSMUSG00000001583.6	Tnk1	ENSMUST00000125571.1	protein_coding	-
chr11_69671627_69672940	chr11	69671627	69672940	ENSMUSG00000001583.6	Tnk1	ENSMUST00000108626.1	protein_coding	-
chr11_69671627_69672940	chr11	69671627	69672940	ENSMUSG00000001583.6	Tnk1	ENSMUST00000001626.3	protein_coding	-
chr11_69671627_69672940	chr11	69671627	69672940	ENSMUSG00000001583.6	Tnk1	ENSMUST00000108631.2	protein_coding	-
chr11_69671627_69672940	chr11	69671627	69672940	ENSMUSG00000001583.6	Tnk1	ENSMUST00000094063.3	protein_coding	-
chr11_69693986_69695259	chr11	69693986	69695259	ENSMUSG00000046731.3	Kctd11	ENSMUST00000050555.3	protein_coding	-
chr11_69707969_69709468	chr11	69707969	69709468	ENSMUSG00000001588.6	Acap1	ENSMUST00000001631.6	protein_coding	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000047284.7	Neurl4	ENSMUST00000108617.2	protein_coding	+
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000047284.7	Neurl4	ENSMUST00000061837.4	protein_coding	+
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000128046.1	processed_transcript	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000129234.1	processed_transcript	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000137122.1	processed_transcript	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000168077.1	protein_coding	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000170595.1	protein_coding	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000018714.6	protein_coding	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000102580.3	protein_coding	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000144431.1	processed_transcript	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000108621.2	protein_coding	-
chr11_69714042_69715911	chr11	69714042	69715911	ENSMUSG00000018570.10	2810408A11Rik	ENSMUST00000100969.2	protein_coding	-
chr11_69721971_69722634	chr11	69721971	69722634	ENSMUSG00000047284.7	Neurl4	ENSMUST00000143861.1	processed_transcript	+
chr11_69724587_69725132	chr11	69724587	69725132	ENSMUSG00000047284.7	Neurl4	ENSMUST00000132183.1	protein_coding	+
chr11_69726255_69728225	chr11	69726255	69728225	ENSMUSG00000023170.8	Gps2	ENSMUST00000072581.2	protein_coding	+
chr11_69726255_69728225	chr11	69726255	69728225	ENSMUSG00000023170.8	Gps2	ENSMUST00000116358.1	protein_coding	+
chr11_69726255_69728225	chr11	69726255	69728225	ENSMUSG00000023170.8	Gps2	ENSMUST00000057884.5	protein_coding	+
chr11_69726255_69728225	chr11	69726255	69728225	ENSMUSG00000023170.8	Gps2	ENSMUST00000124596.1	processed_transcript	+
chr11_69729720_69730034	chr11	69729720	69730034	ENSMUSG00000023170.8	Gps2	ENSMUST00000134581.1	processed_transcript	+
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000152589.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108607.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108608.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108609.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108610.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108612.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108611.1	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000108613.3	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000043419.3	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000070996.4	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000071026.3	protein_coding	-
chr11_69734014_69736026	chr11	69734014	69736026	ENSMUSG00000078812.4	Eif5a	ENSMUST00000164359.1	protein_coding	-
chr11_69748425_69749476	chr11	69748425	69749476	ENSMUSG00000018554.6	Ybx2	ENSMUST00000018698.5	protein_coding	+
chr11_69748425_69749476	chr11	69748425	69749476	ENSMUSG00000018554.6	Ybx2	ENSMUST00000087862.5	protein_coding	+
chr11_69748425_69749476	chr11	69748425	69749476	ENSMUSG00000018554.6	Ybx2	ENSMUST00000149194.1	processed_transcript	+
chr11_69749859_69750249	chr11	69749859	69750249	ENSMUSG00000018554.6	Ybx2	ENSMUST00000108601.2	protein_coding	+
chr11_69760695_69762754	chr11	69760695	69762754	ENSMUSG00000018566.7	Slc2a4	ENSMUST00000135437.1	processed_transcript	-
chr11_69760695_69762754	chr11	69760695	69762754	ENSMUSG00000018566.7	Slc2a4	ENSMUST00000142500.1	processed_transcript	-
chr11_69760695_69762754	chr11	69760695	69762754	ENSMUSG00000018566.7	Slc2a4	ENSMUST00000152487.1	processed_transcript	-
chr11_69760695_69762754	chr11	69760695	69762754	ENSMUSG00000018566.7	Slc2a4	ENSMUST00000018710.6	protein_coding	-
chr11_69764351_69764829	chr11	69764351	69764829	ENSMUSG00000084251.1	Gm12310	ENSMUST00000118013.1	transcribed_processed_pseudogene	+
chr11_69778265_69779259	chr11	69778265	69779259	ENSMUSG00000018569.6	Cldn7	ENSMUST00000108597.1	protein_coding	+
chr11_69778265_69779259	chr11	69778265	69779259	ENSMUSG00000018569.6	Cldn7	ENSMUST00000060651.5	protein_coding	+
chr11_69778265_69779259	chr11	69778265	69779259	ENSMUSG00000018569.6	Cldn7	ENSMUST00000108596.1	protein_coding	+
chr11_69778265_69779259	chr11	69778265	69779259	ENSMUSG00000018569.6	Cldn7	ENSMUST00000018713.6	protein_coding	+
chr11_69779375_69780468	chr11	69779375	69780468	ENSMUSG00000018569.6	Cldn7	ENSMUST00000151515.1	processed_transcript	+
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018559.9	Ctdnep1	ENSMUST00000108593.1	protein_coding	+
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018559.9	Ctdnep1	ENSMUST00000018703.7	protein_coding	+
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000143175.1	retained_intron	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000108595.2	protein_coding	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000143788.1	retained_intron	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000138562.1	retained_intron	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000127437.1	retained_intron	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000123701.1	retained_intron	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000108594.1	protein_coding	-
chr11_69793391_69795298	chr11	69793391	69795298	ENSMUSG00000018565.10	Rai12	ENSMUST00000142788.1	processed_transcript	-
chr11_69796421_69797273	chr11	69796421	69797273	ENSMUSG00000018559.9	Ctdnep1	ENSMUST00000141623.1	processed_transcript	+
chr11_69804238_69805655	chr11	69804238	69805655	ENSMUSG00000018567.8	Gabarap	ENSMUST00000018711.8	protein_coding	+
chr11_69804238_69805655	chr11	69804238	69805655	ENSMUSG00000018567.8	Gabarap	ENSMUST00000108592.1	protein_coding	+
chr11_69804238_69805655	chr11	69804238	69805655	ENSMUSG00000018567.8	Gabarap	ENSMUST00000144443.1	retained_intron	+
chr11_69804238_69805655	chr11	69804238	69805655	ENSMUSG00000018567.8	Gabarap	ENSMUST00000139007.1	processed_transcript	+
chr11_69808809_69809453	chr11	69808809	69809453	ENSMUSG00000018572.4	Phf23	ENSMUST00000018716.3	protein_coding	+
chr11_69808809_69809453	chr11	69808809	69809453	ENSMUSG00000018572.4	Phf23	ENSMUST00000101526.2	protein_coding	+
chr11_69808809_69809453	chr11	69808809	69809453	ENSMUSG00000018572.4	Phf23	ENSMUST00000141231.1	retained_intron	+
chr11_69809733_69810294	chr11	69809733	69810294	ENSMUSG00000018572.4	Phf23	ENSMUST00000133485.1	nonsense_mediated_decay	+
chr11_69809733_69810294	chr11	69809733	69810294	ENSMUSG00000018572.4	Phf23	ENSMUST00000138186.1	protein_coding	+
chr11_69809733_69810294	chr11	69809733	69810294	ENSMUSG00000018572.4	Phf23	ENSMUST00000123817.1	processed_transcript	+
chr11_69809733_69810294	chr11	69809733	69810294	ENSMUSG00000018572.4	Phf23	ENSMUST00000146789.1	processed_transcript	+
chr11_69809733_69810294	chr11	69809733	69810294	ENSMUSG00000018572.4	Phf23	ENSMUST00000153684.1	nonsense_mediated_decay	+
chr11_69810586_69811094	chr11	69810586	69811094	ENSMUSG00000018572.4	Phf23	ENSMUST00000123817.1	processed_transcript	+
chr11_69810586_69811094	chr11	69810586	69811094	ENSMUSG00000018572.4	Phf23	ENSMUST00000146789.1	processed_transcript	+
chr11_69810586_69811094	chr11	69810586	69811094	ENSMUSG00000018572.4	Phf23	ENSMUST00000153684.1	nonsense_mediated_decay	+
chr11_69810586_69811094	chr11	69810586	69811094	ENSMUSG00000018572.4	Phf23	ENSMUST00000135814.1	nonsense_mediated_decay	+
chr11_69813796_69814801	chr11	69813796	69814801	ENSMUSG00000020888.10	Dvl2	ENSMUST00000019362.8	protein_coding	+
chr11_69813796_69814801	chr11	69813796	69814801	ENSMUSG00000020888.10	Dvl2	ENSMUST00000102575.2	nonsense_mediated_decay	+
chr11_69813796_69814801	chr11	69813796	69814801	ENSMUSG00000020888.10	Dvl2	ENSMUST00000130820.1	processed_transcript	+
chr11_69813796_69814801	chr11	69813796	69814801	ENSMUSG00000020888.10	Dvl2	ENSMUST00000135422.1	processed_transcript	+
chr11_69819039_69819588	chr11	69819039	69819588	ENSMUSG00000020888.10	Dvl2	ENSMUST00000149477.1	processed_transcript	+
chr11_69828135_69829250	chr11	69828135	69829250	ENSMUSG00000018574.8	Acadvl	ENSMUST00000145478.1	processed_transcript	-
chr11_69828135_69829250	chr11	69828135	69829250	ENSMUSG00000018574.8	Acadvl	ENSMUST00000137187.1	processed_transcript	-
chr11_69828135_69829250	chr11	69828135	69829250	ENSMUSG00000018574.8	Acadvl	ENSMUST00000156733.1	processed_transcript	-
chr11_69828135_69829250	chr11	69828135	69829250	ENSMUSG00000018574.8	Acadvl	ENSMUST00000018718.7	protein_coding	-
chr11_69828135_69829250	chr11	69828135	69829250	ENSMUSG00000018574.8	Acadvl	ENSMUST00000102574.3	protein_coding	-
chr11_69831565_69831971	chr11	69831565	69831971	ENSMUSG00000020886.9	Dlg4	ENSMUST00000108588.1	protein_coding	+
chr11_69840163_69840539	chr11	69840163	69840539	ENSMUSG00000020886.9	Dlg4	ENSMUST00000135916.1	retained_intron	+
chr11_69842140_69843939	chr11	69842140	69843939	ENSMUSG00000020886.9	Dlg4	ENSMUST00000132597.1	protein_coding	+
chr11_69842140_69843939	chr11	69842140	69843939	ENSMUSG00000020886.9	Dlg4	ENSMUST00000143920.1	processed_transcript	+
chr11_69867151_69868802	chr11	69867151	69868802	ENSMUSG00000020884.8	Asgr1	ENSMUST00000146411.1	protein_coding	+
chr11_69867151_69868802	chr11	69867151	69868802	ENSMUSG00000020884.8	Asgr1	ENSMUST00000108585.2	protein_coding	+
chr11_69867151_69868802	chr11	69867151	69868802	ENSMUSG00000020884.8	Asgr1	ENSMUST00000018699.6	protein_coding	+
chr11_69867151_69868802	chr11	69867151	69868802	ENSMUSG00000020884.8	Asgr1	ENSMUST00000092959.4	protein_coding	+
chr11_69869102_69869836	chr11	69869102	69869836	ENSMUSG00000020884.8	Asgr1	ENSMUST00000123369.1	processed_transcript	+
chr11_69905520_69907372	chr11	69905520	69907372	ENSMUSG00000040963.8	Asgr2	ENSMUST00000102572.1	protein_coding	+
chr11_69905520_69907372	chr11	69905520	69907372	ENSMUSG00000040963.8	Asgr2	ENSMUST00000143772.1	processed_transcript	+
chr11_69905520_69907372	chr11	69905520	69907372	ENSMUSG00000040963.8	Asgr2	ENSMUST00000124721.1	protein_coding	+
chr11_69979813_69980498	chr11	69979813	69980498	ENSMUSG00000000318.9	Clec10a	ENSMUST00000102571.3	protein_coding	+
chr11_69979813_69980498	chr11	69979813	69980498	ENSMUSG00000000318.9	Clec10a	ENSMUST00000000327.6	protein_coding	+
chr11_69981414_69981614	chr11	69981414	69981614	ENSMUSG00000000318.9	Clec10a	ENSMUST00000150966.1	processed_transcript	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000126388.1	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000171032.1	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000144494.2	retained_intron	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000123716.1	nonsense_mediated_decay	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000069008.4	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000094055.3	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000126296.1	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000136328.1	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000153993.2	protein_coding	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000122852.1	processed_transcript	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000131468.1	retained_intron	+
chr11_70025914_70029044	chr11	70025914	70029044	ENSMUSG00000040938.9	Slc16a11	ENSMUST00000149880.1	retained_intron	+
chr11_70033563_70035735	chr11	70033563	70035735	ENSMUSG00000044367.6	Slc16a13	ENSMUST00000141290.1	protein_coding	-
chr11_70033563_70035735	chr11	70033563	70035735	ENSMUSG00000044367.6	Slc16a13	ENSMUST00000159867.1	protein_coding	-
chr11_70033563_70035735	chr11	70033563	70035735	ENSMUSG00000044367.6	Slc16a13	ENSMUST00000060010.2	protein_coding	-
chr11_70042242_70044387	chr11	70042242	70044387	ENSMUSG00000000317.5	Bcl6b	ENSMUST00000140542.1	retained_intron	-
chr11_70042242_70044387	chr11	70042242	70044387	ENSMUSG00000000317.5	Bcl6b	ENSMUST00000153449.1	protein_coding	-
chr11_70042242_70044387	chr11	70042242	70044387	ENSMUSG00000000317.5	Bcl6b	ENSMUST00000000326.5	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000150504.1	processed_transcript	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000138658.1	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000148878.1	processed_transcript	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000100950.2	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000108577.1	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000108576.2	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000081826.6	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000108575.1	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000108579.1	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000021180.6	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000108578.2	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000102569.3	protein_coding	-
chr11_70050752_70052050	chr11	70050752	70052050	ENSMUSG00000020831.10	0610010K14Rik	ENSMUST00000021181.6	protein_coding	-
chr11_70052126_70053896	chr11	70052126	70053896	ENSMUSG00000040904.2	Rnasek	ENSMUST00000125752.1	processed_transcript	-
chr11_70052126_70053896	chr11	70052126	70053896	ENSMUSG00000040904.2	Rnasek	ENSMUST00000141880.1	processed_transcript	-
chr11_70052126_70053896	chr11	70052126	70053896	ENSMUSG00000040904.2	Rnasek	ENSMUST00000040428.2	protein_coding	-
chr11_70067257_70069220	chr11	70067257	70069220	ENSMUSG00000000320.3	Alox12	ENSMUST00000108574.1	protein_coding	-
chr11_70067257_70069220	chr11	70067257	70069220	ENSMUSG00000000320.3	Alox12	ENSMUST00000000329.2	protein_coding	-
chr11_70135150_70136328	chr11	70135150	70136328	ENSMUSG00000018907.4	Alox12e	ENSMUST00000149060.1	retained_intron	-
chr11_70135150_70136328	chr11	70135150	70136328	ENSMUSG00000018907.4	Alox12e	ENSMUST00000139899.1	retained_intron	-
chr11_70135150_70136328	chr11	70135150	70136328	ENSMUSG00000018907.4	Alox12e	ENSMUST00000123752.1	retained_intron	-
chr11_70135150_70136328	chr11	70135150	70136328	ENSMUSG00000018907.4	Alox12e	ENSMUST00000019051.2	protein_coding	-
chr11_70165337_70165774	chr11	70165337	70165774	ENSMUSG00000018924.6	Alox15	ENSMUST00000019068.6	protein_coding	-
chr11_70222824_70224255	chr11	70222824	70224255	ENSMUSG00000018921.5	Pelp1	ENSMUST00000135148.1	protein_coding	-
chr11_70222824_70224255	chr11	70222824	70224255	ENSMUSG00000018921.5	Pelp1	ENSMUST00000019065.3	protein_coding	-
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000124112.1	retained_intron	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000084954.6	protein_coding	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000108568.3	protein_coding	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000079056.2	protein_coding	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000102564.4	protein_coding	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000124943.1	processed_transcript	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000150076.1	processed_transcript	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000128748.1	nonsense_mediated_decay	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000102563.1	protein_coding	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000164318.1	protein_coding	+
chr11_70245450_70247614	chr11	70245450	70247614	ENSMUSG00000060216.8	Arrb2	ENSMUST00000167563.1	protein_coding	+
chr11_70265042_70266143	chr11	70265042	70266143	ENSMUSG00000018923.7	Med11	ENSMUST00000151013.1	protein_coding	+
chr11_70265042_70266143	chr11	70265042	70266143	ENSMUSG00000018923.7	Med11	ENSMUST00000019067.7	protein_coding	+
chr11_70265042_70266143	chr11	70265042	70266143	ENSMUSG00000018923.7	Med11	ENSMUST00000152348.1	retained_intron	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000040829.7	Zmynd15	ENSMUST00000108563.2	protein_coding	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000040829.7	Zmynd15	ENSMUST00000039093.3	protein_coding	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000040829.7	Zmynd15	ENSMUST00000108564.1	protein_coding	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000040829.7	Zmynd15	ENSMUST00000147289.1	processed_transcript	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000040829.7	Zmynd15	ENSMUST00000126105.1	protein_coding	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000040829.7	Zmynd15	ENSMUST00000136029.1	retained_intron	+
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000018920.5	Cxcl16	ENSMUST00000154475.1	retained_intron	-
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000018920.5	Cxcl16	ENSMUST00000126391.1	nonsense_mediated_decay	-
chr11_70272166_70273774	chr11	70272166	70273774	ENSMUSG00000018920.5	Cxcl16	ENSMUST00000019064.2	protein_coding	-
chr11_70318550_70318828	chr11	70318550	70318828	ENSMUSG00000018919.3	Tm4sf5	ENSMUST00000019063.2	protein_coding	+
chr11_70323045_70324119	chr11	70323045	70324119	ENSMUSG00000018919.3	Tm4sf5	ENSMUST00000141924.1	processed_transcript	+
chr11_70332222_70334269	chr11	70332222	70334269	ENSMUSG00000046811.2	Gltpd2	ENSMUST00000057685.2	protein_coding	+
chr11_70338278_70339191	chr11	70338278	70339191	ENSMUSG00000018286.6	Psmb6	ENSMUST00000145503.1	processed_transcript	+
chr11_70338278_70339191	chr11	70338278	70339191	ENSMUSG00000018286.6	Psmb6	ENSMUST00000018430.6	protein_coding	+
chr11_70352791_70354362	chr11	70352791	70354362	ENSMUSG00000020828.6	Pld2	ENSMUST00000157075.1	processed_transcript	+
chr11_70352791_70354362	chr11	70352791	70354362	ENSMUSG00000020828.6	Pld2	ENSMUST00000018429.5	protein_coding	+
chr11_70352791_70354362	chr11	70352791	70354362	ENSMUSG00000020828.6	Pld2	ENSMUST00000108557.3	protein_coding	+
chr11_70352791_70354362	chr11	70352791	70354362	ENSMUSG00000020828.6	Pld2	ENSMUST00000108556.1	protein_coding	+
chr11_70352791_70354362	chr11	70352791	70354362	ENSMUSG00000072768.1	Gm10418	ENSMUST00000100943.1	pseudogene	-
chr11_70375383_70378792	chr11	70375383	70378792	ENSMUSG00000020827.11	Mink1	ENSMUST00000072237.6	protein_coding	+
chr11_70375383_70378792	chr11	70375383	70378792	ENSMUSG00000020827.11	Mink1	ENSMUST00000072873.7	protein_coding	+
chr11_70375383_70378792	chr11	70375383	70378792	ENSMUSG00000020827.11	Mink1	ENSMUST00000171389.1	protein_coding	+
chr11_70375383_70378792	chr11	70375383	70378792	ENSMUSG00000020827.11	Mink1	ENSMUST00000102559.4	protein_coding	+
chr11_70375383_70378792	chr11	70375383	70378792	ENSMUSG00000020827.11	Mink1	ENSMUST00000079244.5	protein_coding	+
chr11_70375383_70378792	chr11	70375383	70378792	ENSMUSG00000020827.11	Mink1	ENSMUST00000102558.4	protein_coding	+
chr11_70412103_70412325	chr11	70412103	70412325	ENSMUSG00000020827.11	Mink1	ENSMUST00000133310.1	processed_transcript	+
chr11_70428239_70429526	chr11	70428239	70429526	ENSMUSG00000087279.3	4930544D05Rik	ENSMUST00000125387.1	antisense	+
chr11_70428239_70429526	chr11	70428239	70429526	ENSMUSG00000087279.3	4930544D05Rik	ENSMUST00000144960.1	antisense	+
chr11_70428239_70429526	chr11	70428239	70429526	ENSMUSG00000014609.9	Chrne	ENSMUST00000154736.1	processed_transcript	-
chr11_70428239_70429526	chr11	70428239	70429526	ENSMUSG00000014609.9	Chrne	ENSMUST00000134836.1	processed_transcript	-
chr11_70428239_70429526	chr11	70428239	70429526	ENSMUSG00000014609.9	Chrne	ENSMUST00000135920.1	processed_transcript	-
chr11_70439011_70439290	chr11	70439011	70439290	ENSMUSG00000085952.1	Gm12315	ENSMUST00000151599.1	antisense	-
chr11_70452235_70452755	chr11	70452235	70452755	ENSMUSG00000050675.6	Gp1ba	ENSMUST00000055184.6	protein_coding	+
chr11_70452235_70452755	chr11	70452235	70452755	ENSMUSG00000050675.6	Gp1ba	ENSMUST00000108551.1	protein_coding	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000141537.1	nonsense_mediated_decay	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000141695.1	nonsense_mediated_decay	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000037534.7	protein_coding	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000152160.1	nonsense_mediated_decay	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000152276.1	retained_intron	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000131071.1	retained_intron	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000141237.1	retained_intron	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000040746.9	Rnf167	ENSMUST00000151034.2	retained_intron	+
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000014606.8	Slc25a11	ENSMUST00000136383.1	protein_coding	-
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000014606.8	Slc25a11	ENSMUST00000157076.1	retained_intron	-
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000014606.8	Slc25a11	ENSMUST00000139638.1	protein_coding	-
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000014606.8	Slc25a11	ENSMUST00000134804.1	retained_intron	-
chr11_70459390_70461682	chr11	70459390	70461682	ENSMUSG00000014606.8	Slc25a11	ENSMUST00000014750.8	protein_coding	-
chr11_70466709_70470409	chr11	70466709	70470409	ENSMUSG00000087523.1	Gm12319	ENSMUST00000131642.1	antisense	-
chr11_70466709_70470409	chr11	70466709	70470409	ENSMUSG00000018293.3	Pfn1	ENSMUST00000108549.1	protein_coding	-
chr11_70466709_70470409	chr11	70466709	70470409	ENSMUSG00000018293.3	Pfn1	ENSMUST00000018437.2	protein_coding	-
chr11_70470492_70470811	chr11	70470492	70470811	ENSMUSG00000060600.8	Eno3	ENSMUST00000157027.1	protein_coding	+
chr11_70470492_70470811	chr11	70470492	70470811	ENSMUSG00000060600.8	Eno3	ENSMUST00000072841.5	protein_coding	+
chr11_70470492_70470811	chr11	70470492	70470811	ENSMUSG00000060600.8	Eno3	ENSMUST00000108548.1	protein_coding	+
chr11_70470492_70470811	chr11	70470492	70470811	ENSMUSG00000060600.8	Eno3	ENSMUST00000126241.1	protein_coding	+
chr11_70471098_70471394	chr11	70471098	70471394	ENSMUSG00000060600.8	Eno3	ENSMUST00000134087.1	protein_coding	+
chr11_70471098_70471394	chr11	70471098	70471394	ENSMUSG00000060600.8	Eno3	ENSMUST00000170716.1	protein_coding	+
chr11_70481854_70483764	chr11	70481854	70483764	ENSMUSG00000018287.6	Spag7	ENSMUST00000129434.1	protein_coding	-
chr11_70481854_70483764	chr11	70481854	70483764	ENSMUSG00000018287.6	Spag7	ENSMUST00000124691.1	retained_intron	-
chr11_70481854_70483764	chr11	70481854	70483764	ENSMUSG00000018287.6	Spag7	ENSMUST00000137691.1	retained_intron	-
chr11_70481854_70483764	chr11	70481854	70483764	ENSMUSG00000018287.6	Spag7	ENSMUST00000018431.6	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000145823.1	nonsense_mediated_decay	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000150224.1	retained_intron	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000054733.6	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000119120.1	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000108545.2	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000120261.1	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000036299.7	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000100933.3	protein_coding	-
chr11_70500056_70502402	chr11	70500056	70502402	ENSMUSG00000040712.9	Camta2	ENSMUST00000108544.1	protein_coding	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000020821.10	Kif1c	ENSMUST00000152618.1	retained_intron	+
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000020821.10	Kif1c	ENSMUST00000102554.1	protein_coding	+
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000020821.10	Kif1c	ENSMUST00000094499.4	protein_coding	+
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000020821.10	Kif1c	ENSMUST00000072187.5	protein_coding	+
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000020821.10	Kif1c	ENSMUST00000137119.2	protein_coding	+
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000152446.1	protein_coding	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000127985.1	processed_transcript	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000108541.1	protein_coding	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000126114.1	protein_coding	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000108543.2	protein_coding	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000108542.1	protein_coding	-
chr11_70513316_70515088	chr11	70513316	70515088	ENSMUSG00000057054.4	Inca1	ENSMUST00000073625.1	protein_coding	-
chr11_70568029_70569687	chr11	70568029	70569687	ENSMUSG00000085502.1	Gm12320	ENSMUST00000127333.1	antisense	-
chr11_70576982_70578647	chr11	70576982	70578647	ENSMUSG00000043602.5	Zfp3	ENSMUST00000060444.5	protein_coding	+
chr11_70625754_70626744	chr11	70625754	70626744	ENSMUSG00000057135.6	A430084P05Rik	ENSMUST00000074572.6	protein_coding	-
chr11_70625754_70626744	chr11	70625754	70626744	ENSMUSG00000057135.6	A430084P05Rik	ENSMUST00000108534.2	protein_coding	-
chr11_70657201_70659601	chr11	70657201	70659601	ENSMUSG00000020817.9	Rabep1	ENSMUST00000108533.2	protein_coding	+
chr11_70657201_70659601	chr11	70657201	70659601	ENSMUSG00000020817.9	Rabep1	ENSMUST00000076270.6	protein_coding	+
chr11_70657201_70659601	chr11	70657201	70659601	ENSMUSG00000020817.9	Rabep1	ENSMUST00000081362.6	protein_coding	+
chr11_70758266_70758568	chr11	70758266	70758568	ENSMUSG00000040667.4	Nup88	ENSMUST00000123917.1	processed_transcript	-
chr11_70758266_70758568	chr11	70758266	70758568	ENSMUSG00000040667.4	Nup88	ENSMUST00000133188.1	processed_transcript	-
chr11_70758266_70758568	chr11	70758266	70758568	ENSMUSG00000040667.4	Nup88	ENSMUST00000141179.1	processed_transcript	-
chr11_70758700_70759448	chr11	70758700	70759448	ENSMUSG00000040667.4	Nup88	ENSMUST00000123917.1	processed_transcript	-
chr11_70758700_70759448	chr11	70758700	70759448	ENSMUSG00000040667.4	Nup88	ENSMUST00000141179.1	processed_transcript	-
chr11_70774006_70775369	chr11	70774006	70775369	ENSMUSG00000040667.4	Nup88	ENSMUST00000145336.1	processed_transcript	-
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000018593.3	protein_coding	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000154430.1	processed_transcript	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000126815.1	processed_transcript	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000136665.1	processed_transcript	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000129531.1	processed_transcript	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000167509.1	protein_coding	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000108529.3	protein_coding	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000169965.1	protein_coding	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000171254.1	protein_coding	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000018449.5	Rpain	ENSMUST00000151608.1	processed_transcript	+
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000040667.4	Nup88	ENSMUST00000138634.1	processed_transcript	-
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000040667.4	Nup88	ENSMUST00000108530.1	protein_coding	-
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000040667.4	Nup88	ENSMUST00000035283.4	protein_coding	-
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000040667.4	Nup88	ENSMUST00000108531.1	protein_coding	-
chr11_70782778_70784745	chr11	70782778	70784745	ENSMUSG00000040667.4	Nup88	ENSMUST00000148168.1	processed_transcript	-
chr11_70786071_70786592	chr11	70786071	70786592	ENSMUSG00000018449.5	Rpain	ENSMUST00000146788.1	processed_transcript	+
chr11_70795558_70796943	chr11	70795558	70796943	ENSMUSG00000018446.7	C1qbp	ENSMUST00000078528.6	protein_coding	-
chr11_70817019_70818834	chr11	70817019	70818834	ENSMUSG00000040620.8	Dhx33	ENSMUST00000142627.1	processed_transcript	-
chr11_70817019_70818834	chr11	70817019	70818834	ENSMUSG00000040620.8	Dhx33	ENSMUST00000124464.1	processed_transcript	-
chr11_70817019_70818834	chr11	70817019	70818834	ENSMUSG00000040620.8	Dhx33	ENSMUST00000108527.1	protein_coding	-
chr11_70817019_70818834	chr11	70817019	70818834	ENSMUSG00000040620.8	Dhx33	ENSMUST00000049048.5	protein_coding	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000133413.1	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000132665.1	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000048807.5	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000164220.1	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000155236.1	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000143762.1	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000040599.6	Mis12	ENSMUST00000136137.1	protein_coding	+
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000131340.1	processed_transcript	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000132198.1	processed_transcript	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000140712.1	processed_transcript	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000018586.5	processed_transcript	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000171041.1	protein_coding	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000143850.1	protein_coding	-
chr11_70831997_70833700	chr11	70831997	70833700	ENSMUSG00000018442.7	Derl2	ENSMUST00000108523.3	protein_coding	-
chr11_70845572_70847561	chr11	70845572	70847561	ENSMUSG00000018451.5	6330403K07Rik	ENSMUST00000156068.1	processed_transcript	-
chr11_70957886_70958855	chr11	70957886	70958855	ENSMUSG00000069830.3	Nlrp1a	ENSMUST00000108519.1	protein_coding	-
chr11_70957886_70958855	chr11	70957886	70958855	ENSMUSG00000069830.3	Nlrp1a	ENSMUST00000168313.1	protein_coding	-
chr11_71043992_71044668	chr11	71043992	71044668	ENSMUSG00000070390.5	Nlrp1b	ENSMUST00000108516.2	protein_coding	-
chr11_71043992_71044668	chr11	71043992	71044668	ENSMUSG00000070390.5	Nlrp1b	ENSMUST00000136493.1	nonsense_mediated_decay	-
chr11_71098662_71099194	chr11	71098662	71099194	ENSMUSG00000092528.1	Nlrp1c-ps	ENSMUST00000174668.1	polymorphic_pseudogene	-
chr11_71098662_71099194	chr11	71098662	71099194	ENSMUSG00000092528.1	Nlrp1c-ps	ENSMUST00000172905.1	protein_coding	-
chr11_71249088_71250861	chr11	71249088	71250861	ENSMUSG00000085230.1	Gm16013	ENSMUST00000152249.1	lincRNA	-
chr11_71471643_71472437	chr11	71471643	71472437	ENSMUSG00000087116.1	Gm12324	ENSMUST00000130837.1	lincRNA	-
chr11_71553492_71554197	chr11	71553492	71554197	ENSMUSG00000085251.1	Gm12326	ENSMUST00000152957.1	antisense	-
chr11_71553492_71554197	chr11	71553492	71554197	ENSMUSG00000085251.1	Gm12326	ENSMUST00000132986.1	antisense	-
chr11_71563192_71565691	chr11	71563192	71565691	ENSMUSG00000020811.10	Wscd1	ENSMUST00000150531.1	protein_coding	+
chr11_71563192_71565691	chr11	71563192	71565691	ENSMUSG00000020811.10	Wscd1	ENSMUST00000021168.7	protein_coding	+
chr11_71563192_71565691	chr11	71563192	71565691	ENSMUSG00000020811.10	Wscd1	ENSMUST00000108511.1	protein_coding	+
chr11_71563192_71565691	chr11	71563192	71565691	ENSMUSG00000020811.10	Wscd1	ENSMUST00000108510.1	protein_coding	+
chr11_71563192_71565691	chr11	71563192	71565691	ENSMUSG00000020811.10	Wscd1	ENSMUST00000138339.1	retained_intron	+
chr11_71661164_71661996	chr11	71661164	71661996	ENSMUSG00000077456.1	SNORA17	ENSMUST00000104268.1	snoRNA	-
chr11_71836392_71836617	chr11	71836392	71836617	ENSMUSG00000080577.1	U6atac	ENSMUST00000116927.1	snRNA	+
chr11_71851085_71851446	chr11	71851085	71851446	ENSMUSG00000040554.4	Aipl1	ENSMUST00000059082.3	nonsense_mediated_decay	-
chr11_71851085_71851446	chr11	71851085	71851446	ENSMUSG00000040554.4	Aipl1	ENSMUST00000048207.3	protein_coding	-
chr11_71855264_71856274	chr11	71855264	71856274	ENSMUSG00000020808.3	Fam64a	ENSMUST00000122871.1	protein_coding	+
chr11_71855264_71856274	chr11	71855264	71856274	ENSMUSG00000020808.3	Fam64a	ENSMUST00000021164.3	protein_coding	+
chr11_71855264_71856274	chr11	71855264	71856274	ENSMUSG00000020808.3	Fam64a	ENSMUST00000127369.1	processed_transcript	+
chr11_71855264_71856274	chr11	71855264	71856274	ENSMUSG00000020808.3	Fam64a	ENSMUST00000133880.1	processed_transcript	+
chr11_71855264_71856274	chr11	71855264	71856274	ENSMUSG00000020808.3	Fam64a	ENSMUST00000125655.1	protein_coding	+
chr11_71864228_71865461	chr11	71864228	71865461	ENSMUSG00000040543.9	Pitpnm3	ENSMUST00000134210.1	processed_transcript	-
chr11_71933979_71934317	chr11	71933979	71934317	ENSMUSG00000040543.9	Pitpnm3	ENSMUST00000108507.2	protein_coding	-
chr11_71949098_71950029	chr11	71949098	71950029	ENSMUSG00000040543.9	Pitpnm3	ENSMUST00000142471.1	retained_intron	-
chr11_71949098_71950029	chr11	71949098	71950029	ENSMUSG00000040543.9	Pitpnm3	ENSMUST00000075258.6	protein_coding	-
chr11_71949098_71950029	chr11	71949098	71950029	ENSMUSG00000040543.9	Pitpnm3	ENSMUST00000108508.2	protein_coding	-
chr11_71968049_71970503	chr11	71968049	71970503	ENSMUSG00000020807.8	4933427D14Rik	ENSMUST00000151411.1	processed_transcript	-
chr11_72019487_72021879	chr11	72019487	72021879	ENSMUSG00000020803.3	Txndc17	ENSMUST00000021158.3	protein_coding	+
chr11_72019487_72021879	chr11	72019487	72021879	ENSMUSG00000020803.3	Txndc17	ENSMUST00000128648.1	retained_intron	+
chr11_72019487_72021879	chr11	72019487	72021879	ENSMUSG00000020807.8	4933427D14Rik	ENSMUST00000154093.1	processed_transcript	-
chr11_72019487_72021879	chr11	72019487	72021879	ENSMUSG00000020807.8	4933427D14Rik	ENSMUST00000108505.1	protein_coding	-
chr11_72019487_72021879	chr11	72019487	72021879	ENSMUSG00000020807.8	4933427D14Rik	ENSMUST00000131546.1	nonsense_mediated_decay	-
chr11_72019487_72021879	chr11	72019487	72021879	ENSMUSG00000020807.8	4933427D14Rik	ENSMUST00000142530.1	nonsense_mediated_decay	-
chr11_72028086_72029555	chr11	72028086	72029555	ENSMUSG00000053574.4	4930563E22Rik	ENSMUST00000066087.3	processed_transcript	+
chr11_72028086_72029555	chr11	72028086	72029555	ENSMUSG00000053574.4	4930563E22Rik	ENSMUST00000124762.1	processed_transcript	+
chr11_72028086_72029555	chr11	72028086	72029555	ENSMUSG00000020801.8	Med31	ENSMUST00000129264.1	retained_intron	-
chr11_72028086_72029555	chr11	72028086	72029555	ENSMUSG00000020801.8	Med31	ENSMUST00000021157.8	protein_coding	-
chr11_72078907_72081234	chr11	72078907	72081234	ENSMUSG00000086951.1	1700051A21Rik	ENSMUST00000147937.1	processed_transcript	+
chr11_72078907_72081234	chr11	72078907	72081234	ENSMUSG00000086951.1	1700051A21Rik	ENSMUST00000154739.1	processed_transcript	+
chr11_72078907_72081234	chr11	72078907	72081234	ENSMUSG00000020805.7	Slc13a5	ENSMUST00000137701.1	protein_coding	-
chr11_72078907_72081234	chr11	72078907	72081234	ENSMUSG00000020805.7	Slc13a5	ENSMUST00000140167.1	protein_coding	-
chr11_72078907_72081234	chr11	72078907	72081234	ENSMUSG00000020805.7	Slc13a5	ENSMUST00000021161.6	protein_coding	-
chr11_72094016_72096151	chr11	72094016	72096151	ENSMUSG00000084599.1	n-R5s70	ENSMUST00000122650.1	rRNA	+
chr11_72114352_72116420	chr11	72114352	72116420	ENSMUSG00000040483.9	Xaf1	ENSMUST00000151440.1	protein_coding	+
chr11_72114352_72116420	chr11	72114352	72116420	ENSMUSG00000040483.9	Xaf1	ENSMUST00000146233.1	protein_coding	+
chr11_72114352_72116420	chr11	72114352	72116420	ENSMUSG00000040483.9	Xaf1	ENSMUST00000140842.2	protein_coding	+
chr11_72114352_72116420	chr11	72114352	72116420	ENSMUSG00000040483.9	Xaf1	ENSMUST00000094041.3	nonsense_mediated_decay	+
chr11_72114352_72116420	chr11	72114352	72116420	ENSMUSG00000040483.9	Xaf1	ENSMUST00000142921.1	retained_intron	+
chr11_72127448_72128497	chr11	72127448	72128497	ENSMUSG00000070388.3	Fbxo39	ENSMUST00000108504.1	protein_coding	+
chr11_72174820_72175925	chr11	72174820	72175925	ENSMUSG00000020799.9	Tekt1	ENSMUST00000021155.3	protein_coding	-
chr11_72174820_72175925	chr11	72174820	72175925	ENSMUSG00000020799.9	Tekt1	ENSMUST00000050911.7	protein_coding	-
chr11_72174820_72175925	chr11	72174820	72175925	ENSMUSG00000020799.9	Tekt1	ENSMUST00000108502.1	protein_coding	-
chr11_72174820_72175925	chr11	72174820	72175925	ENSMUSG00000020799.9	Tekt1	ENSMUST00000108503.2	protein_coding	-
chr11_72223921_72225485	chr11	72223921	72225485	ENSMUSG00000045667.7	Smtnl2	ENSMUST00000050226.6	protein_coding	-
chr11_72223921_72225485	chr11	72223921	72225485	ENSMUSG00000045667.7	Smtnl2	ENSMUST00000054338.5	protein_coding	-
chr11_72223921_72225485	chr11	72223921	72225485	ENSMUSG00000045667.7	Smtnl2	ENSMUST00000108500.1	protein_coding	-
chr11_72248190_72251173	chr11	72248190	72251173	ENSMUSG00000040471.10	Ggt6	ENSMUST00000076443.3	protein_coding	+
chr11_72248190_72251173	chr11	72248190	72251173	ENSMUSG00000040471.10	Ggt6	ENSMUST00000108499.1	protein_coding	+
chr11_72248190_72251173	chr11	72248190	72251173	ENSMUSG00000040471.10	Ggt6	ENSMUST00000169015.1	protein_coding	+
chr11_72248190_72251173	chr11	72248190	72251173	ENSMUSG00000040471.10	Ggt6	ENSMUST00000100903.2	protein_coding	+
chr11_72254195_72255500	chr11	72254195	72255500	ENSMUSG00000040463.9	Mybbp1a	ENSMUST00000045633.5	protein_coding	+
chr11_72254195_72255500	chr11	72254195	72255500	ENSMUSG00000040463.9	Mybbp1a	ENSMUST00000152894.1	retained_intron	+
chr11_72254195_72255500	chr11	72254195	72255500	ENSMUSG00000040463.9	Mybbp1a	ENSMUST00000100899.4	protein_coding	+
chr11_72254195_72255500	chr11	72254195	72255500	ENSMUSG00000040463.9	Mybbp1a	ENSMUST00000162048.1	retained_intron	+
chr11_72254195_72255500	chr11	72254195	72255500	ENSMUSG00000040463.9	Mybbp1a	ENSMUST00000156833.1	retained_intron	+
chr11_72267908_72268429	chr11	72267908	72268429	ENSMUSG00000040447.8	Spns2	ENSMUST00000129274.1	retained_intron	-
chr11_72269050_72269754	chr11	72269050	72269754	ENSMUSG00000040447.8	Spns2	ENSMUST00000150491.1	processed_transcript	-
chr11_72287017_72289389	chr11	72287017	72289389	ENSMUSG00000040447.8	Spns2	ENSMUST00000147418.1	processed_transcript	-
chr11_72303268_72304214	chr11	72303268	72304214	ENSMUSG00000040447.8	Spns2	ENSMUST00000169973.1	protein_coding	-
chr11_72303268_72304214	chr11	72303268	72304214	ENSMUSG00000040447.8	Spns2	ENSMUST00000092941.4	protein_coding	-
chr11_72303268_72304214	chr11	72303268	72304214	ENSMUSG00000040447.8	Spns2	ENSMUST00000045303.3	protein_coding	-
chr11_72315003_72316247	chr11	72315003	72316247	ENSMUSG00000020798.8	Spns3	ENSMUST00000155774.1	processed_transcript	-
chr11_72362997_72364497	chr11	72362997	72364497	ENSMUSG00000020798.8	Spns3	ENSMUST00000021154.6	protein_coding	-
chr11_72362997_72364497	chr11	72362997	72364497	ENSMUSG00000020798.8	Spns3	ENSMUST00000092940.6	protein_coding	-
chr11_72420063_72422412	chr11	72420063	72422412	ENSMUSG00000020794.7	Ube2g1	ENSMUST00000021148.6	protein_coding	+
chr11_72420063_72422412	chr11	72420063	72422412	ENSMUSG00000020794.7	Ube2g1	ENSMUST00000138247.1	nonsense_mediated_decay	+
chr11_72420063_72422412	chr11	72420063	72422412	ENSMUSG00000020794.7	Ube2g1	ENSMUST00000126046.1	retained_intron	+
chr11_72502585_72504398	chr11	72502585	72504398	ENSMUSG00000020790.8	Ankfy1	ENSMUST00000127610.1	nonsense_mediated_decay	+
chr11_72502585_72504398	chr11	72502585	72504398	ENSMUSG00000020790.8	Ankfy1	ENSMUST00000155998.1	protein_coding	+
chr11_72502585_72504398	chr11	72502585	72504398	ENSMUSG00000020790.8	Ankfy1	ENSMUST00000150172.1	retained_intron	+
chr11_72525561_72526875	chr11	72525561	72526875	ENSMUSG00000020790.8	Ankfy1	ENSMUST00000102548.4	processed_transcript	+
chr11_72577535_72578309	chr11	72577535	72578309	ENSMUSG00000020790.8	Ankfy1	ENSMUST00000132889.1	retained_intron	+
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000055670.7	Zzef1	ENSMUST00000150551.1	retained_intron	+
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000055670.7	Zzef1	ENSMUST00000172220.1	protein_coding	+
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000055670.7	Zzef1	ENSMUST00000069395.5	protein_coding	+
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000057778.7	Cyb5d2	ENSMUST00000169476.1	retained_intron	-
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000057778.7	Cyb5d2	ENSMUST00000141141.1	processed_transcript	-
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000057778.7	Cyb5d2	ENSMUST00000156294.1	protein_coding	-
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000057778.7	Cyb5d2	ENSMUST00000087640.4	protein_coding	-
chr11_72608669_72610596	chr11	72608669	72610596	ENSMUSG00000057778.7	Cyb5d2	ENSMUST00000079681.5	protein_coding	-
chr11_72773591_72775806	chr11	72773591	72775806	ENSMUSG00000020788.9	Atp2a3	ENSMUST00000108486.1	protein_coding	+
chr11_72773591_72775806	chr11	72773591	72775806	ENSMUSG00000020788.9	Atp2a3	ENSMUST00000108484.1	protein_coding	+
chr11_72773591_72775806	chr11	72773591	72775806	ENSMUSG00000020788.9	Atp2a3	ENSMUST00000021142.7	protein_coding	+
chr11_72773591_72775806	chr11	72773591	72775806	ENSMUSG00000020788.9	Atp2a3	ENSMUST00000108485.2	protein_coding	+
chr11_72773591_72775806	chr11	72773591	72775806	ENSMUSG00000020788.9	Atp2a3	ENSMUST00000163326.1	protein_coding	+
chr11_72773591_72775806	chr11	72773591	72775806	ENSMUSG00000020788.9	Atp2a3	ENSMUST00000149493.1	retained_intron	+
chr11_72812086_72812711	chr11	72812086	72812711	ENSMUSG00000020787.8	P2rx1	ENSMUST00000021141.7	protein_coding	+
chr11_72812086_72812711	chr11	72812086	72812711	ENSMUSG00000020787.8	P2rx1	ENSMUST00000092938.4	protein_coding	+
chr11_72822266_72823711	chr11	72822266	72823711	ENSMUSG00000020787.8	P2rx1	ENSMUST00000148964.1	retained_intron	+
chr11_72831931_72833535	chr11	72831931	72833535	ENSMUSG00000020785.11	Camkk1	ENSMUST00000155720.1	retained_intron	+
chr11_72831931_72833535	chr11	72831931	72833535	ENSMUSG00000020785.11	Camkk1	ENSMUST00000092937.6	protein_coding	+
chr11_72831931_72833535	chr11	72831931	72833535	ENSMUSG00000086943.1	4732414G09Rik	ENSMUST00000156243.1	processed_transcript	-
chr11_72860870_72863177	chr11	72860870	72863177	ENSMUSG00000020783.7	1200014J11Rik	ENSMUST00000021135.3	protein_coding	+
chr11_72860870_72863177	chr11	72860870	72863177	ENSMUSG00000020783.7	1200014J11Rik	ENSMUST00000144262.1	retained_intron	+
chr11_72860870_72863177	chr11	72860870	72863177	ENSMUSG00000020783.7	1200014J11Rik	ENSMUST00000151823.1	retained_intron	+
chr11_72904164_72904942	chr11	72904164	72904942	ENSMUSG00000005947.5	Itgae	ENSMUST00000102537.3	protein_coding	+
chr11_72904164_72904942	chr11	72904164	72904942	ENSMUSG00000005947.5	Itgae	ENSMUST00000006101.3	protein_coding	+
chr11_72950542_72952826	chr11	72950542	72952826	ENSMUSG00000050107.2	Gsg2	ENSMUST00000052140.2	protein_coding	-
chr11_72973336_72975330	chr11	72973336	72975330	ENSMUSG00000005950.8	P2rx5	ENSMUST00000006104.3	protein_coding	+
chr11_72973336_72975330	chr11	72973336	72975330	ENSMUSG00000005950.8	P2rx5	ENSMUST00000135202.1	protein_coding	+
chr11_72973336_72975330	chr11	72973336	72975330	ENSMUSG00000005950.8	P2rx5	ENSMUST00000136894.1	protein_coding	+
chr11_72989147_72991946	chr11	72989147	72991946	ENSMUSG00000040158.6	Tax1bp3	ENSMUST00000040687.5	protein_coding	+
chr11_72989147_72991946	chr11	72989147	72991946	ENSMUSG00000047260.4	Tmem93	ENSMUST00000108480.1	protein_coding	-
chr11_72989147_72991946	chr11	72989147	72991946	ENSMUSG00000047260.4	Tmem93	ENSMUST00000054952.3	protein_coding	-
chr11_72989147_72991946	chr11	72989147	72991946	ENSMUSG00000040158.6	Tax1bp3	ENSMUST00000133922.1	processed_transcript	+
chr11_72989147_72991946	chr11	72989147	72991946	ENSMUSG00000040158.6	Tax1bp3	ENSMUST00000150407.1	retained_intron	+
chr11_72989147_72991946	chr11	72989147	72991946	ENSMUSG00000040158.6	Tax1bp3	ENSMUST00000108477.1	protein_coding	+
chr11_73012065_73013714	chr11	73012065	73013714	ENSMUSG00000005951.6	Shpk	ENSMUST00000131927.1	nonsense_mediated_decay	+
chr11_73012065_73013714	chr11	73012065	73013714	ENSMUSG00000005951.6	Shpk	ENSMUST00000006105.6	protein_coding	+
chr11_73012065_73013714	chr11	73012065	73013714	ENSMUSG00000005949.3	Ctns	ENSMUST00000150468.1	processed_transcript	-
chr11_73012065_73013714	chr11	73012065	73013714	ENSMUSG00000005949.3	Ctns	ENSMUST00000144658.1	retained_intron	-
chr11_73012065_73013714	chr11	73012065	73013714	ENSMUSG00000005949.3	Ctns	ENSMUST00000108476.1	protein_coding	-
chr11_73012065_73013714	chr11	73012065	73013714	ENSMUSG00000005949.3	Ctns	ENSMUST00000006103.2	protein_coding	-
chr11_73039428_73039693	chr11	73039428	73039693	ENSMUSG00000082405.1	Gm16021	ENSMUST00000121176.1	transcribed_processed_pseudogene	-
chr11_73080592_73081116	chr11	73080592	73081116	ENSMUSG00000043029.2	Trpv3	ENSMUST00000049676.2	protein_coding	+
chr11_73137483_73138571	chr11	73137483	73138571	ENSMUSG00000020774.2	Aspa	ENSMUST00000141898.1	nonsense_mediated_decay	-
chr11_73137483_73138571	chr11	73137483	73138571	ENSMUSG00000020774.2	Aspa	ENSMUST00000132774.1	retained_intron	-
chr11_73137483_73138571	chr11	73137483	73138571	ENSMUSG00000020774.2	Aspa	ENSMUST00000021119.2	protein_coding	-
chr11_73139828_73140492	chr11	73139828	73140492	ENSMUSG00000020774.2	Aspa	ENSMUST00000134079.1	protein_coding	-
chr11_73139828_73140492	chr11	73139828	73140492	ENSMUSG00000020774.2	Aspa	ENSMUST00000155630.1	processed_transcript	-
chr11_73142609_73143710	chr11	73142609	73143710	ENSMUSG00000069825.5	Spata22	ENSMUST00000092926.4	protein_coding	+
chr11_73142609_73143710	chr11	73142609	73143710	ENSMUSG00000069825.5	Spata22	ENSMUST00000117445.1	protein_coding	+
chr11_73797706_73797924	chr11	73797706	73797924	ENSMUSG00000049041.4	Olfr398	ENSMUST00000053874.1	protein_coding	-
chr11_74402306_74404553	chr11	74402306	74404553	ENSMUSG00000038807.10	Rap1gap2	ENSMUST00000145524.1	protein_coding	-
chr11_74402306_74404553	chr11	74402306	74404553	ENSMUSG00000038807.10	Rap1gap2	ENSMUST00000047488.7	protein_coding	-
chr11_74402306_74404553	chr11	74402306	74404553	ENSMUSG00000038807.10	Rap1gap2	ENSMUST00000102521.1	protein_coding	-
chr11_74432543_74434472	chr11	74432543	74434472	ENSMUSG00000069814.5	E130309D14Rik	ENSMUST00000100866.2	protein_coding	+
chr11_74432543_74434472	chr11	74432543	74434472	ENSMUSG00000069814.5	E130309D14Rik	ENSMUST00000092916.5	protein_coding	+
chr11_74462306_74464354	chr11	74462306	74464354	ENSMUSG00000020741.10	1300001I01Rik	ENSMUST00000130398.1	processed_transcript	+
chr11_74462306_74464354	chr11	74462306	74464354	ENSMUSG00000020741.10	1300001I01Rik	ENSMUST00000164668.1	protein_coding	+
chr11_74462306_74464354	chr11	74462306	74464354	ENSMUSG00000020741.10	1300001I01Rik	ENSMUST00000092915.5	protein_coding	+
chr11_74462306_74464354	chr11	74462306	74464354	ENSMUSG00000020741.10	1300001I01Rik	ENSMUST00000117818.1	protein_coding	+
chr11_74462306_74464354	chr11	74462306	74464354	ENSMUSG00000020741.10	1300001I01Rik	ENSMUST00000155558.1	retained_intron	+
chr11_74462306_74464354	chr11	74462306	74464354	ENSMUSG00000020741.10	1300001I01Rik	ENSMUST00000127679.1	processed_transcript	+
chr11_74536448_74538534	chr11	74536448	74538534	ENSMUSG00000020745.9	Pafah1b1	ENSMUST00000155493.1	protein_coding	-
chr11_74536448_74538534	chr11	74536448	74538534	ENSMUSG00000020745.9	Pafah1b1	ENSMUST00000102520.2	protein_coding	-
chr11_74536448_74538534	chr11	74536448	74538534	ENSMUSG00000020745.9	Pafah1b1	ENSMUST00000156794.1	retained_intron	-
chr11_74536448_74538534	chr11	74536448	74538534	ENSMUSG00000020745.9	Pafah1b1	ENSMUST00000021091.8	protein_coding	-
chr11_74536448_74538534	chr11	74536448	74538534	ENSMUSG00000020745.9	Pafah1b1	ENSMUST00000126341.1	retained_intron	-
chr11_74583785_74585028	chr11	74583785	74585028	ENSMUSG00000010554.7	Mettl16	ENSMUST00000141755.1	protein_coding	+
chr11_74583785_74585028	chr11	74583785	74585028	ENSMUSG00000010554.7	Mettl16	ENSMUST00000010698.6	protein_coding	+
chr11_74583785_74585028	chr11	74583785	74585028	ENSMUSG00000010554.7	Mettl16	ENSMUST00000100858.2	protein_coding	+
chr11_74583785_74585028	chr11	74583785	74585028	ENSMUSG00000010554.7	Mettl16	ENSMUST00000128504.1	protein_coding	+
chr11_74583785_74585028	chr11	74583785	74585028	ENSMUSG00000010554.7	Mettl16	ENSMUST00000092912.5	nonsense_mediated_decay	+
chr11_74620643_74622578	chr11	74620643	74622578	ENSMUSG00000010554.7	Mettl16	ENSMUST00000134571.1	processed_transcript	+
chr11_74643274_74644556	chr11	74643274	74644556	ENSMUSG00000000282.6	Mnt	ENSMUST00000000291.2	protein_coding	+
chr11_74650868_74652936	chr11	74650868	74652936	ENSMUSG00000000282.6	Mnt	ENSMUST00000132150.1	protein_coding	+
chr11_74673466_74673937	chr11	74673466	74673937	ENSMUSG00000038351.8	Sgsm2	ENSMUST00000123573.1	retained_intron	-
chr11_74679930_74681984	chr11	74679930	74681984	ENSMUSG00000038351.8	Sgsm2	ENSMUST00000148421.1	retained_intron	-
chr11_74709523_74712447	chr11	74709523	74712447	ENSMUSG00000038351.8	Sgsm2	ENSMUST00000081799.5	protein_coding	-
chr11_74709523_74712447	chr11	74709523	74712447	ENSMUSG00000038351.8	Sgsm2	ENSMUST00000057631.5	protein_coding	-
chr11_74709523_74712447	chr11	74709523	74712447	ENSMUSG00000038335.7	Tsr1	ENSMUST00000155702.1	nonsense_mediated_decay	+
chr11_74709523_74712447	chr11	74709523	74712447	ENSMUSG00000038335.7	Tsr1	ENSMUST00000045807.7	protein_coding	+
chr11_74709523_74712447	chr11	74709523	74712447	ENSMUSG00000038335.7	Tsr1	ENSMUST00000155785.1	retained_intron	+
chr11_74709523_74712447	chr11	74709523	74712447	ENSMUSG00000038335.7	Tsr1	ENSMUST00000128230.1	nonsense_mediated_decay	+
chr11_74715123_74715386	chr11	74715123	74715386	ENSMUSG00000038335.7	Tsr1	ENSMUST00000144019.1	retained_intron	+
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000038290.9	Smg6	ENSMUST00000045281.6	protein_coding	+
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000138612.1	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000147817.1	retained_intron	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000135587.1	retained_intron	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000123855.1	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000128556.1	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000108447.1	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000121738.1	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000071240.5	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000108448.1	protein_coding	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000127499.1	processed_transcript	-
chr11_74738638_74740594	chr11	74738638	74740594	ENSMUSG00000001323.10	Srr	ENSMUST00000065211.2	protein_coding	-
chr11_74802262_74803031	chr11	74802262	74803031	ENSMUSG00000038290.9	Smg6	ENSMUST00000135522.1	retained_intron	+
chr11_74945717_74946733	chr11	74945717	74946733	ENSMUSG00000038290.9	Smg6	ENSMUST00000142038.1	processed_transcript	+
chr11_74972980_74973425	chr11	74972980	74973425	ENSMUSG00000038290.9	Smg6	ENSMUST00000153226.1	processed_transcript	+
chr11_74981568_74981786	chr11	74981568	74981786	ENSMUSG00000043099.4	Hic1	ENSMUST00000131720.1	processed_transcript	-
chr11_74982550_74982895	chr11	74982550	74982895	ENSMUSG00000043099.4	Hic1	ENSMUST00000055619.4	protein_coding	-
chr11_74985652_74985912	chr11	74985652	74985912	ENSMUSG00000085609.1	1700016P03Rik	ENSMUST00000134252.1	processed_transcript	+
chr11_74985915_74987655	chr11	74985915	74987655	ENSMUSG00000085609.1	1700016P03Rik	ENSMUST00000134252.1	processed_transcript	+
chr11_74985915_74987655	chr11	74985915	74987655	ENSMUSG00000065590.1	Mir212	ENSMUST00000083656.1	miRNA	+
chr11_74985915_74987655	chr11	74985915	74987655	ENSMUSG00000065537.1	Mir132	ENSMUST00000083603.1	miRNA	+
chr11_74992063_74992917	chr11	74992063	74992917	ENSMUSG00000038268.4	Ovca2	ENSMUST00000123489.1	processed_transcript	-
chr11_74992063_74992917	chr11	74992063	74992917	ENSMUSG00000038268.4	Ovca2	ENSMUST00000071562.2	protein_coding	-
chr11_75003120_75004478	chr11	75003120	75004478	ENSMUSG00000078789.3	Dph1	ENSMUST00000044949.4	protein_coding	-
chr11_75006281_75007711	chr11	75006281	75007711	ENSMUSG00000045287.6	Rtn4rl1	ENSMUST00000102514.3	protein_coding	+
chr11_75161475_75162697	chr11	75161475	75162697	ENSMUSG00000018809.2	Smyd4	ENSMUST00000044530.2	protein_coding	+
chr11_75161475_75162697	chr11	75161475	75162697	ENSMUSG00000018809.2	Smyd4	ENSMUST00000157055.1	retained_intron	+
chr11_75161475_75162697	chr11	75161475	75162697	ENSMUSG00000000751.7	Rpa1	ENSMUST00000149365.1	processed_transcript	-
chr11_75161475_75162697	chr11	75161475	75162697	ENSMUSG00000000751.7	Rpa1	ENSMUST00000154894.1	retained_intron	-
chr11_75161475_75162697	chr11	75161475	75162697	ENSMUSG00000000751.7	Rpa1	ENSMUST00000000767.5	protein_coding	-
chr11_75161475_75162697	chr11	75161475	75162697	ENSMUSG00000000751.7	Rpa1	ENSMUST00000092907.5	protein_coding	-
chr11_75212401_75213490	chr11	75212401	75213490	ENSMUSG00000018809.2	Smyd4	ENSMUST00000135774.1	processed_transcript	+
chr11_75228291_75229292	chr11	75228291	75229292	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000139403.1	retained_intron	-
chr11_75228291_75229292	chr11	75228291	75229292	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000167281.1	nonsense_mediated_decay	-
chr11_75229349_75230169	chr11	75229349	75230169	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000167281.1	nonsense_mediated_decay	-
chr11_75234552_75237089	chr11	75234552	75237089	ENSMUSG00000085359.1	Gm12336	ENSMUST00000125962.1	lincRNA	-
chr11_75234552_75237089	chr11	75234552	75237089	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000125982.1	protein_coding	-
chr11_75234552_75237089	chr11	75234552	75237089	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000137103.1	protein_coding	-
chr11_75234552_75237089	chr11	75234552	75237089	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000138661.1	protein_coding	-
chr11_75234552_75237089	chr11	75234552	75237089	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000094022.4	protein_coding	-
chr11_75234552_75237089	chr11	75234552	75237089	ENSMUSG00000000753.8	Serpinf1	ENSMUST00000000769.7	protein_coding	-
chr11_75252276_75252703	chr11	75252276	75252703	ENSMUSG00000038224.6	Serpinf2	ENSMUST00000108437.1	protein_coding	-
chr11_75252746_75253390	chr11	75252746	75253390	ENSMUSG00000038224.6	Serpinf2	ENSMUST00000142094.1	nonsense_mediated_decay	-
chr11_75252746_75253390	chr11	75252746	75253390	ENSMUSG00000038224.6	Serpinf2	ENSMUST00000128330.1	protein_coding	-
chr11_75252746_75253390	chr11	75252746	75253390	ENSMUSG00000038224.6	Serpinf2	ENSMUST00000043696.2	protein_coding	-
chr11_75263291_75263559	chr11	75263291	75263559	ENSMUSG00000045374.11	Wdr81	ENSMUST00000135804.1	processed_transcript	-
chr11_75267504_75269198	chr11	75267504	75269198	ENSMUSG00000045374.11	Wdr81	ENSMUST00000117392.2	protein_coding	-
chr11_75267504_75269198	chr11	75267504	75269198	ENSMUSG00000045374.11	Wdr81	ENSMUST00000173320.1	protein_coding	-
chr11_75267504_75269198	chr11	75267504	75269198	ENSMUSG00000045374.11	Wdr81	ENSMUST00000100845.3	protein_coding	-
chr11_75273536_75275326	chr11	75273536	75275326	ENSMUSG00000085148.1	2210403K04Rik	ENSMUST00000149940.1	processed_transcript	+
chr11_75273536_75275326	chr11	75273536	75275326	ENSMUSG00000085148.1	2210403K04Rik	ENSMUST00000134345.1	processed_transcript	+
chr11_75273536_75275326	chr11	75273536	75275326	ENSMUSG00000038217.7	Tlcd2	ENSMUST00000124718.1	processed_transcript	+
chr11_75281074_75282541	chr11	75281074	75282541	ENSMUSG00000038217.7	Tlcd2	ENSMUST00000043598.7	protein_coding	+
chr11_75281074_75282541	chr11	75281074	75282541	ENSMUSG00000038217.7	Tlcd2	ENSMUST00000108435.1	protein_coding	+
chr11_75281074_75282541	chr11	75281074	75282541	ENSMUSG00000038217.7	Tlcd2	ENSMUST00000153236.1	retained_intron	+
chr11_75299680_75301210	chr11	75299680	75301210	ENSMUSG00000020850.7	Prpf8	ENSMUST00000100843.2	protein_coding	+
chr11_75299680_75301210	chr11	75299680	75301210	ENSMUSG00000020850.7	Prpf8	ENSMUST00000018449.4	protein_coding	+
chr11_75299680_75301210	chr11	75299680	75301210	ENSMUSG00000020850.7	Prpf8	ENSMUST00000102510.1	protein_coding	+
chr11_75299680_75301210	chr11	75299680	75301210	ENSMUSG00000020850.7	Prpf8	ENSMUST00000131283.1	protein_coding	+
chr11_75322971_75324995	chr11	75322971	75324995	ENSMUSG00000038195.6	Rilp	ENSMUST00000042972.6	protein_coding	+
chr11_75322971_75324995	chr11	75322971	75324995	ENSMUSG00000038195.6	Rilp	ENSMUST00000156923.1	retained_intron	+
chr11_75326856_75327204	chr11	75326856	75327204	ENSMUSG00000038188.10	Scarf1	ENSMUST00000042808.6	protein_coding	+
chr11_75326856_75327204	chr11	75326856	75327204	ENSMUSG00000038188.10	Scarf1	ENSMUST00000118243.1	protein_coding	+
chr11_75326856_75327204	chr11	75326856	75327204	ENSMUSG00000038188.10	Scarf1	ENSMUST00000071964.5	protein_coding	+
chr11_75326856_75327204	chr11	75326856	75327204	ENSMUSG00000038188.10	Scarf1	ENSMUST00000123819.1	nonsense_mediated_decay	+
chr11_75343877_75347055	chr11	75343877	75347055	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000149727.1	protein_coding	+
chr11_75343877_75347055	chr11	75343877	75347055	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000042561.7	protein_coding	+
chr11_75343877_75347055	chr11	75343877	75347055	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000108433.1	protein_coding	+
chr11_75343877_75347055	chr11	75343877	75347055	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000143035.1	protein_coding	+
chr11_75343877_75347055	chr11	75343877	75347055	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000127226.1	protein_coding	+
chr11_75343877_75347055	chr11	75343877	75347055	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000100839.3	protein_coding	+
chr11_75350864_75352765	chr11	75350864	75352765	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000152775.1	processed_transcript	+
chr11_75364629_75366171	chr11	75364629	75366171	ENSMUSG00000093100.1	AL591496.1	ENSMUST00000175359.1	miRNA	+
chr11_75373363_75375520	chr11	75373363	75375520	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000151891.1	retained_intron	+
chr11_75379072_75380460	chr11	75379072	75380460	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000145901.1	processed_transcript	+
chr11_75379072_75380460	chr11	75379072	75380460	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000134112.1	retained_intron	+
chr11_75379072_75380460	chr11	75379072	75380460	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000155981.1	processed_transcript	+
chr11_75379072_75380460	chr11	75379072	75380460	ENSMUSG00000038178.9	Slc43a2	ENSMUST00000169547.1	protein_coding	+
chr11_75400848_75402683	chr11	75400848	75402683	ENSMUSG00000017781.10	Pitpna	ENSMUST00000143219.1	protein_coding	+
chr11_75400848_75402683	chr11	75400848	75402683	ENSMUSG00000017781.10	Pitpna	ENSMUST00000140841.1	retained_intron	+
chr11_75400848_75402683	chr11	75400848	75402683	ENSMUSG00000017781.10	Pitpna	ENSMUST00000102509.4	nonsense_mediated_decay	+
chr11_75407596_75408694	chr11	75407596	75408694	ENSMUSG00000085088.1	4931413K12Rik	ENSMUST00000142068.1	processed_transcript	-
chr11_75433539_75434585	chr11	75433539	75434585	ENSMUSG00000017781.10	Pitpna	ENSMUST00000153768.1	processed_transcript	+
chr11_75443865_75445427	chr11	75443865	75445427	ENSMUSG00000006127.3	Inpp5k	ENSMUST00000006286.2	protein_coding	+
chr11_75443865_75445427	chr11	75443865	75445427	ENSMUSG00000006127.3	Inpp5k	ENSMUST00000136605.1	retained_intron	+
chr11_75443865_75445427	chr11	75443865	75445427	ENSMUSG00000006127.3	Inpp5k	ENSMUST00000129298.1	retained_intron	+
chr11_75443865_75445427	chr11	75443865	75445427	ENSMUSG00000006127.3	Inpp5k	ENSMUST00000150857.1	nonsense_mediated_decay	+
chr11_75463937_75464150	chr11	75463937	75464150	ENSMUSG00000017774.12	Myo1c	ENSMUST00000102505.3	protein_coding	+
chr11_75463937_75464150	chr11	75463937	75464150	ENSMUSG00000017774.12	Myo1c	ENSMUST00000057572.7	protein_coding	+
chr11_75464562_75466375	chr11	75464562	75466375	ENSMUSG00000017774.12	Myo1c	ENSMUST00000069057.6	protein_coding	+
chr11_75464562_75466375	chr11	75464562	75466375	ENSMUSG00000017774.12	Myo1c	ENSMUST00000102504.3	protein_coding	+
chr11_75469020_75469761	chr11	75469020	75469761	ENSMUSG00000017774.12	Myo1c	ENSMUST00000108431.2	protein_coding	+
chr11_75469020_75469761	chr11	75469020	75469761	ENSMUSG00000017774.12	Myo1c	ENSMUST00000151174.1	retained_intron	+
chr11_75469020_75469761	chr11	75469020	75469761	ENSMUSG00000017774.12	Myo1c	ENSMUST00000136935.1	protein_coding	+
chr11_75474521_75475431	chr11	75474521	75475431	ENSMUSG00000017774.12	Myo1c	ENSMUST00000148659.1	retained_intron	+
chr11_75492118_75493745	chr11	75492118	75493745	ENSMUSG00000017776.8	Crk	ENSMUST00000017920.7	protein_coding	+
chr11_75492118_75493745	chr11	75492118	75493745	ENSMUSG00000017776.8	Crk	ENSMUST00000108426.1	protein_coding	+
chr11_75492118_75493745	chr11	75492118	75493745	ENSMUSG00000017776.8	Crk	ENSMUST00000108425.1	protein_coding	+
chr11_75492118_75493745	chr11	75492118	75493745	ENSMUSG00000017776.8	Crk	ENSMUST00000168066.1	protein_coding	+
chr11_75492118_75493745	chr11	75492118	75493745	ENSMUSG00000017776.8	Crk	ENSMUST00000093115.3	protein_coding	+
chr11_75492118_75493745	chr11	75492118	75493745	ENSMUSG00000017776.8	Crk	ENSMUST00000147718.1	protein_coding	+
chr11_75545922_75547648	chr11	75545922	75547648	ENSMUSG00000020849.7	Ywhae	ENSMUST00000067664.3	protein_coding	+
chr11_75545922_75547648	chr11	75545922	75547648	ENSMUSG00000020849.7	Ywhae	ENSMUST00000134745.1	nonsense_mediated_decay	+
chr11_75545922_75547648	chr11	75545922	75547648	ENSMUSG00000020849.7	Ywhae	ENSMUST00000153038.1	retained_intron	+
chr11_75545922_75547648	chr11	75545922	75547648	ENSMUSG00000020849.7	Ywhae	ENSMUST00000131398.1	protein_coding	+
chr11_75564676_75565113	chr11	75564676	75565113	ENSMUSG00000020849.7	Ywhae	ENSMUST00000155057.1	retained_intron	+
chr11_75608510_75608953	chr11	75608510	75608953	ENSMUSG00000087059.1	Gm12339	ENSMUST00000139361.1	antisense	+
chr11_75609417_75610608	chr11	75609417	75610608	ENSMUSG00000020848.7	Doc2b	ENSMUST00000021209.7	protein_coding	-
chr11_75739259_75740899	chr11	75739259	75740899	ENSMUSG00000020847.8	Rph3al	ENSMUST00000021208.4	protein_coding	-
chr11_75750686_75751486	chr11	75750686	75751486	ENSMUSG00000020847.8	Rph3al	ENSMUST00000108420.2	protein_coding	-
chr11_75750686_75751486	chr11	75750686	75751486	ENSMUSG00000020847.8	Rph3al	ENSMUST00000121287.1	protein_coding	-
chr11_75813081_75814935	chr11	75813081	75814935	ENSMUSG00000053783.5	1700016K19Rik	ENSMUST00000066408.5	protein_coding	+
chr11_75839741_75841908	chr11	75839741	75841908	ENSMUSG00000020846.6	Fam101b	ENSMUST00000021207.6	protein_coding	-
chr11_75957952_75958281	chr11	75957952	75958281	ENSMUSG00000080701.1	Gm12340	ENSMUST00000121617.1	transcribed_unprocessed_pseudogene	+
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000069808.7	Fam57a	ENSMUST00000129853.1	protein_coding	+
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000069808.7	Fam57a	ENSMUST00000127340.1	processed_transcript	+
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000129256.1	protein_coding	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000140886.2	processed_transcript	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000170730.1	protein_coding	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000170143.1	retained_intron	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000163878.1	nonsense_mediated_decay	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000166752.1	nonsense_mediated_decay	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000169734.1	nonsense_mediated_decay	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000167114.1	protein_coding	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000094015.4	protein_coding	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000108419.2	protein_coding	-
chr11_75992215_75993951	chr11	75992215	75993951	ENSMUSG00000017288.9	Vps53	ENSMUST00000056601.4	protein_coding	-
chr11_76014758_76016366	chr11	76014758	76016366	ENSMUSG00000069808.7	Fam57a	ENSMUST00000094014.3	protein_coding	+
chr11_76014758_76016366	chr11	76014758	76016366	ENSMUSG00000069808.7	Fam57a	ENSMUST00000130527.2	retained_intron	+
chr11_76014758_76016366	chr11	76014758	76016366	ENSMUSG00000069808.7	Fam57a	ENSMUST00000169560.1	protein_coding	+
chr11_76030082_76031503	chr11	76030082	76031503	ENSMUSG00000038057.4	Dbil5	ENSMUST00000040806.4	protein_coding	+
chr11_76030082_76031503	chr11	76030082	76031503	ENSMUSG00000049396.6	Gemin4	ENSMUST00000143822.1	nonsense_mediated_decay	-
chr11_76030082_76031503	chr11	76030082	76031503	ENSMUSG00000049396.6	Gemin4	ENSMUST00000102500.4	protein_coding	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000038046.4	Rnmtl1	ENSMUST00000040577.4	protein_coding	+
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000038046.4	Rnmtl1	ENSMUST00000125463.2	retained_intron	+
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000168055.1	protein_coding	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000170590.1	nonsense_mediated_decay	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000164022.1	protein_coding	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000170710.1	protein_coding	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000170017.1	nonsense_mediated_decay	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000017430.5	protein_coding	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000169701.1	protein_coding	-
chr11_76056339_76057954	chr11	76056339	76057954	ENSMUSG00000017286.9	Glod4	ENSMUST00000169532.1	retained_intron	-
chr11_76211596_76213832	chr11	76211596	76213832	ENSMUSG00000020844.6	Nxn	ENSMUST00000131472.1	processed_transcript	-
chr11_7